View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17755_high_56 (Length: 252)

Name: NF17755_high_56
Description: NF17755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17755_high_56
NF17755_high_56
[»] chr7 (42 HSPs)
chr7 (49-155)||(29737314-29737420)
chr7 (5-141)||(24395097-24395232)
chr7 (1-141)||(45637833-45637972)
chr7 (6-141)||(3962105-3962239)
chr7 (49-141)||(4974539-4974630)
chr7 (49-141)||(35445567-35445658)
chr7 (49-141)||(42696253-42696345)
chr7 (59-141)||(15238564-15238645)
chr7 (59-141)||(37476884-37476965)
chr7 (1-141)||(42611932-42612072)
chr7 (5-141)||(48880731-48880867)
chr7 (52-141)||(20009902-20009991)
chr7 (49-141)||(30848739-30848830)
chr7 (49-141)||(34483008-34483099)
chr7 (49-141)||(35876414-35876505)
chr7 (52-141)||(15577651-15577739)
chr7 (49-141)||(15329444-15329535)
chr7 (65-141)||(25167660-25167735)
chr7 (59-141)||(18037157-18037238)
chr7 (73-138)||(3961991-3962056)
chr7 (73-138)||(15329285-15329350)
chr7 (73-138)||(48880915-48880980)
chr7 (73-138)||(4974723-4974788)
chr7 (73-138)||(18036990-18037055)
chr7 (73-138)||(34482847-34482912)
chr7 (73-138)||(42611823-42611888)
chr7 (73-138)||(45637724-45637789)
chr7 (76-138)||(15577841-15577903)
chr7 (73-138)||(36790454-36790519)
chr7 (73-138)||(37477068-37477133)
chr7 (96-138)||(24394984-24395026)
chr7 (139-185)||(28885512-28885558)
chr7 (73-138)||(20010086-20010150)
chr7 (73-138)||(25167838-25167903)
chr7 (73-138)||(29737151-29737216)
chr7 (73-138)||(35444570-35444635)
chr7 (138-180)||(32553681-32553723)
chr7 (73-138)||(15238394-15238459)
chr7 (1-38)||(15577757-15577794)
chr7 (1-38)||(25167757-25167794)
chr7 (73-122)||(30848597-30848646)
chr7 (85-138)||(36790283-36790336)
[»] chr3 (57 HSPs)
chr3 (49-148)||(33839705-33839804)
chr3 (49-141)||(36864836-36864928)
chr3 (49-141)||(47738281-47738373)
chr3 (1-141)||(22426149-22426288)
chr3 (52-141)||(40328004-40328093)
chr3 (6-141)||(19650704-19650838)
chr3 (49-141)||(33145882-33145973)
chr3 (49-141)||(42921295-42921387)
chr3 (1-141)||(3456185-3456325)
chr3 (5-138)||(30385526-30385658)
chr3 (49-141)||(3137218-3137309)
chr3 (49-141)||(26612916-26613008)
chr3 (49-141)||(34482692-34482783)
chr3 (49-141)||(37522223-37522314)
chr3 (59-141)||(8361843-8361924)
chr3 (49-141)||(3089589-3089680)
chr3 (1-141)||(33113914-33114055)
chr3 (50-141)||(24343720-24343811)
chr3 (6-141)||(3574330-3574465)
chr3 (49-141)||(2754889-2754980)
chr3 (49-141)||(8320386-8320477)
chr3 (49-141)||(37216857-37216948)
chr3 (59-141)||(9796833-9796914)
chr3 (57-141)||(6042055-6042138)
chr3 (57-141)||(48161084-48161167)
chr3 (1-107)||(42297985-42298090)
chr3 (59-141)||(41224414-41224495)
chr3 (73-138)||(3574515-3574580)
chr3 (73-138)||(6041896-6041961)
chr3 (73-138)||(42297365-42297431)
chr3 (73-138)||(2754729-2754794)
chr3 (73-138)||(3456076-3456141)
chr3 (73-138)||(11347280-11347345)
chr3 (73-138)||(37217041-37217106)
chr3 (73-138)||(37522065-37522130)
chr3 (73-138)||(48160917-48160982)
chr3 (57-141)||(46919072-46919156)
chr3 (73-138)||(3137402-3137467)
chr3 (73-138)||(8320572-8320637)
chr3 (73-138)||(9797017-9797082)
chr3 (73-138)||(19650888-19650953)
chr3 (73-138)||(22426332-22426397)
chr3 (73-138)||(33839543-33839608)
chr3 (94-138)||(42921155-42921199)
chr3 (73-138)||(33113805-33113870)
chr3 (73-138)||(33145725-33145789)
chr3 (73-137)||(30385024-30385088)
chr3 (73-120)||(8362033-8362080)
chr3 (52-135)||(41883031-41883114)
chr3 (5-38)||(30385136-30385169)
chr3 (73-138)||(34482898-34482963)
chr3 (5-38)||(41883130-41883163)
chr3 (73-122)||(41883211-41883260)
chr3 (140-197)||(42380740-42380797)
chr3 (140-197)||(42409454-42409511)
chr3 (73-138)||(47738117-47738182)
chr3 (6-38)||(11347394-11347426)
[»] chr5 (42 HSPs)
chr5 (6-141)||(3521811-3521945)
chr5 (5-141)||(6043316-6043451)
chr5 (1-141)||(3362899-3363040)
chr5 (49-141)||(12614541-12614633)
chr5 (5-141)||(4892327-4892463)
chr5 (5-141)||(33584133-33584269)
chr5 (5-141)||(25398363-25398499)
chr5 (49-141)||(8145543-8145634)
chr5 (49-141)||(12850972-12851063)
chr5 (49-141)||(38899529-38899621)
chr5 (11-141)||(14138799-14138928)
chr5 (59-141)||(17545486-17545567)
chr5 (59-141)||(22912861-22912942)
chr5 (1-141)||(37321597-37321737)
chr5 (5-141)||(2477761-2477897)
chr5 (1-108)||(4433844-4433951)
chr5 (73-138)||(2477648-2477713)
chr5 (73-138)||(11361119-11361184)
chr5 (73-138)||(4892214-4892279)
chr5 (73-138)||(8145387-8145452)
chr5 (140-197)||(8564912-8564969)
chr5 (73-138)||(12614721-12614786)
chr5 (73-138)||(22913042-22913107)
chr5 (73-138)||(25398250-25398315)
chr5 (5-129)||(11360947-11361071)
chr5 (73-138)||(6043499-6043564)
chr5 (73-138)||(33584317-33584382)
chr5 (73-133)||(37321781-37321841)
chr5 (57-107)||(13664737-13664787)
chr5 (52-133)||(27481995-27482077)
chr5 (73-138)||(3362790-3362855)
chr5 (73-138)||(14138680-14138745)
chr5 (73-138)||(38899714-38899779)
chr5 (82-138)||(10458409-10458465)
chr5 (5-122)||(31640763-31640880)
chr5 (49-107)||(36880150-36880213)
chr5 (73-138)||(4433995-4434060)
chr5 (73-138)||(12850813-12850878)
chr5 (5-38)||(12850926-12850959)
chr5 (73-138)||(17545673-17545738)
chr5 (96-133)||(27481843-27481880)
chr5 (139-180)||(34547730-34547771)
[»] chr2 (42 HSPs)
chr2 (1-141)||(23267866-23268006)
chr2 (5-141)||(9293379-9293516)
chr2 (49-141)||(10662058-10662149)
chr2 (49-141)||(22592880-22592974)
chr2 (5-141)||(33380332-33380468)
chr2 (49-141)||(35160929-35161020)
chr2 (1-141)||(3989197-3989337)
chr2 (5-141)||(7475312-7475448)
chr2 (59-129)||(37335824-37335894)
chr2 (1-141)||(31174639-31174778)
chr2 (49-141)||(9723576-9723668)
chr2 (49-121)||(16767285-16767357)
chr2 (59-141)||(21393490-21393570)
chr2 (49-141)||(13355018-13355109)
chr2 (59-141)||(43331092-43331173)
chr2 (73-138)||(10661899-10661964)
chr2 (73-138)||(35160769-35160834)
chr2 (49-107)||(14941201-14941259)
chr2 (5-107)||(21936207-21936310)
chr2 (59-107)||(34320994-34321042)
chr2 (73-138)||(7475496-7475561)
chr2 (73-138)||(9293564-9293629)
chr2 (73-138)||(9723417-9723482)
chr2 (73-138)||(14941354-14941419)
chr2 (73-138)||(21393676-21393741)
chr2 (73-138)||(21936093-21936158)
chr2 (73-138)||(23268050-23268115)
chr2 (73-138)||(31174822-31174887)
chr2 (73-138)||(33380219-33380284)
chr2 (73-138)||(43330924-43330989)
chr2 (140-186)||(9154164-9154210)
chr2 (73-122)||(3989104-3989153)
chr2 (140-197)||(12457018-12457075)
chr2 (73-138)||(13354858-13354923)
chr2 (73-138)||(27847644-27847709)
chr2 (140-185)||(33810617-33810662)
chr2 (140-197)||(36887339-36887396)
chr2 (140-197)||(41877555-41877612)
chr2 (140-185)||(12890265-12890310)
chr2 (1-38)||(16767379-16767416)
chr2 (5-38)||(35160882-35160915)
chr2 (140-168)||(12457065-12457093)
[»] chr8 (64 HSPs)
chr8 (49-141)||(32064916-32065007)
chr8 (50-141)||(37132484-37132575)
chr8 (5-141)||(6108037-6108173)
chr8 (13-141)||(34665515-34665642)
chr8 (1-141)||(37985860-37985999)
chr8 (49-141)||(20091605-20091696)
chr8 (5-141)||(17841654-17841790)
chr8 (49-141)||(3596845-3596936)
chr8 (49-141)||(25581043-25581134)
chr8 (49-141)||(26041917-26042008)
chr8 (49-141)||(30055686-30055777)
chr8 (49-141)||(40779933-40780024)
chr8 (49-141)||(42754846-42754937)
chr8 (57-141)||(1503647-1503730)
chr8 (49-141)||(14129029-14129120)
chr8 (5-141)||(15187686-15187821)
chr8 (49-122)||(41819590-41819663)
chr8 (49-141)||(10044518-10044609)
chr8 (49-141)||(24211176-24211267)
chr8 (11-141)||(30834859-30834989)
chr8 (13-138)||(32393991-32394114)
chr8 (5-141)||(38017059-38017194)
chr8 (49-141)||(1645768-1645859)
chr8 (61-141)||(31347580-31347659)
chr8 (49-139)||(39772608-39772697)
chr8 (49-138)||(35353211-35353299)
chr8 (53-141)||(3890418-3890506)
chr8 (49-141)||(24844664-24844756)
chr8 (59-141)||(7017662-7017743)
chr8 (59-141)||(7022159-7022240)
chr8 (5-118)||(8453959-8454072)
chr8 (73-138)||(1645953-1646018)
chr8 (73-138)||(8453846-8453911)
chr8 (73-138)||(14128876-14128941)
chr8 (73-138)||(26042104-26042169)
chr8 (73-138)||(32064757-32064822)
chr8 (73-138)||(32393870-32393935)
chr8 (73-138)||(34665394-34665459)
chr8 (73-138)||(35353053-35353118)
chr8 (73-138)||(37986043-37986108)
chr8 (73-138)||(42755030-42755095)
chr8 (73-138)||(6108221-6108286)
chr8 (73-138)||(7021990-7022055)
chr8 (73-138)||(17841838-17841903)
chr8 (73-138)||(20091789-20091854)
chr8 (73-138)||(24844847-24844911)
chr8 (73-138)||(31347770-31347835)
chr8 (73-138)||(40780117-40780182)
chr8 (52-104)||(27835293-27835345)
chr8 (74-138)||(38016983-38017047)
chr8 (73-122)||(3817918-3817967)
chr8 (73-138)||(15187572-15187637)
chr8 (73-122)||(15972865-15972914)
chr8 (73-138)||(24211541-24211606)
chr8 (73-138)||(27782105-27782170)
chr8 (140-181)||(38125618-38125659)
chr8 (73-138)||(39772789-39772854)
chr8 (73-138)||(41819766-41819831)
chr8 (78-126)||(37132651-37132699)
chr8 (99-138)||(1886633-1886672)
chr8 (73-138)||(7017853-7017918)
chr8 (5-38)||(24211460-24211493)
chr8 (73-138)||(30835035-30835099)
chr8 (6-38)||(3890524-3890556)
[»] chr6 (39 HSPs)
chr6 (49-141)||(28675318-28675409)
chr6 (1-141)||(17705273-17705409)
chr6 (49-141)||(29693615-29693707)
chr6 (49-141)||(32702375-32702466)
chr6 (49-141)||(33696867-33696958)
chr6 (49-141)||(2309227-2309318)
chr6 (5-141)||(33695130-33695267)
chr6 (5-141)||(17175825-17175961)
chr6 (5-141)||(18365378-18365513)
chr6 (5-141)||(18370642-18370777)
chr6 (52-139)||(6031546-6031632)
chr6 (59-141)||(11548393-11548474)
chr6 (73-138)||(17705453-17705518)
chr6 (11-122)||(18889466-18889577)
chr6 (49-141)||(23290885-23290976)
chr6 (73-138)||(6127287-6127352)
chr6 (73-138)||(23291072-23291137)
chr6 (73-138)||(17176009-17176074)
chr6 (73-138)||(33695315-33695380)
chr6 (73-138)||(33696708-33696773)
chr6 (71-141)||(582531-582602)
chr6 (49-107)||(6127447-6127505)
chr6 (83-141)||(34238891-34238948)
chr6 (73-138)||(6031729-6031794)
chr6 (73-138)||(11548576-11548641)
chr6 (73-138)||(28675160-28675225)
chr6 (5-80)||(9752110-9752185)
chr6 (11-111)||(8515560-8515660)
chr6 (73-138)||(18365561-18365626)
chr6 (73-138)||(18370825-18370890)
chr6 (1-38)||(25987051-25987088)
chr6 (83-138)||(8515723-8515778)
chr6 (73-123)||(9752233-9752283)
chr6 (5-38)||(6031648-6031681)
chr6 (73-138)||(18889685-18889749)
chr6 (73-138)||(25986942-25987007)
chr6 (73-138)||(32702217-32702282)
chr6 (5-38)||(33696821-33696854)
chr6 (141-197)||(30416941-30416997)
[»] chr4 (61 HSPs)
chr4 (11-141)||(36073481-36073610)
chr4 (1-141)||(21802124-21802266)
chr4 (49-141)||(17655600-17655692)
chr4 (49-141)||(24128409-24128500)
chr4 (49-141)||(44893017-44893108)
chr4 (49-141)||(44893596-44893687)
chr4 (5-141)||(46441969-46442105)
chr4 (1-141)||(53123152-53123292)
chr4 (49-141)||(37219801-37219893)
chr4 (5-141)||(9088995-9089131)
chr4 (5-141)||(50156383-50156518)
chr4 (52-141)||(11314055-11314144)
chr4 (49-141)||(4751617-4751708)
chr4 (49-141)||(49387691-49387782)
chr4 (51-141)||(42671840-42671930)
chr4 (5-141)||(47290191-47290327)
chr4 (49-141)||(22199429-22199520)
chr4 (49-141)||(36073121-36073212)
chr4 (5-122)||(30563334-30563452)
chr4 (1-141)||(2624958-2625098)
chr4 (59-141)||(10442591-10442672)
chr4 (59-141)||(24392854-24392935)
chr4 (49-141)||(31078623-31078714)
chr4 (49-141)||(37934745-37934837)
chr4 (49-140)||(23964269-23964359)
chr4 (5-141)||(7744916-7745052)
chr4 (49-141)||(33530488-33530579)
chr4 (73-138)||(7745100-7745165)
chr4 (73-138)||(33530676-33530741)
chr4 (147-197)||(4473076-4473126)
chr4 (54-141)||(44744607-44744690)
chr4 (73-138)||(10442777-10442842)
chr4 (73-138)||(23964453-23964518)
chr4 (73-138)||(31078807-31078872)
chr4 (140-197)||(32564847-32564904)
chr4 (57-130)||(36073276-36073349)
chr4 (73-138)||(42671681-42671746)
chr4 (73-138)||(49387876-49387941)
chr4 (73-138)||(2624849-2624914)
chr4 (73-138)||(21802310-21802375)
chr4 (73-138)||(22199273-22199338)
chr4 (73-138)||(24392679-24392744)
chr4 (96-141)||(25063378-25063423)
chr4 (73-138)||(36072959-36073024)
chr4 (73-138)||(47290078-47290143)
chr4 (73-138)||(50156566-50156631)
chr4 (73-137)||(36073731-36073795)
chr4 (73-138)||(4751458-4751523)
chr4 (140-197)||(7209058-7209115)
chr4 (73-138)||(24128251-24128316)
chr4 (1-38)||(36073068-36073105)
chr4 (73-138)||(36073362-36073427)
chr4 (73-138)||(44893438-44893503)
chr4 (73-138)||(46441856-46441921)
chr4 (73-138)||(44893201-44893267)
chr4 (73-138)||(53123042-53123108)
chr4 (1-38)||(4751567-4751604)
chr4 (73-122)||(9088898-9088947)
chr4 (5-38)||(10442696-10442729)
chr4 (1-38)||(44744555-44744592)
chr4 (113-141)||(53998988-53999016)
[»] chr1 (43 HSPs)
chr1 (1-141)||(44094819-44094958)
chr1 (49-141)||(37821638-37821729)
chr1 (4-141)||(25973533-25973668)
chr1 (1-141)||(36966512-36966652)
chr1 (49-141)||(51737675-51737766)
chr1 (5-138)||(19015529-19015662)
chr1 (49-141)||(18404618-18404709)
chr1 (49-141)||(41876246-41876337)
chr1 (5-141)||(6883612-6883748)
chr1 (59-141)||(32000070-32000151)
chr1 (59-141)||(33786435-33786516)
chr1 (5-141)||(40215113-40215249)
chr1 (59-141)||(40273888-40273969)
chr1 (49-141)||(9910095-9910186)
chr1 (49-141)||(20304934-20305025)
chr1 (5-141)||(25463801-25463937)
chr1 (52-141)||(44690825-44690914)
chr1 (49-141)||(3559787-3559878)
chr1 (5-138)||(27523062-27523195)
chr1 (73-141)||(19722903-19722970)
chr1 (73-141)||(40273711-40273779)
chr1 (73-136)||(27523243-27523306)
chr1 (57-138)||(10167577-10167658)
chr1 (73-138)||(16045786-16045851)
chr1 (73-138)||(25463688-25463753)
chr1 (73-138)||(32000255-32000320)
chr1 (73-138)||(40215000-40215065)
chr1 (73-141)||(33786623-33786690)
chr1 (77-141)||(52064381-52064445)
chr1 (73-138)||(3559629-3559694)
chr1 (73-138)||(18404454-18404519)
chr1 (73-138)||(44094710-44094775)
chr1 (73-138)||(9910281-9910346)
chr1 (73-138)||(19015416-19015481)
chr1 (73-138)||(36966696-36966761)
chr1 (73-138)||(37821822-37821887)
chr1 (77-138)||(41876434-41876495)
chr1 (49-107)||(52329445-52329503)
chr1 (73-138)||(6883499-6883564)
chr1 (73-138)||(25973426-25973490)
chr1 (1-38)||(44690936-44690973)
chr1 (141-181)||(7255168-7255208)
chr1 (1-37)||(9910201-9910237)
[»] scaffold0471 (2 HSPs)
scaffold0471 (49-141)||(13012-13103)
scaffold0471 (73-138)||(12854-12919)
[»] scaffold0178 (2 HSPs)
scaffold0178 (49-141)||(11791-11882)
scaffold0178 (73-138)||(11633-11698)
[»] scaffold0228 (5 HSPs)
scaffold0228 (49-141)||(26106-26197)
scaffold0228 (49-141)||(16154-16245)
scaffold0228 (73-138)||(8414-8479)
scaffold0228 (73-138)||(15996-16061)
scaffold0228 (73-138)||(25948-26013)
[»] scaffold0204 (2 HSPs)
scaffold0204 (49-141)||(4566-4657)
scaffold0204 (73-138)||(4408-4473)
[»] scaffold0085 (2 HSPs)
scaffold0085 (5-141)||(47975-48110)
scaffold0085 (73-137)||(47863-47927)
[»] scaffold0096 (2 HSPs)
scaffold0096 (5-141)||(41136-41271)
scaffold0096 (73-138)||(41023-41088)
[»] scaffold0665 (1 HSPs)
scaffold0665 (73-138)||(3080-3145)
[»] scaffold0001 (1 HSPs)
scaffold0001 (141-180)||(504626-504665)
[»] scaffold0009 (1 HSPs)
scaffold0009 (140-197)||(143351-143408)
[»] scaffold0064 (1 HSPs)
scaffold0064 (140-181)||(59434-59475)
[»] scaffold0263 (1 HSPs)
scaffold0263 (140-172)||(13373-13405)
[»] scaffold0002 (1 HSPs)
scaffold0002 (140-172)||(92001-92033)


Alignment Details
Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 29737314 - 29737420
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatctactccctc 148  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatctactccctc 29737413  T
Q  149 tgtccct 155  Q
     ||||||    
T  29737414 cgtccct 29737420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 24395097 - 24395232
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    ||||| ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||    
T  24395097 ctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 24395196  T
Q  105 cttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||| ||| ||| || ||||||||||||||||||||||    
T  24395197 cttgaatcttt-tttataaaatcattcttgatatcta 24395232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 45637833 - 45637972
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 100  Q
    ||||||||| ||||||||||||||||||| ||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| |||||    
T  45637833 cagtctggccggaaatcatggggtggtggatgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgt 45637932  T
Q  101 cattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||| |||||| |||||||||||||| |||||||    
T  45637933 cattcttgaatctttctt-ataaaatcattcttaatatcta 45637972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 3962105 - 3962239
Alignment:
Q  6 tggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 105  Q
    |||| ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  3962105 tggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattc 3962204  T
Q  106 ttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||  || |||||| ||||||||||||||||||||||    
T  3962205 ttggatatttctt-ataaaatcattcttgatatcta 3962239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 4974630 - 4974539
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| ||| || ||||||||||||||||||||||    
T  4974630 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttt-tttataaaatcattcttgatatcta 4974539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 35445567 - 35445658
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttctt-ataaaatcattcttgatatcta 35445658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 42696253 - 42696345
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||| |||||||||||||||||||||||||||||||||| |||  |||||||||||| ||||||| |||||||||||||| ||||||||||    
T  42696253 atgaaaagttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatcta 42696345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 15238564 - 15238645
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatcta 15238645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 37476965 - 37476884
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| |||||| ||||||||| |||||||||||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgat-aaatcattcttgatatcta 37476884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 42611932 - 42612072
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatg 99  Q
    ||||||| | ||||||||||||||||||||||||||||           ||||||| ||||||||| |||||||||||||| |||||||| |||| ||||    
T  42611932 cagtctgaccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatg 42612031  T
Q  100 tcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||| || |||||| ||||||||||||||||||||||    
T  42612032 tcattcttagatctttctt-ataaaatcattcttgatatcta 42612072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 48880867 - 48880731
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| ||||||||||| ||||||||||||  ||||||| |||| ||||||||    
T  48880867 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcat 48880768  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  48880767 tcttgaatttttctt-ataaaatcattcttgatatcta 48880731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 20009991 - 20009902
Alignment:
Q  52 aaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||| |||||||||  |||||| ||||||||||||||||| ||| ||| ||||||||||||||| |||||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatcta 20009902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 30848739 - 30848830
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||| ||| |||||||| |||| |||||||||||| |||||||||| |||||| |||||||||||||||    
T  30848739 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaagcattcttgatatcta 30848830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 34483008 - 34483099
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||||||||||||| |||||||||| |||||||| |||| |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 34483099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 35876414 - 35876505
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||| ||| || |||||| ||||||||||||||||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttctt-ataaaatcattcttgatatcta 35876505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 15577739 - 15577651
Alignment:
Q  52 aaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||  || |||||| ||||||||||||||||||||||    
T  15577739 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttctt-ataaaatcattcttgatatcta 15577651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 15329444 - 15329535
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||||||||||||||||||||||||  ||||||| |||| |||||||||||| ||| |||||| |||||||||||||| |||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattctttatatcta 15329535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 25167735 - 25167660
Alignment:
Q  65 tgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 25167660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 18037157 - 18037238
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||| |||||||||||||||||||||| |||  |||||||||||||||| ||||||||| |||||||| ||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgat-aaatcattgttgatatcta 18037238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 3962056 - 3961991
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | |||||||||||||||||| |||||||||||||||| ||||||||||    
T  3962056 aaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 3961991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 15329350 - 15329285
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | ||||||||||||||| || |||||||||||||||| ||||||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 15329285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 48880915 - 48880980
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | ||||||||||||||| || |||||||||||||||| ||||||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 48880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 4974723 - 4974788
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 4974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 18037055 - 18036990
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | || ||||||||||||||||||||||||| |||||| ||||||||||    
T  18037055 aaatttaagggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatat 18036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 34482912 - 34482847
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatat 34482847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 42611888 - 42611823
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42611823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 45637789 - 45637724
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 45637724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 15577841 - 15577903
Alignment:
Q  76 tctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15577903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 36790454 - 36790519
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| ||||||| |||| | || |||||||||||||||||||||||||||||| | ||||||||||    
T  36790454 aaatttaagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatat 36790519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 37477068 - 37477133
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| ||||| |||||| | || ||||||||||||||||||||||||| |||||| ||||||||||    
T  37477068 aaatttaaggatgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatat 37477133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 24395026 - 24394984
Alignment:
Q  96 catgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  24395026 catgtcattcttaaaattttcttgataaaatctttcttgatat 24394984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 28885558 - 28885512
Alignment:
Q  139 ctactccctctgtccctatatgtaagcacctttttattagaggaaaa 185  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||    
T  28885558 ctactccctccgtccttatatgtaagcacccttttattagaggaaaa 28885512  T

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Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 20010086 - 20010150
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | ||| ||||||||||| || |||| ||||||||||| ||||||||||    
T  20010086 aaatctaagggtgattattctgt-atgtcattcttgaaatttttttgataaaatctttcttgatat 20010150  T

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Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 25167838 - 25167903
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||||| |||||| | || ||||||||||||||| ||||||| | |||||| ||||||||||    
T  25167838 aaatctaaggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 25167903  T

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Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 29737216 - 29737151
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | |  ||||||||||||||| ||||||| | |||||| ||||||||||    
T  29737216 aaatctaagggtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 29737151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 35444635 - 35444570
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || ||||||||| |||||| ||||| ||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatat 35444570  T

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Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 32553681 - 32553723
Alignment:
Q  138 tctactccctctgtccctatatgtaagcacctttttattagag 180  Q
    ||||||||||| |||||||||||||| |||| |||||||||||    
T  32553681 tctactccctccgtccctatatgtaaacacccttttattagag 32553723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 15238459 - 15238394
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||| |||||||| | || |||||||||||| |||||||||||| ||| |  ||||||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatat 15238394  T

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Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15577794 - 15577757
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  15577794 cagtctggccggaaatcatgggttggtgggtgttatgt 15577757  T

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Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25167794 - 25167757
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  25167794 cagtctggccggaaatcatggggtgatgggtgttatgt 25167757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 30848646 - 30848597
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 122  Q
    |||||||||| |||||| | || ||||||||||||||| |||||||||||    
T  30848646 aaatctaaggatgattattctgccatgtcattcttaaaattttcttgata 30848597  T

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Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 36790336 - 36790283
Alignment:
Q  85 gattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||| ||||||||||||||||| ||| ||| ||||||||| |||| |||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatat 36790283  T

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Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 33839705 - 33839804
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatctactccctc 148  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatatactccctc 33839804  T

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Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 36864928 - 36864836
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  36864928 atgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatcta 36864836  T

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Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 47738281 - 47738373
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatcta 47738373  T

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Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 22426288 - 22426149
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 100  Q
    ||||||||| ||||||||||||||||||||||||||||          ||||||| ||||||||||||||||||||||||  ||||||| |||| |||||    
T  22426288 cagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgt 22426189  T
Q  101 cattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||| |||||| ||||||||||||||||||||||    
T  22426188 cattcttgaatctttctt-ataaaatcattcttgatatcta 22426149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 40328004 - 40328093
Alignment:
Q  52 aaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  40328004 aaaggtaaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatcta 40328093  T

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Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 19650838 - 19650704
Alignment:
Q  6 tggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 105  Q
    |||| ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  19650838 tggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattc 19650739  T
Q  106 ttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||  || |||||| ||||||||||||||||||||||    
T  19650738 ttggatctttctt-ataaaatcattcttgatatcta 19650704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 33145882 - 33145973
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  33145882 atgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 33145973  T

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Target: chr3; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 42921295 - 42921387
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||||||||| |||||||||||  |||| |||||||||||||||| ||||||||||||||||||||| |||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatcta 42921387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 3456185 - 3456325
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatg 99  Q
    ||||||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| | |||||| |||||||||    
T  3456185 cagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatg 3456284  T
Q  100 tcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||| ||| |||||| ||||||||||||||||||||||    
T  3456285 tcattcttgaatctttctt-ataaaatcattcttgatatcta 3456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 30385526 - 30385658
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    ||||| ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||    
T  30385526 ctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 30385625  T
Q  105 cttaaatttttcttgataaaatcattcttgatat 138  Q
    ||| ||| |||||| |||||||||||||||||||    
T  30385626 cttgaatctttctt-ataaaatcattcttgatat 30385658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 3137309 - 3137218
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  3137309 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 3137218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 26612916 - 26613008
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||| |||||| ||||||||||| ||||||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatcta 26613008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 34482783 - 34482692
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 34482692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 37522223 - 37522314
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| | || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  37522223 atgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatcta 37522314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 8361924 - 8361843
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatcta 8361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 3089589 - 3089680
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||| || |||||| ||||||||||||||||||||||    
T  3089589 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatcta 3089680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 33113914 - 33114055
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcat 98  Q
    ||||||||| ||||||||||||||||||||||||||||            ||||||| ||||||||||||| |||||||||| |||||||| |||| |||    
T  33113914 cagtctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccat 33114013  T
Q  99 gtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||| ||| |||||| ||||||||||||||||||||||    
T  33114014 gtcattcttgaatctttctt-ataaaatcattcttgatatcta 33114055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 24343720 - 24343811
Alignment:
Q  50 tgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||| |||||||||||||||||||||||   | ||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatcta 24343811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 3574465 - 3574330
Alignment:
Q  6 tggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    |||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||    
T  3574465 tggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcatt 3574366  T
Q  105 cttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||  || |||||| ||||||||||||||||||||||    
T  3574365 cttggatctttctt-ataaaatcattcttgatatcta 3574330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 2754889 - 2754980
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||| ||| |||||||| |||| |||||||||||||||| |||||| ||||||| ||||||||||||||    
T  2754889 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttctt-ataaaatgattcttgatatcta 2754980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 8320477 - 8320386
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattattgatatcta 8320386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 37216948 - 37216857
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||  |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  37216948 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 37216857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 9796914 - 9796833
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||||||| ||| ||||||||| |||||||||||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgat-aaatcattcttgatatcta 9796833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 6042055 - 6042138
Alignment:
Q  57 ttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||||||||  || |||||| ||||||||||||||||||||||    
T  6042055 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatcta 6042138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 48161084 - 48161167
Alignment:
Q  57 ttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||  || |||||| ||||||||||||||||||||||    
T  48161084 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttctt-ataaaatcattcttgatatcta 48161167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 42297985 - 42298090
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 100  Q
    ||||||||| ||||||||||||||||| | ||||||||          ||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  42297985 cagtctggccggaaatcatggggtggtagatgttatgt-attttttttatgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgt 42298083  T
Q  101 cattctt 107  Q
    |||||||    
T  42298084 cattctt 42298090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 41224414 - 41224495
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||| |||||| |||||||||||| |||| |||||||||||| ||| ||||||||| |||||||||||||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatcta 41224495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 3574515 - 3574580
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 3574580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 6041961 - 6041896
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | ||||||||||||||| || |||||||||||||||| ||||||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 6041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 42297431 - 42297365
Alignment:
Q  73 aaatctaagggtgattactgt-gtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | | ||||||||||||||||| |||||||||||||||| ||||||||||    
T  42297431 aaatctaagggtgattattctagtcatgtcattcttaaaattttcttgataaaatctttcttgatat 42297365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 2754794 - 2754729
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||| |||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2754729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 3456141 - 3456076
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||| ||||||||||| |||||||||||||||| ||||||||||    
T  3456141 aaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatat 3456076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 11347345 - 11347280
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||||||| |||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11347280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 37217041 - 37217106
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  37217041 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 37217106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 37522130 - 37522065
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||| |||||||||| | |||||||||||||||||| ||||||||| |||||| ||||||||||    
T  37522130 aaatcttagggtgattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatat 37522065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 48160982 - 48160917
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||| ||||||||||| |||||||||||||||| ||||||||||    
T  48160982 aaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatat 48160917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 46919072 - 46919156
Alignment:
Q  57 ttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||| |||| ||||||||  |||||||| | || ||||||||| || ||| ||| |||||||||||||||||||||||||    
T  46919072 ttaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatcta 46919156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 3137402 - 3137467
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 3137467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 8320572 - 8320637
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | || ||| ||||||||||| |||||||||||||||| ||||||||||    
T  8320572 aaatttaagggtgattattttgccatatcattcttaaaattttcttgataaaatctttcttgatat 8320637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||| |||||||| | || |||||||||||| |||||||||||| |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 19650888 - 19650953
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||| |||||||| | || ||||||||||||||| |||||||||||||||| ||||| ||||    
T  19650888 aaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatat 19650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 22426332 - 22426397
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||| ||||| |||||||||||||||| ||||| ||||    
T  22426332 aaatctaagggtgattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatat 22426397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 33839608 - 33839543
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||| |||||||| | |||||||| |||||||||||||| ||||||||||| ||||| ||||    
T  33839608 aaatctaatggtgattattctgtcatgttattcttaaattttttttgataaaatctttcttaatat 33839543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 42921199 - 42921155
Alignment:
Q  94 gtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||    
T  42921199 gtcatgtcattcttaaaattttcttgataaaatctttcttgatat 42921155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 33113870 - 33113805
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||| |||||| || ||||||| |||||||| ||||||||||    
T  33113870 aaatctaagggtgattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatat 33113805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 33145789 - 33145725
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||| || |||||||| ||||||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaatttt-ttaataaaatctttcttgatat 33145725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 30385088 - 30385024
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgata 137  Q
    |||| |||||||||||| | || ||||||||| || || |||||||||||||||| |||||||||    
T  30385088 aaatataagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgata 30385024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 8362033 - 8362080
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttga 120  Q
    ||||||||||||||||| | || |||||||||||| ||||||||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttcttga 8362080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 41883114 - 41883031
Alignment:
Q  52 aaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttga 135  Q
    ||||||| |||||| ||||||||||| || | |||||| | |  |||||||||||| ||| |||||| ||||||||||| ||||    
T  41883114 aaaggttgataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 30385136 - 30385169
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||| ||||||||||||||||||||||||||||    
T  30385136 ctggccggaaatcatggggtggtgggtgttatgt 30385169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 34482898 - 34482963
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | |  ||| |||||||| || ||||||||| |||||| ||||||||||    
T  34482898 aaatctaagggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatat 34482963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 41883163 - 41883130
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgt 38  Q
    |||||| |||||||||||||||||||||||||||    
T  41883163 ctggctagaaatcatggggtggtgggtgttatgt 41883130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 41883211 - 41883260
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 122  Q
    |||| |||||||||||| | || |||||||||||| ||||||||||||||    
T  41883211 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgata 41883260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 42380797 - 42380740
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 197  Q
    |||||||||||||||||||| |||  ||| |||||||||||| ||||  |||||||||    
T  42380797 tactccctctgtccctatatctaataacccttttattagaggcaaaggatgcttacat 42380740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 42409511 - 42409454
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 197  Q
    |||||||||||||||||||| |||  ||| |||||||||||| ||||  |||||||||    
T  42409511 tactccctctgtccctatatctaataacccttttattagaggcaaaggatgcttacat 42409454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||| ||| |||| | || ||| |||||||| ||| ||||||||||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 11347394 - 11347426
Alignment:
Q  6 tggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||| |||||||||||||||||||||||||||    
T  11347394 tggctagaaatcatggggtggtgggtgttatgt 11347426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 8e-36; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 3521945 - 3521811
Alignment:
Q  6 tggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 105  Q
    |||| ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  3521945 tggccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattc 3521846  T
Q  106 ttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||| ||||||||||||||||||||||    
T  3521845 ttaaatttttctt-ataaaatcattcttgatatcta 3521811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 6043451 - 6043316
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    ||||| ||||||||||||||| ||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||    
T  6043451 ctggccggaaatcatggggtgttgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 6043352  T
Q  105 cttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||| ||||||||||||||||||||||    
T  6043351 cttaaatttttctt-ataaaatcattcttgatatcta 6043316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 3362899 - 3363040
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcat 98  Q
    ||||||||| ||||||||||||||||||||||||||||            ||||||| |||||||||||||||||||||||| |||| ||| ||||||||    
T  3362899 cagtctggccggaaatcatggggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcat 3362998  T
Q  99 gtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  3362999 gtcattcttaaatttttctt-ataaaatcattcttgatatcta 3363040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 12614633 - 12614541
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||| ||||||||||||| |||||||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatcta 12614541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 4892327 - 4892463
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnna-tgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||          | |||||| |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  4892327 ctggccggaaatcatggggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 4892426  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  4892427 tcttgaatttttctt-ataaaatcattcttgatatcta 4892463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 33584269 - 33584133
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  33584269 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 33584170  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  33584169 tcttgaatttttctt-ataaaatcattcttgatatcta 33584133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 25398363 - 25398499
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  25398363 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 25398462  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    | || |||||||||| ||||||||||||||||||||||    
T  25398463 tgttgaatttttctt-ataaaatcattcttgatatcta 25398499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 8145543 - 8145634
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  8145543 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 8145634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 12850972 - 12851063
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||| ||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  12850972 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 12851063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 38899621 - 38899529
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||| ||| |||| |||||||||||| ||||||| || ||||||||||||||||||||||    
T  38899621 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatcta 38899529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 14138799 - 14138928
Alignment:
Q  11 ggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 110  Q
    ||||||||||||||||||||||||||||          ||||||| ||||||||||||| |||||||||| |||||||| |||| |||||||||||| ||    
T  14138799 ggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaa 14138898  T
Q  111 tttttcttgataaaatcattcttgatatcta 141  Q
    | |||||| |||||||||||||| |||||||    
T  14138899 tctttctt-ataaaatcattcttaatatcta 14138928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 17545567 - 17545486
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatcta 17545486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 22912942 - 22912861
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||| ||| ||||||||| |||||||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatcta 22912861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 37321737 - 37321597
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatg 99  Q
    |||||| || ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| |||     
T  37321737 cagtctagccggaaatcatggggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatt 37321638  T
Q  100 tcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||| ||| |||||| ||||||||||||||||||||||    
T  37321637 tcattcttgaatatttctt-ataaaatcattcttgatatcta 37321597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 2477761 - 2477897
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| ||||||||| |||||||||||||| |||||| | |||| ||||||||    
T  2477761 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcat 2477860  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||| || |||||| ||||||||||||||||||||||    
T  2477861 tcttagatctttctt-ataaaatcattcttgatatcta 2477897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4433951 - 4433844
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 100  Q
    ||||||||| |||||||||||| |||||||||||||||          ||||||| ||||||||| |||||||||||||| |||||||| |||| |||||    
T  4433951 cagtctggccggaaatcatgggatggtgggtgttatgtatttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgt 4433852  T
Q  101 cattctta 108  Q
    ||||||||    
T  4433851 cattctta 4433844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 2477713 - 2477648
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2477648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 11361119 - 11361184
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11361184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 4892279 - 4892214
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||||| |||||| ||||||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 4892214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 8564969 - 8564912
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 197  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||| | |||||||||    
T  8564969 tactccctccgtccctatatgtaagcacctttttattagaagaaaaaaatgcttacat 8564912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 12614721 - 12614786
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | ||||||||||||||| ||| ||||||||||||||  ||||||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatat 12614786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 22913042 - 22913107
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| |||||||||||| |||||| ||||||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatat 22913107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 25398315 - 25398250
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||||| |||||| ||||||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 25398250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 11361071 - 11360947
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| ||||||||| ||| |||||||||| | |||||| |||| ||||||||    
T  11361071 ctggccggaaatcatggggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcat 11360972  T
Q  104 tcttaaatttttcttgataaaatcat 129  Q
    |||| ||| |||||| ||||||||||    
T  11360971 tcttgaatctttctt-ataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 6043499 - 6043564
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | |  |||||||||||| || |||||||||||||||| ||||||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatat 6043564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 33584317 - 33584382
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | || ||||||||||||||| ||||||||| |||||| ||||||||||    
T  33584317 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 33584382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 37321781 - 37321841
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattctt 133  Q
    |||| |||||||||||| | || ||||||||||||||| |||||||||||||||| |||||    
T  37321781 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttctt 37321841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 13664737 - 13664787
Alignment:
Q  57 ttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 107  Q
    ||||||||| ||||||||||||||||||||||| | | |||||||||||||    
T  13664737 ttaataaataagactgaaatctaagggtgattattctatcatgtcattctt 13664787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 27481995 - 27482077
Alignment:
Q  52 aaaggttaataaatgagactgaaa-tctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattctt 133  Q
    |||||||||||||| ||| | ||| ||||| |||||||| | ||| ||||||||||| ||| ||| |||||||||||||||||    
T  27481995 aaaggttaataaataagattaaaaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 3362855 - 3362790
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||| ||| | || ||||||||||||  | |||||||||||||||| ||||||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 3362790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 14138745 - 14138680
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | || ||||| |||||| || |||||||||||||||| ||||||||||    
T  14138745 aaatttaagggtgattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatat 14138680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 38899714 - 38899779
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||| ||| | || ||||||||||||  | |||||||||||||||| ||||||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 38899779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 10458465 - 10458409
Alignment:
Q  82 ggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||| | || |||||||||||| ||||||||||||||||||  ||||||||||    
T  10458465 ggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 31640880 - 31640763
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    ||||| ||||||||||||||||||||||||||||          ||||||||||||||||| |||    ||||||| |  ||||| | || |||||||||    
T  31640880 ctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaaggttaataaataagatatcaatctaaagtcgattattctgccatgtcatt 31640781  T
Q  105 cttaaatttttcttgata 122  Q
    ||| ||| ||||||||||    
T  31640780 cttgaatctttcttgata 31640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 36880213 - 36880150
Alignment:
Q  49 atgaaaggttaataaatgagactgaaa-tctaagggtgattac----tgtgtcatgtcattctt 107  Q
    |||||||||||||| |||||||||||| ||||||||||||||     |||||||||||||||||    
T  36880213 atgaaaggttaatagatgagactgaaaatctaagggtgattatatattgtgtcatgtcattctt 36880150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 4433995 - 4434060
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||| |||||||| || ||||||| | |||||| ||||||||||    
T  4433995 aaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatat 4434060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 12850878 - 12850813
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||| ||| | || ||||||||| ||  | |||||||||||||||| ||||||||||    
T  12850878 aaatctaagggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatat 12850813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 12850926 - 12850959
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||| ||||||||||||||||||||||||||||    
T  12850926 ctggccggaaatcatggggtggtgggtgttatgt 12850959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 17545673 - 17545738
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||| |||||||| | || |||||||||||| |||||||||||| ||| |  ||||||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatat 17545738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 27481880 - 27481843
Alignment:
Q  96 catgtcattcttaaatttttcttgataaaatcattctt 133  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  27481880 catgtcattcttgaatttttcttgataaaatctttctt 27481843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 34547730 - 34547771
Alignment:
Q  139 ctactccctctgtccctatatgtaagcacctttttattagag 180  Q
    |||||| |||||||||||||||||| ||||||||||| ||||    
T  34547730 ctactctctctgtccctatatgtaaacacctttttatcagag 34547771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 23268006 - 23267866
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatg 99  Q
    ||||||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||    
T  23268006 cagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 23267907  T
Q  100 tcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  23267906 tcattcttaaatttttctt-ataaaatcattcttgatatcta 23267866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 9293516 - 9293379
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtca 102  Q
    ||||| |||||||||||||||||||||||||||  |          ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  9293516 ctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtca 9293417  T
Q  103 ttcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||| ||| |||||| ||||||||||||||||||||||    
T  9293416 ttcttgaatctttctt-ataaaatcattcttgatatcta 9293379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 10662058 - 10662149
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  10662058 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 10662149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 22592880 - 22592974
Alignment:
Q  49 atgaaaggttaataaatgagactgaaa--tctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatcta 22592974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 33380332 - 33380468
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnna-tgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||          | |||||| |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  33380332 ctggccggaaatcatggggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 33380431  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  33380432 tcttgaatttttctt-ataaaatcattcttgatatcta 33380468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 35160929 - 35161020
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  35160929 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 35161020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 3989197 - 3989337
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatg 99  Q
    ||||||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| ||| |||| |||||||||    
T  3989197 cagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatg 3989296  T
Q  100 tcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||  || |||||| ||||||||||||||||||||||    
T  3989297 tcattcttggatctttctt-ataaaatcattcttgatatcta 3989337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 7475448 - 7475312
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| | |||||| ||||    
T  7475448 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcat 7475349  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  7475348 tcttgaatttttctt-ataaaatcattcttgatatcta 7475312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcat 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 31174778 - 31174639
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 100  Q
    ||||||| | ||||||||||||||||||||||||||||          ||||||| ||||||||||||| |||||||||| || | ||| ||||||||||    
T  31174778 cagtctgaccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgt 31174679  T
Q  101 cattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||| |||||| ||||||||||||||||||||||    
T  31174678 cattcttgaatctttctt-ataaaatcattcttgatatcta 31174639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 9723576 - 9723668
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||| || ||||||| |||||||||||||| |||||||| | ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  9723576 atgaaaagtgaataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatcta 9723668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 16767357 - 16767285
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgat 121  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttcttgat 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 21393570 - 21393490
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaa-ttttcttgat-aaatcattcttgatatcta 21393490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 13355018 - 13355109
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||||||||||||||||||||||||  ||||||| |||| ||||||||||||  || |||||| ||||||||||||||||||||||    
T  13355018 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatcta 13355109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 43331092 - 43331173
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||| |||||||| |||  |||||||||||| ||| ||||||||| |||||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgat-aaatcattcttgatatcta 43331173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 10661964 - 10661899
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 10661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 35160834 - 35160769
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 35160769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 14941259 - 14941201
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 107  Q
    ||||||||||||||||| ||| |||||||||||| |||||| |||||||||||||||||    
T  14941259 atgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattctt 14941201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 21936207 - 21936310
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| ||||||||||| |||||||||||| |||||||| |||| ||||||||    
T  21936207 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcat 21936306  T
Q  104 tctt 107  Q
    ||||    
T  21936307 tctt 21936310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 34321042 - 34320994
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 107  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattctt 34320994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 7475496 - 7475561
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | | ||||||||||||| || ||||||||| |||||| ||||||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatat 7475561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 9293564 - 9293629
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| ||  ||||||||||||||| ||||||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatat 9293629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 9723482 - 9723417
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | ||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatat 9723417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 14941354 - 14941419
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| ||| |||||| |||||||| ||||||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatat 14941419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 21393676 - 21393741
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | |  ||||||||||||||||||||||||| |||||  ||||||||||    
T  21393676 aaatctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatat 21393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 21936158 - 21936093
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||| |||||||| || |||||||||||||||| ||||||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 21936093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 23268050 - 23268115
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 23268115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || ||||||| |||||||| ||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 33380284 - 33380219
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| |  | ||||||||||||||| ||||||||| |||||| ||||||||||    
T  33380284 aaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 33380219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 43330989 - 43330924
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| ||||||| |||| |||||| ||||||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatat 43330924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 9154210 - 9154164
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagaggaaaag 186  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||    
T  9154210 tactccctccgtccctatatctaagcacccttttattagaggaaaag 9154164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 3989153 - 3989104
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 122  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||    
T  3989153 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgata 3989104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 12457018 - 12457075
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 197  Q
    ||||||||| |||||||||| |||||||| |||||||||||| ||||  |||||||||    
T  12457018 tactccctccgtccctatatctaagcacccttttattagaggcaaagggtgcttacat 12457075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 13354923 - 13354858
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||||||| |||| | || ||| |||||||| || |||||||||||||||| ||||||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||| |||||||| | ||||||||||||||| ||| |||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 33810617 - 33810662
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagaggaaaa 185  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||    
T  33810617 tactcccttcgtccctatatgtaagcacccttttattagaggaaaa 33810662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 36887396 - 36887339
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 197  Q
    ||||||||| |||||||||||||| |||| |||||||| ||||||| | |||||||||    
T  36887396 tactccctccgtccctatatgtaaacaccattttattataggaaaaaaatgcttacat 36887339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 41877555 - 41877612
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 197  Q
    |||||||| ||||||||||| |||||||  |||||||||| ||||||| |||||||||    
T  41877555 tactccctttgtccctatatctaagcacacttttattagaagaaaagagtgcttacat 41877612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 12890265 - 12890310
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagaggaaaa 185  Q
    ||||||||| |||||||||| |||||| | ||||||||||||||||    
T  12890265 tactccctccgtccctatatctaagcatccttttattagaggaaaa 12890310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16767416 - 16767379
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  16767416 cagtctggccggaaatcatagggtggtgggtgttatgt 16767379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 35160882 - 35160915
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||| ||||||||||||||||||||||||||||    
T  35160882 ctggccggaaatcatggggtggtgggtgttatgt 35160915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 12457093 - 12457065
Alignment:
Q  140 tactccctctgtccctatatgtaagcacc 168  Q
    |||||||||||||||||||||||||||||    
T  12457093 tactccctctgtccctatatgtaagcacc 12457065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 32064916 - 32065007
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32064916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatcta 32065007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 37132575 - 37132484
Alignment:
Q  50 tgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatcta 37132484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 6108173 - 6108037
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  6108173 ctggccggaaatcatggggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcat 6108074  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  6108073 tcttgaatttttctt-ataaaatcattcttgatatcta 6108037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 34665515 - 34665642
Alignment:
Q  13 aaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatt 112  Q
    ||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||     
T  34665515 aaatcatggagtggtgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatc 34665614  T
Q  113 tttcttgataaaatcattcttgatatcta 141  Q
    |||||| ||||||||||||||||||||||    
T  34665615 tttctt-ataaaatcattcttgatatcta 34665642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 37985999 - 37985860
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 100  Q
    ||||||||| ||||||||||||||||||||||||||||          ||||||| |||||||||| ||||||||||||| |||||||| |||| |||||    
T  37985999 cagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgt 37985900  T
Q  101 cattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||| |||||| ||||||||||||||||||||||    
T  37985899 cattcttgaatctttctt-ataaaatcattcttgatatcta 37985860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 20091696 - 20091605
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  20091696 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 20091605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 17841790 - 17841654
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  17841790 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 17841691  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  17841690 tcttgaatttttctt-ataaaatcattcttgatatcta 17841654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 3596936 - 3596845
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  3596936 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatcta 3596845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 25581134 - 25581043
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  25581134 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 25581043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 26042008 - 26041917
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  26042008 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 26041917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 30055686 - 30055777
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||| |||||||    
T  30055686 atgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatcta 30055777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 40780024 - 40779933
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  40780024 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 40779933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 42754937 - 42754846
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  42754937 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttctt-ataaaatcattcttgatatcta 42754846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 141
Target Start/End: Complemental strand, 1503730 - 1503647
Alignment:
Q  57 ttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  1503730 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 1503647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 14129029 - 14129120
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattcttgatatcta 14129120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 15187686 - 15187821
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    ||||| ||||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| ||||  ||||||||    
T  15187686 ctggccggaaatcatggagtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatt 15187785  T
Q  105 cttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||  || |||||| ||||||||||||||||||||||    
T  15187786 cttggatctttctt-ataaaatcattcttgatatcta 15187821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 41819663 - 41819590
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 122  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  41819663 atgataggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgata 41819590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 10044518 - 10044609
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||||||||||||| |||||||||| |||||||| |||| |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 10044609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 24211267 - 24211176
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||  || |||||| ||||||||||||||||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatcta 24211176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 30834989 - 30834859
Alignment:
Q  11 ggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 110  Q
    ||||||||||||||||||||||||||||          || ||| ||| | |||| | ||||||||||||||||| ||| | ||||||||||||||| ||    
T  30834989 ggaaatcatggggtggtgggtgttatgtattttattttatcaaaagttgaaaaataacactgaaatctaagggtggttattctgtcatgtcattctttaa 30834890  T
Q  111 tttttcttgataaaatcattcttgatatcta 141  Q
    | |||||||||||||||||||||||||||||    
T  30834889 tctttcttgataaaatcattcttgatatcta 30834859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 32393991 - 32394114
Alignment:
Q  13 aaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatt 112  Q
    ||||||||||||||| ||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||||||     
T  32393991 aaatcatggggtggtaggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaata 32394089  T
Q  113 tttcttgataaaatcattcttgatat 138  Q
    ||| || |||||||||||||||||||    
T  32394090 ttt-tttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 38017059 - 38017194
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggt-gattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           |||||| |||||||||||||||||||||||| |||  |||| |||||||||||||    
T  38017059 ctggccggaaatcatggggtggtgggtgttatgtattttttttt-tgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcat 38017157  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| ||| |||||| ||||||||||||||||||||||    
T  38017158 tcttgaatctttctt-ataaaatcattcttgatatcta 38017194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 1645859 - 1645768
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||   | |||||| ||||||||||||||||||||||    
T  1645859 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttctt-ataaaatcattcttgatatcta 1645768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 31347659 - 31347580
Alignment:
Q  61 taaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||| |||||||| |||| |||||||||||| ||| ||||||||| |||||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatcta 31347580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 39772697 - 39772608
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatc 139  Q
    ||||||| |||||||| || |||||||||||| |||||||| |||||||||||||||||  || |||||| ||||||||||||||||||||    
T  39772697 atgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 35353211 - 35353299
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||| ||||||||||||| | |||| ||| |||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||    
T  35353211 atgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 3890506 - 3890418
Alignment:
Q  53 aaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||| ||| | |||||||| |||||||| | || ||| |||||||| ||| |||||||||||||||||||||||||||||    
T  3890506 aaggttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatcta 3890418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 24844756 - 24844664
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||| | ||| | ||||||||| ||||||| | || |||| ||||||||||| |||||||||||||||||| ||||||||||    
T  24844756 atgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatcta 24844664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 7017743 - 7017662
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||||| |||||| | |   ||||||||||||||| ||||||||| |||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgat-aaatcattcttgatatcta 7017662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 7022159 - 7022240
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||| ||||| |||| | |||||||||| ||| ||||||||| |||||||| ||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgat-aaatcattgttgatatcta 7022240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 8453959 - 8454072
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    ||||| |||||| |||| ||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||    
T  8453959 ctggccggaaattatggtgtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 8454058  T
Q  105 cttaaatttttctt 118  Q
    ||| |||| |||||    
T  8454059 cttgaattcttctt 8454072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 1645953 - 1646018
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||| |||||||| |||||||||||||||| ||||||||||    
T  1645953 aaatctaagggtgattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatat 1646018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 8453911 - 8453846
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | ||||||||||||||| || ||||||||| |||||| ||||||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatat 8453846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 14128941 - 14128876
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||| ||||||||||| ||||||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatat 14128876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 26042104 - 26042169
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | ||||||||||||||| || |||||||||||||||| ||||| ||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatat 26042169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 32064822 - 32064757
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 32064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 32393935 - 32393870
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  32393935 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 32393870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 34665459 - 34665394
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 34665394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 35353118 - 35353053
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||||| |||||| ||||||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 35353053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 37986043 - 37986108
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||| ||||||||||| ||||||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 37986108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 6108221 - 6108286
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||| | |||||| ||||||||||    
T  6108221 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 6108286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||| |||||||| |||||||||||| |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 17841838 - 17841903
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 17841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 20091789 - 20091854
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||  ||||||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 20091854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 24844847 - 24844911
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||| |||||||  ||||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatat 24844911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 31347770 - 31347835
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| |||||||||||| |||||  ||||||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatat 31347835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 40780117 - 40780182
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 40780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 27835345 - 27835293
Alignment:
Q  52 aaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    |||||||||||||||||| |||||||||||| |||||| |||||||| |||||    
T  27835345 aaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatcatt 27835293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 38017047 - 38016983
Alignment:
Q  74 aatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| ||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  38017047 aatccaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 3817918 - 3817967
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 122  Q
    ||||||||||||||||| | |||||||| |||||| ||||||||||||||    
T  3817918 aaatctaagggtgattattctgtcatgtaattcttgaatttttcttgata 3817967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 15187637 - 15187572
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||||||| |||| | || ||| |||||||| || |||||||||||||||| ||||||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 15187572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 15972865 - 15972914
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 122  Q
    ||||||||||||||||| | ||||||||||||||| ||| ||||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttcttgata 15972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 24211541 - 24211606
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | || |||| ||||||| || |||||||||||||||| ||||||||||    
T  24211541 aaatttaagggtgattattctgccatgccattcttgaaattttcttgataaaatctttcttgatat 24211606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 27782105 - 27782170
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||| || ||| ||||||||||||||  ||||||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatat 27782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 38125659 - 38125618
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagagg 181  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  38125659 tactccctccgtccctatatgtaagcacccttttattagagg 38125618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 39772789 - 39772854
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||| ||||||||||  ||||||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatat 39772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 41819766 - 41819831
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||| |||||||||||   |||||||||||||| ||||||||||    
T  41819766 aaatctaagggtgattattctgccatatcattcttaaaacattcttgataaaatctttcttgatat 41819831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 37132651 - 37132699
Alignment:
Q  78 taagggtgattactgtgtcatgtcattcttaaatttttcttgataaaat 126  Q
    ||||| |||||| | || |||||||||||||||||||||||||||||||    
T  37132651 taaggatgattattctgccatgtcattcttaaatttttcttgataaaat 37132699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 1886633 - 1886672
Alignment:
Q  99 gtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  1886633 gtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 7017853 - 7017918
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||||| |||||| | || |||||||||||| |||||||||| | |||||| ||| ||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatat 7017918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 24211493 - 24211460
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||| ||||||||||||||||||||||||||||    
T  24211493 ctggccggaaatcatggggtggtgggtgttatgt 24211460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 30835035 - 30835099
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||| ||||||||||| | || |||||||||||| ||||||| | ||||||||| ||||||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttt-tcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 3890556 - 3890524
Alignment:
Q  6 tggctggaaatcatggggtggtgggtgttatgt 38  Q
    |||||| ||||||||||||||||||||||||||    
T  3890556 tggctgaaaatcatggggtggtgggtgttatgt 3890524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 28675318 - 28675409
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  28675318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 28675409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 17705409 - 17705273
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 100  Q
    ||||||||| |||||||||||| |||||||||||||||          |||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  17705409 cagtctggccggaaatcatgggatggtgggtgttatgt--aattttttatgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgt 17705313  T
Q  101 cattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||| |||||| ||||||||||||||||||||||    
T  17705312 cattcttgaatctttctt-ataaaatcattcttgatatcta 17705273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 29693615 - 29693707
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||| |||||||| |||||||||||||||||| |||| | || |||||||||||||||| |||||||||||||||||||||||||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatcta 29693707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 32702375 - 32702466
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  32702375 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 32702466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 33696867 - 33696958
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||||||| |||||| ||||||||||||||||||||||    
T  33696867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatcta 33696958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 2309318 - 2309227
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| |||||| ||||||||||  ||||||||||    
T  2309318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatcgttgatatcta 2309227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 33695267 - 33695130
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgt--gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtca 102  Q
    ||||| ||||||||||||||||||||||||||||            ||||||| |||||||||||||||||||||||| |||||||| |||| ||| |||    
T  33695267 ctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatca 33695168  T
Q  103 ttcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  33695167 ttcttaaatatttctt-ataaaatcattcttgatatcta 33695130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 17175961 - 17175825
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||  ||||||||    
T  17175961 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcat 17175862  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| ||| |||||| ||||||||||||||||||||||    
T  17175861 tcttgaatctttctt-ataaaatcattcttgatatcta 17175825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 18365513 - 18365378
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    ||||| |||||||||||||| |||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| ||||  ||||||||    
T  18365513 ctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatt 18365414  T
Q  105 cttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||  || |||||| ||||||||||||||||||||||    
T  18365413 cttggatctttctt-ataaaatcattcttgatatcta 18365378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 18370777 - 18370642
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    ||||| |||||||||||||| |||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| ||||  ||||||||    
T  18370777 ctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatt 18370678  T
Q  105 cttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||  || |||||| ||||||||||||||||||||||    
T  18370677 cttggatctttctt-ataaaatcattcttgatatcta 18370642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 6031632 - 6031546
Alignment:
Q  52 aaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatc 139  Q
    |||| |||||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||| || ||||||||||||||||||||    
T  6031632 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttt-tttataaaatcattcttgatatc 6031546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 11548474 - 11548393
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||| |||  |||||||| |||||||||||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgat-aaatcattcttgatatcta 11548393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 17705453 - 17705518
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||||||||||| ||||||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 17705518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 18889577 - 18889466
Alignment:
Q  11 ggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 110  Q
    ||||||||||||||||||||| ||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| ||    
T  18889577 ggaaatcatggggtggtgggttttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 18889478  T
Q  111 tttttcttgata 122  Q
    |  |||||||||    
T  18889477 tcattcttgata 18889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 23290976 - 23290885
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| ||| |||| |||| ||| |||||||| ||| |||||| ||||||||||| ||||||||||    
T  23290976 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttctt-ataaaatcatttttgatatcta 23290885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 6127352 - 6127287
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 6127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 23291072 - 23291137
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 23291137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 17176009 - 17176074
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | ||||||||||||||| || |||| ||||||||||| ||||||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatat 17176074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 33695315 - 33695380
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 33696773 - 33696708
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 582602 - 582531
Alignment:
Q  71 tgaaatctaagggtgattactgtgtc-atgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||| |||||||| | || | || ||||||||||||||||||| ||||||||||||||||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatcta 582531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 6127447 - 6127505
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 107  Q
    ||||||| ||||||||||||||||||||||||  ||||||| |||| ||||||||||||    
T  6127447 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattctt 6127505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 34238948 - 34238891
Alignment:
Q  83 gtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatctt-cttgataaaatcattcttgatatcta 34238891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 6031729 - 6031794
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | |||||||||||||||||| |||| ||||| ||||| ||||||||||    
T  6031729 aaatttaagggtgattattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatat 6031794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 11548576 - 11548641
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| |||||||||||| |||||  ||||||||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatat 11548641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 28675225 - 28675160
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| |  | |||||||||||| || |||||||||||||||| ||||||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatat 28675160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 9752185 - 9752110
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaa 80  Q
    ||||| ||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||||||||    
T  9752185 ctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaa 9752110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 8515660 - 8515560
Alignment:
Q  11 ggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 110  Q
    ||||||||||||||||||| ||||||||          |||||| |||||||||| ||||||||||||||| ||||||| | |  ||||||||| |||||    
T  8515660 ggaaatcatggggtggtggatgttatgtatttttttttatgaaatgttaataaataagactgaaatctaagagtgattattctaccatgtcatttttaaa 8515561  T
Q  111 t 111  Q
    |    
T  8515560 t 8515560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 18365561 - 18365626
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | || |||||||||||| || |||| ||||||||||| ||||||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18365626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 18370825 - 18370890
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | || |||||||||||| || |||| ||||||||||| ||||||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18370890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25987051 - 25987088
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  25987051 cagtctggccggaaatcatggggtggtgggtgttatgt 25987088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 8515723 - 8515778
Alignment:
Q  83 gtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||| | || |||||||||||||||| | ||||||||||||| ||||||||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatat 8515778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 9752233 - 9752283
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataa 123  Q
    ||||||||||||||||| | || ||| |||||||| |||||||||||||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttcttgataa 9752283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 6031681 - 6031648
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||| ||||||||||||||||||||||||||||    
T  6031681 ctggccggaaatcatggggtggtgggtgttatgt 6031648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 18889685 - 18889749
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||||||| |||| | || |||||||||||| || |||||||||| ||||| ||||||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatat 18889749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 25987007 - 25986942
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||| ||||||| | || |||||||||||| || ||||||| |||||||| ||||||||||    
T  25987007 aaatttaagagtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatat 25986942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 32702282 - 32702217
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||| |||||||| || ||||| ||| |||||| ||||||||||    
T  32702282 aaatctaagggtgattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatat 32702217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 33696821 - 33696854
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||| ||||||||||||||||||||||||||||    
T  33696821 ctggccggaaatcatggggtggtgggtgttatgt 33696854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 30416997 - 30416941
Alignment:
Q  141 actccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 197  Q
    |||||||| | ||||||||||||||| | |||||||||||| ||||| | |||||||    
T  30416997 actccctccgcccctatatgtaagcatccttttattagaggcaaagagttcttacat 30416941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 36073481 - 36073610
Alignment:
Q  11 ggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 110  Q
    ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| ||    
T  36073481 ggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 36073580  T
Q  111 tttttcttgataaaatcattcttgatatcta 141  Q
    |||||||| ||||||||||||||||||||||    
T  36073581 tttttctt-ataaaatcattcttgatatcta 36073610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 21802266 - 21802124
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgg---gtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtca 97  Q
    ||||||||| |||||||||||||||||||   |||||||||          ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  21802266 cagtctggccggaaatcatggggtggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtca 21802167  T
Q  98 tgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||    
T  21802166 tgtcattcttgaatctttctt-ataaaatcattcttgatatcta 21802124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 17655600 - 17655692
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  17655600 atgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatcta 17655692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 24128409 - 24128500
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24128409 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatcta 24128500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 44893108 - 44893017
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  44893108 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatcta 44893017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 44893596 - 44893687
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  44893596 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatcta 44893687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 46441969 - 46442105
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  46441969 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 46442068  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  46442069 tcttgaatttttctt-ataaaatcattcttgatatcta 46442105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 53123152 - 53123292
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatg 99  Q
    ||||||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| | |||||| |||| ||||    
T  53123152 cagtctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatg 53123251  T
Q  100 tcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  53123252 tcattcttgaatttttctt-ataaaatcattcttgatatcta 53123292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 37219801 - 37219893
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||| ||| |||||||||||| |||||| | || |||||||||||||||| |||||||||||||||||||||||||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatcta 37219893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 9088995 - 9089131
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| | |||||| |||| ||||||||    
T  9088995 ctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcat 9089094  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  9089095 tcttgaatttttctt-ataaaatcattcttgatatcta 9089131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 50156518 - 50156383
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| | |||||||||||    
T  50156518 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatgtcat 50156420  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  50156419 tcttgaatttttctt-ataaaatcattcttgatatcta 50156383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 11314144 - 11314055
Alignment:
Q  52 aaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||| |||||  |||||||||||||||| |||||||||||||||||  || |||||||||||||||||||||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatcta 11314055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 4751617 - 4751708
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||| ||| |||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  4751617 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttctt-ataaaattattcttgatatcta 4751708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 49387782 - 49387691
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| |||||||||| |||||||||||    
T  49387782 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcatccttgatatcta 49387691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 141
Target Start/End: Original strand, 42671840 - 42671930
Alignment:
Q  51 gaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||| |||||||||| |||||||||  |||||| | ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatcta 42671930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 47290191 - 47290327
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           |||||||  ||||||||||||||||||||||| |||||||| |||  ||||||||    
T  47290191 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcat 47290290  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  47290291 tcttgaatttttctt-ataaaatcattcttgatatcta 47290327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 22199429 - 22199520
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||  || |||||| ||||||||||||||||||||||    
T  22199429 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatcta 22199520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 36073121 - 36073212
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||| ||| |||| |||||||||||| |||||||||| ||||||||||| ||||||||||    
T  36073121 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttctt-ataaaatcatttttgatatcta 36073212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 30563334 - 30563452
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  30563334 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcat 30563433  T
Q  104 tcttaaatttttcttgata 122  Q
    |||| ||| ||||||||||    
T  30563434 tcttgaatctttcttgata 30563452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 2624958 - 2625098
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatg 99  Q
    ||||||||| ||||||||||| ||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| ||||  |||    
T  2624958 cagtctggccggaaatcatggagtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatg 2625057  T
Q  100 tcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||| || ||| |||||| ||||||||||||||||||||||    
T  2625058 tcatttttgaatctttctt-ataaaatcattcttgatatcta 2625098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 10442672 - 10442591
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  10442672 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 10442591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 24392854 - 24392935
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||||| |||||| ||||  ||||||||||||||| ||||||||| |||||||||||||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgat-aaatcattcttgatatcta 24392935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 31078714 - 31078623
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||||||||||||| |||||||||| | |||||| |||| |||||||||||| ||||||| || ||||||||||||||||||||||    
T  31078714 atgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttt-tttataaaatcattcttgatatcta 31078623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 37934837 - 37934745
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| || ||| |||||| ||||||||| || | |||||||    
T  37934837 atgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatcta 37934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 140
Target Start/End: Complemental strand, 23964359 - 23964269
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatct 140  Q
    ||||||| ||||||||||||| |||||||||| | |||||| | || |||||||||||||||| |||||| |||||||||||||||||||||    
T  23964359 atgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttctt-ataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 7745052 - 7744916
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||  ||||||||||||| |||||||||| |||||||| ||||  |||||||    
T  7745052 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcat 7744953  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| ||| |||||| ||||||||||||||||||||||    
T  7744952 tcttgaatctttctt-ataaaatcattcttgatatcta 7744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 33530579 - 33530488
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||||||||| |||||||||||||| |||||||| |||| ||||||||||||  || ||| || ||||||||||||||||||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttt-tttataaaatcattcttgatatcta 33530488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 7745100 - 7745165
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 7745165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 33530676 - 33530741
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| ||||||||||||||||||| ||||||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatat 33530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 4473126 - 4473076
Alignment:
Q  147 tctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  4473126 tctgtccctatatgtaagcacctttttattagaggcaaagagtgcttacat 4473076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 44744607 - 44744690
Alignment:
Q  54 aggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||| |||||||||||||||| | |||| || |||||||||||||| ||    |||||||||||||||| ||||||||||    
T  44744607 aggttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaa----tcttgataaaatcatttttgatatcta 44744690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 10442777 - 10442842
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 10442842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 23964453 - 23964518
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||| ||||||||||| ||||||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 23964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 31078807 - 31078872
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 31078872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 32564904 - 32564847
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 197  Q
    ||||||||| ||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  32564904 tactccctccgtccctatatgtaagcacccttttattagaggcaaagagtgcttacat 32564847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 36073349 - 36073276
Alignment:
Q  57 ttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcatt 130  Q
    ||||||||| ||||||||||||||| || |||| | || ||| |||||||||||| ||||||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatt 36073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 42671746 - 42671681
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||||||||||| ||||||||||| || |||||||    
T  42671746 aaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatat 42671681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 49387876 - 49387941
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 49387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 2624914 - 2624849
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||| |||||||| || |||||||||||||||| ||||||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatat 2624849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 21802310 - 21802375
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||  ||||||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 21802375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 22199338 - 22199273
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||||| |||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 22199273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 24392744 - 24392679
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | || |||||||||||| |||||||||||| |||||| ||||||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 24392679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 25063423 - 25063378
Alignment:
Q  96 catgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||    
T  25063423 catgtcattcttgaatctttcttgataaaatcattcttgatatcta 25063378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 36073024 - 36072959
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||| ||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 36072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 47290143 - 47290078
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 47290078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 50156566 - 50156631
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||||| |||||| ||||| ||||    
T  50156566 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatat 50156631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgata 137  Q
    ||||||||  ||||||| | ||||||||||||||||||| |||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 4751523 - 4751458
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||| ||| | || ||||||||||||  | |||||||||||||||| ||||||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 4751458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 7209058 - 7209115
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 197  Q
    ||||||||| |||||||||| ||||||| ||||||||||||  ||||| |||||||||    
T  7209058 tactccctcagtccctatatctaagcacttttttattagagacaaagagtgcttacat 7209115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 24128316 - 24128251
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||||| |||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 24128251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36073068 - 36073105
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36073068 cagtctggccggaaatcatggggtggtgggtgttatgt 36073105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 36073427 - 36073362
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  36073427 aaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 36073362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 44893503 - 44893438
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||| |||| |||||| ||||||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatat 44893438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 46441921 - 46441856
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || ||||||| | |||||| ||||||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatat 46441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 44893201 - 44893267
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattctt-aaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| |||||||| |||| |||||| ||||| ||||    
T  44893201 aaatctaagggtgattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatat 44893267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 53123108 - 53123042
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattctt-aaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| |||||||  |||| |||||| ||||||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatat 53123042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4751567 - 4751604
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  4751567 cagtctggtcggaaatcatggggtggtgggtgttatgt 4751604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 9088947 - 9088898
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 122  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 10442729 - 10442696
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||| ||||||||||||||||||||||||||||    
T  10442729 ctggccggaaatcatggggtggtgggtgttatgt 10442696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44744555 - 44744592
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  44744555 cagtctggccggaaatcatagggtggtgggtgttatgt 44744592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 53999016 - 53998988
Alignment:
Q  113 tttcttgataaaatcattcttgatatcta 141  Q
    |||||||||||||||||||||||||||||    
T  53999016 tttcttgataaaatcattcttgatatcta 53998988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 44094819 - 44094958
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 100  Q
    ||||||||| ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  44094819 cagtctggccggaaatcatggggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgt 44094918  T
Q  101 cattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||  || |||||| ||||||| ||||||||||||||    
T  44094919 cattcttggatctttctt-ataaaataattcttgatatcta 44094958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 37821729 - 37821638
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  37821729 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 37821638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 25973533 - 25973668
Alignment:
Q  4 tctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    |||||| | ||||||||||||||||||||||||||          ||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||    
T  25973533 tctggccgaaaatcatggggtggtgggtgttatgt-attttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcat 25973631  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  25973632 tcttgaatttttctt-ataaaatcattcttgatatcta 25973668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 36966652 - 36966512
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatg 99  Q
    ||||||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||    
T  36966652 cagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 36966553  T
Q  100 tcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    | |||||| |||||||||| ||||||||||||||||||||||    
T  36966552 ttattcttgaatttttctt-ataaaatcattcttgatatcta 36966512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 51737675 - 51737766
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  51737675 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 51737766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 19015529 - 19015662
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  19015529 ctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 19015628  T
Q  104 tcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||| |||||||||||||||||||    
T  19015629 tcttgaatttttctt-ataaaatcattcttgatat 19015662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 18404618 - 18404709
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||||||||||||||||||||||||  ||||||| |||| |||||||||||||||| |||||| ||||||||||||||||||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatcta 18404709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 41876337 - 41876246
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||||  ||||||||||| |||||||||| ||||||||||||||||||||||    
T  41876337 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 41876246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 6883612 - 6883748
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| ||||| || | || ||||||||    
T  6883612 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcat 6883711  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  6883712 tcttgaatttttctt-ataaaatcattcttgatatcta 6883748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 32000151 - 32000070
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||| ||| ||||||||| |||||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatcta 32000070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 33786516 - 33786435
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||| ||| ||||||||| |||||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatcta 33786435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 40215113 - 40215249
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||  |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  40215113 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 40215212  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| ||| |||||| ||||||||||||||||||||||    
T  40215213 tcttgaatctttctt-ataaaatcattcttgatatcta 40215249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 40273888 - 40273969
Alignment:
Q  59 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||| ||| ||||||||| |||||||||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatcta 40273969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 9910186 - 9910095
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| ||||||||| || ||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  9910186 atgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 9910095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 20305025 - 20304934
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| || ||||||||||||||||||||| |||||||| |||| |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  20305025 atgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 20304934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 25463801 - 25463937
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 103  Q
    ||||| ||||||||||||||||||||||||||||           ||||||| ||||||||||||||| |||||||| |||||||| |||| ||||||||    
T  25463801 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcat 25463900  T
Q  104 tcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||  || |||||| ||||||||||||||||||||||    
T  25463901 tcttggatctttctt-ataaaatcattcttgatatcta 25463937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 44690914 - 44690825
Alignment:
Q  52 aaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| ||||||||| |||||| |||||||||||||||| | || |||||||||||| ||| |||||||||||||||||| ||||||||||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatcta 44690825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 3559787 - 3559878
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||| ||| |||||||| |||||||| ||||||||  || |||||| ||||||||||||||||||||||    
T  3559787 atgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttctt-ataaaatcattcttgatatcta 3559878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 27523195 - 27523062
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    ||||| ||||||||||||||| ||||||||||||          |||||| |||||||||| ||||| ||||| ||||||||||| | || |||   |||    
T  27523195 ctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaagttaataaataagactaaaatcaaagggtgattaatctgccatacgatt 27523096  T
Q  105 cttaaatttttcttgataaaatcattcttgatat 138  Q
    ||| ||| ||||||||||||||||||||||||||    
T  27523095 cttgaatctttcttgataaaatcattcttgatat 27523062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 19722970 - 19722903
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||| |||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 19722903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 40273779 - 40273711
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||||||||||||| | || |||||||||||| |||||||||||| |||||| |||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatcta 40273711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 27523243 - 27523306
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgat 136  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||||||||||  ||||||||    
T  27523243 aaatttaagggtgattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgat 27523306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 10167577 - 10167658
Alignment:
Q  57 ttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||| |||||||||||||| |||||||| ||| |||| | |||||||||| ||| || |||||||||||||| ||||    
T  10167577 ttaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatat 10167658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 16045786 - 16045851
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 16045851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 25463753 - 25463688
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatat 25463688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 32000255 - 32000320
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||| ||| | ||||||||||||||| |||||||||||| |||||| ||||||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatat 32000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 40215065 - 40215000
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 40215000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 33786623 - 33786690
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||| |||||||||||| |||| |||||||||||| ||| ||||||||| |||||||||||||||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatcta 33786690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 52064445 - 52064381
Alignment:
Q  77 ctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||||||||| || | ||||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatcta 52064381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 3559694 - 3559629
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||| |||||||||||| | || ||||||||||||||| |||| ||||||||||| ||||||||||    
T  3559694 aaatttaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 3559629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 18404519 - 18404454
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||| |||||||| | |  ||||||||||||||| |||||||||||||||| ||||||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatat 18404454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 44094775 - 44094710
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||  ||||||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 44094710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 9910281 - 9910346
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||||| |||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 9910346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 19015481 - 19015416
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||| |||||||| || ||||||||| |||||| ||||||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatat 19015416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 36966696 - 36966761
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||| |||||||| || ||||||||| |||||| ||||||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatat 36966761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 37821822 - 37821887
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||| |||||||| || ||||||||| |||||| ||||||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatat 37821887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 41876434 - 41876495
Alignment:
Q  77 ctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||| | || ||||||||||||||| |||| |||| |||||| ||||||||||    
T  41876434 ctaagggtgattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatat 41876495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 52329445 - 52329503
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 107  Q
    |||||| |||||||| | ||||||||||||||||||||||| | ||  |||||||||||    
T  52329445 atgaaacgttaataattaagactgaaatctaagggtgattattctgctatgtcattctt 52329503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 6883564 - 6883499
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || ||||||| | |||||| ||||| ||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatat 6883499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 25973490 - 25973426
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || | |||||||||| || ||||| |||||||||| ||||||||||    
T  25973490 aaatctaagggtgattattctg-cctgtcattcttgaaattttcatgataaaatctttcttgatat 25973426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44690973 - 44690936
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatgt 38  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  44690973 cagtctggccggaaatcatggggtgttgggtgttatgt 44690936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 7255208 - 7255168
Alignment:
Q  141 actccctctgtccctatatgtaagcacctttttattagagg 181  Q
    |||||||| || |||||||||||||||| ||||||||||||    
T  7255208 actccctccgttcctatatgtaagcacccttttattagagg 7255168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9910237 - 9910201
Alignment:
Q  1 cagtctggctggaaatcatggggtggtgggtgttatg 37  Q
    |||| |||| |||||||||||||||||||||||||||    
T  9910237 cagtatggccggaaatcatggggtggtgggtgttatg 9910201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 13012 - 13103
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13012 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatcta 13103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 12919 - 12854
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    |||||||||| |||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 12854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 11791 - 11882
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  11791 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatcta 11882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 11698 - 11633
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | ||||||||||||||| || |||||||||||||||| ||||||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 11633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 65; Significance: 1e-28; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 26106 - 26197
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  26106 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 26197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 16154 - 16245
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| | |||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  16154 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 16245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 4566 - 4657
Alignment:
Q  49 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  4566 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatcta 4657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 4473 - 4408
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||||| |||||| ||||||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 4408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 47975 - 48110
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    ||||| ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| | |||||| ||||  ||||||||    
T  47975 ctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcatt 48074  T
Q  105 cttaaatttttcttgataaaatcattcttgatatcta 141  Q
    ||| ||| |||||| ||||||||||||||||||||||    
T  48075 cttgaatctttctt-ataaaatcattcttgatatcta 48110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 47927 - 47863
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgata 137  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| |||||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgata 47863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 41136 - 41271
Alignment:
Q  5 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 104  Q
    ||||| ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||  ||| |||||    
T  41136 ctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcatt 41235  T
Q  105 cttaaatttttcttgataaaatcattcttgatatcta 141  Q
    |||  || |||||| ||||||||||||||||||||||    
T  41236 cttggatctttctt-ataaaatcattcttgatatcta 41271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 41088 - 41023
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || |||||||||||| || |||| ||||||||||| ||||||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 41023  T

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Target: scaffold0665 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 3145 - 3080
Alignment:
Q  73 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 138  Q
    ||||||||||||||||| | || ||||||||||||||| |||| ||||||||||| ||||||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatat 3080  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 504665 - 504626
Alignment:
Q  141 actccctctgtccctatatgtaagcacctttttattagag 180  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  504665 actccctccgtccctatatgtaagcacctttttattagag 504626  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 143351 - 143408
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 197  Q
    |||| ||||||||||||||||||| |||| |||||||||||| ||||  |||||||||    
T  143351 tacttcctctgtccctatatgtaaacacccttttattagaggcaaaggatgcttacat 143408  T

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Target: scaffold0064 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 59475 - 59434
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttttattagagg 181  Q
    |||||||||  |||||||||||||||||| ||||||||||||    
T  59475 tactccctccatccctatatgtaagcacccttttattagagg 59434  T

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Target: scaffold0263 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 13373 - 13405
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttt 172  Q
    ||||||||| |||||||||||||||||||||||    
T  13373 tactccctccgtccctatatgtaagcacctttt 13405  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 92001 - 92033
Alignment:
Q  140 tactccctctgtccctatatgtaagcacctttt 172  Q
    ||||||||| |||||||||||||||||||||||    
T  92001 tactccctccgtccctatatgtaagcacctttt 92033  T

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