View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17755_high_58 (Length: 248)
Name: NF17755_high_58
Description: NF17755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17755_high_58 |
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Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 23212278 - 23212502
Alignment:
| Q |
16 |
ttccttacgttacgtcgaatcaacttccactaggagtaacaatacagaagcttttatttggaagaattacagtgattgatgatgaaattacaaaaggtta |
115 |
Q |
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| T |
23212278 |
ttccttacgttacgtcgaatcaacttccactaggagtaacaatacagaagcttttatttggaagaattacagtgattgatgatgaaattacaaaaggtta |
23212377 |
T |
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| Q |
116 |
tgagttgaattcagatgttattggtaaagtacaaggatttcatttggttagttcattggatggaagcagtcaaaccatggcatttactgctttgtttggt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23212378 |
tgagttgaattcagatgttattggtaaagtacaaggatttcatttggttagttcattggatggaagcagtcaaaccatggcatttactgctttgtttggt |
23212477 |
T |
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| Q |
216 |
gatgaaagtcatgatgatgatgatg |
240 |
Q |
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||||||||||||||||||||||||| |
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| T |
23212478 |
gatgaaagtcatgatgatgatgatg |
23212502 |
T |
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