View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17755_high_61 (Length: 243)
Name: NF17755_high_61
Description: NF17755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17755_high_61 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 40960511 - 40960753
Alignment:
| Q |
1 |
aaggaattgttggtacatcttaaaatgattcacatgttagataaatatctcagaatgcactttcagaaaactacttgtgtaccgcaaaaatgctagatgt |
100 |
Q |
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| T |
40960511 |
aaggaattgttggtacatcttaaaatgattcacatgttagataaatatctcagaatgcactttcagaaaactacttgtgtaccgcaaaaatgctagatgt |
40960610 |
T |
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| Q |
101 |
tttcgaaagcctcctatgctgtttggtttttaactgatgcatatagcttcatgtaacttttgaaagattaatctggctgttgattccgtggttgtttact |
200 |
Q |
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| T |
40960611 |
tttcgaaagcctcctatgctgtttggtttttaactgatgcatatagcttcatgtaacttttgaaagattaatctggctgttgattccgtggttgtttact |
40960710 |
T |
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| Q |
201 |
aaatatttggactccaggaaggtttgactgctgaggaattacc |
243 |
Q |
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| T |
40960711 |
aaatatttggactccaggaaggtttgactgctgaggaattacc |
40960753 |
T |
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