View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17755_high_67 (Length: 237)

Name: NF17755_high_67
Description: NF17755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17755_high_67
NF17755_high_67
[»] chr7 (12 HSPs)
chr7 (1-221)||(39537727-39537947)
chr7 (16-221)||(39547192-39547397)
chr7 (15-221)||(39338923-39339129)
chr7 (15-221)||(39353766-39353972)
chr7 (32-221)||(1084529-1084718)
chr7 (1-221)||(39563823-39564043)
chr7 (18-221)||(39366349-39366552)
chr7 (37-209)||(39588917-39589089)
chr7 (17-212)||(39574446-39574641)
chr7 (136-209)||(39621784-39621857)
chr7 (142-222)||(42132691-42132771)
chr7 (153-222)||(42171500-42171569)
[»] chr2 (4 HSPs)
chr2 (109-212)||(44210676-44210779)
chr2 (37-212)||(44233698-44233873)
chr2 (37-212)||(44222876-44223051)
chr2 (170-221)||(43457037-43457088)
[»] chr8 (1 HSPs)
chr8 (145-221)||(4501673-4501749)
[»] chr4 (4 HSPs)
chr4 (41-222)||(2877767-2877948)
chr4 (41-222)||(2887290-2887471)
chr4 (145-222)||(2896883-2896960)
chr4 (166-206)||(53668677-53668717)
[»] chr1 (1 HSPs)
chr1 (175-222)||(2160336-2160383)
[»] scaffold0210 (1 HSPs)
scaffold0210 (166-222)||(8751-8807)
[»] chr3 (1 HSPs)
chr3 (166-222)||(49669993-49670049)


Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 39537947 - 39537727
Alignment:
Q  1 tttatcaatgctgctaagtttgaaactgacctatgcttgcagatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39537947 tttatcaatgctgctaagtttgaaactgacctatgcttgcagatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattag 39537848  T
Q  101 taggactacctggtgttagcagtctctcaacggagcagcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatga 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39537847 taggactacctggtgttagcagtctctcaacggagcagcgcaaaaggctgactattgcagttgagttggttgctaatccttctataatattcatggatga 39537748  T
Q  201 gccaacttctggacttgatgc 221  Q
    |||||||||||||||||||||    
T  39537747 gccaacttctggacttgatgc 39537727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 39547397 - 39547192
Alignment:
Q  16 aagtttgaaactgacctatgcttgcagatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggtg 115  Q
    |||||||||| |||| |||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  39547397 aagtttgaaaatgacttatgcttgtagatgttcattgaggaagtaatggaacttgtggaactgaaaccactgcaaaacgcaatagtaggactacctggtg 39547298  T
Q  116 ttagcagtctctcaacggagcagcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctggact 215  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39547297 ttagcggtctctcaacggagcagcgcaaaaggctgactattgcagttgagttggttgctaatccttctataatattcatggatgagccaacttctggact 39547198  T
Q  216 tgatgc 221  Q
    ||||||    
T  39547197 tgatgc 39547192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 39338923 - 39339129
Alignment:
Q  15 taagtttgaaactgacctatgcttgcagatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggt 114  Q
    ||||||||||| |||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  39338923 taagtttgaaaatgacttatgcttgaagatgttcattgaggaagtcatggaacttgtggaactgaaaccactgcaaaacgcaatagtaggactacctggt 39339022  T
Q  115 gttagcagtctctcaacggagcagcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctggac 214  Q
    |||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  39339023 gttagcggtctctcaacggagcagcgcaaaaggctgactgttgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctgggc 39339122  T
Q  215 ttgatgc 221  Q
    | |||||    
T  39339123 tagatgc 39339129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 39353766 - 39353972
Alignment:
Q  15 taagtttgaaactgacctatgcttgcagatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggt 114  Q
    ||||||||||| |||| ||| |||| |||||||| |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||    
T  39353766 taagtttgaaaatgacttatacttgaagatgttcgttgaggaagtcatggaacttgtggaactgaaaccactgcgaaatgcattagtaggacttcctggt 39353865  T
Q  115 gttagcagtctctcaacggagcagcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctggac 214  Q
    ||| || ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  39353866 gtttgcggtctctcaatggagcagcgcaaaaggctgactgttgcagttgagttggttgctaatccttcaataatattcatggatgaaccaacttctgggc 39353965  T
Q  215 ttgatgc 221  Q
    | |||||    
T  39353966 tagatgc 39353972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 32 - 221
Target Start/End: Complemental strand, 1084718 - 1084529
Alignment:
Q  32 tatgcttgcagatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggtgttagcagtctctcaac 131  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||    
T  1084718 tatgcttatagatgttcattgaggaagtcatggaacttgtggaactgaaatcagtgcgaaacgcattagtaggactacctggtgttagcagtctctcaac 1084619  T
Q  132 ggagcagcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctggacttgatgc 221  Q
     ||| |||  |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||| || |||||    
T  1084618 agagtagcacaaaaggctgactattgcagttgagttggtttctaatccttctataatatttatggatgagccaacttctgggctagatgc 1084529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 39564043 - 39563823
Alignment:
Q  1 tttatcaatgctgctaagtttgaaactgacctatgcttgcagatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattag 100  Q
    |||||||||| | | |||||||||||| |   ||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  39564043 tttatcaatgttaccaagtttgaaactaattaatggttgcagatgttcgttgaggaagtcatggaacttgtggaactgaaaccactgcaaaacgcattag 39563944  T
Q  101 taggactacctggtgttagcagtctctcaacggagcagcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatga 200  Q
    ||||||| ||||||||||   ||||||| ||||||||||| ||| || |||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  39563943 taggactgcctggtgttaatggtctctcgacggagcagcgcaaacggttgacaattgcagttgagttggtagctaatccttcaataatattcatggatga 39563844  T
Q  201 gccaacttctggacttgatgc 221  Q
     ||||||||||| || |||||    
T  39563843 accaacttctgggctagatgc 39563823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 39366349 - 39366552
Alignment:
Q  18 gtttgaaactgacctatgcttgcagatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggtgtt 117  Q
    |||||||||||||  ||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||  | |||||||||||||| |||||||||    
T  39366349 gtttgaaactgactaatgcttgcagatgtttattgaggaagtcatggaacttgtggaactgaaaccgctacgatatgcattagtaggactgcctggtgtt 39366448  T
Q  118 agcagtctctcaacggagcagcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctggacttg 217  Q
    ||  ||||||| || |||||||| |||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |    
T  39366449 agtggtctctcgacagagcagcgcaaaaggctaactgttgcagttgaattggtagctaatccttcaataatattcatggatgagccaacttctgggctag 39366548  T
Q  218 atgc 221  Q
    ||||    
T  39366549 atgc 39366552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 209
Target Start/End: Complemental strand, 39589089 - 39588917
Alignment:
Q  37 ttgcagatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggtgttagcagtctctcaacggagc 136  Q
    ||||||||||||||||| ||||||||||| |||||||| || || || ||  || | ||| | || ||| | || || |||||  |||| || |||||||    
T  39589089 ttgcagatgttcattgaggaagtcatggagcttgtggagctaaacccgcttagggatgcaattgtcggattgccaggggttagtggtctatcgacggagc 39588990  T
Q  137 agcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttc 209  Q
    | || |||||| ||||  ||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  39588989 aacgcaaaaggttgacagttgcagttgagttagtggctaatccttctataatattcatggatgagccaacttc 39588917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 212
Target Start/End: Complemental strand, 39574641 - 39574446
Alignment:
Q  17 agtttgaaactgacctatgcttgcagatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggtgt 116  Q
    |||||| | |||||| ||| || ||||||||  |||| ||||||||||| || |||||  |||| ||| || || | ||||  || || || || ||| |    
T  39574641 agtttggagctgaccaatggttacagatgtttgttgaggaagtcatggagctagtggagttgaacccattgagggatgcatatgttggtctcccaggtat 39574542  T
Q  117 tagcagtctctcaacggagcagcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctgg 212  Q
    || | |||| ||||| ||||||||||||||  ||||||||||||||||  ||||   ||||||||| || ||||||||||||||||||||||||||    
T  39574541 taacggtctatcaactgagcagcgtaaaagattgactattgcagttgaactggtgtgtaatccttctatcatattcatggatgagccaacttctgg 39574446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 39621857 - 39621784
Alignment:
Q  136 cagcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttc 209  Q
    ||||| |||||| |||||||||| || ||||| || || |||||||||||||| ||||||||||||||||||||    
T  39621857 cagcgaaaaaggttgactattgcggtcgagttagtggcaaatccttcaataatgttcatggatgagccaacttc 39621784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 42132771 - 42132691
Alignment:
Q  142 aaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctggacttgatgct 222  Q
    |||||||| |||||||| || || ||||||||||| |||||||| || ||||||||||| ||||| || || |||||||||    
T  42132771 aaaaggcttactattgctgtggaattggttgctaacccttcaatcatcttcatggatgaaccaacatcaggccttgatgct 42132691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 42171569 - 42171500
Alignment:
Q  153 tattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctggacttgatgct 222  Q
    |||||| || || ||||||||||| |||||||| || ||||||||||| ||||| || || |||||||||    
T  42171569 tattgctgtggaattggttgctaacccttcaatcatcttcatggatgaaccaacatcaggccttgatgct 42171500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 44210779 - 44210676
Alignment:
Q  109 cctggtgttagcagtctctcaacggagcagcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaactt 208  Q
    |||||||||||  ||||||||||||| || ||||||||| ||||||||||||||||  | || |||||||| || ||||| ||||||||||| |||||||    
T  44210779 cctggtgttagtggtctctcaacggaacaacgtaaaaggttgactattgcagttgaactagtggctaatccgtccataattttcatggatgaaccaactt 44210680  T
Q  209 ctgg 212  Q
    ||||    
T  44210679 ctgg 44210676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 212
Target Start/End: Complemental strand, 44233873 - 44233698
Alignment:
Q  37 ttgcagatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggtgttagcagtctctcaacggagc 136  Q
    ||||||||||| ||||| ||||||||||| || ||||| |||||  || || ||||| |  |||| ||  | |||||||| ||  |||||||||| || |    
T  44233873 ttgcagatgtttattgacgaagtcatggatctagtggagctgaactcattgaggaactctctagttggtttgcctggtgtgagtggtctctcaactgaac 44233774  T
Q  137 agcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctgg 212  Q
    |||| || || |||||||||||||||||  | || |||||||| || ||||| || ||||||||||| ||||||||    
T  44233773 agcgcaagagactgactattgcagttgaacttgtggctaatccatctataatttttatggatgagcctacttctgg 44233698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 212
Target Start/End: Complemental strand, 44223051 - 44222876
Alignment:
Q  37 ttgcagatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggtgttagcagtctctcaacggagc 136  Q
    ||||||||||| ||||| ||||||||||| || ||||| |||||  |  || ||||| |  |||| ||  | |||||||| ||  |||||||||| || |    
T  44223051 ttgcagatgtttattgatgaagtcatggatctagtggagctgaactcgttgaggaactctctagttggtttgcctggtgtgagtggtctctcaactgaac 44222952  T
Q  137 agcgtaaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctgg 212  Q
    |||| || || |||||||||||||| ||  | || |||||||| || ||||| |||||||||||||| ||||||||    
T  44222951 agcgcaagagactgactattgcagtcgaacttgtggctaatccatctataattttcatggatgagcctacttctgg 44222876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 43457088 - 43457037
Alignment:
Q  170 ttgctaatccttcaataatattcatggatgagccaacttctggacttgatgc 221  Q
    |||||||||||||||| || ||||||||||| |||||||| || ||||||||    
T  43457088 ttgctaatccttcaatcattttcatggatgaaccaacttcaggtcttgatgc 43457037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 4501673 - 4501749
Alignment:
Q  145 aggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctggacttgatgc 221  Q
    |||||||| ||||| || ||| | ||||||||||||||||| |||||||||||||||||||||||||| || |||||    
T  4501673 aggctgacaattgcggtcgagcttgttgctaatccttcaatcatattcatggatgagccaacttctggtctagatgc 4501749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 222
Target Start/End: Original strand, 2877767 - 2877948
Alignment:
Q  41 agatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggtgttagcagtctctcaacggagcagcg 140  Q
    ||||||||||||| ||||| |||||||| || || ||||| || ||| ||||| || |||| ||  | |||||||| ||| |||| ||||| || || ||    
T  2877767 agatgttcattgaggaagttatggaactagtcgagctgaatccgctgaggaactcactagttggtttgcctggtgtgagcggtctttcaaccgaacaacg 2877866  T
Q  141 taaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctggacttgatgct 222  Q
     || ||| | |||||| ||||||| || || || ||||| || ||||| |||||||| ||||| || |||||| | ||||||    
T  2877867 caagaggttaactatttcagttgaattagtggccaatccatccataattttcatggacgagcctacatctggattagatgct 2877948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 222
Target Start/End: Original strand, 2887290 - 2887471
Alignment:
Q  41 agatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggtgttagcagtctctcaacggagcagcg 140  Q
    ||||||||||||| |||||||||||||| ||||| || || ||| || | ||| | || || ||  | |||||||| |   |||| ||||| || || ||    
T  2887290 agatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaacg 2887389  T
Q  141 taaaaggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctggacttgatgct 222  Q
     || ||||| |||||||||||||| || || || ||||| || ||||| |||||||||||||| || |||||| | ||||||    
T  2887390 caagaggctaactattgcagttgaattagtggccaatccatccataattttcatggatgagcctacatctggattagatgct 2887471  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 2896960 - 2896883
Alignment:
Q  145 aggctgactattgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctggacttgatgct 222  Q
    ||||| |||||||||||||| || || || ||||| || ||||| |||||||||||||| || |||||| | ||||||    
T  2896960 aggctaactattgcagttgaattagtggccaatccatccataattttcatggatgagcctacatctggattagatgct 2896883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 53668717 - 53668677
Alignment:
Q  166 ttggttgctaatccttcaataatattcatggatgagccaac 206  Q
    |||||||||||||||||||| || ||||||||||| |||||    
T  53668717 ttggttgctaatccttcaatcatcttcatggatgaaccaac 53668677  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 2160383 - 2160336
Alignment:
Q  175 aatccttcaataatattcatggatgagccaacttctggacttgatgct 222  Q
    ||||| || ||||||||||||||||||||||| ||||| |||||||||    
T  2160383 aatccatcgataatattcatggatgagccaacctctggccttgatgct 2160336  T

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Target: scaffold0210 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 8751 - 8807
Alignment:
Q  166 ttggttgctaatccttcaataatattcatggatgagccaacttctggacttgatgct 222  Q
    ||||||||||| |||||||| |||||||||||||| ||| | || || |||||||||    
T  8751 ttggttgctaacccttcaatcatattcatggatgaaccatcatcaggccttgatgct 8807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 49669993 - 49670049
Alignment:
Q  166 ttggttgctaatccttcaataatattcatggatgagccaacttctggacttgatgct 222  Q
    ||||||||||| ||||||||||| ||||| ||||| ||||| || || |||||||||    
T  49669993 ttggttgctaacccttcaataatcttcatagatgaaccaacatcaggccttgatgct 49670049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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