View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17755_low_32 (Length: 391)
Name: NF17755_low_32
Description: NF17755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17755_low_32 |
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Alignment Details
Target: chr1 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 26 - 366
Target Start/End: Original strand, 51583455 - 51583794
Alignment:
| Q |
26 |
ttaggttaatgttctactatattttaagaaggttgctattttgtagtgctgtgaaaacttgtgaattgatgatgaacacatttagcataaatggatgatg |
125 |
Q |
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| T |
51583455 |
ttaggttaatgttctactatgttttaagaaggttgctattttgtagtgctgtgaacacttgtgaattgatgatgaacacatttagcataaatggatgatg |
51583554 |
T |
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| Q |
126 |
agacaaaatacttttccactttcccaacataactcttgaaggctaaaatcctatagcnnnnnnnnatattataatggcaacttaaaaataaacaaaaact |
225 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
51583555 |
agacaaaatacttttccactttcccaacataactcttgaaggctaaaatcctatagcttttttt-atattataatggcaacttaaaaataaacaaaaact |
51583653 |
T |
|
| Q |
226 |
ttcaaccccgaaatacaaataccctaaatttgcaagtgtacaaaatttatgctatttaaaggaaatttatcaactcatctttcctcattattcgtcataa |
325 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
51583654 |
ttcaaccccgaaatacaaataccctaaatttgcaagtgtacagaatttatgctatttaaaggaaattgatcaactcatctttcctcattattcgtcataa |
51583753 |
T |
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| Q |
326 |
gccattgcatcctgggtgtcaaaatattcataattatcttc |
366 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
51583754 |
gccattgcatcctgggtgtcaaaatattcataattatcttc |
51583794 |
T |
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