View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17755_low_45 (Length: 345)

Name: NF17755_low_45
Description: NF17755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17755_low_45
NF17755_low_45
[»] chr5 (44 HSPs)
chr5 (82-345)||(7016738-7017000)
chr5 (82-250)||(21147106-21147274)
chr5 (88-250)||(5272924-5273086)
chr5 (82-250)||(33656040-33656208)
chr5 (96-250)||(849186-849341)
chr5 (88-250)||(139312-139474)
chr5 (82-250)||(27458949-27459116)
chr5 (88-217)||(32157899-32158031)
chr5 (89-217)||(14000111-14000239)
chr5 (82-217)||(1152102-1152237)
chr5 (116-250)||(6460831-6460965)
chr5 (89-217)||(13926003-13926131)
chr5 (89-217)||(39852417-39852545)
chr5 (92-217)||(4550266-4550391)
chr5 (89-208)||(7947579-7947698)
chr5 (82-250)||(9689697-9689864)
chr5 (137-217)||(14465281-14465361)
chr5 (148-217)||(4240517-4240586)
chr5 (89-212)||(5949185-5949298)
chr5 (269-345)||(33656269-33656346)
chr5 (148-208)||(1461203-1461263)
chr5 (276-345)||(21146970-21147040)
chr5 (143-217)||(22746369-22746443)
chr5 (269-345)||(32158125-32158202)
chr5 (276-344)||(9689565-9689633)
chr5 (278-345)||(43319149-43319218)
chr5 (148-208)||(40013767-40013827)
chr5 (276-345)||(5273194-5273265)
chr5 (276-345)||(6460695-6460765)
chr5 (280-342)||(26795638-26795701)
chr5 (282-342)||(28594449-28594511)
chr5 (159-210)||(37013993-37014044)
chr5 (276-345)||(27459182-27459252)
chr5 (82-250)||(9220716-9220874)
chr5 (280-334)||(4550494-4550549)
chr5 (280-334)||(14000342-14000397)
chr5 (280-342)||(26806702-26806765)
chr5 (89-132)||(37014051-37014094)
chr5 (269-330)||(139191-139253)
chr5 (280-341)||(26806581-26806643)
chr5 (289-342)||(27786226-27786280)
chr5 (280-332)||(37013830-37013883)
chr5 (278-333)||(1511587-1511643)
chr5 (277-309)||(6460816-6460848)
[»] chr8 (56 HSPs)
chr8 (82-345)||(24501812-24502074)
chr8 (82-250)||(26374429-26374597)
chr8 (82-250)||(42938116-42938284)
chr8 (82-250)||(42735276-42735444)
chr8 (82-250)||(2704818-2704986)
chr8 (82-250)||(7506898-7507066)
chr8 (82-239)||(42937401-42937558)
chr8 (82-250)||(23115168-23115335)
chr8 (83-250)||(10392237-10392404)
chr8 (82-250)||(5576619-5576788)
chr8 (82-212)||(4403184-4403314)
chr8 (89-217)||(9288463-9288591)
chr8 (89-217)||(14782141-14782269)
chr8 (89-217)||(44725816-44725944)
chr8 (89-217)||(10295386-10295515)
chr8 (89-217)||(26856139-26856267)
chr8 (82-250)||(41479136-41479294)
chr8 (89-217)||(43166696-43166824)
chr8 (82-250)||(43959696-43959854)
chr8 (92-217)||(18958736-18958861)
chr8 (89-217)||(19717887-19718015)
chr8 (92-217)||(39467477-39467602)
chr8 (88-210)||(4950021-4950143)
chr8 (159-250)||(32711358-32711449)
chr8 (82-209)||(39189815-39189940)
chr8 (148-217)||(16362268-16362337)
chr8 (89-217)||(18305977-18306095)
chr8 (92-209)||(13478258-13478376)
chr8 (89-217)||(7466407-7466525)
chr8 (269-345)||(24214817-24214894)
chr8 (89-217)||(32497597-32497715)
chr8 (276-345)||(7507132-7507202)
chr8 (108-211)||(8410421-8410526)
chr8 (276-345)||(23115401-23115471)
chr8 (276-345)||(26373708-26373778)
chr8 (276-345)||(41479000-41479070)
chr8 (276-345)||(42735510-42735580)
chr8 (269-341)||(42938343-42938416)
chr8 (148-212)||(42305850-42305914)
chr8 (276-345)||(43959560-43959631)
chr8 (159-217)||(4031334-4031392)
chr8 (276-345)||(26374661-26374731)
chr8 (159-217)||(31623767-31623825)
chr8 (284-345)||(42937263-42937325)
chr8 (148-217)||(37857191-37857260)
chr8 (82-146)||(9770439-9770503)
chr8 (276-345)||(2705052-2705122)
chr8 (269-345)||(32711508-32711585)
chr8 (280-334)||(32497397-32497452)
chr8 (282-345)||(8543422-8543487)
chr8 (276-344)||(5576854-5576923)
chr8 (280-334)||(14782372-14782427)
chr8 (280-334)||(44726047-44726102)
chr8 (94-132)||(32711305-32711343)
chr8 (280-332)||(18958964-18959017)
chr8 (280-332)||(39467704-39467757)
[»] chr7 (97 HSPs)
chr7 (82-337)||(39219376-39219630)
chr7 (83-260)||(43581090-43581266)
chr7 (82-250)||(7718361-7718529)
chr7 (82-250)||(7719259-7719427)
chr7 (82-250)||(18914734-18914902)
chr7 (82-250)||(30440836-30441004)
chr7 (82-250)||(34695313-34695481)
chr7 (82-250)||(40996648-40996816)
chr7 (82-250)||(973224-973392)
chr7 (82-250)||(44343395-44343563)
chr7 (82-250)||(47914306-47914474)
chr7 (82-250)||(12893448-12893616)
chr7 (82-250)||(47879208-47879376)
chr7 (82-212)||(32142916-32143046)
chr7 (82-215)||(34009088-34009221)
chr7 (82-250)||(20275262-20275430)
chr7 (82-217)||(10068533-10068668)
chr7 (82-213)||(7113529-7113660)
chr7 (112-213)||(43679491-43679592)
chr7 (89-217)||(23101364-23101492)
chr7 (89-217)||(28342413-28342541)
chr7 (89-217)||(3022992-3023120)
chr7 (89-217)||(28034811-28034939)
chr7 (89-217)||(29614770-29614898)
chr7 (89-217)||(39784165-39784293)
chr7 (89-217)||(9882243-9882370)
chr7 (89-217)||(18838455-18838583)
chr7 (82-217)||(12740439-12740573)
chr7 (110-217)||(12963767-12963874)
chr7 (92-211)||(33382709-33382828)
chr7 (89-211)||(7993214-7993336)
chr7 (82-211)||(43187356-43187485)
chr7 (89-217)||(8675399-8675527)
chr7 (113-212)||(25805763-25805862)
chr7 (150-250)||(31638915-31639015)
chr7 (89-198)||(37972873-37972982)
chr7 (82-250)||(9179913-9180071)
chr7 (89-198)||(41827389-41827498)
chr7 (101-216)||(727587-727692)
chr7 (92-212)||(44256775-44256895)
chr7 (89-342)||(509598-509840)
chr7 (117-217)||(32883848-32883948)
chr7 (148-212)||(44121965-44122029)
chr7 (82-217)||(3797066-3797191)
chr7 (150-217)||(19251605-19251672)
chr7 (276-345)||(8078299-8078369)
chr7 (138-337)||(10676475-10676673)
chr7 (269-345)||(31638779-31638856)
chr7 (148-217)||(40460772-40460841)
chr7 (89-208)||(19810874-19810983)
chr7 (146-217)||(46405494-46405565)
chr7 (110-212)||(1470261-1470362)
chr7 (276-345)||(44343629-44343699)
chr7 (148-217)||(37327993-37328062)
chr7 (89-211)||(29585586-29585698)
chr7 (269-345)||(32143145-32143223)
chr7 (99-177)||(10617024-10617102)
chr7 (276-337)||(18914968-18915030)
chr7 (276-345)||(30440700-30440770)
chr7 (276-345)||(34695135-34695205)
chr7 (159-217)||(47066770-47066828)
chr7 (159-212)||(17001099-17001152)
chr7 (269-345)||(47879072-47879149)
chr7 (269-345)||(47914170-47914247)
chr7 (276-345)||(973087-973158)
chr7 (276-345)||(43679373-43679444)
chr7 (276-345)||(20275496-20275566)
chr7 (276-345)||(43581323-43581393)
chr7 (269-345)||(727416-727493)
chr7 (148-217)||(33892315-33892384)
chr7 (148-217)||(39028163-39028232)
chr7 (153-212)||(447854-447913)
chr7 (269-345)||(34008919-34008993)
chr7 (280-334)||(39784007-39784062)
chr7 (276-345)||(12893312-12893382)
chr7 (92-154)||(44623295-44623357)
chr7 (276-332)||(29893033-29893090)
chr7 (269-337)||(43187569-43187638)
chr7 (280-335)||(3634236-3634292)
chr7 (276-345)||(7113360-7113430)
chr7 (276-345)||(40996882-40996953)
chr7 (282-341)||(41827215-41827275)
chr7 (280-331)||(46405668-46405720)
chr7 (282-342)||(9599072-9599134)
chr7 (282-342)||(9826643-9826705)
chr7 (276-342)||(19251439-19251506)
chr7 (280-334)||(37327835-37327890)
chr7 (280-334)||(48117830-48117885)
chr7 (280-333)||(7993051-7993105)
chr7 (282-334)||(23101206-23101259)
chr7 (282-334)||(28342255-28342308)
chr7 (280-332)||(29615001-29615054)
chr7 (280-332)||(34115478-34115531)
chr7 (280-331)||(39028008-39028060)
chr7 (277-309)||(43581240-43581272)
chr7 (277-309)||(47879193-47879225)
chr7 (277-309)||(47914291-47914323)
[»] chr6 (30 HSPs)
chr6 (82-250)||(6197477-6197645)
chr6 (82-250)||(1391662-1391830)
chr6 (83-250)||(2300738-2300905)
chr6 (82-217)||(29076670-29076805)
chr6 (82-217)||(29111644-29111779)
chr6 (82-250)||(28002703-28002871)
chr6 (89-217)||(31895767-31895895)
chr6 (82-208)||(7051925-7052051)
chr6 (89-309)||(34759056-34759275)
chr6 (89-212)||(34773485-34773608)
chr6 (89-217)||(14262439-14262567)
chr6 (89-217)||(7497147-7497274)
chr6 (89-212)||(31067569-31067682)
chr6 (269-345)||(2300964-2301041)
chr6 (89-217)||(30385075-30385191)
chr6 (276-345)||(6197711-6197781)
chr6 (148-197)||(4200492-4200541)
chr6 (276-345)||(1391526-1391596)
chr6 (276-345)||(29076499-29076570)
chr6 (276-345)||(29111472-29111543)
chr6 (276-342)||(7051750-7051817)
chr6 (82-131)||(2238668-2238717)
chr6 (280-336)||(5957148-5957205)
chr6 (83-123)||(11113733-11113773)
chr6 (280-334)||(31895609-31895664)
chr6 (280-334)||(34773322-34773377)
chr6 (141-250)||(657003-657101)
chr6 (280-333)||(31609697-31609751)
chr6 (168-212)||(3848286-3848330)
chr6 (276-331)||(28002581-28002637)
[»] chr3 (97 HSPs)
chr3 (82-250)||(10139146-10139314)
chr3 (82-250)||(20498247-20498415)
chr3 (82-259)||(54625622-54625798)
chr3 (82-250)||(996086-996254)
chr3 (82-250)||(3999645-3999813)
chr3 (82-250)||(19253865-19254033)
chr3 (82-250)||(33807798-33807967)
chr3 (82-250)||(3206205-3206373)
chr3 (82-250)||(37820477-37820645)
chr3 (82-250)||(6589602-6589770)
chr3 (82-250)||(29448858-29449026)
chr3 (82-250)||(44762037-44762205)
chr3 (88-250)||(33996547-33996709)
chr3 (82-250)||(35337773-35337939)
chr3 (82-217)||(40246915-40247050)
chr3 (82-217)||(6035053-6035188)
chr3 (82-250)||(25418404-25418572)
chr3 (82-250)||(53929128-53929296)
chr3 (83-217)||(52114600-52114734)
chr3 (89-217)||(18749683-18749811)
chr3 (97-250)||(51699495-51699647)
chr3 (89-212)||(54628920-54629043)
chr3 (89-211)||(40897221-40897343)
chr3 (82-211)||(5825139-5825268)
chr3 (89-217)||(26107332-26107460)
chr3 (89-217)||(32580247-32580375)
chr3 (89-217)||(36674137-36674265)
chr3 (89-212)||(34484037-34484160)
chr3 (90-250)||(29030044-29030203)
chr3 (102-309)||(51737746-51737952)
chr3 (137-250)||(1440007-1440120)
chr3 (82-170)||(6131233-6131321)
chr3 (89-217)||(11431597-11431725)
chr3 (89-217)||(17946359-17946487)
chr3 (89-217)||(44906520-44906648)
chr3 (117-216)||(22057834-22057933)
chr3 (89-217)||(52617978-52618100)
chr3 (82-217)||(27899415-27899540)
chr3 (89-212)||(31646293-31646414)
chr3 (89-217)||(48379228-48379356)
chr3 (89-217)||(50903247-50903375)
chr3 (82-193)||(1439894-1440005)
chr3 (89-217)||(52810449-52810577)
chr3 (82-216)||(52079999-52080117)
chr3 (114-208)||(55235264-55235359)
chr3 (93-217)||(20833063-20833187)
chr3 (276-345)||(20498112-20498181)
chr3 (148-212)||(10660611-10660675)
chr3 (82-217)||(39842494-39842619)
chr3 (148-331)||(10728707-10728889)
chr3 (269-345)||(3206423-3206500)
chr3 (89-217)||(39038111-39038229)
chr3 (276-345)||(996319-996389)
chr3 (276-345)||(19253729-19253799)
chr3 (82-132)||(33807680-33807730)
chr3 (89-217)||(37454932-37455050)
chr3 (276-344)||(37820711-37820780)
chr3 (269-345)||(1440179-1440255)
chr3 (278-345)||(12734076-12734144)
chr3 (154-217)||(539476-539539)
chr3 (276-345)||(10139380-10139450)
chr3 (159-217)||(23753463-23753521)
chr3 (276-345)||(35337637-35337707)
chr3 (269-337)||(44762264-44762333)
chr3 (148-217)||(50762116-50762185)
chr3 (269-345)||(6589465-6589543)
chr3 (83-157)||(44276506-44276580)
chr3 (270-345)||(29029908-29029984)
chr3 (280-342)||(10105019-10105082)
chr3 (280-342)||(10216166-10216229)
chr3 (280-342)||(10225795-10225858)
chr3 (100-217)||(6975817-6975924)
chr3 (276-345)||(29449094-29449164)
chr3 (269-345)||(33808026-33808106)
chr3 (276-345)||(40246746-40246816)
chr3 (269-332)||(12103545-12103609)
chr3 (161-217)||(23535890-23535946)
chr3 (280-334)||(10660448-10660503)
chr3 (280-334)||(31646522-31646577)
chr3 (280-334)||(36674368-36674423)
chr3 (284-342)||(45215410-45215469)
chr3 (276-334)||(52810333-52810392)
chr3 (280-341)||(10225674-10225736)
chr3 (276-337)||(15493965-15494027)
chr3 (286-345)||(22057665-22057726)
chr3 (280-333)||(23753624-23753678)
chr3 (280-333)||(28146264-28146318)
chr3 (280-332)||(11431441-11431494)
chr3 (280-332)||(27240481-27240534)
chr3 (276-332)||(38772292-38772349)
chr3 (280-332)||(44906751-44906804)
chr3 (89-146)||(45862983-45863040)
chr3 (301-341)||(50901200-50901241)
chr3 (283-342)||(6035293-6035353)
chr3 (280-331)||(18749486-18749538)
chr3 (269-309)||(44276328-44276368)
chr3 (277-309)||(44762188-44762220)
[»] chr2 (56 HSPs)
chr2 (82-250)||(24776395-24776563)
chr2 (82-250)||(5093049-5093217)
chr2 (82-250)||(16269731-16269899)
chr2 (82-250)||(20605276-20605444)
chr2 (82-250)||(31170626-31170794)
chr2 (82-250)||(14198579-14198747)
chr2 (82-345)||(9120072-9120334)
chr2 (88-250)||(35317102-35317264)
chr2 (82-250)||(12407420-12407588)
chr2 (82-250)||(43847686-43847854)
chr2 (82-250)||(305467-305635)
chr2 (102-250)||(1789482-1789630)
chr2 (82-250)||(22551765-22551933)
chr2 (88-213)||(32125330-32125455)
chr2 (89-217)||(28844628-28844756)
chr2 (89-217)||(33135696-33135823)
chr2 (82-250)||(44765815-44765974)
chr2 (89-212)||(18177345-18177468)
chr2 (89-217)||(10657479-10657607)
chr2 (105-217)||(26788859-26788971)
chr2 (89-212)||(25288237-25288360)
chr2 (89-197)||(43078656-43078764)
chr2 (89-217)||(28740302-28740420)
chr2 (148-217)||(7026677-7026746)
chr2 (82-208)||(10125302-10125418)
chr2 (269-345)||(14198805-14198882)
chr2 (269-345)||(24776259-24776336)
chr2 (269-345)||(32125154-32125231)
chr2 (89-211)||(13833441-13833553)
chr2 (150-250)||(26601270-26601370)
chr2 (276-345)||(20605056-20605126)
chr2 (148-211)||(379016-379079)
chr2 (159-217)||(6224626-6224684)
chr2 (276-345)||(16269595-16269665)
chr2 (276-345)||(31170860-31170930)
chr2 (276-345)||(35316966-35317036)
chr2 (276-345)||(44765679-44765749)
chr2 (89-217)||(3463745-3463863)
chr2 (269-345)||(12407284-12407361)
chr2 (276-345)||(305702-305773)
chr2 (282-345)||(22552005-22552069)
chr2 (280-345)||(378883-378949)
chr2 (276-345)||(1789346-1789416)
chr2 (159-217)||(3574920-3574978)
chr2 (270-344)||(19144929-19145004)
chr2 (269-333)||(26601429-26601494)
chr2 (280-342)||(3858191-3858254)
chr2 (280-342)||(18176474-18176537)
chr2 (280-334)||(26788699-26788754)
chr2 (280-334)||(28844470-28844525)
chr2 (280-332)||(215465-215518)
chr2 (89-146)||(6224576-6224633)
chr2 (168-217)||(21370638-21370687)
chr2 (282-334)||(43078590-43078643)
chr2 (301-333)||(17330880-17330912)
chr2 (277-309)||(32125275-32125307)
[»] scaffold0400 (2 HSPs)
scaffold0400 (82-250)||(15033-15201)
scaffold0400 (276-328)||(15267-15320)
[»] scaffold0365 (2 HSPs)
scaffold0365 (82-250)||(15676-15844)
scaffold0365 (276-328)||(15910-15963)
[»] scaffold0113 (1 HSPs)
scaffold0113 (82-345)||(38895-39157)
[»] scaffold0004 (1 HSPs)
scaffold0004 (82-345)||(102039-102302)
[»] scaffold0151 (2 HSPs)
scaffold0151 (82-250)||(38605-38772)
scaffold0151 (277-345)||(38755-38824)
[»] chr4 (97 HSPs)
chr4 (82-250)||(25331169-25331337)
chr4 (82-250)||(55302881-55303049)
chr4 (82-214)||(41881082-41881214)
chr4 (83-250)||(32950837-32951004)
chr4 (82-250)||(1044845-1045013)
chr4 (82-217)||(41320881-41321016)
chr4 (82-250)||(1112931-1113099)
chr4 (82-250)||(7007412-7007580)
chr4 (82-250)||(12112983-12113151)
chr4 (82-250)||(30009677-30009845)
chr4 (82-217)||(34228583-34228718)
chr4 (82-250)||(42786722-42786890)
chr4 (82-212)||(39479355-39479485)
chr4 (111-344)||(25445996-25446227)
chr4 (82-250)||(22202053-22202221)
chr4 (82-250)||(37046450-37046620)
chr4 (112-217)||(7249795-7249900)
chr4 (112-250)||(28541736-28541874)
chr4 (82-250)||(46635648-46635810)
chr4 (82-250)||(3436631-3436799)
chr4 (82-217)||(53275910-53276046)
chr4 (82-198)||(24130981-24131098)
chr4 (82-239)||(31314742-31314889)
chr4 (89-217)||(5441475-5441603)
chr4 (89-217)||(27768127-27768255)
chr4 (89-217)||(54341215-54341343)
chr4 (107-217)||(19740933-19741043)
chr4 (89-309)||(54853475-54853693)
chr4 (89-217)||(37828409-37828537)
chr4 (137-250)||(23464993-23465106)
chr4 (82-214)||(27454078-27454210)
chr4 (89-217)||(32322162-32322290)
chr4 (89-217)||(48261198-48261326)
chr4 (139-250)||(25504696-25504807)
chr4 (89-217)||(51320992-51321120)
chr4 (83-212)||(40537161-40537280)
chr4 (92-217)||(37915898-37916023)
chr4 (91-211)||(44770862-44770982)
chr4 (119-217)||(9163147-9163245)
chr4 (89-342)||(23987161-23987403)
chr4 (89-176)||(8711978-8712065)
chr4 (82-217)||(39307253-39307388)
chr4 (89-211)||(56445362-56445474)
chr4 (82-157)||(11090435-11090510)
chr4 (89-217)||(41725196-41725321)
chr4 (89-211)||(12913301-12913413)
chr4 (89-176)||(24736447-24736534)
chr4 (146-217)||(29649731-29649802)
chr4 (150-217)||(36479299-36479366)
chr4 (269-345)||(39479584-39479661)
chr4 (269-345)||(40537372-40537449)
chr4 (276-345)||(41881317-41881388)
chr4 (276-345)||(24131206-24131276)
chr4 (126-211)||(28371001-28371086)
chr4 (269-345)||(28541600-28541677)
chr4 (89-217)||(30967316-30967434)
chr4 (269-345)||(32951063-32951140)
chr4 (269-337)||(34228809-34228878)
chr4 (269-345)||(37046679-37046756)
chr4 (126-198)||(20021423-20021495)
chr4 (277-345)||(42786669-42786739)
chr4 (276-345)||(1044712-1044782)
chr4 (276-345)||(22201917-22201987)
chr4 (276-345)||(30009911-30009981)
chr4 (159-217)||(32684065-32684123)
chr4 (159-217)||(49834890-49834948)
chr4 (269-345)||(7007275-7007352)
chr4 (269-345)||(7250000-7250077)
chr4 (276-345)||(19741142-19741211)
chr4 (148-217)||(28483970-28484039)
chr4 (89-217)||(49501526-49501646)
chr4 (89-217)||(49507591-49507711)
chr4 (276-345)||(46635876-46635947)
chr4 (159-217)||(5800049-5800107)
chr4 (276-341)||(20021250-20021316)
chr4 (276-345)||(25331033-25331103)
chr4 (269-345)||(31314955-31315032)
chr4 (148-217)||(50018322-50018391)
chr4 (269-345)||(55302745-55302822)
chr4 (88-197)||(41581795-41581903)
chr4 (276-333)||(25504873-25504931)
chr4 (276-344)||(23464856-23464927)
chr4 (280-342)||(28100587-28100651)
chr4 (280-344)||(30967537-30967602)
chr4 (280-344)||(37915688-37915753)
chr4 (276-332)||(1112807-1112865)
chr4 (280-334)||(5441317-5441372)
chr4 (284-342)||(28847111-28847170)
chr4 (280-342)||(41761995-41762058)
chr4 (280-342)||(44646737-44646800)
chr4 (280-334)||(54341057-54341112)
chr4 (269-337)||(12913133-12913202)
chr4 (282-334)||(27767969-27768022)
chr4 (280-332)||(37828640-37828693)
chr4 (277-310)||(55302865-55302898)
chr4 (277-309)||(7007397-7007429)
chr4 (277-309)||(32950987-32951019)
[»] chr1 (82 HSPs)
chr1 (82-250)||(19451808-19451976)
chr1 (82-250)||(21222179-21222347)
chr1 (82-250)||(45760009-45760177)
chr1 (82-250)||(50192550-50192719)
chr1 (82-217)||(6304252-6304387)
chr1 (82-217)||(47654351-47654486)
chr1 (82-213)||(49198269-49198400)
chr1 (82-250)||(28824373-28824540)
chr1 (82-250)||(35279704-35279872)
chr1 (87-250)||(49418116-49418279)
chr1 (82-250)||(35679128-35679296)
chr1 (82-250)||(45535976-45536150)
chr1 (82-253)||(29556133-29556305)
chr1 (82-250)||(47780743-47780911)
chr1 (82-212)||(31572197-31572327)
chr1 (92-249)||(32588963-32589120)
chr1 (89-217)||(6312639-6312767)
chr1 (89-217)||(29396395-29396523)
chr1 (82-217)||(9577432-9577567)
chr1 (92-217)||(51701645-51701770)
chr1 (89-217)||(48177469-48177597)
chr1 (82-217)||(37014640-37014775)
chr1 (90-217)||(46328107-46328234)
chr1 (117-250)||(730180-730314)
chr1 (89-217)||(25612222-25612350)
chr1 (89-212)||(28387400-28387523)
chr1 (89-212)||(9322507-9322630)
chr1 (89-212)||(15835060-15835183)
chr1 (111-217)||(48524384-48524490)
chr1 (82-217)||(33025578-33025703)
chr1 (148-334)||(38536155-38536340)
chr1 (148-334)||(38558373-38558558)
chr1 (150-209)||(955823-955882)
chr1 (82-212)||(48668785-48668905)
chr1 (276-345)||(730045-730114)
chr1 (269-345)||(28824599-28824676)
chr1 (276-345)||(953715-953785)
chr1 (269-345)||(21222044-21222121)
chr1 (148-217)||(29219351-29219420)
chr1 (269-345)||(35679355-35679432)
chr1 (276-345)||(48524216-48524285)
chr1 (269-345)||(49198494-49198571)
chr1 (138-217)||(51085860-51085939)
chr1 (159-217)||(18798556-18798614)
chr1 (276-345)||(19452084-19452154)
chr1 (276-345)||(22183266-22183336)
chr1 (276-345)||(35279568-35279638)
chr1 (276-345)||(49417980-49418050)
chr1 (269-345)||(45760237-45760314)
chr1 (276-345)||(47654587-47654658)
chr1 (280-342)||(49230785-49230848)
chr1 (275-332)||(32589187-32589245)
chr1 (92-212)||(45272656-45272765)
chr1 (269-345)||(47780515-47780592)
chr1 (168-217)||(49230951-49231000)
chr1 (280-342)||(42657730-42657793)
chr1 (280-342)||(51826841-51826904)
chr1 (280-345)||(6304492-6304558)
chr1 (159-209)||(31622536-31622586)
chr1 (90-192)||(38319996-38320098)
chr1 (159-217)||(47784451-47784509)
chr1 (276-345)||(50192785-50192855)
chr1 (148-217)||(5495162-5495231)
chr1 (284-339)||(27198290-27198346)
chr1 (280-334)||(6312481-6312536)
chr1 (280-334)||(8141366-8141421)
chr1 (280-334)||(9322738-9322793)
chr1 (280-334)||(15835291-15835346)
chr1 (280-342)||(19007584-19007647)
chr1 (284-342)||(19893467-19893526)
chr1 (269-343)||(29556006-29556077)
chr1 (280-345)||(31572401-31572467)
chr1 (280-332)||(5495334-5495387)
chr1 (280-336)||(9577670-9577727)
chr1 (276-328)||(14494122-14494175)
chr1 (82-119)||(48524805-48524842)
chr1 (93-157)||(5495117-5495181)
chr1 (90-146)||(18798607-18798663)
chr1 (280-331)||(29219198-29219250)
chr1 (280-331)||(29396626-29396678)
chr1 (277-309)||(45760160-45760192)
chr1 (277-309)||(47780728-47780760)
[»] scaffold0037 (2 HSPs)
scaffold0037 (85-247)||(100253-100415)
scaffold0037 (284-345)||(100114-100176)
[»] scaffold0276 (1 HSPs)
scaffold0276 (83-214)||(540-671)
[»] scaffold1504 (1 HSPs)
scaffold1504 (89-217)||(936-1063)
[»] scaffold0543 (2 HSPs)
scaffold0543 (89-212)||(10637-10760)
scaffold0543 (280-334)||(10474-10529)
[»] scaffold0110 (1 HSPs)
scaffold0110 (89-212)||(39624-39747)
[»] scaffold0054 (2 HSPs)
scaffold0054 (89-210)||(36914-37035)
scaffold0054 (276-334)||(37057-37116)
[»] scaffold0042 (2 HSPs)
scaffold0042 (89-212)||(58083-58206)
scaffold0042 (276-334)||(58268-58327)
[»] scaffold0839 (1 HSPs)
scaffold0839 (102-188)||(3712-3798)
[»] scaffold0306 (1 HSPs)
scaffold0306 (148-332)||(13840-14023)
[»] scaffold0152 (1 HSPs)
scaffold0152 (148-332)||(21304-21487)
[»] scaffold0922 (2 HSPs)
scaffold0922 (152-217)||(4272-4337)
scaffold0922 (269-309)||(4182-4222)
[»] scaffold0347 (2 HSPs)
scaffold0347 (82-157)||(14892-14967)
scaffold0347 (280-332)||(14811-14864)
[»] scaffold0651 (1 HSPs)
scaffold0651 (269-345)||(8665-8742)
[»] scaffold0287 (1 HSPs)
scaffold0287 (280-335)||(11793-11849)
[»] scaffold0007 (1 HSPs)
scaffold0007 (140-209)||(199905-199974)


Alignment Details
Target: chr5 (Bit Score: 155; Significance: 3e-82; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 82 - 345
Target Start/End: Original strand, 7016738 - 7017000
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  7016738 caattctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7016837  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagacnnnnnnnnaaattaaaaagag 281  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||| || |||||||        ||||| |||||||    
T  7016838 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaat-actacaagac-tttttttaaattgaaaagag 7016935  T
Q  282 tcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  7016936 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 7017000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 21147274 - 21147106
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  21147274 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 21147175  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  21147174 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 21147106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 88 - 250
Target Start/End: Original strand, 5272924 - 5273086
Alignment:
Q  88 taagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5272924 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcg 5273023  T
Q  188 aaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||| |||||||||||||||||||       || |||||||||||| ||||||||||    
T  5273024 aaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaata 5273086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 33656040 - 33656208
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  33656040 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33656139  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| ||||||||||||| ||||        ||||||||||||||| ||||||||||    
T  33656140 ccttcgaaatttgaatgattttgaataccattagattttttttaagtgattaagagtcttgattgaata 33656208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 96 - 250
Target Start/End: Complemental strand, 849341 - 849186
Alignment:
Q  96 ctcatgttttt-atgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttg 194  Q
    ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  849341 ctcatgtttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctatcaaaatctgatttattaaacaatccttcgaaatttg 849242  T
Q  195 aataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||| ||||||||||||| |||||       ||||||||||||||| ||||||||||    
T  849241 aatgattttgaataccattagactttttttaagtgattaagagtcttgattgaata 849186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 88 - 250
Target Start/End: Complemental strand, 139474 - 139312
Alignment:
Q  88 taagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 187  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| || | |||||||| |||||||||||||||||||| |||||||||||||||||||    
T  139474 taagaaatctcatgtttttatgaaagactttttcatattaaaatttcactggaaaatccaacaaaatccatcaaaatctggtttattaaacaatccttcg 139375  T
Q  188 aaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||| |||||||||||||||||||       |||||||||| |||| ||||||||||    
T  139374 aaatttgaatgattttgaataccactagactttttttaagtgattaaaagtcttgattgaata 139312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 27458949 - 27459116
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||| ||||||||| ||||| || ||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||    
T  27458949 caatcctaagaaatatcatgttttcatgaatgattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaat 27459048  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||| |||| ||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  27459049 ccttcaaaatctgaatgattttgaataccactagac-ttttttaagtgattaagagtcttgattgaata 27459116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 88 - 217
Target Start/End: Original strand, 32157899 - 32158031
Alignment:
Q  88 taagaaatctcatgtttttatgaaagact---ttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcct 184  Q
    |||||||||||||||||| ||||||||||   ||||| ||||||||||  | |||||||||||||||||||| ||||||||| |||||||||||||||||    
T  32157899 taagaaatctcatgttttcatgaaagactattttttcgtgctaaaattttactagaaaatcccacaaaatccgtcaaaatctaatttattaaacaatcct 32157998  T
Q  185 tcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||| |||||||||||||||||||    
T  32157999 tcgaaatttgaatgattttgaataccactagac 32158031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 14000111 - 14000239
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  14000111 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 14000210  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  14000211 aatttgaatgattttgaataccacaagac 14000239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 1152102 - 1152237
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||||| |||| || |||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||    
T  1152102 caatcttaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaat 1152201  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    || ||||||||||||| |||||||||||||| ||||    
T  1152202 ccctcgaaatttgaatgattttgaataccacaagac 1152237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 116 - 250
Target Start/End: Complemental strand, 6460965 - 6460831
Alignment:
Q  116 tttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactag 215  Q
    ||||||||| ||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  6460965 tttttcatgataaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaaaccttcgaaatttgaatgattttgaataccactag 6460866  T
Q  216 acnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |        || |||||||||||| ||||||||||    
T  6460865 attttttttaaatgattaagagtcttgattgaata 6460831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 13926131 - 13926003
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||| |||| ||||  |||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  13926131 aagaaatatcatcttttcttgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 13926032  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  13926031 aatttgaatgattttgaataccacaagac 13926003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 39852545 - 39852417
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||| ||||||||||||||||  ||||| |||||||||||||||    
T  39852545 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttagtaaacaatccttcga 39852446  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  39852445 aatttgaatgattttgaataccacaagac 39852417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 4550266 - 4550391
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| |||| |||||||||| |||| || ||||||| || || ||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  4550266 aaatctcatcttttcatgaaagactctttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 4550365  T
Q  192 ttgaataattttgaataccactagac 217  Q
    |||||| |||||||||||||| ||||    
T  4550366 ttgaatgattttgaataccacaagac 4550391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 7947579 - 7947698
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||| | |||| ||||||||||||||| || ||||||| || || ||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  7947579 aagaaatctcttcttttcatgaaagactttttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcga 7947678  T
Q  189 aatttgaataattttgaata 208  Q
    ||||||||| ||||||||||    
T  7947679 aatttgaatgattttgaata 7947698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 9689864 - 9689697
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||| |||||||||||||||||||||||||  |||||||  |  |||||||| |||| ||||||||||||||| |||||| |||||||    
T  9689864 caatcataagaaatcttatgtttttatgaaagactttttcataataaaattttacaagaaaatctcacacaatccatcaaaatctaatttatcaaacaat 9689765  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | |||||||||| ||| ||||| |||||||| ||||       ||||||| ||||||| ||||||||||    
T  9689764 cattcgaaattt-aatgattttaaataccacaagactttttttaagtgatgaagagtcttgattgaata 9689697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 14465281 - 14465361
Alignment:
Q  137 tagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  14465281 tagaaaattccacaaaattcatcaaaatccgatttattaaacaatctttcgaaatttgaatgattttgaataccacaagac 14465361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 4240517 - 4240586
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  4240517 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 4240586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 5949298 - 5949185
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||          | ||||||||||||||||||  |||||||||||||||||||||    
T  5949298 aagaaatctcatcttttcatgaaagactttttcttgttaaaattaca----------ctacaaaatccatcaaaatccaatttattaaacaatccttcga 5949209  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| ||||||||||||||    
T  5949208 aatttgaatgattttgaataccac 5949185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 33656269 - 33656346
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||| ||||| ||||| |||||||||||||||||||||||||    
T  33656269 aaattgaaaagagtcttgattgaataccacaagactttttcatgataaaaaaatcttttaaaatcccttaaaatcatg 33656346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 1461203 - 1461263
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaata 208  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||    
T  1461203 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaata 1461263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 21147040 - 21146970
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  21147040 aaagagtcttgattgaataccacacgactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 21146970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 22746443 - 22746369
Alignment:
Q  143 atcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||||||||   ||||||||||||||| |||||||||||||| |||||||||| ||| ||||    
T  22746443 atcccacaaaatccatcaaaattcaatttattaaacaatcattcgaaatttgaatgattttgaatatcacaagac 22746369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 32158125 - 32158202
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  32158125 aaattgaaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatg 32158202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 344
Target Start/End: Complemental strand, 9689633 - 9689565
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgataaaaagtcttttaaaatcccttaaaatcat 344  Q
    |||||||||||||||||||| ||| |||||||| || ||||||||||| ||||||||||||| ||||||    
T  9689633 aaagagtcttgattgaataccacaagactttttcataataaaaagtctattaaaatcccttagaatcat 9689565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 43319218 - 43319149
Alignment:
Q  278 agagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||| ||| |||||||| |||||  ||||||||||||||||||||||| |||||||    
T  43319218 agagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatg 43319149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 40013767 - 40013827
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaata 208  Q
    ||||||||||| ||||||  ||| |||||||||||||||||||||||||| ||||||||||    
T  40013767 acaaaatccattaaaatccaattgattaaacaatccttcgaaatttgaatgattttgaata 40013827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 5273194 - 5273265
Alignment:
Q  276 aaagagtcttgattgaatacaacatgactttttt-atgataaaa-agtcttttaaaatcccttaaaatcatg 345  Q
    ||||| |||||||||||||| ||| || |||||| ||||||||| |||||||||||||||||||||||||||    
T  5273194 aaagaatcttgattgaataccacaagatttttttcatgataaaaaagtcttttaaaatcccttaaaatcatg 5273265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 6460765 - 6460695
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| || || ||||| ||||||||||||||||| |||||||    
T  6460765 aaagagtcttgattgaataccacaagactttttcattataaaaaaatcttttaaaatcccttagaatcatg 6460695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 26795638 - 26795701
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||| ||| || |||||||| || |||||||||||||||||||||| |||||    
T  26795638 agtcttgattgaataccacaagatttttttataataaaaaagtcttttaaaatcccttgaaatc 26795701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 28594449 - 28594511
Alignment:
Q  282 tcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||| ||| ||||||||||| ||  |||||||||||||||||| |||||||||    
T  28594449 tcttgattgaataccacaagacttttttataataaaaaaagtcttttaaaatctcttaaaatc 28594511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 37014044 - 37013993
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaatacc 210  Q
    |||||||  ||||||||||||| |||||||||||||||| ||||||||||||    
T  37014044 caaaatccaatttattaaacaacccttcgaaatttgaatgattttgaatacc 37013993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 27459182 - 27459252
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||  |||||||| ||||| ||||||| ||||||||||| ||| |||||||    
T  27459182 aaagagtcttgattgaatactacgagactttttcatgataaaaaagttttttaaaatccgttagaatcatg 27459252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 9220716 - 9220874
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||| ||||||||| | ||||||||||||| || |||||||  | || ||||||| |          |||| ||| ||| ||||||||||    
T  9220716 caatcctaagaaatatcatgttttcacgaaagactttttcgtgttaaaattttactataaaatccta----------caaattctaattcattaaacaat 9220805  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||| ||||||||||| |||||||||| ||  ||||       ||||||| ||||||| ||||||||||    
T  9220806 ccttagaaatttgaatgattttgaatatcataagactttttttaagtgataaagagtcttgattgaata 9220874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 4550494 - 4550549
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||||    
T  4550494 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 4550549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 14000342 - 14000397
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||||    
T  14000342 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 14000397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 26806702 - 26806765
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgataaaa-agtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||  ||| || |||||||| |||||| |||||||||||||||||| |||||    
T  26806702 agtcttgattgaatatcacaagatttttttataataaaaaagtcttttaaaatcccttgaaatc 26806765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 37014094 - 37014051
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatt 132  Q
    |||||||||||| |||||||||||||||||||| || |||||||    
T  37014094 aagaaatctcatctttttatgaaagactttttcttgttaaaatt 37014051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 139253 - 139191
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaa 330  Q
    ||||| ||||||||||||||||||||| | | |||||||| || || ||||||||||||||||    
T  139253 aaattgaaaagagtcttgattgaatactaaaagactttttcattataaaaaagtcttttaaaa 139191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 341
Target Start/End: Original strand, 26806581 - 26806643
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaat 341  Q
    |||||||||||||||| ||| ||||||||||| || ||||||| ||||||||| |||| ||||    
T  26806581 agtcttgattgaataccacaagacttttttataatcaaaaagttttttaaaattccttgaaat 26806643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 27786280 - 27786226
Alignment:
Q  289 tgaatacaacatgacttttttatgataaaaa-gtcttttaaaatcccttaaaatc 342  Q
    ||||||| ||| ||||||||||| ||||||| ||||||||||||||||| |||||    
T  27786280 tgaataccacaagacttttttataataaaaaagtcttttaaaatcccttgaaatc 27786226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 37013883 - 37013830
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  37013883 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 37013830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 1511587 - 1511643
Alignment:
Q  278 agagtcttgattgaatacaacatgacttttttatgataaaaa-gtcttttaaaatcc 333  Q
    ||||||||||||||| || ||| |||||||| || ||||||| ||||||||||||||    
T  1511587 agagtcttgattgaacaccacaagactttttcataataaaaatgtcttttaaaatcc 1511643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 6460848 - 6460816
Alignment:
Q  277 aagagtcttgattgaatacaacatgactttttt 309  Q
    ||||||||||||||||||| |||||||||||||    
T  6460848 aagagtcttgattgaatacgacatgactttttt 6460816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 1e-72; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 82 - 345
Target Start/End: Original strand, 24501812 - 24502074
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  24501812 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 24501911  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagacnnnnnnnnaaattaaaaagag 281  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||| || |||||||        |||| | |||||     
T  24501912 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaat-accacaagac-tttttttaaatgataaagaa 24502009  T
Q  282 tcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||  ||| |||||||| ||||| ||||||||||||||||||| ||| |||||||    
T  24502010 tcttgattgaataacacaagactttttcatgataaaaaagtcttttaaaatcctttagaatcatg 24502074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 26374429 - 26374597
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||    
T  26374429 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 26374528  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  26374529 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 26374597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 42938116 - 42938284
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  42938116 caatcctaagaaatctcatgttttcatgaaagactttttcaggctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 42938215  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  42938216 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 42938284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 42735276 - 42735444
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  42735276 caatcctaagaaatctcatgtttttatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 42735375  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
     ||||||||||||||| |||||||||||||||||||       ||||||||||||||| | ||||||||    
T  42735376 acttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaata 42735444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 2704818 - 2704986
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||||||||||||||||    
T  2704818 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatatcactagaaaatcccacaaaatccatcaaaatttgatttattaaacaat 2704917  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | |||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  2704918 cattcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 2704986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 7506898 - 7507066
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  7506898 caatcctaagaaatctcatgtttacatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7506997  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||| ||||||||||  ||||||||||||||||||       ||||||||||||||| ||||||||||    
T  7506998 ccttcaaaatttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaata 7507066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 82 - 239
Target Start/End: Complemental strand, 42937558 - 42937401
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  42937558 caatcataagaaatctcatgttttcatgaaagactttttaatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 42937459  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtc 239  Q
    |||||||||||||||| |||||||||||||||||||       |||||||||||||||    
T  42937458 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc 42937401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 23115168 - 23115335
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23115168 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 23115267  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||| |||||||||| | |||||||||||||||||       ||||||||||||||| ||||||||||    
T  23115268 ccttccaaatttgaatga-tttgaataccactagactttttttaagtgattaagagtcttgattgaata 23115335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 83 - 250
Target Start/End: Original strand, 10392237 - 10392404
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  10392237 aatcctaataaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 10392336  T
Q  183 cttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||||||||||| ||| |||||||||||||||       |||||||||| |||| ||||||||||    
T  10392337 cttcgaaatttgaatgattctgaataccactagacttttcttaagtgattaaaagtcttgattgaata 10392404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 5576619 - 5576788
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||    
T  5576619 caatcctaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctggtttattaaacaat 5576718  T
Q  182 ccttcgaaatttgaataattttgaataccactagac-nnnnnnnaagtgattaagagtcatgattgaata 250  Q
     ||||||||||||||| ||||||||||||||| |||        ||||||||||||||| ||||||||||    
T  5576719 tcttcgaaatttgaatgattttgaataccacttgacttttttttaagtgattaagagtcttgattgaata 5576788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 4403314 - 4403184
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| |||||||||||| |||| ||||||||||||||| || ||||||| || || |||||||||||||||||||||||| |  ||||||||||||||    
T  4403314 caatcccaagaaatctcatattttcatgaaagactttttcttgttaaaattacactaaaaaatcccacaaaatccatcaaaacccaatttattaaacaat 4403215  T
Q  182 ccttcgaaatttgaataattttgaataccac 212  Q
    |||||||||||||||| ||||||||||||||    
T  4403214 ccttcgaaatttgaatgattttgaataccac 4403184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 9288463 - 9288591
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  9288463 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 9288562  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  9288563 aatttgaatgattttgaataccacaagac 9288591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 14782141 - 14782269
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  14782141 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 14782240  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  14782241 aatttgaatgattttgaataccacaagac 14782269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 44725816 - 44725944
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  44725816 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 44725915  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  44725916 aatttgaatgattttgaataccacaagac 44725944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 10295386 - 10295515
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaa-tccatcaaaatctgatttattaaacaatccttcg 187  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  10295386 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaaatccatcaaaatccaatttattaaacaatccttcg 10295485  T
Q  188 aaatttgaataattttgaataccactagac 217  Q
    |||||||||| |||||||||||||| ||||    
T  10295486 aaatttgaatgattttgaataccacaagac 10295515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 26856267 - 26856139
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || ||||| |||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  26856267 aagaaatcttatttttttctgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatacttcga 26856168  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  26856167 aatttgaatgattttgaataccacaagac 26856139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 41479294 - 41479136
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||  | |||||||||||||||||||          ||||||||||||||||    
T  41479294 caatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaattttactagaaaatcccacaaaatc----------tgatttattaaacaat 41479205  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | |||||||||||||| ||||||||||||| |||||       ||||||||||||||| ||||||||||    
T  41479204 cattcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattgaata 41479136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 43166696 - 43166824
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| ||  | ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  43166696 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 43166795  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  43166796 aatttgaatgattttgaataccacaagac 43166824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 43959854 - 43959696
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||||    
T  43959854 caatcataagaaatctcatgttttaattaaagactttttcatgctaaaatttca----------ccacaaaatccatcaaaatctgatttattaaacaat 43959765  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | |||||||||||||| ||||||||||||||||| |       |||||||||||| || ||||||||||    
T  43959764 cattcgaaatttgaatgattttgaataccactagtcttttttgaagtgattaagaatcttgattgaata 43959696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 18958736 - 18958861
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    |||||| || |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  18958736 aaatctaatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaatccttcgaaat 18958835  T
Q  192 ttgaataattttgaataccactagac 217  Q
    |||||| |||||||||||||| ||||    
T  18958836 ttgaatgattttgaataccacaagac 18958861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 19717887 - 19718015
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| || |||||||||||| || ||||||| || || ||||||||||||||||||| ||||||  |||||||||||||| ||||||    
T  19717887 aagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaattcttcga 19717986  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  19717987 aatttgaatgattttgaataccacaagac 19718015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 39467477 - 39467602
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| |||| |||||||| |||||| || ||||||| || || ||||||||| |||||||||||||||   ||||||||||||||||||||||||    
T  39467477 aaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcgaaat 39467576  T
Q  192 ttgaataattttgaataccactagac 217  Q
    |||||| |||||||||||||| ||||    
T  39467577 ttgaatgattttgaataccacaagac 39467602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 210
Target Start/End: Original strand, 4950021 - 4950143
Alignment:
Q  88 taagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 187  Q
    |||||||||| ||||||  |||||| | ||||||||||||||||| || |||||||| ||||||| ||||||||||||| |||||||||| |||| || |    
T  4950021 taagaaatcttatgtttgcatgaaatattttttcatgctaaaatttcactagaaaattccacaaattccatcaaaatctaatttattaaataatcttttg 4950120  T
Q  188 aaatttgaataattttgaatacc 210  Q
    ||| |||||| ||||||||||||    
T  4950121 aaacttgaatgattttgaatacc 4950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 32711358 - 32711449
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  32711358 caaaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 32711449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 39189815 - 39189940
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| ||||||||||||||||| |||||||| |||||| || |||||||  | |||||||| |  |||||||||||||| ||  ||||||||||||||    
T  39189815 caatcccaagaaatctcatgttttcatgaaagattttttcttgttaaaattt-actagaaaattcatcaaaatccatcaaattca-atttattaaacaat 39189912  T
Q  182 ccttcgaaatttgaataattttgaatac 209  Q
    |||||||||||||||| || ||||||||    
T  39189913 ccttcgaaatttgaatgatgttgaatac 39189940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 16362337 - 16362268
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  16362337 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacgagac 16362268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 18305977 - 18306095
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||          ||||||||||||||| |||||    
T  18305977 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatctttcga 18306066  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  18306067 aatttgaatgattttgaataccacaagac 18306095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 13478258 - 13478376
Alignment:
Q  92 aaatctcatgttttt-atgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaa 190  Q
    |||||| |||||||| || ||||||||| |||||||||||||    || ||||||| |||||||||| | |||||| |||||||||||||||||||||||    
T  13478258 aaatcttatgtttttcataaaagactttatcatgctaaaatttagctaaaaaatcctacaaaatccaacgaaatctaatttattaaacaatccttcgaaa 13478357  T
Q  191 tttgaataattttgaatac 209  Q
    ||| ||  |||||||||||    
T  13478358 tttaaaagattttgaatac 13478376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 7466525 - 7466407
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||          |||||||||||||| |||| |    
T  7466525 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaattcttcaa 7466436  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  7466435 aatttgaatgattttgaataccacaagac 7466407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 24214817 - 24214894
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||| |||||||    
T  24214817 aaattgaaaagagtcttgattgaataccacaagacttttttatgataaaaaagtcttttaaaatcctttagaatcatg 24214894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 32497715 - 32497597
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||||||| || || ||||||| || || ||||||||||||||||||          ||||||||||||||| |||||    
T  32497715 aagaaatctcatcttttcatgaaagactttctcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcattcga 32497626  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  32497625 aatttgaatgattttgaataccacaagac 32497597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 7507132 - 7507202
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  7507132 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 7507202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 8410421 - 8410526
Alignment:
Q  108 tgaaagactttttcatgctaaaattccattagaaaa--tcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttga 205  Q
    ||||||||||| |||| |||||||| || || ||||  ||||||||||||||||||| ||  ||||| ||||||||||||| |||||| ||| |||||||    
T  8410421 tgaaagactttgtcatactaaaatttcactaaaaaaaatcccacaaaatccatcaaagtccaatttagtaaacaatccttccaaatttcaatgattttga 8410520  T
Q  206 atacca 211  Q
    ||||||    
T  8410521 atacca 8410526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 23115401 - 23115471
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  23115401 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 23115471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 26373778 - 26373708
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  26373778 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 26373708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 41479070 - 41479000
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  41479070 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 41479000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 42735510 - 42735580
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  42735510 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 42735580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 42938343 - 42938416
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaat 341  Q
    ||||| ||||||||||||||||||||| ||| |||||||| ||| | |||||||||||||||||||||||||||    
T  42938343 aaattgaaaagagtcttgattgaataccacaagactttttcatggtaaaaaagtcttttaaaatcccttaaaat 42938416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 42305850 - 42305914
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccac 212  Q
    ||||||||||| ||||||  ||| |||||||||||||||||||||||||| ||||||||||||||    
T  42305850 acaaaatccattaaaatccaattgattaaacaatccttcgaaatttgaattattttgaataccac 42305914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 43959631 - 43959560
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| |||||  ||||||||||||||||||| |||||||||||    
T  43959631 aaagagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatcctttaaaatcatg 43959560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 4031334 - 4031392
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  4031334 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 4031392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 26374661 - 26374731
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||  ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  26374661 aaagagtcttgattgaatatcacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 26374731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 31623825 - 31623767
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  31623825 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 31623767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 42937325 - 42937263
Alignment:
Q  284 ttgattgaatacaacatgacttttttatgataaaaa-gtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||| ||| |||||||| |||||||||| ||||||||||||||||||||||||||    
T  42937325 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttaaaatcatg 42937263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 37857260 - 37857191
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||||  ||||||||||||||||||  |||||||||| | |||||||||||| ||||    
T  37857260 acaaaatccatcaaaatccaatttattaaacaatcctttaaaatttgaatgaatttgaataccacaagac 37857191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 9770439 - 9770503
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcc 146  Q
    |||||||||||||||||||||||| |||||| | ||||| ||| ||||||| |||||||||||||    
T  9770439 caatcctaagaaatctcatgttttgatgaaatatttttttatgttaaaatttcattagaaaatcc 9770503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 2705052 - 2705122
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||| ||||||||||||| ||| |||||||    
T  2705052 aaagagtcttgattgaataccacaagactttttcatgataaaaaaatcttttaaaatcctttacaatcatg 2705122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 32711508 - 32711585
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| |||  ||||||| ||||| ||||||||||||||| || |||| |||||||    
T  32711508 aaattgaaaagagtcttgattgaataccacaaaactttttcatgataaaaaagtcttttaaagtctcttagaatcatg 32711585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 32497452 - 32497397
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| |||| |||||||||||||||||||||    
T  32497452 agtcttgattgaataccacaagactttttcatgattaaaaagtcttttaaaatccc 32497397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 8543487 - 8543422
Alignment:
Q  282 tcttgattgaatacaacatgacttttttatgata--aaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||| |||  ||||||||||||||  |||| ||||||||||||||||| |||||||    
T  8543487 tcttgattgaataccacaaaacttttttatgataaaaaaaatcttttaaaatcccttagaatcatg 8543422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 344
Target Start/End: Original strand, 5576854 - 5576923
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatcccttaaaatcat 344  Q
    |||||||||||||||||||| ||| |||| ||| ||||  ||||| ||||||||||||||||| ||||||    
T  5576854 aaagagtcttgattgaataccacaagactatttcatgacaaaaaaatcttttaaaatcccttagaatcat 5576923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 14782372 - 14782427
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||||    
T  14782372 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 14782427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 44726047 - 44726102
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||||    
T  44726047 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 44726102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 32711305 - 32711343
Alignment:
Q  94 atctcatgtttttatgaaagactttttcatgctaaaatt 132  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  32711305 atctcttgttttcatgaaagactttttcatgctaaaatt 32711343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 18958964 - 18959017
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  18958964 agtcttgattgaatactacaagactttttcataattaaaaagtcttttaaaatc 18959017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 39467704 - 39467757
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  39467704 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 39467757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 7e-71; HSPs: 97)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 82 - 337
Target Start/End: Original strand, 39219376 - 39219630
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  39219376 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 39219475  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagacnnnnnnnnaaattaaaaagag 281  Q
     | || |||||||||| ||||||||||||| |||||       ||||||||||||||| |||||||||||| |||||||        |||||  ||||||    
T  39219476 -catcaaaatttgaatgattttgaataccaatagactttttttaagtgattaagagtcttgattgaataac-acaagacttttttttaaattggaaagag 39219573  T
Q  282 tcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccctta 337  Q
    |||||||||||||| ||| |||||||| ||||| ||||||||||||||||| |||||    
T  39219574 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctta 39219630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 83 - 260
Target Start/End: Original strand, 43581090 - 43581266
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  43581090 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 43581189  T
Q  183 cttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagac 260  Q
    ||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||| ||||||||||    
T  43581190 cttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaat-acaacaagac 43581266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 7718361 - 7718529
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  7718361 caatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7718460  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  7718461 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 7718529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 7719259 - 7719427
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  7719259 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7719358  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | |||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||||    
T  7719359 cattcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaata 7719427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 18914734 - 18914902
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||     
T  18914734 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaaa 18914833  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||| ||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  18914834 cctttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 18914902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 30441004 - 30440836
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  30441004 caatcctaagaaatctcatgttttcacgaaagactttttcatactaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 30440905  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  30440904 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 30440836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 34695481 - 34695313
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  34695481 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 34695382  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||||||||||||  |||||||||||||| |||       ||||||||||||||| ||||||||||    
T  34695381 ccttcgaaatttgaatggttttgaataccactggactttttttaagtgattaagagtcttgattgaata 34695313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 40996648 - 40996816
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||    
T  40996648 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatctgatttattaaacaat 40996747  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||| ||||||||||| ||||||||||    
T  40996748 ccttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaata 40996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 973392 - 973224
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  973392 caatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 973293  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||| |        ||||||||||||||| ||||||||||    
T  973292 ccttcgaaatttgaatgattttgaataccactaaattttttttaagtgattaagagtcttgattgaata 973224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 44343395 - 44343563
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  44343395 caatcctaagaaatctcatgttttcgtgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44343494  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| ||||| |||||||||| ||       ||||||||||||||| ||||||||||    
T  44343495 ccttcgaaatttgaatgattttaaataccactaaactttttttaagtgattaagagtcttgattgaata 44343563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 47914474 - 47914306
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||    
T  47914474 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 47914375  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||| ||||||||       ||||||||||||||| ||||||||||    
T  47914374 ccttcgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaata 47914306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 12893616 - 12893448
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||    
T  12893616 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaat 12893517  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
     ||||||||||||||| ||||||||||||| |||||       ||||||||||||||| ||||| ||||    
T  12893516 tcttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattaaata 12893448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 47879376 - 47879208
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||    
T  47879376 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaat 47879277  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||  |||||||||| |||||||||| ||||||||       ||||||||||||||| ||||||||||    
T  47879276 ccttttaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaata 47879208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 32142916 - 32143046
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  32142916 caatcttaagaaatctcatgtttttatggaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 32143015  T
Q  182 ccttcgaaatttgaataattttgaataccac 212  Q
    ||||| |||||||||| ||||||||||||||    
T  32143016 ccttcaaaatttgaatgattttgaataccac 32143046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 82 - 215
Target Start/End: Complemental strand, 34009221 - 34009088
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  34009221 caatcctaagaaatctcatgttttcttgaaagacttttttatgctaaaattttattagaaaattccacaaaatccatcaaaatctgatttattaaacaat 34009122  T
Q  182 ccttcgaaatttgaataattttgaataccactag 215  Q
    |||||||||||||||| |||||||||||||||||    
T  34009121 ccttcgaaatttgaatgattttgaataccactag 34009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 20275262 - 20275430
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||||||| ||| |||| ||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  20275262 caatgctaagaaatctcatgctttcatgacagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaat 20275361  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||  ||||       ||||||||||||||| ||||||||||    
T  20275362 ccttcgaaatttgaatgattttgaataccataagactttttttaagtgattaagagtcttgattgaata 20275430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 10068668 - 10068533
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||| | ||||||||||||||    
T  10068668 caatcctaacaaatctcatgtttttatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttattaaacaat 10068569  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||| |||||||||| |||||||||||||| ||||    
T  10068568 ccttcaaaatttgaatgattttgaataccacaagac 10068533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 7113660 - 7113529
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||    ||||||||||||||||||| |||||||||||||||||||||||||    
T  7113660 caatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaattttcctagaaaatcccacaaaatctatcaaaatctgatttattaaacaat 7113561  T
Q  182 ccttcgaaatttgaataattttgaataccact 213  Q
    ||| |||||||||||| |||||||||||||||    
T  7113560 cctgcgaaatttgaattattttgaataccact 7113529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 43679592 - 43679491
Alignment:
Q  112 agactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaatacca 211  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43679592 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 43679493  T
Q  212 ct 213  Q
    ||    
T  43679492 ct 43679491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 23101492 - 23101364
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  23101492 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 23101393  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  23101392 aatttgaatgattttgaataccacaagac 23101364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 28342541 - 28342413
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  28342541 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 28342442  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  28342441 aatttgaatgattttgaataccacaagac 28342413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 3023120 - 3022992
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  3023120 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 3023021  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  3023020 aatttgaatgattttgaataccacaagac 3022992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 28034811 - 28034939
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||  || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  28034811 aagaaatctcatcttttcatgaaagacttttttttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 28034910  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    |||||||||||||||||||||||| ||||    
T  28034911 aatttgaataattttgaataccacaagac 28034939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 29614770 - 29614898
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29614770 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29614869  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||| ||| ||||    
T  29614870 aatttgaatgattttgaatatcacaagac 29614898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 39784293 - 39784165
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  39784293 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 39784194  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||| ||| |||||||||||||| ||||    
T  39784193 aatttaaatgattttgaataccacaagac 39784165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 9882243 - 9882370
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| |  ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  9882243 aagaaatctcat-tttttatgaaagactttttcttcttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 9882341  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  9882342 aatttgaatgattttgaataccacaagac 9882370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 18838583 - 18838455
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  18838583 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatctttcga 18838484  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  18838483 aatttgaatgattttgaataccacaagac 18838455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 12740573 - 12740439
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||||| ||||||||||||||||| || || ||||||| || || |||||||||||||||| |||||||||  ||||||||||||||    
T  12740573 caatcttaagaaatctcatctttttatgaaagactttctcttgttaaaattacactataaaatcccacaaaatctatcaaaatc-catttattaaacaat 12740475  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    |||| ||||||||||| |||||||||||||| ||||    
T  12740474 cctttgaaatttgaatgattttgaataccacgagac 12740439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 12963874 - 12963767
Alignment:
Q  110 aaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaatac 209  Q
    |||||||||||| | |||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||    
T  12963874 aaagactttttcttactaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattttggatac 12963775  T
Q  210 cactagac 217  Q
    ||| ||||    
T  12963774 cacgagac 12963767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 33382828 - 33382709
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| |||| || |||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  33382828 aaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 33382729  T
Q  192 ttgaataattttgaatacca 211  Q
    || ||| |||||||||||||    
T  33382728 ttaaatgattttgaatacca 33382709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 7993336 - 7993214
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || |||| ||||||||||||||| || ||||||| || || ||||||||||| |||||||||||||   |||||||||||||||||||||    
T  7993336 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacacaatccatcaaaattcaatttattaaacaatccttcga 7993237  T
Q  189 aatttgaataattttgaatacca 211  Q
    ||||||||| |||||||||||||    
T  7993236 aatttgaatgattttgaatacca 7993214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 82 - 211
Target Start/End: Original strand, 43187356 - 43187485
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| || ||||||||||| || ||||||||||||||| || ||||||| || |||||||||| ||||||| ||||||||||  ||||||||||||||    
T  43187356 caatcccaaaaaatctcatgtcttcatgaaagactttttcttgttaaaatttcactagaaaatccgacaaaattcatcaaaatccaatttattaaacaat 43187455  T
Q  182 ccttcgaaatttgaataattttgaatacca 211  Q
     |||| |||||||||| |||||||||||||    
T  43187456 gcttcaaaatttgaatgattttgaatacca 43187485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 8675527 - 8675399
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| || ||||| |||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  8675527 aagaaatctcatcttttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 8675428  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    | ||| ||| |||||||||||||| ||||    
T  8675427 agtttaaatgattttgaataccacaagac 8675399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 25805862 - 25805763
Alignment:
Q  113 gactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccac 212  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| |||   ||||||||||||||||| |||||||||||| ||||||||||||||    
T  25805862 gactttttcatgctaaaattttattagaaaatcccacaaaatccatcataattcaatttattaaacaatcctacgaaatttgaatgattttgaataccac 25805763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 31639015 - 31638915
Alignment:
Q  150 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaat 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       ||||||||||||||| |||| ||||    
T  31639015 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgatagaat 31638916  T
Q  250 a 250  Q
    |    
T  31638915 a 31638915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 37972873 - 37972982
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||| |||||| |||| ||||||||||||||| || ||||||| || || |||||||| |||||||||||||||||  |||||||||| ||||||||||    
T  37972873 aagaagtctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccgcaaaatccatcaaaatccaatttattaaataatccttcga 37972972  T
Q  189 aatttgaata 198  Q
    ||||||||||    
T  37972973 aatttgaata 37972982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 9180071 - 9179913
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| | || |||||||||||||||||||||          ||||||||||||||    
T  9180071 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaaattcactagaaaatcccacaaaatcca----------atttattaaacaat 9179982  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||| ||||| | | |||||| ||||||| ||||       ||||||| ||||||| ||||||||||    
T  9179981 ccttcggaatttaagtgattttgtataccacaagactttttttaagtgatgaagagtcttgattgaata 9179913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 41827498 - 41827389
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||| ||||| || ||||||| || || | ||||||||||||||||||||||||  ||||||||||||||||||| |    
T  41827498 aagaaatctcatattttcatgaaagacattttcttgttaaaattacactacacaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 41827399  T
Q  189 aatttgaata 198  Q
    | ||||||||    
T  41827398 attttgaata 41827389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 101 - 216
Target Start/End: Complemental strand, 727692 - 727587
Alignment:
Q  101 gtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataat 200  Q
    ||||| |||||||||||||||||||||||||| || |||||||||||||||||||          |||||||||||||||||||| ||||||||||| ||    
T  727692 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatc----------tgatttattaaacaatcctttgaaatttgaatgat 727603  T
Q  201 tttgaataccactaga 216  Q
    ||||||||| ||||||    
T  727602 tttgaatactactaga 727587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 44256775 - 44256895
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| |||| |||||| |||||||| || ||||||| || |  ||||||| ||||||| |||| |||||  ||||||||||||||| ||||||||    
T  44256775 aaatctcatattttgatgaaaaactttttcttgttaaaattacactgcaaaatccaacaaaattcatccaaatccaatttattaaacaatcattcgaaat 44256874  T
Q  192 ttgaataattttgaataccac 212  Q
    |||||| ||||||||||||||    
T  44256875 ttgaatgattttgaataccac 44256895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 342
Target Start/End: Complemental strand, 509840 - 509598
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || |||||| |||          | ||||||||||||||||||  ||||||||||||||| |||||    
T  509840 aagaaatctcatcttttcatgaaagactttttcttgttaaaatccca----------ctacaaaatccatcaaaatccaatttattaaacaatcgttcga 509751  T
Q  189 aatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagacnnnnnnnnaaattaaaaagagtcttgat 288  Q
    ||||||||| |||||||||||||| ||||       || |||| || |||| ||||||||| ||  ||||||        |||| | ||| |||||||||    
T  509750 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaat-acctcaagac-ttttttaaaatgacaaatagtcttgat 509653  T
Q  289 tgaatacaacatgacttttttatga-taaaaagtcttttaaaatcccttaaaatc 342  Q
    ||||||| ||| |||||||| || | ||||||||||||||||||||| |||||||    
T  509652 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatc 509598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 32883948 - 32883848
Alignment:
Q  117 ttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactaga 216  Q
    ||||| || ||||||| || || |||||||||| |||||||||||||||  ||||| ||||||||| |||||||||||||| |||||||||||||| |||    
T  32883948 ttttcttgttaaaattacactacaaaatcccacgaaatccatcaaaatccaatttaataaacaatcattcgaaatttgaatgattttgaataccacaaga 32883849  T
Q  217 c 217  Q
    |    
T  32883848 c 32883848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 44121965 - 44122029
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccac 212  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  44121965 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 44122029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 3797066 - 3797191
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||| |||||||  | ||||||||||||||||||||||| || |||||||||         |||||||||||| ||||||||||||||    
T  3797066 caatcctaagaaatct-atgttttcttaaaagactttttcatgctaaaatttcactagaaaatc---------ccatcaaaatctaatttattaaacaat 3797155  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||| |||||| ||| || ||||||||||| ||||    
T  3797156 ccttcaaaattttaatgatcttgaataccacaagac 3797191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 19251672 - 19251605
Alignment:
Q  150 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  19251672 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacgagac 19251605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 8078369 - 8078299
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgata-aaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| |||||||    
T  8078369 aaagagtcttgattgaataccacaagacttttttatgataaaaaagtcttttaaaatcccttagaatcatg 8078299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 138 - 337
Target Start/End: Original strand, 10676475 - 10676673
Alignment:
Q  138 agaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagag 237  Q
    ||||||| ||| |||||||||| |||||  |||||||||||||||||||||||||||||| ||||||||||| |  ||||       ||||||| || ||    
T  10676475 agaaaattccataaaatccatccaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatacaatgagactttttttaagtgatgaaaag 10676574  T
Q  238 tcatgattgaataacaacaagacnnnnnnnnaaattaaaaagagtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccctt 336  Q
    || ||||||||| || |||||||        |||||  |||||||||||||| ||||| ||| || ||||| || | |||||||||||||||||||||||    
T  10676575 tcttgattgaat-accacaagac-cttttttaaattgcaaagagtcttgattaaataccacaagattttttcataattaaaaagtcttttaaaatccctt 10676672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 31638856 - 31638779
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||| |||| |||||||    
T  31638856 aaattgaaaagagtcttgattgaataccacatgactttttcatgataaaaaagtcttttaaaatctcttagaatcatg 31638779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 40460772 - 40460841
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  40460772 acaaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatgattttgaataccacaagac 40460841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 19810983 - 19810874
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||| || |||||||| ||||||||||||          ||||||||||||||| || ||    
T  19810983 aagaaatctcatgttttcatgaaagacatttttatgctaaaatttcactagaaaattccacaaaatcca----------atttattaaacaatcatttga 19810894  T
Q  189 aatttgaataattttgaata 208  Q
    ||||||||| ||||||||||    
T  19810893 aatttgaatgattttgaata 19810874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 46405494 - 46405565
Alignment:
Q  146 ccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||||||  ||||||||||||||| || ||||||||||| |||||||||||||| ||||    
T  46405494 ccacaaaatccatcaaaatccaatttattaaacaatcatttgaaatttgaatgattttgaataccacaagac 46405565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 1470261 - 1470362
Alignment:
Q  110 aaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaatac 209  Q
    ||||| |||||||||||||||||  || |||||||||||||||| | |||||||||| ||| |||||||||| |||  |||||||||  |||||||||||    
T  1470261 aaagattttttcatgctaaaattttatcagaaaatcccacaaaa-ctatcaaaatctaattcattaaacaatgctttaaaatttgaacgattttgaatac 1470359  T
Q  210 cac 212  Q
    |||    
T  1470360 cac 1470362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 44343629 - 44343699
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  44343629 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 44343699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 37328062 - 37327993
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  37328062 acaaaatccatcaaaattcaatttattaaacaatcctttgaaatttgaatgattttgaataccacaagac 37327993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 29585698 - 29585586
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||| |||| |||||||||||||||||||| || ||||||| ||          | ||||||||||||||||||  | ||||||||||||||||| |    
T  29585698 aagaaatttcatctttttatgaaagactttttcttgttaaaattaca----------ctacaaaatccatcaaaatccaaattattaaacaatccttcaa 29585609  T
Q  189 aatttgaataattttgaatacca 211  Q
    ||||||||| |||||||||||||    
T  29585608 aatttgaatgattttgaatacca 29585586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 32143145 - 32143223
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||| |||||||||||||||||||  ||| |||||||| |||||  ||||||||||||||||||||||| |||||||    
T  32143145 aaattagaaagagtcttgattgaatatcacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatg 32143223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 10617102 - 10617024
Alignment:
Q  99 atgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaa 177  Q
    ||||||||||||||||||| ||  | |||||||  || ||||||||| |||||||||||||||||||| ||||||||||    
T  10617102 atgtttttatgaaagacttgttattactaaaatatcactagaaaatctcacaaaatccatcaaaatctaatttattaaa 10617024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 18914968 - 18915030
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccctta 337  Q
    |||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||    
T  18914968 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatccctta 18915030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 30440770 - 30440700
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| || ||||| ||||| ||||||||||||||||||||||| |||||||    
T  30440770 aaagagtcttgattgaataccacaagattttttcatgataaaaaagtcttttaaaatcccttagaatcatg 30440700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 34695205 - 34695135
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| || || ||||||||||||||||||||||| |||||||    
T  34695205 aaagagtcttgattgaataccacaagactttttcataataaaaaagtcttttaaaatcccttagaatcatg 34695135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 47066828 - 47066770
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  47066828 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 47066770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 17001099 - 17001152
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccac 212  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  17001099 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 17001152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 47879149 - 47879072
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgataaa-aagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| |||||||| |||||||||||| ||| |||||||| || ||||| |||||||||||||||||||| |||||||    
T  47879149 aaattgaaaagagtattgattgaataccacaagactttttcattataaataagtcttttaaaatcccttagaatcatg 47879072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 47914247 - 47914170
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgataaa-aagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| |||||||| |||||||||||| ||| |||||||| || ||||| |||||||||||||||||||| |||||||    
T  47914247 aaattgaaaagagtattgattgaataccacaagactttttcattataaataagtcttttaaaatcccttagaatcatg 47914170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 973158 - 973087
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| |||||  ||||| ||||||||||||||||| |||||||    
T  973158 aaagagtcttgattgaataccacaagactttttcatgataaaaaaaatcttttaaaatcccttagaatcatg 973087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 43679444 - 43679373
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| |||||  ||||| ||||||||||||||||| |||||||    
T  43679444 aaagagtcttgattgaataccacaagactttttcatgataaaaaaaatcttttaaaatcccttagaatcatg 43679373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 20275496 - 20275566
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgataaaa-agtcttttaaaatcccttaaaatcatg 345  Q
    ||||| |||||||||||||| ||| ||||| || ||||||||| ||||||||||||||||||| |||||||    
T  20275496 aaagaatcttgattgaataccacaagacttattcatgataaaaaagtcttttaaaatcccttagaatcatg 20275566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 43581323 - 43581393
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||| | ||| |||||||    
T  43581323 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattctttagaatcatg 43581393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 727493 - 727416
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| |||||||||||||||||||||  || |||||||| ||||| |||||||| |||||||||| ||| |||||||    
T  727493 aaattgaaaagagtcttgattgaataccgcaagactttttcatgataaaaaagtcatttaaaatccattagaatcatg 727416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 33892315 - 33892384
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||| ||| ||||||  ||||||| ||||||| |||||||||||||| |||||||||||||| ||||    
T  33892315 acaaaattcataaaaatccaatttatttaacaatcattcgaaatttgaatgattttgaataccacaagac 33892384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 39028232 - 39028163
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||||  ||||||||||||||| |||| ||||||||  |||||||||| ||| ||||    
T  39028232 acaaaatccatcaaaatccaatttattaaacaatctttcgtaatttgaacgattttgaataacacaagac 39028163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 447913 - 447854
Alignment:
Q  153 atccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccac 212  Q
    |||||||||||||  ||| ||||||||||| |||||||||||||| ||||| ||||||||    
T  447913 atccatcaaaatccaattaattaaacaatcattcgaaatttgaatgattttaaataccac 447854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 34008993 - 34008919
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgataaaaag-tcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| |   |||||||| ||||||||||  ||||||||||||||||| |||||||    
T  34008993 aaattgaaaagagtcttgattgaatacca---gactttttcatgataaaaaaatcttttaaaatcccttagaatcatg 34008919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 39784062 - 39784007
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| |||||||||||| || | |||||||||||||||||||||    
T  39784062 agtcttgattgaataccacatgactttttcataattaaaaagtcttttaaaatccc 39784007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 12893382 - 12893312
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatg-ataaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||| | ||||| ||||||||||| ||||| |||||||    
T  12893382 aaagagtcttgattgaataccacaagactttttcatgaaaaaaaaatcttttaaaataccttagaatcatg 12893312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 44623295 - 44623357
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaat 154  Q
    |||| |||| ||||||||| |||||||||||| |||||||| || |||||||| |||||||||    
T  44623295 aaatatcatatttttatgagagactttttcattctaaaatttcactagaaaattccacaaaat 44623357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 29893090 - 29893033
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  29893090 aaagagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 29893033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 43187569 - 43187638
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccctta 337  Q
    |||||| |||||||||||||||||||| ||| |||| ||| || | ||||||||||||||||||| ||||    
T  43187569 aaattacaaagagtcttgattgaataccacaagactctttcataattaaaaagtcttttaaaatctctta 43187638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 335
Target Start/End: Complemental strand, 3634292 - 3634236
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccct 335  Q
    |||||||||||||||  ||| ||||||||||| || |||||||||||||||||||||    
T  3634292 agtcttgattgaatatcacaagacttttttataataaaaaagtcttttaaaatccct 3634236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 7113430 - 7113360
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgataaaaa--gtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| | || ||||| | ||||||||||  |||||||||||||||||| |||||||    
T  7113430 aaagagtcttgattgaataccaaat-actttgtcatgataaaaaaagtcttttaaaatcccttagaatcatg 7113360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 40996882 - 40996953
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||| ||| |||||  ||||| | ||||||||||||||| |||||||    
T  40996882 aaagagtcttgattgaataccacaagactctttcatgataaaaaaaatattttaaaatcccttagaatcatg 40996953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 41827275 - 41827215
Alignment:
Q  282 tcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaat 341  Q
    |||||||||||||| ||| |||||||| || || |||||||||||||||||||| ||||||    
T  41827275 tcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaat 41827215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 46405668 - 46405720
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaat 331  Q
    |||||||||||||||| |||||||||||| || | ||||||||||||||||||    
T  46405668 agtcttgattgaataccacatgactttttcataattaaaaagtcttttaaaat 46405720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 9599072 - 9599134
Alignment:
Q  282 tcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||| ||| ||||||||||| ||  ||||||| |||||||||| |||||||||    
T  9599072 tcttgattgaatactacaagacttttttataattaaaaaagttttttaaaatctcttaaaatc 9599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 9826643 - 9826705
Alignment:
Q  282 tcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||| ||| ||||||||||| ||  ||||||| |||||||||| |||||||||    
T  9826643 tcttgattgaatactacaagacttttttataattaaaaaagttttttaaaatctcttaaaatc 9826705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 19251506 - 19251439
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||||||| ||| ||||||||  | | ||||||||||||||||||| |||| ||||    
T  19251506 aaagagtcttgattgaatactacaagactttttcgtaattaaaaagtcttttaaaatctcttagaatc 19251439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 37327890 - 37327835
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  37327890 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 37327835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 48117830 - 48117885
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||||    
T  48117830 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 48117885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 7993105 - 7993051
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatcc 333  Q
    |||||||||||||||| ||| |||||||| || | ||||||||||||||||||||    
T  7993105 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcc 7993051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 23101259 - 23101206
Alignment:
Q  282 tcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  23101259 tcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 23101206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 28342308 - 28342255
Alignment:
Q  282 tcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  28342308 tcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 28342255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 29615001 - 29615054
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  29615001 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 29615054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 34115478 - 34115531
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||| ||| || |||||||| | |||||||||||||||||||    
T  34115478 agtcttgattgaatactacaagatttttttatcattaaaaagtcttttaaaatc 34115531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 39028060 - 39028008
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaat 331  Q
    |||||||||||||||| ||| |||||||| || | ||||||||||||||||||    
T  39028060 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 39028008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 43581240 - 43581272
Alignment:
Q  277 aagagtcttgattgaatacaacatgactttttt 309  Q
    ||||||||||||||||||||||| |||||||||    
T  43581240 aagagtcttgattgaatacaacaagactttttt 43581272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 47879225 - 47879193
Alignment:
Q  277 aagagtcttgattgaatacaacatgactttttt 309  Q
    ||||||||||||||||||| |||||||||||||    
T  47879225 aagagtcttgattgaataccacatgactttttt 47879193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 47914323 - 47914291
Alignment:
Q  277 aagagtcttgattgaatacaacatgactttttt 309  Q
    ||||||||||||||||||| |||||||||||||    
T  47914323 aagagtcttgattgaataccacatgactttttt 47914291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 4e-66; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 6197477 - 6197645
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  6197477 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 6197576  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  6197577 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 6197645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 1391830 - 1391662
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  1391830 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 1391731  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||| |||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  1391730 ccttccaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 1391662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 83 - 250
Target Start/End: Original strand, 2300738 - 2300905
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||    
T  2300738 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 2300837  T
Q  183 cttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||||||||||| ||||| ||||||| |||||       ||||||| ||||||| ||||||||||    
T  2300838 cttcgaaatttgaatgattttcaataccagtagactttttttaagtgatcaagagtcttgattgaata 2300905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 29076805 - 29076670
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||||||| | ||||||||||||||||||||||||||||||||    
T  29076805 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29076706  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||||||||||| ||||||||||| |||||||    
T  29076705 ccttcgaaatttgaatgattttgaatactactagac 29076670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 29111779 - 29111644
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||||||| | ||||||||||||||||||||||||||||||||    
T  29111779 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29111680  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||||||||||| ||||||||||| |||||||    
T  29111679 ccttcgaaatttgaatgattttgaatactactagac 29111644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 28002871 - 28002703
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||   ||||||||| |||||||||||||||||||||||||| || ||||||||  |||||||||||||||||||||||||||||||||||    
T  28002871 caatcctaagaagcttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatttcacaaaatccatcaaaatctgatttattaaacaat 28002772  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||| |||||||||| |||||||||| ||||||||       ||||||||||||||| ||||||||||    
T  28002771 ccttccaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaata 28002703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 31895895 - 31895767
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  31895895 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactagaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 31895796  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  31895795 aatttgaatgattttgaataccacaagac 31895767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 82 - 208
Target Start/End: Complemental strand, 7052051 - 7051925
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||  | |||||||||| ||||||||||||||||||  ||||||||||||||    
T  7052051 caattctaagaaatctcatgattttatgaaaaactttttcatgctaaaattttactagaaaatcctacaaaatccatcaaaatccaatttattaaacaat 7051952  T
Q  182 ccttcgaaatttgaataattttgaata 208  Q
    |||||||||||||||| ||||||||||    
T  7051951 ccttcgaaatttgaatgattttgaata 7051925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 309
Target Start/End: Original strand, 34759056 - 34759275
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| |||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  34759056 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttgga 34759155  T
Q  189 aatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagacnnnnnnnnaaattaaaaagagtcttgat 288  Q
    ||||||||| |||||||||||||| ||||       ||||||| || |||| ||||||||| ||  ||||||        |||| | |||||||||||||    
T  34759156 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaat-acttcaagactttttttaaaatgacaaagagtcttgat 34759254  T
Q  289 tgaatacaacatgactttttt 309  Q
    ||||||| ||| |||||||||    
T  34759255 tgaataccacaagactttttt 34759275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 34773608 - 34773485
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || |  ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34773608 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactgcaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34773509  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| ||||||||||||||    
T  34773508 aatttgaatgattttgaataccac 34773485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 14262439 - 14262567
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||| ||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  14262439 aagaaatcccatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 14262538  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||| ||| |||||||||||||| ||||    
T  14262539 aatttaaatgattttgaataccacaagac 14262567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 7497274 - 7497147
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||| ||||||||||||||||||  |||||||||||| ||||||||    
T  7497274 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc-acaaaatccatcaaaatccaatttattaaacactccttcga 7497176  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  7497175 aatttgaatgattttgaataccacaagac 7497147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 31067682 - 31067569
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||          |||||||||||||||||||||    
T  31067682 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 31067593  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| ||||||||||||||    
T  31067592 aatttgaatgattttgaataccac 31067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 2300964 - 2301041
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  2300964 aaattgaaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 2301041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 30385075 - 30385191
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||||||| |  || ||||||| || || ||||||||||||||||||          |||||||||||||||||||||    
T  30385075 aagaaatctcatcttttcatgaaagactttgt--tgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 30385162  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  30385163 aatttgaatgattttgaataccacaagac 30385191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 6197711 - 6197781
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||| ||||||||||||||| |||||||    
T  6197711 aaagagtcttgattgaataccacacgactttttcatgataaaaaagttttttaaaatcccttagaatcatg 6197781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 4200492 - 4200541
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaat 197  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  4200492 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaat 4200541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 1391596 - 1391526
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| |||||||| |||||||||| ||| |||||||    
T  1391596 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcatttaaaatcctttagaatcatg 1391526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 29076570 - 29076499
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||  ||| |||||||| |||||  |||||||||||||||||| |||| |||||||    
T  29076570 aaagagtcttgattgaatatcacaagactttttcatgataaaaaaagtcttttaaaatctcttagaatcatg 29076499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 29111543 - 29111472
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||  ||| |||||||| |||||  |||||||||||||||||| |||| |||||||    
T  29111543 aaagagtcttgattgaatatcacaagactttttcatgataaaaaaagtcttttaaaatctcttagaatcatg 29111472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 7051817 - 7051750
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||||||  ||| |||||||| ||||| |||||||||||||||||| |||| ||||    
T  7051817 aaagagtcttgattgaatatcacaagactttttcatgataaaaaagtcttttaaaatctcttagaatc 7051750  T

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Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 2238717 - 2238668
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaat 131  Q
    ||||| |||||||||||||||||| |||||||| |||||||| |||||||    
T  2238717 caatcttaagaaatctcatgttttcatgaaagattttttcatactaaaat 2238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 5957205 - 5957148
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccctt 336  Q
    |||||||||||||||| ||  ||||||||||| || ||||||||||||||||||||||    
T  5957205 agtcttgattgaataccactagacttttttattataaaaaagtcttttaaaatccctt 5957148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 11113733 - 11113773
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcat 123  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  11113733 aatcctaagaaatctcatgttttcatgaaagacgttttcat 11113773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 31895664 - 31895609
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  31895664 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 31895609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 34773377 - 34773322
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  34773377 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 34773322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 657101 - 657003
Alignment:
Q  141 aaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtca 240  Q
    |||||||||||||||||||| |||| |||||||||||           ||||||||| |||| ||||||||||||||       |||||||||||||||     
T  657101 aaatcccacaaaatccatcagaatcagatttattaaa-----------aatttgaatgatttagaataccactagactttttttaagtgattaagagtct 657013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 31609697 - 31609751
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatcc 333  Q
    |||||||||||||||| ||| || |||||||| | ||||||||||||||||||||    
T  31609697 agtcttgattgaataccacaagatttttttataattaaaaagtcttttaaaatcc 31609751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 3848330 - 3848286
Alignment:
Q  168 atttattaaacaatccttcgaaatttgaataattttgaataccac 212  Q
    ||||||||||||||| ||| |||||| ||| ||||||||||||||    
T  3848330 atttattaaacaatcattcaaaatttaaatgattttgaataccac 3848286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 331
Target Start/End: Complemental strand, 28002637 - 28002581
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaat 331  Q
    |||||||||||||||||||| ||| || ||||| || || |||||||||||||||||    
T  28002637 aaagagtcttgattgaatacgacaagattttttcattataaaaaagtcttttaaaat 28002581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 4e-66; HSPs: 97)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 10139146 - 10139314
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  10139146 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 10139245  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  10139246 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 10139314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 20498415 - 20498247
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  20498415 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 20498316  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  20498315 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 20498247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 82 - 259
Target Start/End: Complemental strand, 54625798 - 54625622
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  54625798 caatcttaagaaatctcatgttttcatgaaaaactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 54625699  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaaga 259  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||| |||||||||    
T  54625698 ccttcgaaatttgaataattttgaataccactagactttttttaagtgattaagagtcttgattgaat-acaacaaga 54625622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 996086 - 996254
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  996086 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 996185  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       |||||||||||| || ||||||||||    
T  996186 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaata 996254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 3999645 - 3999813
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  3999645 caatcctaagaaatctcatgtttttatgaaagactttttcattctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 3999744  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||||    
T  3999745 ccttcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaata 3999813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 19254033 - 19253865
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||    
T  19254033 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 19253934  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  19253933 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 19253865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 33807798 - 33807967
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  33807798 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33807897  T
Q  182 ccttcgaaatttgaataattttgaataccactagac-nnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||        ||||||||||||||| ||||||||||    
T  33807898 ccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaata 33807967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 3206205 - 3206373
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  3206205 caatcataagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 3206304  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  3206305 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 3206373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 37820477 - 37820645
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  37820477 caatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactggaaaatcccacaaaatccatcaaaatctgatttattaaacaat 37820576  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       |||||||||||| || ||||||||||    
T  37820577 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaata 37820645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 6589770 - 6589602
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||    
T  6589770 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaataat 6589671  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
     ||||||||||||||| |||||||||||||||||||       || |||||||||||| ||||||||||    
T  6589670 tcttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaata 6589602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 29448858 - 29449026
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||    
T  29448858 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 29448957  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       |||||||| |||||| ||||||||||    
T  29448958 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattgagagtcttgattgaata 29449026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 44762037 - 44762205
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  44762037 caatcttaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44762136  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||||| |||||||||||| |||||||||||||       ||||||||||||||| ||||||||||    
T  44762137 ccttcgaaacttgaataattttaaataccactagactttttttaagtgattaagagtcttgattgaata 44762205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 88 - 250
Target Start/End: Original strand, 33996547 - 33996709
Alignment:
Q  88 taagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 187  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33996547 taagaaatctcatgtttttataaaagactttttcatgctaaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaatccttcg 33996646  T
Q  188 aaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||| ||||||||||||||| ||        ||||||||||||||| ||||||||||    
T  33996647 aaatttgaatgattttgaataccactggattttttttaagtgattaagagtcttgattgaata 33996709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 35337939 - 35337773
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  35337939 caatcctaa-aaatctcatgttttcatgaaa-actttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 35337842  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||||||||||||  ||||||||||||||||||       ||||||||||||||| ||||||||||    
T  35337841 ccttcgaaatttgaatttttttgaataccactagactttttttaagtgattaagagtcttgattgaata 35337773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 40247050 - 40246915
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  40247050 caatcataaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 40246951  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||| |||||||||| |||||||||||||||||||    
T  40246950 ccttccaaatttgaatgattttgaataccactagac 40246915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 6035053 - 6035188
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||| |||||||||||| |    
T  6035053 caatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctaatttattaaacatt 6035152  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
     ||||||||||||||| |||||||||| ||| ||||    
T  6035153 gcttcgaaatttgaatgattttgaatatcacgagac 6035188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 25418572 - 25418404
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||| ||||||||||||| |||||| |||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  25418572 caatcctaaggaatctcatgttttcatgaaatactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 25418473  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||  |||||||||| |||||||||||| |||||        |||||||||| |||| ||||||||||    
T  25418472 cctttcaaatttgaatgattttgaataccgctagattttttgtaagtgattaaaagtcttgattgaata 25418404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 53929128 - 53929296
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| |||||||||||||| || ||||| ||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||||||||||    
T  53929128 caatcctaaaaaatctcatgttttcattaaagattttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatcttatttattaaacaat 53929227  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | ||||| |||| ||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  53929228 cgttcgatatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 53929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 217
Target Start/End: Complemental strand, 52114734 - 52114600
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    ||||||||||||||||||||||| |  ||||| |||||||||||||||||  | |||||||| |||||||||| ||||||||||||||||||||||||||    
T  52114734 aatcctaagaaatctcatgttttcacaaaagattttttcatgctaaaattttactagaaaattccacaaaatctatcaaaatctgatttattaaacaatc 52114635  T
Q  183 cttcgaaatttgaataattttgaataccactagac 217  Q
    || |||||||||||| |||||||||||||||||||    
T  52114634 ctgcgaaatttgaattattttgaataccactagac 52114600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 18749811 - 18749683
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  18749811 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 18749712  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  18749711 aatttgaatgattttgaataccacaagac 18749683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 250
Target Start/End: Original strand, 51699495 - 51699647
Alignment:
Q  97 tcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaa 196  Q
    ||||||||| | |||||| ||||||||||||||||| || |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  51699495 tcatgttttcacgaaagattttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatcttatttattaaccaatccttcgaaatttgaa 51699594  T
Q  197 taattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | ||||||||||||||||||        ||||||||||||||| ||||||||||    
T  51699595 tgattttgaataccactaga-tttttttaagtgattaagagtcttgattgaata 51699647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 54629043 - 54628920
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  54629043 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 54628944  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| ||||||||||||||    
T  54628943 aatttgaatgattttgaataccac 54628920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 40897343 - 40897221
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  40897343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 40897244  T
Q  189 aatttgaataattttgaatacca 211  Q
    ||||||||| |||||||||||||    
T  40897243 aatttgaatgattttgaatacca 40897221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 82 - 211
Target Start/End: Complemental strand, 5825268 - 5825139
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||| |||| || || |||||||||||||||| |||||||||  ||||||||||||||    
T  5825268 caatcataagaaatctcatgttttcatgaaagcctttttcatgctagaatttcactaaaaaatcccacaaaatctatcaaaatccaatttattaaacaat 5825169  T
Q  182 ccttcgaaatttgaataattttgaatacca 211  Q
    ||||| |||||||||| |||||||||||||    
T  5825168 ccttcaaaatttgaatgattttgaatacca 5825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 26107460 - 26107332
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| || || |||||| |||||||||||||||||||  |||||||||||||||||||||    
T  26107460 aagaaatctcatctttttatgaaatactttttcttgttaaaattacactacaaaatcacacaaaatccatcaaaatccaatttattaaacaatccttcga 26107361  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  26107360 aatttgaatgattttgaataccacaagac 26107332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 32580375 - 32580247
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || |||||||| |||||||||||||||||  |||||||||||||||||||||    
T  32580375 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccctcaaaatccatcaaaatccaatttattaaacaatccttcga 32580276  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  32580275 aatttgaatgattttgaataccacaagac 32580247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 36674137 - 36674265
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  36674137 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 36674236  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  36674237 aatttgaatgattttgaataccacaagac 36674265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 34484037 - 34484160
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| |||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34484037 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34484136  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| ||||||||||||||    
T  34484137 aatttgaatgattttgaataccac 34484160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 90 - 250
Target Start/End: Complemental strand, 29030203 - 29030044
Alignment:
Q  90 agaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaa 189  Q
    |||||||||||||||| || ||| |    |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  29030203 agaaatctcatgttttcataaaaaaaaaattcatgttaaaatttcattagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttcaaa 29030104  T
Q  190 atttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||| |||||||||||||| ||||       ||||||||||||||| ||||||||||    
T  29030103 atttgaatgattttgaataccacaagac-ttttttaagtgattaagagtcttgattgaata 29030044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 309
Target Start/End: Original strand, 51737746 - 51737952
Alignment:
Q  102 tttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataatt 201  Q
    |||||||||||||||||||| || ||||||| ||  | ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||    
T  51737746 tttttatgaaagactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgatt 51737845  T
Q  202 ttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagacnnnnnnnnaaattaaaaagagtcttgattgaatacaacatg 301  Q
    ||||||||||| ||||       ||||||| || |||| ||||||||| ||  ||||||        |||| | |||||||||||||||||||| ||| |    
T  51737846 ttgaataccacaagactttttttaagtgatgaaaagtcttgattgaat-acctcaagactttttttaaaatgataaagagtcttgattgaataccacaag 51737944  T
Q  302 actttttt 309  Q
    ||||||||    
T  51737945 actttttt 51737952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 1440007 - 1440120
Alignment:
Q  137 tagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaaga 236  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||       ||||||||||||    
T  1440007 tagaaaatcccataaaatccatcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaaga 1440106  T
Q  237 gtcatgattgaata 250  Q
    ||| ||||||||||    
T  1440107 gtcttgattgaata 1440120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 6131233 - 6131321
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatt 170  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  6131233 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatt 6131321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 11431725 - 11431597
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || |||||||||||||||||| |||||||  |||||||||||||||||||||    
T  11431725 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcga 11431626  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||| ||| |||||||||||||| ||||    
T  11431625 aatttaaatgattttgaataccacaagac 11431597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 17946487 - 17946359
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  17946487 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 17946388  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||| ||| ||||    
T  17946387 aatttgaatgattttgaatatcacgagac 17946359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 44906520 - 44906648
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||| ||||| || ||||||| || || ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  44906520 aagaaatctcatcttttcatgaaagacattttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 44906619  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  44906620 aatttgaatgattttgaataccacaagac 44906648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 22057933 - 22057834
Alignment:
Q  117 ttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactaga 216  Q
    |||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  22057933 ttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccatcgaaatttgaatgattttaaataccactaga 22057834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 52617978 - 52618100
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||| ||      |||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  52617978 aagaaatctcatctttttatgaaagacttgtt------aaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 52618071  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  52618072 aatttgaatgattttgaataccacaagac 52618100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 27899540 - 27899415
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||||||| || |||||||||| ||||||||          ||||||||||||||||    
T  27899540 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatc----------tgatttattaaacaat 27899451  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||||||||||| |||||||||||||| ||||    
T  27899450 ccttcgaaatttgaatgattttgaataccaccagac 27899415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 31646293 - 31646414
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||||||  ||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||| ||||||||||| |||||    
T  31646293 aagaaatctcat--tttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattcattaaacaatctttcga 31646390  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| ||||||||||||||    
T  31646391 aatttgaatgattttgaataccac 31646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 48379356 - 48379228
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || |||| ||||||||| ||||| |  ||||||| || || |||||||||||||||||||||||||   |||||||||||||||||||||    
T  48379356 aagaaatctgatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatccttcga 48379257  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  48379256 aatttgaatgattttgaataccacaagac 48379228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 50903247 - 50903375
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| || ||||| |||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||      
T  50903247 aagaaatctcatattttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttctt 50903346  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  50903347 aatttgaatgattttgaataccacaagac 50903375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 193
Target Start/End: Original strand, 1439894 - 1440005
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| ||||||||||||||  |||||||||||||||| | ||||||  | ||||||||||||||||||| |||||||||| ||||||||||||||    
T  1439894 caatcctaaaaaatctcatgttttcgtgaaagactttttcataccaaaattttactagaaaatcccacaaaatctatcaaaatctaatttattaaacaat 1439993  T
Q  182 ccttcgaaattt 193  Q
    ||||| ||||||    
T  1439994 ccttccaaattt 1440005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 52810577 - 52810449
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| |||||| || ||||||| |  || |||||||||||||||||||||||||   ||||||||||||||| ||| |    
T  52810577 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacgctacaaaatcccacaaaatccatcaaaattcaatttattaaacaatcattcaa 52810478  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  52810477 aatttgaatgattttgaataccacaagac 52810449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 216
Target Start/End: Complemental strand, 52080117 - 52079999
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |      ||||||||||||||||||| ||||||||||||||||||||||          ||||||||||||||||    
T  52080117 caatcctaagaaatctcatgttttca------actttttcatgctaaaatttcattagaaaatcccacaaaatc----------tgatttattaaacaat 52080034  T
Q  182 ccttcgaaatttgaataattttgaataccactaga 216  Q
    ||||| |||||||||| ||||||||||||||||||    
T  52080033 ccttcaaaatttgaatgattttgaataccactaga 52079999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 55235359 - 55235264
Alignment:
Q  114 actttttcatgctaaaattccattagaaaatcccacaaaa-tccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaata 208  Q
    ||||||| ||||||||||| |||||||||||||||||||| |||||||||| |  ||||||||||||||| |||||||||||||| ||||||||||    
T  55235359 acttttttatgctaaaatttcattagaaaatcccacaaaaatccatcaaaaaccaatttattaaacaatctttcgaaatttgaatgattttgaata 55235264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 93 - 217
Target Start/End: Complemental strand, 20833187 - 20833063
Alignment:
Q  93 aatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatt 192  Q
    ||||| || |||| |||||| |||||||| || ||||||| || ||  ||||| |||||||||||||||||||  |||||||||||||||||||  ||||    
T  20833187 aatcttatcttttcatgaaatactttttcttgttaaaattacactaataaatctcacaaaatccatcaaaatccaatttattaaacaatccttccgaatt 20833088  T
Q  193 tgaataattttgaataccactagac 217  Q
    ||||| |||||||||||||| ||||    
T  20833087 tgaatgattttgaataccacaagac 20833063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 20498181 - 20498112
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgataaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  20498181 aaagagtcttgattgaataccacaagactttttcatgataaaaagtcttttaaaatcccttagaatcatg 20498112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 10660675 - 10660611
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccac 212  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  10660675 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 10660611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 39842494 - 39842619
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| |||||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||||| ||||||||| ||||||||||||||    
T  39842494 caatcccaagaaatctcatcttttcatgaaagactttttcttgttaaaattacatta----------caaaatccgtcaaaatctaatttattaaacaat 39842583  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
     ||||||||||||||| |||||||||| ||| ||||    
T  39842584 tcttcgaaatttgaatgattttgaatatcacgagac 39842619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 148 - 331
Target Start/End: Original strand, 10728707 - 10728889
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattga 247  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||| ||||| |||||||| ||||       ||||||| || |||| |||||||    
T  10728707 acaaaatccatcaaaatccaatttattaaacaatccttccaaatttgaatgattttaaataccacaagactttttgtaagtgatgaaaagtcttgattga 10728806  T
Q  248 ataacaacaagacnnnnnnnnaaattaaaaagagtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaat 331  Q
    || ||  ||||||        |||| | |||||||||||||||||||| ||| |||||||| || | ||||||||||||||||||    
T  10728807 at-acctcaagac-ttttttaaaatgacaaagagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 10728889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 3206423 - 3206500
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  3206423 aaattgaaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 3206500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 39038229 - 39038111
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||||||||||||  |||||||||||||| ||||||    
T  39038229 aagaaatctcatctttttatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaattcttcga 39038140  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||| ||||||| ||||    
T  39038139 aatttgaatgattttggataccacaagac 39038111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 996319 - 996389
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  996319 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 996389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 19253799 - 19253729
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  19253799 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 19253729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 33807680 - 33807730
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatt 132  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33807680 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatt 33807730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 37455050 - 37454932
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| || || ||||||||||||||| ||          ||||||||||||||| |||||    
T  37455050 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaattca----------atttattaaacaatcattcga 37454961  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  37454960 aatttgaatgattttgaataccacaagac 37454932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 276 - 344
Target Start/End: Original strand, 37820711 - 37820780
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcat 344  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| ||||||    
T  37820711 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcat 37820780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 1440179 - 1440255
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgataaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| |||| |||||||||||||||| ||| |||||||| |||||||||||| |||||||||| |||| |||||||    
T  1440179 aaattgaaaatagtcttgattgaataccacaagactttttcatgataaaaagtattttaaaatctcttagaatcatg 1440255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 12734076 - 12734144
Alignment:
Q  278 agagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  12734076 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 12734144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 539476 - 539539
Alignment:
Q  154 tccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||  |||||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  539476 tccatcaaaatccaatttattaaataatccttcgaaatttgaatgattttgaataccacaagac 539539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 10139380 - 10139450
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||| ||||||||||||||| |||||||    
T  10139380 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtattttaaaatcccttagaatcatg 10139450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 23753463 - 23753521
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  23753463 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 23753521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 35337707 - 35337637
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| || || ||||||||||||||||||||||| |||||||    
T  35337707 aaagagtcttgattgaataccacaagactttttcataataaaaaagtcttttaaaatcccttagaatcatg 35337637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 44762264 - 44762333
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccctta 337  Q
    ||||| ||||||||||||||||||||| ||| |||||||| || || |||||||||||||||||||||||    
T  44762264 aaattgaaaagagtcttgattgaataccacaagactttttcattataaaaaagtcttttaaaatccctta 44762333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 50762116 - 50762185
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||||  |||||| |||||||| ||||||||| |||| |||||||||||||| ||||    
T  50762116 acaaaatccatcaaaatccaatttatcaaacaatcattcgaaattagaatgattttgaataccacaagac 50762185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 6589543 - 6589465
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgataaaaa--gtcttttaaaatcccttaaaatcatg 345  Q
    |||||| |||||||||| ||||||||| ||| |||||||| ||||||||||  |||||||||| ||||||| |||||||    
T  6589543 aaattagaaagagtcttaattgaataccacaagactttttcatgataaaaaaagtcttttaaagtcccttagaatcatg 6589465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 44276580 - 44276506
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatcca 157  Q
    ||||| || ||||||||||| || |||||||| |||||| || ||||||| || |||||||||||||||||||||    
T  44276580 aatcccaaaaaatctcatgtcttcatgaaagattttttcttgttaaaatttcactagaaaatcccacaaaatcca 44276506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 270 - 345
Target Start/End: Complemental strand, 29029984 - 29029908
Alignment:
Q  270 aattaaaaagagtcttgattgaatacaacatgacttttttatgata-aaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| || ||||||||||||||||| |||  | ||||| |||||| |||||||||||||||||||||| |||||||    
T  29029984 aattagaatgagtcttgattgaataccacaatattttttcatgatataaaagtcttttaaaatcccttagaatcatg 29029908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 10105019 - 10105082
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||| ||| || |||||||| || |||||||||||||||||||||| |||||    
T  10105019 agtcttgattgaataccacaagatttttttataataaaaaagtcttttaaaatcccttgaaatc 10105082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 10216166 - 10216229
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||| ||| ||||||||||| || ||||| |||||||||||||||| |||||    
T  10216166 agtcttgattgaataccacaagacttttttataataaaaaaatcttttaaaatccctttaaatc 10216229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 10225795 - 10225858
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||  ||| ||||||||||| || |||||||||||||||||||||| |||||    
T  10225795 agtcttgattgaatagcacaagacttttttataataaaaaagtcttttaaaatcccttgaaatc 10225858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 6975924 - 6975817
Alignment:
Q  100 tgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataa 199  Q
    |||||| |||||||||| ||||||||| |||||  | |||||||||||||||| ||||          ||||| |||| ||| ||||||||||||||| |    
T  6975924 tgttttcatgaaagactgtttcatgctcaaattttactagaaaatcccacaaattcca----------atttagtaaataattcttcgaaatttgaatga 6975835  T
Q  200 ttttgaataccactagac 217  Q
    ||||||||||||| ||||    
T  6975834 ttttgaataccacaagac 6975817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 29449094 - 29449164
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgataaaa-agtcttttaaaatcccttaaaatcatg 345  Q
    ||||||| |||||||||||| ||| || ||||| || |||||| ||||||||||||||||||| |||||||    
T  29449094 aaagagtattgattgaataccacaagattttttcataataaaaaagtcttttaaaatcccttataatcatg 29449164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 33808026 - 33808106
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaac---atgacttttttatgataaaa-agtcttttaaaatcccttaaaatcatg 345  Q
    ||||| |||||| | |||||||||||| ||   | |||||||||||||||||| ||||||||||||||||||| |||||||    
T  33808026 aaattgaaaagaattttgattgaataccaccacaagacttttttatgataaaaaagtcttttaaaatcccttagaatcatg 33808106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 40246816 - 40246746
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| | ||| ||||||| |||||||||| |||| |||||||    
T  40246816 aaagagtcttgattgaataccacaagactttttcacgataaaaaagttttttaaaatctcttagaatcatg 40246746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 12103609 - 12103545
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||| ||||||| |||||||||||||||| |||| ||| || | |||||||||||||||||||    
T  12103609 aaattacaaagagtattgattgaatacaacaagactatttcataattaaaaagtcttttaaaatc 12103545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 23535890 - 23535946
Alignment:
Q  161 aaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||| ||| ||||||| ||||||| |||||||||| |||||||||||||| ||||    
T  23535890 aaatctaattaattaaacgatccttctaaatttgaatgattttgaataccacaagac 23535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 10660503 - 10660448
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  10660503 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 10660448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 31646522 - 31646577
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||||    
T  31646522 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 31646577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 36674368 - 36674423
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||||    
T  36674368 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 36674423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 45215410 - 45215469
Alignment:
Q  284 ttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||| ||| || |||||||| || |||||||||||||||||||||| |||||    
T  45215410 ttgattgaataccacaagatttttttattattaaaaagtcttttaaaatcccttcaaatc 45215469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 52810392 - 52810333
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttat-gataaaaagtcttttaaaatccc 334  Q
    |||||||||||||||||||| |||  ||||||| || | |||||||||||||||||||||    
T  52810392 aaagagtcttgattgaataccacaacactttttcatagttaaaaagtcttttaaaatccc 52810333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 341
Target Start/End: Original strand, 10225674 - 10225736
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaat 341  Q
    |||||||||||||||| ||| ||||||||||| || ||||||| ||||||||| |||| ||||    
T  10225674 agtcttgattgaataccacaagacttttttataatcaaaaagttttttaaaattccttgaaat 10225736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 15493965 - 15494027
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccctta 337  Q
    |||||||||||||| ||||| ||| || ||||| || || |||||||||||||||||||||||    
T  15493965 aaagagtcttgattaaatactacaagattttttcataattaaaaagtcttttaaaatccctta 15494027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 22057726 - 22057665
Alignment:
Q  286 gattgaatacaacatgacttttttatgataaaaa--gtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||| |||  ||||||| ||||||||||  |||||||||||||||||| |||||||    
T  22057726 gattgaataccacaatactttttcatgataaaaaaagtcttttaaaatcccttagaatcatg 22057665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 23753624 - 23753678
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatcc 333  Q
    |||||||||||||||| ||| |||||||| || | ||||||||||||||||||||    
T  23753624 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcc 23753678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 28146264 - 28146318
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcc 333  Q
    ||||||||||||||||  ||||||||||| || || |||||||||||||||||||    
T  28146264 agtcttgattgaataccccatgactttttcatcataaaaaagtcttttaaaatcc 28146318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 11431494 - 11431441
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  11431494 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 11431441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 27240481 - 27240534
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  27240481 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 27240534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 38772349 - 38772292
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttat-gataaaaagtcttttaaaatc 332  Q
    ||||| |||||||||||||| ||| |||||||| ||  ||||||||||||||||||||    
T  38772349 aaagaatcttgattgaataccacaagactttttcataaataaaaagtcttttaaaatc 38772292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 44906751 - 44906804
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  44906751 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 44906804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 45863040 - 45862983
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcc 146  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || |||||||    
T  45863040 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 45862983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 50901200 - 50901241
Alignment:
Q  301 gacttttttatgat-aaaaagtcttttaaaatcccttaaaat 341  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  50901200 gacttttttataattaaaaagtcttttaaaatcccttaaaat 50901241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 342
Target Start/End: Original strand, 6035293 - 6035353
Alignment:
Q  283 cttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    ||||||||||||| ||| || ||||| || || |||||||||||||||||||| |||||||    
T  6035293 cttgattgaataccacaagattttttcataattaaaaagtcttttaaaatcccataaaatc 6035353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 18749538 - 18749486
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaat 331  Q
    |||||||||||||||| ||| |||||||| || | ||||||||||||||||||    
T  18749538 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 18749486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 44276368 - 44276328
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgactttttt 309  Q
    |||||| |||||||||| ||||||||| |||||||||||||    
T  44276368 aaattacaaagagtcttaattgaataccacatgactttttt 44276328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 44762188 - 44762220
Alignment:
Q  277 aagagtcttgattgaatacaacatgactttttt 309  Q
    ||||||||||||||||||| |||||||||||||    
T  44762188 aagagtcttgattgaatactacatgactttttt 44762220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 4e-66; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 24776563 - 24776395
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  24776563 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 24776464  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  24776463 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 24776395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 5093049 - 5093217
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5093049 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 5093148  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||| |||||||||| ||||||||||| |||||||       ||||||||||| ||| ||||||||||    
T  5093149 ccttcaaaatttgaatgattttgaatactactagactttttttaagtgattaagcgtcttgattgaata 5093217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 16269899 - 16269731
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  16269899 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactataaaatcccacaaaatccatcaaaatctgatttattaaacaat 16269800  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  16269799 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 16269731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 20605444 - 20605276
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  20605444 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 20605345  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||| ||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  20605344 ccttcgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 20605276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 31170626 - 31170794
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  31170626 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 31170725  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||| ||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  31170726 ccttggaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 31170794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 14198579 - 14198747
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  14198579 caatcctaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 14198678  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| ||||||||||||||| |||       ||||||||||||||| ||||||||||    
T  14198679 ccttcgaaatttgaatgattttgaataccactggactttttttaagtgattaagagtcttgattgaata 14198747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 82 - 345
Target Start/End: Complemental strand, 9120334 - 9120072
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||| |||| ||| |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||    
T  9120334 caatcctaagaaatctcatgttttcatgaaagatttttccatactaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaat 9120235  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagacnnnnnnnnaaattaaaaagag 281  Q
    ||||  |||| ||||| |||||||||| |||||||        |||||||||||| || |||||||||||| |||||||        |||||  ||||||    
T  9120234 cctttaaaatctgaatgattttgaatatcactagattttttttaagtgattaagaatcttgattgaataac-acaagac-ttttttaaaattggaaagag 9120137  T
Q  282 tcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||| |||||| ||||| ||||| ||||||||||||||||||||||| |||||||    
T  9120136 tcttgattgaataccacatgattttttcatgataaaaaagtcttttaaaatcccttagaatcatg 9120072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 88 - 250
Target Start/End: Complemental strand, 35317264 - 35317102
Alignment:
Q  88 taagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 187  Q
    |||||||||| ||||||| |||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35317264 taagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttcg 35317165  T
Q  188 aaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  35317164 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 35317102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 12407588 - 12407420
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  12407588 caatcttaagaaatctcatgttttcatgaaagactttttcatggtaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 12407489  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||| |||||||||| |||||||||||||||||||       |||||||||||||||  |||||||||    
T  12407488 ccttcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaata 12407420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 43847854 - 43847686
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||||||    
T  43847854 caatcctaagaaatctcatgttttcatgacagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaattctgatttattaaacaat 43847755  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| ||||||||||| |||||||       ||||||||||||||| ||||||||||    
T  43847754 ccttcgaaatttgaatgattttgaatacaactagactttttttaagtgattaagagtcttgattgaata 43847686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 305467 - 305635
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||    
T  305467 caatcctaagaaatctcatgttttcatgaaagactttttcattctaaaatttcactagaaaatctcacaaaatccatcgaaatctgatttattaaacaat 305566  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | ||| |||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  305567 cattcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 305635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 1789630 - 1789482
Alignment:
Q  102 tttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataatt 201  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1789630 ttttgatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 1789531  T
Q  202 ttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||||||||||||       ||||||||||||||  ||||||||||    
T  1789530 ttgaataccactagactttttttaagtgattaagagttttgattgaata 1789482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 22551765 - 22551933
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||| | ||||| ||||||||    
T  22551765 caatcataagaaatctcatgttttcatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttaataaacaat 22551864  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | ||||||||||||||||||||||||||||||||||       |||||||||| |||| ||||||||||    
T  22551865 cattcgaaatttgaataattttgaataccactagactttttttaagtgattaaaagtcttgattgaata 22551933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 88 - 213
Target Start/End: Complemental strand, 32125455 - 32125330
Alignment:
Q  88 taagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 187  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32125455 taagaaatctcatattttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 32125356  T
Q  188 aaatttgaataattttgaataccact 213  Q
    |||||||||| |||||||||||||||    
T  32125355 aaatttgaatgattttgaataccact 32125330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 28844756 - 28844628
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| |  ||||||| || || ||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  28844756 aagaaatctcatctttttatgaaagactttttcttattaaaattacactacaaaattccacaaaatccatcaaaatctaatttattaaacaatccttcga 28844657  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  28844656 aatttgaatgattttgaataccacaagac 28844628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 33135823 - 33135696
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  33135823 aagaaatctcat-tttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 33135725  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  33135724 aatttgaatgattttgaataccacgagac 33135696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 44765974 - 44765815
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| ||||||         ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||    
T  44765974 caatcctaagaaatctcatgttttcatgaaa---------atgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 44765884  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | |||||||||||||| |||||||||||||||||||       |||||||||||||||  |||||||||    
T  44765883 ctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaata 44765815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 18177468 - 18177345
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| ||||||| |||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  18177468 aagaaatctcatctttttattaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcga 18177369  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| ||||||||||||||    
T  18177368 aatttgaatgattttgaataccac 18177345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 10657607 - 10657479
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||| |||| |||| |||||| |||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  10657607 aagaaatttcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 10657508  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  10657507 aatttgaatgattttgaataccacaagac 10657479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 26788971 - 26788859
Alignment:
Q  105 ttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttg 204  Q
    ||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| ||||||    
T  26788971 ttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttg 26788872  T
Q  205 aataccactagac 217  Q
    |||||||| ||||    
T  26788871 aataccacaagac 26788859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 25288360 - 25288237
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||| || || || ||||||| || || ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  25288360 aagaaatctcatcttttcatgaaagacgttctcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 25288261  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| ||||||||||||||    
T  25288260 aatttgaatgattttgaataccac 25288237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 43078764 - 43078656
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||| ||||||  ||||||||||||||| |||||    
T  43078764 aagaaatcttatctttttatgaaagactttttcatgttaaaattacactataaaatcccacaaaatccatgaaaatccaatttattaaacaatcattcga 43078665  T
Q  189 aatttgaat 197  Q
    |||||||||    
T  43078664 aatttgaat 43078656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 28740302 - 28740420
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||          ||||||||||||||||||||  |||||||||||||||||||||    
T  28740302 aagaaatctcatctttttatgaaagactttttcttgttaaaattaca----------ccacaaaatccatcaaaatccaatttattaaacaatccttcga 28740391  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  28740392 aatttgaatgattttgaataccacaagac 28740420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 7026746 - 7026677
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  7026746 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 7026677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 10125302 - 10125418
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||| |||||||||||||||||||||| || ||||||| || || ||||||||||||||| ||          ||||||||||||||    
T  10125302 caatcttaagaaatctcgtgtttttatgaaagactttttcttgttaaaatttcactaaaaaatcccacaaaattca----------atttattaaacaat 10125391  T
Q  182 ccttcgaaatttgaataattttgaata 208  Q
    |||| ||||||||||| ||||||||||    
T  10125392 cctttgaaatttgaatgattttgaata 10125418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 14198805 - 14198882
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||| |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  14198805 aaattagaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 14198882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 24776336 - 24776259
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||| |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  24776336 aaattagaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 24776259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 32125231 - 32125154
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgataaaaa-gtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||| || ||||||| ||||||||||||||||||||||||||    
T  32125231 aaattgaaaagagtcttgattgaataccacaagactttttcattataaaaaagtcttttaaaatcccttaaaatcatg 32125154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 13833441 - 13833553
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| || | ||||||||||||||| || ||||||| || || ||||||||||||||||||          ||||||||||||||||||| |    
T  13833441 aagaaatctcatcttgtcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcaa 13833530  T
Q  189 aatttgaataattttgaatacca 211  Q
    ||||||||| |||||||||||||    
T  13833531 aatttgaatgattttgaatacca 13833553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 26601270 - 26601370
Alignment:
Q  150 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaat 249  Q
    |||||||  |||||||||||||||||||||| | |||||||||||||| ||||||||||||||  |||       ||||||||||||||| |||||||||    
T  26601270 aaaatcccacaaaatctgatttattaaacaaacattcgaaatttgaatgattttgaataccacgtgactttttttaagtgattaagagtcttgattgaat 26601369  T
Q  250 a 250  Q
    |    
T  26601370 a 26601370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 20605126 - 20605056
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  20605126 aaagagtcttgattgaataccacaagactttttcatgattaaaaagtcttttaaaatcccttagaatcatg 20605056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 379079 - 379016
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaatacca 211  Q
    |||||||| |||||||||  ||||||||||||||||||| |||||||||| |||||||||||||    
T  379079 acaaaatctatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaatacca 379016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 6224626 - 6224684
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  6224626 caaaatccaatttattaaataatccttcgaaatttgaataattttgaataccacaagac 6224684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 16269665 - 16269595
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| || || ||||||||||||||||||||||| |||||||    
T  16269665 aaagagtcttgattgaataccacaagactttttcataataaaaaagtcttttaaaatcccttagaatcatg 16269595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 31170860 - 31170930
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||  ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  31170860 aaagagtcttgattgaatatcacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 31170930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 35317036 - 35316966
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||| ||||||||||||||| |||||||    
T  35317036 aaagagtcttgattgaataccacaagactttttcatgataaaaaagttttttaaaatcccttagaatcatg 35316966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 44765749 - 44765679
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||||| |||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  44765749 aaagagttttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 44765679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 3463863 - 3463745
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||          | ||||||||||||||||||  |||||||||||||||||| ||    
T  3463863 aagaaatctcatattttcatgaaagactttttcttgttaaaattaca----------ctacaaaatccatcaaaatccaatttattaaacaatcctttga 3463774  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    || |||||| ||||| |||||||| ||||    
T  3463773 aaattgaatgattttaaataccacaagac 3463745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 12407361 - 12407284
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| |||||| |||||||||||||| ||| |||||||| ||||| |||||||||||||||||| |||| |||||||    
T  12407361 aaattgaaaagaatcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatctcttagaatcatg 12407284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 305702 - 305773
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| |||||  |||||||||||||||||| |||| |||||||    
T  305702 aaagagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatcgcttagaatcatg 305773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 22552005 - 22552069
Alignment:
Q  282 tcttgattgaatacaacatgacttttttatgataaaa-agtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||| ||| |||||||| ||||||||| ||||||||||||||||||| |||||||    
T  22552005 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 22552069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 378949 - 378883
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||| ||| |||||||| || || ||||||||||||||||||||||| |||||||    
T  378949 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccttataatcatg 378883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 1789416 - 1789346
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgata-aaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||||| |||||||||||| ||| ||||||||||||||| |||| |||||||||||| |||| |||||||    
T  1789416 aaagagttttgattgaataccacaagacttttttatgataaaaaaatcttttaaaatctcttagaatcatg 1789346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 3574978 - 3574920
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  3574978 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatatcacaagac 3574920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 344
Target Start/End: Complemental strand, 19145004 - 19144929
Alignment:
Q  270 aattaaaaagagtcttgattgaatacaacatgacttttttatgata-aaaagtcttttaaaatcccttaaaatcat 344  Q
    |||| ||| |||| |||||||||||| ||| ||||||||||||||| |||| | ||||||||||||||| ||||||    
T  19145004 aattgaaatgagttttgattgaataccacaagacttttttatgataaaaaaatattttaaaatcccttagaatcat 19144929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 26601429 - 26601494
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcc 333  Q
    |||||| ||||||| |||||||||||| ||| |||||||| || || |||||||||||||||||||    
T  26601429 aaattagaaagagttttgattgaataccacaagactttttaataataaaaaagtcttttaaaatcc 26601494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 3858191 - 3858254
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||| | |  | |||||||| || ||||||||||||||||||||||||||||    
T  3858191 agtcttgattgaataccaaaaaagttttttatcattaaaaagtcttttaaaatcccttaaaatc 3858254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 18176474 - 18176537
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||| ||| || |||||||| || ||||| |||||||||||||||| |||||    
T  18176474 agtcttgattgaataccacaagatttttttattattaaaaaatcttttaaaatcccttcaaatc 18176537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 26788754 - 26788699
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  26788754 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 26788699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 28844525 - 28844470
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  28844525 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 28844470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 215465 - 215518
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  215465 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 215518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 6224576 - 6224633
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcc 146  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || |||||||    
T  6224576 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 6224633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 21370638 - 21370687
Alignment:
Q  168 atttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||| ||||||| |||| |||||||||| |||||||||||||| ||||    
T  21370638 atttatcaaacaatacttcaaaatttgaatgattttgaataccacaagac 21370687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 43078643 - 43078590
Alignment:
Q  282 tcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  43078643 tcttgattgaataccacaagactttttcataatcaaaaagtcttttaaaatccc 43078590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 333
Target Start/End: Original strand, 17330880 - 17330912
Alignment:
Q  301 gacttttttatgataaaaagtcttttaaaatcc 333  Q
    ||||||||||| |||||||||||||||||||||    
T  17330880 gacttttttattataaaaagtcttttaaaatcc 17330912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 32125307 - 32125275
Alignment:
Q  277 aagagtcttgattgaatacaacatgactttttt 309  Q
    ||||||||||||||||||| |||||||||||||    
T  32125307 aagagtcttgattgaataccacatgactttttt 32125275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 124; Significance: 1e-63; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 15033 - 15201
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  15033 caatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 15132  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  15133 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 15201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 15267 - 15320
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaa 328  Q
    |||||||||||||||||||| ||| || ||||| ||||| ||||||||||||||    
T  15267 aaagagtcttgattgaataccacaagattttttcatgataaaaaagtcttttaa 15320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 124; Significance: 1e-63; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 15676 - 15844
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  15676 caatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 15775  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  15776 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 15844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 15910 - 15963
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaa 328  Q
    |||||||||||||||||||| ||| || ||||| ||||| ||||||||||||||    
T  15910 aaagagtcttgattgaataccacaagattttttcatgataaaaaagtcttttaa 15963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 82 - 345
Target Start/End: Original strand, 38895 - 39157
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  38895 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 38994  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagacnnnnnnnnaaattaaaaagag 281  Q
    ||||| |||||||||| |||||||||| ||||||||       ||||||||||||||| | ||||||| || |||||||        |||| | |||||     
T  38995 ccttccaaatttgaatgattttgaatatcactagacttcttttaagtgattaagagtctttattgaat-accacaagac-tttttttaaatgataaagaa 39092  T
Q  282 tcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||| ||| |||||||| ||||| ||||||||||||||||||| ||| |||||||    
T  39093 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatccattagaatcatg 39157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 82 - 345
Target Start/End: Complemental strand, 102302 - 102039
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  102302 caatcataagaaatctcatatttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 102203  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagac-nnnnnnnnaaattaaaaaga 280  Q
    | |||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||| || |||||||         |||| | |||||    
T  102202 ctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaat-accacaagactctttttttaaatgacaaaga 102104  T
Q  281 gtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
     |||||||||||||  |||  |||||||| | || ||||||||||||||||||||||| |||||||    
T  102103 atcttgattgaataacacaaaactttttt-taataaaaaagtcttttaaaatcccttagaatcatg 102039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 38605 - 38772
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  38605 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctga-ttattaaacaat 38703  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  38704 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 38772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 38755 - 38824
Alignment:
Q  277 aagagtcttgattgaatacaacatgacttttttatgataaaaa-gtcttttaaaatcccttaaaatcatg 345  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||  ||||||||||||||||| |||||||    
T  38755 aagagtcttgattgaataccacaagactttttcatgataaaaatatcttttaaaatcccttagaatcatg 38824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 25331337 - 25331169
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  25331337 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 25331238  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||| ||||||||||| |||||||||| ||||||||       ||||||||||||||| ||||||||||    
T  25331237 cctttgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaata 25331169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 55303049 - 55302881
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||    
T  55303049 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaatatccatcaaaatctgatttattaaacaat 55302950  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  55302949 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 55302881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 41881082 - 41881214
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  41881082 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 41881181  T
Q  182 ccttcgaaatttgaataattttgaataccacta 214  Q
    |||||||||||||||| ||||||||||||||||    
T  41881182 ccttcgaaatttgaatgattttgaataccacta 41881214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 83 - 250
Target Start/End: Original strand, 32950837 - 32951004
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||    
T  32950837 aatcttaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaatc 32950936  T
Q  183 cttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  32950937 cttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 32951004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 1045013 - 1044845
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  1045013 caattctaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 1044914  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||||| ||||||  ||||||||||||||||||       ||||||||||||||| ||||||||||    
T  1044913 ccttcgaaagttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaata 1044845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 41321016 - 41320881
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||    
T  41321016 caatcttaagaaatctcatgtttttatgaaagactttttcatactaaaatttcactagaacatcccacaaaatccatcaaaatctgatttattaaacaat 41320917  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||||||||||| |||||||||||||||||||    
T  41320916 ccttcgaaatttgaatgattttgaataccactagac 41320881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 1113099 - 1112931
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||  | ||| |||||||||||||||||||||||||||||||||||||||||    
T  1113099 caatcctaagaaatctcatgttttcatgaaagactttttcatgttaaaattttactaggaaatcccacaaaatccatcaaaatctgatttattaaacaat 1113000  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | || ||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  1112999 catttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 1112931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 7007580 - 7007412
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||| |  |||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||    
T  7007580 caatcttaagaaatctcatgttttcatgaaaaaaattttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaat 7007481  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  7007480 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 7007412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 12113151 - 12112983
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||||||| ||||||||||||||||||||||    
T  12113151 caatcccaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccattaaaatctgatttattaaacaat 12113052  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| ||||||||||||| |||||       ||||||||||||||  ||||||||||    
T  12113051 ccttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagttttgattgaata 12112983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 30009677 - 30009845
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||    
T  30009677 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 30009776  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | ||  |||||| ||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  30009777 catttaaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 30009845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 34228583 - 34228718
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||    
T  34228583 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatctgatttattaaacaat 34228682  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    | |||||||||| ||| |||||||||||||||||||    
T  34228683 cattcgaaatttcaatgattttgaataccactagac 34228718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 42786890 - 42786722
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||| ||| ||||||| || |||||||| ||||||||||||||||||| ||||||||||||||||    
T  42786890 caatcataagaaatctcatgttttcatgaaagacttttttatgataaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaat 42786791  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       || |||||||||||| ||||||||||    
T  42786790 ccttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaata 42786722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 39479355 - 39479485
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  39479355 caatcctaagaaatctcatgctttcatgaaagactttttcctgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 39479454  T
Q  182 ccttcgaaatttgaataattttgaataccac 212  Q
     ||||||||||||||| ||||||||||||||    
T  39479455 tcttcgaaatttgaatgattttgaataccac 39479485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 111 - 344
Target Start/End: Complemental strand, 25446227 - 25445996
Alignment:
Q  111 aagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaatacc 210  Q
    |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  25446227 aagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacc 25446128  T
Q  211 actagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagacnnnnnnnnaaattaaaaagagtcttgattgaatacaacatgactttttta 310  Q
    |||||||       ||||||||||||||| ||||||||| || ||||||         |||| | ||| | |||||||||||||  ||| |||||||| |    
T  25446127 actagactttttttaagtgattaagagtcttgattgaat-accacaaga-atttttttaaatgacaaa-aatcttgattgaataatacaagactttttca 25446031  T
Q  311 tgat-aaaaagtcttttaaaatcccttaaaatcat 344  Q
    |||| ||||||||||||||||||||||||||||||    
T  25446030 tgataaaaaagtcttttaaaatcccttaaaatcat 25445996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 22202221 - 22202053
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||| | ||||||||||||||    
T  22202221 caatgctaagaaatctaatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaattttatttattaaacaat 22202122  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    | || ||||||| ||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  22202121 cttttgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 22202053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 37046450 - 37046620
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattc-cattagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 180  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||  || |||||||| |||||||||||||||||||||||||||||||||||    
T  37046450 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaattttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaa 37046549  T
Q  181 tccttcgaaatttgaataattttgaataccactagac-nnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||||||||||||| ||||| |||| ||||||||        ||||||||||||||| ||||||||||    
T  37046550 tccttcgaaatttgaatgattttaaatatcactagacttttttttaagtgattaagagtcttgattgaata 37046620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 7249795 - 7249900
Alignment:
Q  112 agactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaatacca 211  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7249795 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 7249894  T
Q  212 ctagac 217  Q
    ||||||    
T  7249895 ctagac 7249900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 28541874 - 28541736
Alignment:
Q  112 agactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaatacca 211  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  28541874 agactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacca 28541775  T
Q  212 ctagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||       ||||||||||||||| ||||||||||    
T  28541774 ctagactttttttaagtgattaagagtcttgattgaata 28541736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 46635648 - 46635810
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||      ||||| ||||||||||||||    
T  46635648 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatc------aatcttatttattaaacaat 46635741  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| ||||||||||| |||| ||       ||||||||||||||| ||||||||||    
T  46635742 ccttcgaaatttgaatgattttgaatactactaaactttttttaagtgattaagagtcttgattgaata 46635810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 3436799 - 3436631
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||| ||||||| |||||| ||||||||||| ||||||| || || ||||||||||||||| ||||||||||||||||||||||||||    
T  3436799 caattctaagaaatcttatgttttcatgaaaaactttttcatgttaaaatttcactacaaaatcccacaaaattcatcaaaatctgatttattaaacaat 3436700  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| ||||||||||||| ||||        || |||||||||||| ||||||||||    
T  3436699 ccttcgaaatttgaatgattttgaataccattagattttttttaaatgattaagagtcttgattgaata 3436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 53276046 - 53275910
Alignment:
Q  82 caatcctaagaaatctcatgttttta-tgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 180  Q
    ||||||||| |||||| | ||||||| |||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  53276046 caatcctaaaaaatctaaagtttttaatgaaagactttttcatgctaaaattttattagaaaatctcacaaaatccatcaaaatctgatttattacacaa 53275947  T
Q  181 tccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||| ||||| |||| ||||||||    
T  53275946 tccttcgaaatttgaatgattttaaatatcactagac 53275910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 24130981 - 24131098
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagacttttt-catgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 180  Q
    |||||||||||||||||||||||| |||||||| ||||| ||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  24130981 caatcctaagaaatctcatgttttcatgaaagatttttttcatcctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 24131080  T
Q  181 tccttcgaaatttgaata 198  Q
    || |||||||||||||||    
T  24131081 tcattcgaaatttgaata 24131098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 31314742 - 31314889
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||          |||||||||||||||||||||||    
T  31314742 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccca----------caaaatctgatttattaaacaat 31314831  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtc 239  Q
    |||||||||||||||| |||||||||||||||||||       |||||||||||||||    
T  31314832 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc 31314889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 5441603 - 5441475
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  5441603 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 5441504  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  5441503 aatttgaatgattttgaataccacaagac 5441475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 27768255 - 27768127
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  27768255 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 27768156  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  27768155 aatttgaatgattttgaataccacaagac 27768127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 54341343 - 54341215
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  54341343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 54341244  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  54341243 aatttgaatgattttgaataccacaagac 54341215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 19740933 - 19741043
Alignment:
Q  107 atgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaa 206  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||    
T  19740933 atgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgatttttaa 19741032  T
Q  207 taccactagac 217  Q
    |||||| ||||    
T  19741033 taccacaagac 19741043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 89 - 309
Target Start/End: Original strand, 54853475 - 54853693
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| |||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  54853475 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 54853574  T
Q  189 aatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagacnnnnnnnnaaattaaaaagagtcttgat 288  Q
    |||||||||||||||||||||||| ||||       ||||||| || |||| ||||||||| ||  ||||||        |||| |||||||||||||||    
T  54853575 aatttgaataattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaat-acttcaagac-ttttttaaaatgaaaaagagtcttgat 54853672  T
Q  289 tgaatacaacatgactttttt 309  Q
    ||||||| ||| |||||||||    
T  54853673 tgaataccacaagactttttt 54853693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 37828409 - 37828537
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| |  ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  37828409 aagaaatctcatcttttcatgaaagactttttctttttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 37828508  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  37828509 aatttgaatgattttgaataccacaagac 37828537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 23465106 - 23464993
Alignment:
Q  137 tagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaaga 236  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||       ||||||||||||    
T  23465106 tagaaaatcccacaaaatccatcaaattctgatttattaaacaatccttcgaaatttgaatggttttgaataccactagacttattttaagtgattaaga 23465007  T
Q  237 gtcatgattgaata 250  Q
    ||| ||||||||||    
T  23465006 gtcttgattgaata 23464993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 27454078 - 27454210
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||| |||| | ||||||| ||||||||||||||||||| |||||| || |||||||| ||||||||| |||||||||||||||||||||| |||    
T  27454078 caatcttaacaaatattatgttttcatgaaagactttttcatgccaaaatttcactagaaaattccacaaaattcatcaaaatctgatttattaaataat 27454177  T
Q  182 ccttcgaaatttgaataattttgaataccacta 214  Q
    | ||| |||||||||| ||||||||||||||||    
T  27454178 ctttcaaaatttgaatgattttgaataccacta 27454210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 32322290 - 32322162
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||| ||||| |  ||||||| || || |||||||||||||||||||||||||   |||||||||||||||||||||    
T  32322290 aagaaatctcatctttttatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatccttcga 32322191  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  32322190 aatttgaatgattttgaataccacaagac 32322162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 48261326 - 48261198
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| |||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  48261326 aagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 48261227  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  48261226 aatttgaatgattttgaataccacaagac 48261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 25504696 - 25504807
Alignment:
Q  139 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagt 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||       ||||||||||||||    
T  25504696 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatatcactggactttttttaagtgattaagagt 25504795  T
Q  239 catgattgaata 250  Q
    | ||||||||||    
T  25504796 cttgattgaata 25504807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 51321120 - 51320992
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| || || |||||  |||||||||||||||||||  |||||||||||||||||||||    
T  51321120 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactataaaattacacaaaatccatcaaaatccaatttattaaacaatccttcga 51321021  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  51321020 aatttgaatgattttgaataccacaagac 51320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 40537161 - 40537280
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||          |||||||||||||||||||| ||||||||||||||||    
T  40537161 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca----------ccacaaaatccatcaaaatcagatttattaaacaatc 40537250  T
Q  183 cttcgaaatttgaataattttgaataccac 212  Q
     |||||||||| ||| ||||||||||||||    
T  40537251 attcgaaatttaaatgattttgaataccac 40537280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 92 - 217
Target Start/End: Complemental strand, 37916023 - 37915898
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    |||||| || |||| ||||| ||||||||| || ||||| | || || ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  37916023 aaatcttatcttttcatgaatgactttttcttgttaaaagtacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 37915924  T
Q  192 ttgaataattttgaataccactagac 217  Q
    |||||| |||||||||||||| ||||    
T  37915923 ttgaatgattttgaataccacaagac 37915898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 91 - 211
Target Start/End: Original strand, 44770862 - 44770982
Alignment:
Q  91 gaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaa 190  Q
    ||||||||||||  | ||||||||||||||| |  ||||||| || ||||||||||||||||||||| |||||||  ||||||||||||||||||| |||    
T  44770862 gaaatctcatgtcgtcatgaaagactttttcttcttaaaatttcactagaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcaaaa 44770961  T
Q  191 tttgaataattttgaatacca 211  Q
    ||||||| |||||||||||||    
T  44770962 tttgaatgattttgaatacca 44770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 9163245 - 9163147
Alignment:
Q  119 ttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||||||||| || |||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  9163245 ttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatttaatttattaaacaatccttcgaaatttgaatgattttgaatatcacaagac 9163147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 342
Target Start/End: Complemental strand, 23987403 - 23987161
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||          | ||||||||||||||||||| |||||||||||||||||||||    
T  23987403 aagaaatctcatcttttcatgaaagactttttcttgttaaaattaca----------ctacaaaatccatcaaaatctaatttattaaacaatccttcga 23987314  T
Q  189 aatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataacaacaagacnnnnnnnnaaattaaaaagagtcttgat 288  Q
    ||||||||| |||||||||||||| ||||       ||||||| || |||  ||||||||| ||  ||||||        |||| | ||||||| |||||    
T  23987313 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagttttgattgaat-acctcaagac-ttttttaaaatgacaaagagtattgat 23987216  T
Q  289 tgaatacaacatgacttttttatga-taaaaagtcttttaaaatcccttaaaatc 342  Q
    ||||||| ||| |||||||| || | ||||||||||||||||||||| |||||||    
T  23987215 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatc 23987161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 8712065 - 8711978
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaa 176  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  8712065 aagaaatctcatgttttgatgaaagactttttcttgctaaaatttcactataaaatcccacaaaatccatcaaaatccaatttattaa 8711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 39307253 - 39307388
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| |||||||||||||||||||||| | | ||||||||||| ||||||| || |||||||||||||||||| ||||||||    ||| |||||| |||    
T  39307253 caattctaagaaatctcatgtttttatcagaaactttttcatgttaaaatttcactagaaaatcccacaaaattcatcaaaactcaattcattaaataat 39307352  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    | || ||||||||||| ||| |||||||||| ||||    
T  39307353 ctttagaaatttgaatgattatgaataccacaagac 39307388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 56445362 - 56445474
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||||| |||||||||||||||||| ||||||| || || |||||||||||||||||||||          ||||||||||||||| |||||    
T  56445362 aagaaatctcatgtctttatgaaagactttttcttgctaaagtttcactagaaaatcccacaaaatcca----------atttattaaacaatcattcga 56445451  T
Q  189 aatttgaataattttgaatacca 211  Q
    ||||||||| |||||||||||||    
T  56445452 aatttgaatgattttgaatacca 56445474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 11090510 - 11090435
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatcca 157  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||| || || ||||||||||||||||||    
T  11090510 caatcctaagaaatctcatgtttttattaaagactttttaatgctaaaatttcactaaaaaatcccacaaaatcca 11090435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 41725321 - 41725196
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| |||||| || ||||||| || || ||||||||||||||| ||||||||||  ||   |||||||||||||| |    
T  41725321 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactataaaatcccacaaaattcatcaaaatccaat---ttaaacaatccttcaa 41725225  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||| ||| ||||    
T  41725224 aatttgaatgattttgaatatcacaagac 41725196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 12913413 - 12913301
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||||| || |||||| |||||||| || ||||||| || |||||||||||||||||||||          ||||||||||||||||||| |    
T  12913413 aagaaatctcatgtcttcatgaaatactttttcttgttaaaatttcactagaaaatcccacaaaatcca----------atttattaaacaatccttcaa 12913324  T
Q  189 aatttgaataattttgaatacca 211  Q
    ||||||||| |||||||||||||    
T  12913323 aatttgaatgattttgaatacca 12913301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 24736534 - 24736447
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaa 176  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||| || ||||||||| |||||||||||||||||||  |||||||||    
T  24736534 aagaaatctcatgttttcatgaaagacttcttcttgttaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaa 24736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 29649731 - 29649802
Alignment:
Q  146 ccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  29649731 ccacaaaatccatcaaaatccaatttattaaacaatctttcgaaatttgaatgattttgaataccacaagac 29649802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 36479299 - 36479366
Alignment:
Q  150 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  36479299 aaaatccatcaaaatccaatttattaaataatccttcgaaatttgaataattttgaataccacgagac 36479366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 39479584 - 39479661
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||  ||||||||||||    
T  39479584 aaattgaaaagagtcttgattgaataccacaagacttttttatgataaaaaagtcttttaaaatttcttaaaatcatg 39479661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 40537372 - 40537449
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgata-aaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||| |||||||||| ||||||||| ||| ||||||||||||||| |||||||||||||||||||||| |||||||    
T  40537372 aaattagaaagagtcttaattgaataccacaagacttttttatgatacaaaagtcttttaaaatcccttacaatcatg 40537449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 41881317 - 41881388
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| |||||  |||||||||||||||||||||||||||||||    
T  41881317 aaagagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttaaaatcatg 41881388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 24131206 - 24131276
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  24131206 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 24131276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 28371086 - 28371001
Alignment:
Q  126 taaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaatacca 211  Q
    ||||||| || |||||||||||||||||| || ||||||   ||||||||||||||||||  |||||||||| |||||||||||||    
T  28371086 taaaatttcactagaaaatcccacaaaattcaccaaaattcaatttattaaacaatcctttaaaatttgaatgattttgaatacca 28371001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 28541677 - 28541600
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgataaaaa-gtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||| || ||||||| |||||||||||||||||| |||||||    
T  28541677 aaattgaaaagagtcttgattgaataccacaagactttttcataataaaaatgtcttttaaaatcccttagaatcatg 28541600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 30967316 - 30967434
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || |||| |||||||| |||||| || ||||||| || || ||||||||||||||||||          |||||||||||||||||| ||    
T  30967316 aagaaatcttattttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcctttga 30967405  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  30967406 aatttgaatgattttgaataccacaagac 30967434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 32951063 - 32951140
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||| || || ||||||||||||||||||||||| |||||||    
T  32951063 aaattgaaaagagtcttgattgaataccacaagactttttcattataaaaaagtcttttaaaatcccttagaatcatg 32951140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 34228809 - 34228878
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccctta 337  Q
    ||||| ||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||    
T  34228809 aaattgaaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatccctta 34228878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 37046679 - 37046756
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgataaaaa-gtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||||||||  ||||||||||| ||||| |||||||    
T  37046679 aaattgaaaagagtcttgattgaataccacaagacttttttatgataaaaatatcttttaaaattccttagaatcatg 37046756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 20021495 - 20021423
Alignment:
Q  126 taaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaata 198  Q
    ||||||| ||||| ||||||||| |||||||| |||||||| ||||||||||||||||||  |||||||||||    
T  20021495 taaaatttcattaaaaaatcccataaaatccagcaaaatctaatttattaaacaatcctttaaaatttgaata 20021423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 42786739 - 42786669
Alignment:
Q  277 aagagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||||||||||||||||| ||| |||||||| |||||  ||||||||||||||||||||||| |||||||    
T  42786739 aagagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatg 42786669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 1044782 - 1044712
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  1044782 aaagagtcttgattgaataccacaagactttttcatgataaaaaaatcttttaaaatcccttagaatcatg 1044712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 22201987 - 22201917
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||  ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  22201987 aaagagtcttgattgaatatcacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 22201917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 30009911 - 30009981
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgataaaaa-gtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||||| | |||||||| || ||||||| |||||||||||||||||| |||||||    
T  30009911 aaagagtcttgattgaatacaataagactttttcataataaaaatgtcttttaaaatcccttagaatcatg 30009981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 32684065 - 32684123
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  32684065 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 32684123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 49834890 - 49834948
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  49834890 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 49834948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 7007352 - 7007275
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgataaaaa-gtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| |||  ||||||| || ||||||| |||| |||||||||||||||||||||    
T  7007352 aaattgaaaagagtcttgattgaataccacaaaactttttcattataaaaaagtctattaaaatcccttaaaatcatg 7007275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 7250000 - 7250077
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| || ||||| ||||| ||||||||||||||||| ||||| |||||||    
T  7250000 aaattgaaaagagtcttgattgaataccacaagattttttcatgataaaaaagtcttttaaaattccttagaatcatg 7250077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 19741142 - 19741211
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgataaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||||||||||||||  ||| |||||||    
T  19741142 aaagagtcttgattgaataccacaagattttttcatgataaaaagtcttttaaaatcttttagaatcatg 19741211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 28484039 - 28483970
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||||  |||||||  |||||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  28484039 acaaaatcctacaaaatccaatttattaaataatccttcgaaatttgaatgattttgaataccacgagac 28483970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 49501526 - 49501646
Alignment:
Q  89 aagaaatctcatgtttttat--gaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttc 186  Q
    |||||||||||| |||||||  ||||||||||||| || ||||||| || || ||||| ||||||||||||          ||||||||||||||| |||    
T  49501526 aagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------atttattaaacaatcattc 49501615  T
Q  187 gaaatttgaataattttgaataccactagac 217  Q
    ||||||||||| ||||||||| |||| ||||    
T  49501616 gaaatttgaatgattttgaatgccacaagac 49501646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 49507591 - 49507711
Alignment:
Q  89 aagaaatctcatgtttttat--gaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttc 186  Q
    |||||||||||| |||||||  ||||||||||||| || ||||||| || || ||||| ||||||||||||          ||||||||||||||| |||    
T  49507591 aagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------atttattaaacaatcattc 49507680  T
Q  187 gaaatttgaataattttgaataccactagac 217  Q
    ||||||||||| ||||||||| |||| ||||    
T  49507681 gaaatttgaatgattttgaatgccacaagac 49507711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 46635876 - 46635947
Alignment:
Q  276 aaagagtcttgattgaatacaacatgactttttt-atgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| ||||||||| ||||| |||||||||||||||||| |||| |||||||    
T  46635876 aaagagtcttgattgaataccacaagacttttttcatgataaaaaagtcttttaaaatctcttagaatcatg 46635947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 5800107 - 5800049
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||  |||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  5800107 caaaatccaatttattaaacaatcctttgaaatttgaatgattttgaataccacaagac 5800049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 20021316 - 20021250
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaat 341  Q
    |||||||||||||| ||||| ||| |||||||| || || |||||||||||||||||||||||||||    
T  20021316 aaagagtcttgattaaataccacaagactttttcataattaaaaagtcttttaaaatcccttaaaat 20021250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 25331103 - 25331033
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||  ||| |||||||    
T  25331103 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcttttagaatcatg 25331033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 31314955 - 31315032
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| |||| |||||||||||||||| |||  ||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  31314955 aaattgaaaaaagtcttgattgaataccacaatactttttcatgataaaaaaatcttttaaaatcccttagaatcatg 31315032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 50018391 - 50018322
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||| |||||   ||||||||||||||||||| |||||||||| || ||||||||||| ||||    
T  50018391 acaaaatccattaaaattcaatttattaaacaatccttcaaaatttgaatgatcttgaataccacaagac 50018322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 55302822 - 55302745
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgataaaaa-gtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| | |  ||||||| || ||||||| ||||| ||||||||||||||||||||    
T  55302822 aaattgaaaagagtcttgattgaataccataacactttttcattataaaaaagtcttctaaaatcccttaaaatcatg 55302745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 41581795 - 41581903
Alignment:
Q  88 taagaaatctcatgtttttatgaaagacttttt-catgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttc 186  Q
    |||||||||||||||||  |||||| | ||||| |||| ||||||| || ||||||||||||||||||  |||  ||||  ||||||||||||||  |||    
T  41581795 taagaaatctcatgtttacatgaaatatttttttcatgttaaaatttcactagaaaatcccacaaaatatatc--aatccaatttattaaacaattattc 41581892  T
Q  187 gaaatttgaat 197  Q
     ||||||||||    
T  41581893 aaaatttgaat 41581903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 25504873 - 25504931
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcc 333  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||| |||||||||||    
T  25504873 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtattttaaaatcc 25504931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 344
Target Start/End: Complemental strand, 23464927 - 23464856
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat---aaaaagtcttttaaaatcccttaaaatcat 344  Q
    |||||||||||||||||||| ||| |||||||| |||||   ||||| ||||||||||| ||||| ||||||    
T  23464927 aaagagtcttgattgaataccacaagactttttcatgataaaaaaaaatcttttaaaattccttagaatcat 23464856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 28100587 - 28100651
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||| ||| ||||||||||| ||  |||||||||||||||| ||||| |||||    
T  28100587 agtcttgattgaataccacaagacttttttataataaaaaaagtcttttaaaaccccttgaaatc 28100651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 30967537 - 30967602
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcat 344  Q
    |||||||||||||||| ||| |||||||| || || ||||| |||||||||||||| |||||||||    
T  30967537 agtcttgattgaataccacaagactttttcataattaaaaaatcttttaaaatcccataaaatcat 30967602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 37915753 - 37915688
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcat 344  Q
    |||||||||||||||| ||| |||||||| || || |||||||||||||||||||| || ||||||    
T  37915753 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcat 37915688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 1112865 - 1112807
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatc 332  Q
    |||||||||||||||||||  ||| |||||||| |||||  ||||||||||||||||||    
T  1112865 aaagagtcttgattgaataacacaagactttttcatgataaaaaaagtcttttaaaatc 1112807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 5441372 - 5441317
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  5441372 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 5441317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 28847111 - 28847170
Alignment:
Q  284 ttgattgaatacaacatgacttttttatgataaaa-agtcttttaaaatcccttaaaatc 342  Q
    |||||||||||| ||  ||||||||||| |||||| ||||||||||||||| ||||||||    
T  28847111 ttgattgaataccactagacttttttattataaaaaagtcttttaaaatcctttaaaatc 28847170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 41762058 - 41761995
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgataa-aaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||| ||||| ||| ||||||||||| || | ||||||||||||||||| ||||||||    
T  41762058 agtcttgattcaataccacaagacttttttataatcacaaagtcttttaaaatcctttaaaatc 41761995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 44646800 - 44646737
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||| ||| || |||||||| || |||||||||||||||||| ||| |||||    
T  44646800 agtcttgattgaataccacaagatttttttatcattaaaaagtcttttaaaatctcttgaaatc 44646737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 54341112 - 54341057
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  54341112 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 54341057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 12913202 - 12913133
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccctta 337  Q
    |||||| |||||||||||||||||||| ||| |||||||| |  | |||||| |||||||||||| ||||    
T  12913202 aaattataaagagtcttgattgaataccacaagactttttcaaaattaaaaaatcttttaaaatctctta 12913133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 27768022 - 27767969
Alignment:
Q  282 tcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  27768022 tcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 27767969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 37828640 - 37828693
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  37828640 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 37828693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 310
Target Start/End: Complemental strand, 55302898 - 55302865
Alignment:
Q  277 aagagtcttgattgaatacaacatgactttttta 310  Q
    ||||||||||||||||||| ||||||||||||||    
T  55302898 aagagtcttgattgaataccacatgactttttta 55302865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 7007429 - 7007397
Alignment:
Q  277 aagagtcttgattgaatacaacatgactttttt 309  Q
    ||||||||||||||||||| |||||||||||||    
T  7007429 aagagtcttgattgaataccacatgactttttt 7007397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 32950987 - 32951019
Alignment:
Q  277 aagagtcttgattgaatacaacatgactttttt 309  Q
    ||||||||||||||||||| |||||||||||||    
T  32950987 aagagtcttgattgaataccacatgactttttt 32951019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 6e-59; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 19451808 - 19451976
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  19451808 caatcataagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacgat 19451907  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||| ||||| ||||    
T  19451908 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattaaata 19451976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 21222347 - 21222179
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||    
T  21222347 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatcttatttattaaacaat 21222248  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| |||||||||||| ||||||       ||||||||||||||| ||||||||||    
T  21222247 ccttcgaaatttgaatgattttgaatacctctagactttttttaagtgattaagagtcttgattgaata 21222179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 45760009 - 45760177
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  45760009 caatcctaagaaatctcatgttttcatcaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 45760108  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||| ||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||    
T  45760109 ccttcgaagtttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaata 45760177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 50192550 - 50192719
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  50192550 caatcctaaaaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 50192649  T
Q  182 ccttcgaaatttgaataattttgaataccactagac-nnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||| |||||||||| |||||||||||||||||||        ||||||||||||||| ||||||||||    
T  50192650 ccttcaaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaata 50192719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 6304252 - 6304387
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  6304252 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 6304351  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||||||||||| |||||||||||||||||||    
T  6304352 ccttcgaaatttgaatgattttgaataccactagac 6304387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 47654351 - 47654486
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||||    
T  47654351 caatcctaagaaatctcatgttttcatgaaatactttttcatgctaaaatttccctagaaaattccacaaaatccatcaaaatctgatttattaaacaat 47654450  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||||||||||||||||||||||    
T  47654451 ccttcgaaatttgaataattttgaataccactagac 47654486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 49198269 - 49198400
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  49198269 caatcctaagaaatatcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 49198368  T
Q  182 ccttcgaaatttgaataattttgaataccact 213  Q
    |||||||||||||||| |||||||||||||||    
T  49198369 ccttcgaaatttgaatgattttgaataccact 49198400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 28824373 - 28824540
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||| |  |||||||||||||||||||||||||||||||||||||||||||||    
T  28824373 caatcctaagaaatctcatgtttttataaaagactttttcatgttaaaatttccctagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 28824472  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
     ||||||||||||||| |||||||||||||| ||||       ||||||||||||||| ||||||||||    
T  28824473 -cttcgaaatttgaatgattttgaataccacaagactgtttttaagtgattaagagtcttgattgaata 28824540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 35279872 - 35279704
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||||||||||| |||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  35279872 caattctaagaaatctcatgttttcatgaaagactttttcatgttgaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 35279773  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||| ||| |||||||||||||||||||       |||||||||| |||| ||||||||||    
T  35279772 ccttcgaaatttaaatgattttgaataccactagactttttttaagtgattaatagtcttgattgaata 35279704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 49418279 - 49418116
Alignment:
Q  87 ctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttc 186  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||     
T  49418279 ctaagaaatctcatattttcatgaaagattttttcatgctaaaatttcaatagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttt 49418180  T
Q  187 gaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||||||| |||||||||||||||||||       ||||||||||||||| | ||||||||    
T  49418179 gaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaata 49418116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 35679128 - 35679296
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||  |||||||||||||||||||||||||||||||    
T  35679128 caatcttaagaaatctcatgtcttcatgaaagactttttcatgctaaaatttcactagaaaatcccatcaaatccatcaaaatctgatttattaaacaat 35679227  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |||||||||||||||| ||||||||||||||  |||       ||||||||||||||| ||||||||||    
T  35679228 ccttcgaaatttgaatgattttgaataccacatgactttttttaagtgattaagagtcttgattgaata 35679296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 45536150 - 45535976
Alignment:
Q  82 caatcctaagaaatctcatgttttt------atgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttatta 175  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  45536150 caatcctaagaaatctcatgttttcgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 45536051  T
Q  176 aacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||||| |||||||||||||| |||||||||||||||||||       ||| ||||||||||| ||||||||||    
T  45536050 aacaatctttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaata 45535976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 82 - 253
Target Start/End: Complemental strand, 29556305 - 29556133
Alignment:
Q  82 caatcctaagaaatctcatgttttt-atgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 180  Q
    ||||||||||||||||||||| ||| || ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  29556305 caatcctaagaaatctcatgtgtttcataaaagactttttcaagctaaaatttcattagaaaatcccataaaatccatcaaaatctaatttattaaacaa 29556206  T
Q  181 tccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaataaca 253  Q
    || |||||||||||||| |||||||||| |||||||        ||||||||||||||| |||||||||||||    
T  29556205 tctttcgaaatttgaatgattttgaataacactagattttttttaagtgattaagagtcttgattgaataaca 29556133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 47780911 - 47780743
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||| ||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  47780911 caatcttaagaaatctcatgttttcatgaaaaactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 47780812  T
Q  182 ccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaata 250  Q
    ||||  || ||||||| |||||||||| ||||||||       ||||||||||||||| ||||||||||    
T  47780811 ccttttaattttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaata 47780743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 31572197 - 31572327
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||||||| ||| ||||||||||||||||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  31572197 caattctaagaaatctcatgatttcatgaaagactttttcatcctaaaatttcactataaaatcccacaaaatccatcaaaatctgatttattaaacaat 31572296  T
Q  182 ccttcgaaatttgaataattttgaataccac 212  Q
    |||||||||||| ||| ||||||||||||||    
T  31572297 ccttcgaaatttaaatgattttgaataccac 31572327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 32588963 - 32589120
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    |||||||||||||| |||||||||||||| ||||||||||| || ||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  32588963 aaatctcatgttttcatgaaagacttttttatgctaaaatttcactagaaaatctcacaaaatccatcaaaatccgatttattaaacaatccttcaaaat 32589062  T
Q  192 ttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattgaat 249  Q
    |||||| |||||||||||||| ||||       ||||||| ||||||| |||||||||    
T  32589063 ttgaatgattttgaataccacaagacttcttttaagtgatgaagagtcttgattgaat 32589120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 6312767 - 6312639
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  6312767 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 6312668  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  6312667 aatttgaatgattttgaataccacaagac 6312639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 29396395 - 29396523
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29396395 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29396494  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  29396495 aatttgaatgattttgaataccacaagac 29396523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 9577432 - 9577567
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| ||||||||||||||||| |||||||| |||||||| |||||||| || ||||||||| |||||||||||||||||||  ||||||||||||||    
T  9577432 caatcccaagaaatctcatgttttcatgaaagattttttcattctaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaaacaat 9577531  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||| |||||||||| |||||||||| ||| ||||    
T  9577532 ccttctaaatttgaatgattttgaatatcacaagac 9577567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 92 - 217
Target Start/End: Complemental strand, 51701770 - 51701645
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  51701770 aaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 51701671  T
Q  192 ttgaataattttgaataccactagac 217  Q
    |||||| |||||||||||||| ||||    
T  51701670 ttgaatgattttgaataccacaagac 51701645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 48177469 - 48177597
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  48177469 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 48177568  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  48177569 aatttgaatgattttgaataccacaagac 48177597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 37014640 - 37014775
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||||   |||||| |||||||    
T  37014640 caatcttaagaaatctcatgtttttatgagagactttttcatgctaaaatttcactagaaaatccgacaaaatccatcaaaattcaatttataaaacaat 37014739  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    | || ||||||||||| |||||||||| ||| ||||    
T  37014740 ctttagaaatttgaatgattttgaatatcacaagac 37014775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 46328234 - 46328107
Alignment:
Q  90 agaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaa 189  Q
    |||||||| || |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  46328234 agaaatcttatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcgaa 46328135  T
Q  190 atttgaataattttgaataccactagac 217  Q
    |||||||| |||||||||||||| ||||    
T  46328134 atttgaatgattttgaataccacgagac 46328107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 117 - 250
Target Start/End: Complemental strand, 730314 - 730180
Alignment:
Q  117 ttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactaga 216  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||    
T  730314 ttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaattcgtcgaaatttgaatgattttgaataccactaga 730215  T
Q  217 c-nnnnnnnaagtgattaagagtcatgattgaata 250  Q
    |        ||||||||||||||| ||||||||||    
T  730214 cttttttttaagtgattaagagtcttgattgaata 730180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 25612350 - 25612222
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || |||||||  | || ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  25612350 aagaaatctcatcttttcatgaaagactttttcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 25612251  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  25612250 aatttgaatgattttgaataccacaagac 25612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 28387400 - 28387523
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||  || |||||||  | || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  28387400 aagaaatctcatctttttatgaaagacttttttttgttaaaattaaactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 28387499  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| | ||||||||||||    
T  28387500 aatttgaatgaatttgaataccac 28387523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 9322507 - 9322630
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||| |||||||||||||||   ||||||||||||||||||| |    
T  9322507 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcta 9322606  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| ||||||||||||||    
T  9322607 aatttgaatgattttgaataccac 9322630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 15835060 - 15835183
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||| ||||||||||||||||  |||||||||||||||||| |     
T  15835060 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatcctttgc 15835159  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| ||||||||||||||    
T  15835160 aatttgaatgattttgaataccac 15835183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 48524490 - 48524384
Alignment:
Q  111 aagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaatacc 210  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| |||||||||| |    
T  48524490 aagactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaaactgatttattaaacaatctttcaaaatttgaatgattttgaatatc 48524391  T
Q  211 actagac 217  Q
    || ||||    
T  48524390 acaagac 48524384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 33025703 - 33025578
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||          |||||||| |||||||||||    
T  33025703 caatcataagaaatctcatgttttcatgaaagactttttcatgctaaaattttattagaaaatcccacaa----------aatctgatgtattaaacaat 33025614  T
Q  182 ccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||| |||||||||| |||||||||||||| ||||    
T  33025613 ccttcaaaatttgaatgattttgaataccacaagac 33025578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 334
Target Start/End: Original strand, 38536155 - 38536340
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattga 247  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| ||||       |||| || || |||| |||||||    
T  38536155 acaaaatccatcaaaatccaatttattaaacaatcctttgaaatttgaataattttgaataccacaagacttttgttaagtaatgaaaagtcttgattga 38536254  T
Q  248 ataacaacaagacnnnnnnnnaaattaaaaagagtcttgattgaatacaacatgacttttttat-gataaaaagtcttttaaaatccc 334  Q
    || ||  ||| ||        |||| | |||||||||||||||||||| ||| |||||||||||  ||||||||||||||||||||||    
T  38536255 at-acctcaaaac-ttttttaaaatgacaaagagtcttgattgaataccacaagacttttttataaataaaaagtcttttaaaatccc 38536340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 334
Target Start/End: Original strand, 38558373 - 38558558
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattga 247  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| ||||       |||| || || |||| |||||||    
T  38558373 acaaaatccatcaaaatccaatttattaaacaatcctttgaaatttgaataattttgaataccacaagacttttgttaagtaatgaaaagtcttgattga 38558472  T
Q  248 ataacaacaagacnnnnnnnnaaattaaaaagagtcttgattgaatacaacatgacttttttat-gataaaaagtcttttaaaatccc 334  Q
    || ||  ||| ||        |||| | |||||||||||||||||||| ||| |||||||||||  ||||||||||||||||||||||    
T  38558473 at-acctcaaaac-ttttttaaaatgacaaagagtcttgattgaataccacaagacttttttataaataaaaagtcttttaaaatccc 38558558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 955882 - 955823
Alignment:
Q  150 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaatac 209  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  955882 aaaatccatcaaaatctgatttattaaacaacccttcgaaatttgaatgattttgaatac 955823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 48668785 - 48668905
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| || ||||||||| |||| ||||||||||||||| || ||||||| || || | ||||||||||||||||          ||||||||||||||    
T  48668785 caatcccaacaaatctcatcttttcatgaaagactttttcttgttaaaattacactacagaatcccacaaaatcca----------atttattaaacaat 48668874  T
Q  182 ccttcgaaatttgaataattttgaataccac 212  Q
    | |||||||||||||||||||||||||||||    
T  48668875 ctttcgaaatttgaataattttgaataccac 48668905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 730114 - 730045
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgataaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| |||| ||||||||||||||||||||||| |||||||    
T  730114 aaagagtcttgattgaataccacaagactttttcatgaaaaaaagtcttttaaaatcccttagaatcatg 730045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 28824599 - 28824676
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||| |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  28824599 aaattagaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 28824676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 953785 - 953715
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  953785 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 953715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 21222121 - 21222044
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||| ||||| |||||| |||||||||||||||| |||||||    
T  21222121 aaattgaaaagagtcttgattgaataccacaagactttttcatgataaaaaagccttttaaaatcccttagaatcatg 21222044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 29219420 - 29219351
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||||| |||||||||||||| ||||    
T  29219420 acaaaatccatcaaaatccaatttattaaacaatccttcttaatttgaatgattttgaataccacaagac 29219351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 35679355 - 35679432
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgataaaa-agtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||| ||||||||||||| ||| |||||||| || |||||| |||||||||||||||||||||||||||    
T  35679355 aaattgaaaagagccttgattgaataccacaagactttttcattataaaaaagtcttttaaaatcccttaaaatcatg 35679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 48524285 - 48524216
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgataaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||||||||||||||||||  ||  |||||||||||||||||||||||||||||| ||||| |||||||    
T  48524285 aaagagtcttgattgaatactgcaaaacttttttatgataaaaagtcttttaaaattccttagaatcatg 48524216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 49198494 - 49198571
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  49198494 aaattgaaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatg 49198571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 51085939 - 51085860
Alignment:
Q  138 agaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||| ||||||||| ||||||||||  ||||||| || |||||||| |||||||||| |||||||||||||| ||||    
T  51085939 agaaaattccacaaaattcatcaaaatccaatttatttaataatccttcaaaatttgaattattttgaataccacgagac 51085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 18798614 - 18798556
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  18798614 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 18798556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 19452084 - 19452154
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| | ||| ||||||||||||||||||||||| |||||||    
T  19452084 aaagagtcttgattgaataccacaagactttttcaagataaaaaagtcttttaaaatcccttagaatcatg 19452154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 22183336 - 22183266
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||| ||| |||||||    
T  22183336 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcctttagaatcatg 22183266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 35279638 - 35279568
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||| |||| |||||||    
T  35279638 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatctcttagaatcatg 35279568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 49418050 - 49417980
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||| |||| |||||||    
T  49418050 aaagagtcttgattgaatatcacatgactttttcatgataaaaaagtcttttaaaatctcttagaatcatg 49417980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 45760237 - 45760314
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| |||||||| |||||||||||| ||| |||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  45760237 aaattgaaaagagttttgattgaataccacaagactttttcatgataaaaaaatcttttaaaatcccttagaatcatg 45760314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 47654587 - 47654658
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat--aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||||||||||| |||||| ||| |||||||| |||||  ||||||||||||||||||||||| |||||||    
T  47654587 aaagagtcttgatcgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatg 47654658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 49230848 - 49230785
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||| |||||||||||| || || |||||||||||||||||||| |||||||    
T  49230848 agtcttgattgaataccacatgactttttcataattaaaaagtcttttaaaatcccataaaatc 49230785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 32589187 - 32589245
Alignment:
Q  275 aaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatc 332  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||    
T  32589187 aaaagagtcttgattgaatacaacataactttttcatgataaaaaagttttttaaaatc 32589245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 45272765 - 45272656
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| ||||||| ||||| |||||| || ||||||| || || |||||| |||||||||||          |||||||||||| |||||||||||    
T  45272765 aaatctcatctttttataaaagattttttcttgttaaaattacactacaaaatctcacaaaatcca----------atttattaaaca-tccttcgaaat 45272677  T
Q  192 ttgaataattttgaataccac 212  Q
    || ||||||||||||||||||    
T  45272676 ttaaataattttgaataccac 45272656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 47780592 - 47780515
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| ||||||||||||||||||||| ||| |||||||| ||||| ||||| |||||||||||  |||| |||||||    
T  47780592 aaattgaaaagagtcttgattgaataccacaagactttttcatgataaaaaaatcttttaaaatttcttagaatcatg 47780515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 49231000 - 49230951
Alignment:
Q  168 atttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  49231000 atttattaaataatccttcgaaatttgaatgattttgaataccacaagac 49230951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 42657793 - 42657730
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||| ||| ||||||||||| | ||||||||||||||||||| ||| |||||    
T  42657793 agtcttgattgaataccacaagacttttttataattaaaaagtcttttaaaatctcttgaaatc 42657730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 51826841 - 51826904
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||| ||| || |||||||| || |||||||||||||||||||||| |||||    
T  51826841 agtcttgattgaataccacaagatttttttattattaaaaagtcttttaaaatcccttcaaatc 51826904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 6304492 - 6304558
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatg-ataaaaagtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||||||| ||| |||||||| ||| | ||||||||||||||||||| ||| |||||||    
T  6304492 agtcttgattgaataccacaagactttttcatgaaaaaaaagtcttttaaaatcctttagaatcatg 6304558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 31622536 - 31622586
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaatac 209  Q
    ||||||| |||||||||||||||| || ||||||||||| |||||||||||    
T  31622536 caaaatccgatttattaaacaatcttttgaaatttgaatgattttgaatac 31622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 192
Target Start/End: Complemental strand, 38320098 - 38319996
Alignment:
Q  90 agaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaa 189  Q
    |||||| |||| |||| ||||||||||||||  |||||||||||  | | |||| || |||||||| |||||||||  ||||| ||||||||| ||| ||    
T  38320098 agaaatatcatattttcatgaaagacttttttgtgctaaaattcactaaaaaaacccaacaaaatctatcaaaatcctatttagtaaacaatcattcaaa 38319999  T
Q  190 att 192  Q
    |||    
T  38319998 att 38319996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 47784509 - 47784451
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||  ||||||||||||||| || ||| |||||||||||||||||||||| ||||    
T  47784509 caaaatccaatttattaaacaatctttagaagtttgaataattttgaataccacaagac 47784451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 50192785 - 50192855
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| |||||||||||||| ||| |||||||| || || ||||||||||||||||| ||||| |||||||    
T  50192785 aaagaatcttgattgaataccacaagactttttcataataaaaaagtcttttaaaattccttagaatcatg 50192855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 5495162 - 5495231
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    |||||||||  |||||||  |||||||||| ||||||| ||||||| ||| |||||||||||||| ||||    
T  5495162 acaaaatcccacaaaatccaatttattaaataatcctttgaaatttaaatgattttgaataccacgagac 5495231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 27198346 - 27198290
Alignment:
Q  284 ttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaa 339  Q
    |||||||||||| ||| ||||||||||| |  |||||||||||||||||||||||||    
T  27198346 ttgattgaataccacaagacttttttataaacaaaaagtcttttaaaatcccttaaa 27198290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 6312536 - 6312481
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  6312536 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 6312481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 8141366 - 8141421
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||||    
T  8141366 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 8141421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 9322738 - 9322793
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||||    
T  9322738 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 9322793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 15835291 - 15835346
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||||    
T  15835291 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 15835346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 19007584 - 19007647
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgataaaa-agtcttttaaaatcccttaaaatc 342  Q
    |||||||||||||||| ||  |||||||| || |||||| |||||||||||||||||| |||||    
T  19007584 agtcttgattgaataccactagactttttcattataaaaaagtcttttaaaatcccttgaaatc 19007647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 342
Target Start/End: Complemental strand, 19893526 - 19893467
Alignment:
Q  284 ttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatc 342  Q
    ||||||||||||  || || |||||||| || ||||||||||||||||||||||||||||    
T  19893526 ttgattgaatactccaagatttttttatcattaaaaagtcttttaaaatcccttaaaatc 19893467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 29556077 - 29556006
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgataaaaagtcttttaaaatcccttaaaatca 343  Q
    ||||| ||||||||||||||||||||| |||  || |||||||   ||||||||||||||||||||||| |||||    
T  29556077 aaattgaaaagagtcttgattgaataccacaaaac-tttttat--aaaaaagtcttttaaaatcccttagaatca 29556006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 31572401 - 31572467
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgataaaaa-gtcttttaaaatcccttaaaatcatg 345  Q
    ||| |||| ||||||| ||| |||||||| |||||||||| |||| ||||||||||||| |||||||    
T  31572401 agttttgaatgaataccacaagactttttcatgataaaaaagtctcttaaaatcccttagaatcatg 31572467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 5495334 - 5495387
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||| |||||||||||| || | |||||||| ||||||||||    
T  5495334 agtcttgattgaataccacatgactttttcataattaaaaagttttttaaaatc 5495387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 9577670 - 9577727
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccctt 336  Q
    |||||||||||||||| |||  ||||||| || || ||||||||||||||||||||||    
T  9577670 agtcttgattgaataccacaaaactttttcatcattaaaaagtcttttaaaatccctt 9577727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 14494175 - 14494122
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaa 328  Q
    |||||||||||||||||||| ||| || ||||| ||||| ||||||||||||||    
T  14494175 aaagagtcttgattgaataccacaagattttttcatgataaaaaagtcttttaa 14494122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 48524842 - 48524805
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttt 119  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  48524842 caatcctaacaaatctcatgttttcatgaaagactttt 48524805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 5495117 - 5495181
Alignment:
Q  93 aatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatcca 157  Q
    |||||||| |||| || || ||||||||| || ||||||| || || ||||||||||||||||||    
T  5495117 aatctcatcttttcataaaggactttttcttgttaaaattacactacaaaatcccacaaaatcca 5495181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 18798663 - 18798607
Alignment:
Q  90 agaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcc 146  Q
    ||||||||||| |||| ||||||||||||||| || ||||||| || || |||||||    
T  18798663 agaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 18798607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 29219250 - 29219198
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaat 331  Q
    |||||||||||||||| ||| |||||||| || | ||||||||||||||||||    
T  29219250 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 29219198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 29396626 - 29396678
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaat 331  Q
    |||||||||||||||| ||| |||||||| || | ||||||||||||||||||    
T  29396626 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 29396678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 45760160 - 45760192
Alignment:
Q  277 aagagtcttgattgaatacaacatgactttttt 309  Q
    ||||||||||||||||||| |||||||||||||    
T  45760160 aagagtcttgattgaataccacatgactttttt 45760192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 47780760 - 47780728
Alignment:
Q  277 aagagtcttgattgaatacaacatgactttttt 309  Q
    ||||||||||||||||||| |||||||||||||    
T  47780760 aagagtcttgattgaataccacatgactttttt 47780728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 85 - 247
Target Start/End: Complemental strand, 100415 - 100253
Alignment:
Q  85 tcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcct 184  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||| || ||||||| |||||||||||||||||||| |||||||||||||||||||    
T  100415 tcctaagaaatctcatgttttcatgaaagactttttcttgttaaaatttcactagaaaaacccacaaaatccatcaaaatttgatttattaaacaatcct 100316  T
Q  185 tcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattga 247  Q
    | ||||||||||| |||||||||||||||||||       ||||||||||||||| |||||||    
T  100315 ttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 100253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 100176 - 100114
Alignment:
Q  284 ttgattgaatacaacatgacttttttatgataaaaa-gtcttttaaaatcccttaaaatcatg 345  Q
    |||||||||||  | | |||||||| |||||||||| |||||||||||||||||| |||||||    
T  100176 ttgattgaatatcagaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatg 100114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 540 - 671
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    |||||||||||||||||||||||  | |||||||||||||| | |||||| || |||||||| ||||||||||||||||||| |||||||||||||||||    
T  540 aatcctaagaaatctcatgttttcgtcaaagactttttcataccaaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaatc 639  T
Q  183 cttcgaaatttgaataattttgaataccacta 214  Q
    |||| |||||||||| ||||||||||||||||    
T  640 cttccaaatttgaatgattttgaataccacta 671  T

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Target: scaffold1504 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 1063 - 936
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||||||||||  | ||||||| || || ||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  1063 aagaaatctcatattttaatgaaagactttttctagttaaaattacactacaaaatcccacaaaatccatcaaaatct-atttattaaataattcttcga 965  T
Q  189 aatttgaataattttgaataccactagac 217  Q
    ||||||||| |||||||||||||| ||||    
T  964 aatttgaatgattttgaataccacaagac 936  T

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Target: scaffold0543 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 10760 - 10637
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||| |||||||||||||||   |||||||||||||||||| ||    
T  10760 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatcctttga 10661  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| ||||||||||||||    
T  10660 aatttgaatgattttgaataccac 10637  T

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Target: scaffold0543; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 10529 - 10474
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccc 334  Q
    |||||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  10529 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 10474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 39624 - 39747
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  39624 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaataatccttcga 39723  T
Q  189 aatttgaataattttgaataccac 212  Q
    | ||||||| ||||||||||||||    
T  39724 agtttgaatgattttgaataccac 39747  T

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Target: scaffold0054 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 36914 - 37035
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  36914 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatgcttcga 37013  T
Q  189 aatttgaataattttgaatacc 210  Q
    ||||| ||| ||||||||||||    
T  37014 aattttaatgattttgaatacc 37035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 37057 - 37116
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    |||||||||||||||||||  ||| |||||||| || | |||||||||||||||||||||    
T  37057 aaagagtcttgattgaatagcacaagactttttcataattaaaaagtcttttaaaatccc 37116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 58083 - 58206
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| ||| || || |||||||  | || ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  58083 aagaaatctcatcttttcatgaaagattttctcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 58182  T
Q  189 aatttgaataattttgaataccac 212  Q
    ||||||||| ||||||||||||||    
T  58183 aatttgaatgattttgaataccac 58206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 58268 - 58327
Alignment:
Q  276 aaagagtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatccc 334  Q
    ||| |||||||||||||||| ||| |||||||| || | |||||||||||||||||||||    
T  58268 aaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 58327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 188
Target Start/End: Original strand, 3712 - 3798
Alignment:
Q  102 tttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||||| ||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  3712 tttttatgaaagaccttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 3798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 332
Target Start/End: Complemental strand, 14023 - 13840
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattga 247  Q
    ||||||||||||||||||  ||||||||||||||| || ||||||||||| |||||||||||||| ||||       ||||||| || |||| |||||||    
T  14023 acaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 13924  T
Q  248 ataacaacaagacnnnnnnnnaaattaaaaagagtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    || ||  ||| ||        |||| | |||||||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  13923 at-acctcaatac-ttttttaaaatgacaaagagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 13840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 332
Target Start/End: Original strand, 21304 - 21487
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacnnnnnnnaagtgattaagagtcatgattga 247  Q
    ||||||||||||||||||  ||||||||||||||| || ||||||||||| |||||||||||||| ||||       ||||||| || |||| |||||||    
T  21304 acaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 21403  T
Q  248 ataacaacaagacnnnnnnnnaaattaaaaagagtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    || ||  ||| ||        |||| | |||||||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  21404 at-acctcaatac-ttttttaaaatgacaaagagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 21487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 4337 - 4272
Alignment:
Q  152 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 217  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  4337 aatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagac 4272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 4222 - 4182
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgactttttt 309  Q
    |||||| |||||||||||||||||||| ||| |||||||||    
T  4222 aaattacaaagagtcttgattgaataccacaagactttttt 4182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 14967 - 14892
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattccattagaaaatcccacaaaatcca 157  Q
    ||||| ||||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||    
T  14967 caatcttaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca 14892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 14864 - 14811
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatga-taaaaagtcttttaaaatc 332  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||||||||    
T  14864 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 14811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 8742 - 8665
Alignment:
Q  269 aaattaaaaagagtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatcccttaaaatcatg 345  Q
    ||||| |||| |||||||||||||||| |||  ||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  8742 aaattgaaaaaagtcttgattgaataccacaatactttttcatgataaaaaaatcttttaaaatcccttagaatcatg 8665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 335
Target Start/End: Original strand, 11793 - 11849
Alignment:
Q  280 agtcttgattgaatacaacatgacttttttatgat-aaaaagtcttttaaaatccct 335  Q
    |||||||||||||||  ||| ||||||||||| || |||||||||||||||||||||    
T  11793 agtcttgattgaatatcacaagacttttttataataaaaaagtcttttaaaatccct 11849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 199974 - 199905
Alignment:
Q  140 aaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaatac 209  Q
    |||||| ||||||||| ||||||||   |||||||||||| || ||| |||||||||| ||||| |||||    
T  199974 aaaatctcacaaaatcaatcaaaattcaatttattaaacactctttcaaaatttgaatgattttaaatac 199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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