View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17755_low_78 (Length: 238)
Name: NF17755_low_78
Description: NF17755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17755_low_78 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 7946001 - 7946222
Alignment:
| Q |
1 |
gcaccagaatatgttgctactggtcaatgtacctcaaagtcagatatttatagttttggtgttgtgtttttggaaataatcagtggtaggagagtaattg |
100 |
Q |
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| T |
7946001 |
gcaccagaatatgttgctactggtcaatgtacctcaaagtcagatatttatagttttggtgttgtgtttttggaaataatcagtggtaggagagtaattg |
7946100 |
T |
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| Q |
101 |
acactgccagagatgcagaagaacaaaacttgattgattgggtatgtcgcgttaaaatatgagattcaacgatgaaaatttcattaaacttgattgattg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7946101 |
acactgccagagatgcagaagaacaaaacttgattgattgggtatgtcgcgtt-aaatatgagattcaacgatgaaaatttcattaaacttgattgattg |
7946199 |
T |
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| Q |
201 |
tagtgttgcaatataatggttgt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
7946200 |
tagtgttgcaatataatggttgt |
7946222 |
T |
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