View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17755_low_88 (Length: 223)

Name: NF17755_low_88
Description: NF17755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17755_low_88
NF17755_low_88
[»] chr1 (49 HSPs)
chr1 (20-203)||(5574264-5574448)
chr1 (20-86)||(8577507-8577574)
chr1 (20-85)||(40118720-40118786)
chr1 (19-85)||(23399993-23400060)
chr1 (20-85)||(12990474-12990540)
chr1 (20-86)||(22674711-22674778)
chr1 (20-85)||(31244738-31244804)
chr1 (20-87)||(1100215-1100283)
chr1 (20-87)||(27352628-27352696)
chr1 (21-87)||(29489365-29489432)
chr1 (20-86)||(41564885-41564952)
chr1 (28-85)||(43105105-43105163)
chr1 (22-87)||(44161779-44161845)
chr1 (20-73)||(48390082-48390136)
chr1 (28-88)||(21854477-21854538)
chr1 (20-88)||(44672035-44672104)
chr1 (20-87)||(11038260-11038328)
chr1 (28-87)||(26585186-26585246)
chr1 (20-87)||(48336444-48336511)
chr1 (20-86)||(2827715-2827782)
chr1 (20-86)||(2854965-2855032)
chr1 (20-86)||(12999827-12999894)
chr1 (21-87)||(18610771-18610838)
chr1 (20-86)||(25988989-25989056)
chr1 (28-86)||(26501294-26501353)
chr1 (20-86)||(27563483-27563550)
chr1 (20-86)||(32873340-32873407)
chr1 (21-87)||(42256458-42256525)
chr1 (20-86)||(43457824-43457891)
chr1 (20-85)||(49931553-49931620)
chr1 (20-85)||(6396327-6396393)
chr1 (20-86)||(14002747-14002813)
chr1 (20-85)||(40238438-40238504)
chr1 (58-87)||(110745-110774)
chr1 (20-87)||(4213070-4213139)
chr1 (20-76)||(11897183-11897240)
chr1 (20-61)||(29094751-29094792)
chr1 (58-87)||(36954669-36954698)
chr1 (20-87)||(37619542-37619610)
chr1 (21-85)||(37669398-37669463)
chr1 (20-65)||(48962007-48962052)
chr1 (24-87)||(578802-578866)
chr1 (20-87)||(2571633-2571700)
chr1 (20-87)||(11460789-11460860)
chr1 (20-87)||(26910430-26910498)
chr1 (21-87)||(29706708-29706776)
chr1 (20-94)||(37685321-37685397)
chr1 (20-94)||(37700121-37700197)
chr1 (20-87)||(39815344-39815412)
[»] scaffold0514 (1 HSPs)
scaffold0514 (20-85)||(1850-1916)
[»] chr8 (32 HSPs)
chr8 (20-87)||(28713091-28713159)
chr8 (20-87)||(28720438-28720506)
chr8 (20-87)||(28728080-28728148)
chr8 (20-86)||(23708975-23709042)
chr8 (20-85)||(27300346-27300412)
chr8 (23-87)||(35701835-35701900)
chr8 (20-87)||(4148660-4148728)
chr8 (20-87)||(32674237-32674305)
chr8 (28-86)||(18549978-18550037)
chr8 (28-86)||(37784387-37784446)
chr8 (20-85)||(34838275-34838341)
chr8 (28-87)||(22203228-22203288)
chr8 (20-85)||(10591878-10591944)
chr8 (20-85)||(21649173-21649239)
chr8 (20-85)||(40459767-40459833)
chr8 (28-85)||(42688427-42688485)
chr8 (20-86)||(5742662-5742729)
chr8 (28-86)||(34578390-34578449)
chr8 (20-85)||(1646256-1646322)
chr8 (21-82)||(14228710-14228772)
chr8 (20-81)||(32234457-32234519)
chr8 (20-87)||(22836144-22836212)
chr8 (28-87)||(28156201-28156261)
chr8 (28-87)||(34641543-34641603)
chr8 (20-87)||(43715873-43715941)
chr8 (20-86)||(9895009-9895074)
chr8 (21-86)||(36064029-36064095)
chr8 (21-89)||(3381731-3381800)
chr8 (20-87)||(6440079-6440148)
chr8 (28-87)||(18411308-18411368)
chr8 (24-87)||(36497659-36497723)
chr8 (24-82)||(39031220-39031280)
[»] chr5 (36 HSPs)
chr5 (20-87)||(34693221-34693289)
chr5 (20-84)||(30103456-30103521)
chr5 (20-87)||(12891101-12891169)
chr5 (20-87)||(18729294-18729362)
chr5 (20-87)||(20985534-20985602)
chr5 (28-87)||(39032617-39032677)
chr5 (20-86)||(25585461-25585528)
chr5 (28-89)||(14522977-14523039)
chr5 (20-87)||(3031832-3031900)
chr5 (20-88)||(29765827-29765896)
chr5 (20-85)||(36899486-36899551)
chr5 (20-95)||(19844313-19844390)
chr5 (28-88)||(24329995-24330056)
chr5 (20-84)||(37821130-37821195)
chr5 (21-85)||(38010872-38010937)
chr5 (20-87)||(5996665-5996733)
chr5 (20-87)||(29803223-29803291)
chr5 (20-87)||(31626081-31626149)
chr5 (32-86)||(2863549-2863604)
chr5 (21-86)||(3154649-3154715)
chr5 (21-86)||(9594477-9594543)
chr5 (21-82)||(11464128-11464190)
chr5 (20-85)||(27440479-27440545)
chr5 (28-85)||(30420626-30420684)
chr5 (21-85)||(3263514-3263579)
chr5 (21-85)||(9599734-9599799)
chr5 (20-81)||(10956466-10956526)
chr5 (20-84)||(11432625-11432690)
chr5 (21-85)||(30574383-30574448)
chr5 (28-84)||(35616812-35616869)
chr5 (22-86)||(35814452-35814517)
chr5 (28-87)||(4173137-4173197)
chr5 (20-87)||(10232497-10232565)
chr5 (21-88)||(14914369-14914437)
chr5 (20-86)||(17097806-17097874)
chr5 (20-87)||(19437255-19437323)
[»] chr2 (51 HSPs)
chr2 (20-86)||(12256900-12256967)
chr2 (20-85)||(5852474-5852540)
chr2 (20-85)||(18749368-18749434)
chr2 (20-87)||(19637227-19637295)
chr2 (20-87)||(19835820-19835888)
chr2 (20-87)||(30339991-30340059)
chr2 (28-87)||(34141440-34141500)
chr2 (20-87)||(38027620-38027688)
chr2 (20-85)||(6328667-6328733)
chr2 (20-85)||(11126463-11126530)
chr2 (28-86)||(11152712-11152771)
chr2 (20-86)||(26387864-26387931)
chr2 (20-85)||(44897626-44897692)
chr2 (20-84)||(34373006-34373071)
chr2 (20-87)||(8352833-8352901)
chr2 (20-87)||(12208440-12208508)
chr2 (20-87)||(40721769-40721837)
chr2 (20-82)||(17999749-17999812)
chr2 (28-82)||(28679131-28679186)
chr2 (20-85)||(3091741-3091807)
chr2 (20-85)||(25094352-25094418)
chr2 (20-85)||(36763529-36763594)
chr2 (20-87)||(27529527-27529595)
chr2 (20-86)||(3959893-3959960)
chr2 (21-87)||(5954489-5954556)
chr2 (21-87)||(14954605-14954672)
chr2 (21-87)||(29168723-29168790)
chr2 (20-84)||(3366027-3366095)
chr2 (45-86)||(3839409-3839451)
chr2 (21-86)||(6884909-6884975)
chr2 (20-85)||(11728126-11728192)
chr2 (20-85)||(13850189-13850255)
chr2 (20-85)||(35203754-35203820)
chr2 (20-85)||(36376854-36376920)
chr2 (21-86)||(36383461-36383527)
chr2 (20-92)||(36719146-36719220)
chr2 (21-86)||(44484662-44484728)
chr2 (20-88)||(6666017-6666086)
chr2 (28-84)||(9384376-9384433)
chr2 (21-85)||(29893610-29893675)
chr2 (20-84)||(37076658-37076723)
chr2 (20-87)||(1052501-1052569)
chr2 (28-87)||(4114434-4114494)
chr2 (59-87)||(4263897-4263925)
chr2 (20-87)||(4723564-4723632)
chr2 (20-87)||(7497996-7498064)
chr2 (20-87)||(18508076-18508144)
chr2 (21-87)||(22966784-22966852)
chr2 (46-89)||(24766148-24766192)
chr2 (28-87)||(41157014-41157074)
chr2 (20-87)||(42251925-42251993)
[»] chr7 (46 HSPs)
chr7 (20-87)||(48639388-48639456)
chr7 (20-87)||(27704433-27704501)
chr7 (20-87)||(41538480-41538548)
chr7 (20-85)||(47944982-47945049)
chr7 (20-85)||(47950412-47950479)
chr7 (20-86)||(41910190-41910257)
chr7 (22-87)||(33341132-33341198)
chr7 (20-85)||(40207805-40207871)
chr7 (20-84)||(17039158-17039223)
chr7 (20-87)||(19933862-19933926)
chr7 (20-87)||(19965001-19965065)
chr7 (20-87)||(28548226-28548294)
chr7 (20-86)||(1709283-1709350)
chr7 (20-86)||(11070227-11070294)
chr7 (20-82)||(45335865-45335928)
chr7 (20-85)||(30538626-30538692)
chr7 (20-84)||(34349032-34349097)
chr7 (20-87)||(640390-640458)
chr7 (20-86)||(39415417-39415484)
chr7 (20-86)||(4678064-4678129)
chr7 (20-85)||(11789696-11789762)
chr7 (29-86)||(35491425-35491483)
chr7 (20-85)||(37969931-37969997)
chr7 (20-84)||(23034318-23034383)
chr7 (21-85)||(33050183-33050248)
chr7 (20-87)||(4971288-4971356)
chr7 (20-87)||(5378625-5378693)
chr7 (20-87)||(16567314-16567382)
chr7 (20-87)||(16598280-16598348)
chr7 (20-87)||(48522154-48522222)
chr7 (20-90)||(2600539-2600610)
chr7 (21-87)||(37385239-37385306)
chr7 (21-87)||(42060654-42060721)
chr7 (20-84)||(23910255-23910321)
chr7 (20-85)||(28081787-28081853)
chr7 (28-85)||(29763830-29763888)
chr7 (20-85)||(41458905-41458971)
chr7 (21-85)||(2347065-2347130)
chr7 (20-84)||(35212960-35213025)
chr7 (21-85)||(44175545-44175610)
chr7 (20-87)||(47012574-47012643)
chr7 (28-87)||(30864430-30864490)
chr7 (20-87)||(31398122-31398190)
chr7 (24-87)||(32529863-32529927)
chr7 (21-84)||(37325825-37325889)
chr7 (20-75)||(47379586-47379642)
[»] chr6 (12 HSPs)
chr6 (19-86)||(34792021-34792089)
chr6 (20-85)||(27790240-27790306)
chr6 (21-87)||(3339505-3339572)
chr6 (20-85)||(6997555-6997621)
chr6 (20-86)||(23653898-23653964)
chr6 (20-88)||(7304130-7304199)
chr6 (20-87)||(8505778-8505847)
chr6 (20-87)||(8645307-8645375)
chr6 (20-87)||(15722508-15722576)
chr6 (20-87)||(19789081-19789149)
chr6 (20-89)||(26391288-26391360)
chr6 (20-87)||(32729887-32729955)
[»] chr3 (64 HSPs)
chr3 (20-87)||(29555843-29555911)
chr3 (20-85)||(48205045-48205111)
chr3 (28-86)||(7351651-7351710)
chr3 (20-85)||(14839050-14839116)
chr3 (20-85)||(30664503-30664569)
chr3 (28-85)||(55264817-55264875)
chr3 (20-87)||(9159041-9159109)
chr3 (20-83)||(38471644-38471708)
chr3 (20-87)||(45517662-45517730)
chr3 (20-87)||(50025703-50025771)
chr3 (20-82)||(17118400-17118463)
chr3 (28-86)||(42888785-42888844)
chr3 (24-85)||(38296671-38296733)
chr3 (20-86)||(41112077-41112143)
chr3 (21-92)||(11327101-11327173)
chr3 (20-87)||(16479630-16479698)
chr3 (20-87)||(33971881-33971949)
chr3 (22-85)||(47141607-47141671)
chr3 (20-89)||(288721-288792)
chr3 (20-86)||(2280176-2280243)
chr3 (20-86)||(44910696-44910763)
chr3 (20-85)||(14847523-14847589)
chr3 (24-85)||(25559704-25559766)
chr3 (21-86)||(38944147-38944213)
chr3 (23-87)||(30400164-30400229)
chr3 (20-84)||(43894990-43895055)
chr3 (20-87)||(9557927-9557995)
chr3 (28-87)||(32151886-32151946)
chr3 (20-87)||(36301213-36301281)
chr3 (20-83)||(45711444-45711508)
chr3 (24-87)||(46344412-46344476)
chr3 (20-85)||(6178430-6178496)
chr3 (21-87)||(8254025-8254092)
chr3 (21-87)||(36818954-36819021)
chr3 (20-81)||(39629843-39629906)
chr3 (20-86)||(42755654-42755721)
chr3 (42-84)||(44689793-44689836)
chr3 (20-74)||(44689817-44689869)
chr3 (26-88)||(52381179-52381242)
chr3 (20-85)||(1295332-1295398)
chr3 (20-85)||(1402650-1402716)
chr3 (28-86)||(3957829-3957887)
chr3 (20-85)||(16295464-16295530)
chr3 (20-85)||(29525233-29525299)
chr3 (21-86)||(32931924-32931990)
chr3 (24-85)||(42643235-42643297)
chr3 (28-85)||(48944723-48944781)
chr3 (20-85)||(51771444-51771510)
chr3 (20-87)||(26550235-26550304)
chr3 (20-87)||(48405408-48405477)
chr3 (28-87)||(50559224-50559285)
chr3 (20-87)||(7219-7287)
chr3 (20-87)||(7867716-7867784)
chr3 (20-87)||(9027611-9027679)
chr3 (20-86)||(19150323-19150391)
chr3 (20-87)||(20549390-20549458)
chr3 (28-87)||(27198173-27198233)
chr3 (20-82)||(32187144-32187208)
chr3 (20-83)||(33939238-33939302)
chr3 (21-84)||(40419648-40419712)
chr3 (20-87)||(49196694-49196762)
chr3 (48-87)||(49361857-49361897)
chr3 (59-87)||(53715337-53715365)
chr3 (42-85)||(54233495-54233539)
[»] chr4 (51 HSPs)
chr4 (20-89)||(35037605-35037675)
chr4 (20-85)||(36110134-36110200)
chr4 (20-87)||(50291280-50291348)
chr4 (20-86)||(51107446-51107513)
chr4 (20-86)||(53781842-53781908)
chr4 (28-85)||(55960700-55960758)
chr4 (20-87)||(29577441-29577509)
chr4 (19-86)||(31318752-31318820)
chr4 (20-87)||(55609170-55609238)
chr4 (20-86)||(4577556-4577623)
chr4 (20-87)||(18874927-18874994)
chr4 (28-86)||(29863550-29863609)
chr4 (20-86)||(46355298-46355365)
chr4 (28-86)||(48650269-48650328)
chr4 (21-87)||(53662434-53662501)
chr4 (29-86)||(54801501-54801559)
chr4 (21-85)||(3475869-3475934)
chr4 (28-87)||(4877964-4878025)
chr4 (20-61)||(32294765-32294806)
chr4 (28-84)||(38960673-38960730)
chr4 (20-85)||(52456932-52456997)
chr4 (20-88)||(54803333-54803402)
chr4 (20-87)||(5208332-5208400)
chr4 (23-90)||(7037492-7037560)
chr4 (20-87)||(26442395-26442463)
chr4 (22-85)||(35824113-35824177)
chr4 (20-87)||(37297047-37297115)
chr4 (20-86)||(1987718-1987785)
chr4 (29-86)||(1796365-1796423)
chr4 (20-85)||(18880785-18880851)
chr4 (20-62)||(18944303-18944345)
chr4 (42-87)||(23133564-23133610)
chr4 (49-87)||(33776906-33776944)
chr4 (42-83)||(43307396-43307438)
chr4 (22-87)||(49424827-49424893)
chr4 (21-86)||(52669615-52669681)
chr4 (21-85)||(4100761-4100826)
chr4 (20-61)||(8614201-8614242)
chr4 (20-65)||(28134393-28134438)
chr4 (49-89)||(31413809-31413850)
chr4 (20-91)||(40348788-40348860)
chr4 (20-87)||(50890078-50890146)
chr4 (20-87)||(56557731-56557800)
chr4 (20-87)||(22893867-22893934)
chr4 (20-87)||(22945535-22945602)
chr4 (20-87)||(36444400-36444468)
chr4 (23-86)||(40629348-40629412)
chr4 (20-87)||(41170771-41170838)
chr4 (21-87)||(42815402-42815470)
chr4 (20-87)||(44272815-44272883)
chr4 (32-87)||(53384344-53384400)
[»] scaffold0014 (1 HSPs)
scaffold0014 (20-86)||(145060-145127)
[»] scaffold0024 (1 HSPs)
scaffold0024 (20-82)||(48657-48720)
[»] scaffold0651 (1 HSPs)
scaffold0651 (19-86)||(4850-4918)
[»] scaffold0019 (1 HSPs)
scaffold0019 (21-86)||(72365-72431)
[»] scaffold0011 (1 HSPs)
scaffold0011 (21-85)||(18595-18660)
[»] scaffold0592 (1 HSPs)
scaffold0592 (20-87)||(908-976)
[»] scaffold0003 (2 HSPs)
scaffold0003 (20-85)||(366294-366360)
scaffold0003 (32-87)||(88806-88862)
[»] scaffold0098 (1 HSPs)
scaffold0098 (20-87)||(49293-49361)


Alignment Details
Target: chr1 (Bit Score: 149; Significance: 7e-79; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 5574264 - 5574448
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttgtgaatattatcttttccacttcttttttag 118  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5574264 aatgtgagtatgagagagaaggttgtacaaaagttgtacaaaaatgattgtacaaatatcatttcttttgtgaatattatcttttccacttcttttttag 5574363  T
Q  119 gtctaggaaaagttgaagctttttctgattttatctatgaagtatgaacaatcccccttcaaattatcatatgtctcggcgtatc 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  5574364 gtctaggaaaagttgaagctttttctgattttatctatgaagtatgaacaatcccccttcaaattattagatgtctcgacgtatc 5574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 8577507 - 8577574
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  8577507 aatgtaaatatgagagagaaggttgtacaaaagttatacaaaaatggttgtacaaatatcatttctct 8577574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 40118720 - 40118786
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  40118720 aatgtgagtatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttctc 40118786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 23399993 - 23400060
Alignment:
Q  19 aaatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    |||| ||| ||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||    
T  23399993 aaatatgagtatgagagagaagattgtacaaaagttgtataaaaatggttgtacaaatatcatttctc 23400060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 12990474 - 12990540
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||| |||||| |||||| ||||||||| |||||||||||||||||||||    
T  12990474 aatgtgagtatgagagagaaggttgtacgaaagttgtacaaaaatggttgtacaaatatcatttctc 12990540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 22674778 - 22674711
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||||||  |||||||||| || ||||||||| ||||||||||||||||||||||    
T  22674778 aatgtgagtatgagagagaaagttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctct 22674711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 31244738 - 31244804
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||||||||||||||||  |||||||||| || |||||||||| || |||||||||||||||||    
T  31244738 aatgtgaatatgagagagaatgttgtacaaaaattgtacaaaaatgattatacaaatatcatttctc 31244804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 1100283 - 1100215
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||| ||||||  |||||||||| || |||||||||| ||||||||||||||||||||||    
T  1100283 aatgtgagtatgatagagaaagttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctctt 1100215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 27352696 - 27352628
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| |||||||||| ||||||  |||||||||||||||||||||||    
T  27352696 aatgtgagtatgagagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcatttctctt 27352628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 29489365 - 29489432
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    |||||| ||||||||||||  |||||| |||||||| ||||||  |||||||||||||||||||||||    
T  29489365 atgtgagtatgagagagaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttctctt 29489432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 41564885 - 41564952
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||||| ||| | ||| ||| ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  41564885 aatgtgagtataaaagaaaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctct 41564952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 43105163 - 43105105
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    |||||||||||| |||||| |||| ||||||||||||  ||||||||||||||||||||    
T  43105163 tatgagagagaaaattgtataaaaattatacaaaaataattgtacaaatatcatttctc 43105105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 44161779 - 44161845
Alignment:
Q  22 tgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    |||||||||||||||||| ||||| ||||| |||||| ||||| ||| |||||||||||||| ||||    
T  44161779 tgtgaatatgagagagaaaattgtccaaaaattataccaaaatagttatacaaatatcatttatctt 44161845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 48390082 - 48390136
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaa 73  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  48390082 aatgtgagtatgagagagaagtttgtacaaaagttgtacaaaaatggttgtacaa 48390136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 21854477 - 21854538
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttg 88  Q
    ||||||||||||  ||||||||||||| ||| |||||  |||||||||||||||||||||||    
T  21854477 tatgagagagaaagttgtacaaaagttgtaccaaaataattgtacaaatatcatttctcttg 21854538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 44672035 - 44672104
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttg 88  Q
    ||||||| |||||||||||| |||||  ||||||| |  ||||||| |||||||||||||||||||||||    
T  44672035 aatgtgagtatgagagagaaaattgtcaaaaagttgttaaaaaatgattgtacaaatatcatttctcttg 44672104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 11038328 - 11038260
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||| ||||||  |||||||||| |||||| |||||| ||||| ||||||||||||||||    
T  11038328 aatgtgagtatgaaagagaaagttgtacaaaaattataccaaaatggttgtataaatatcatttctctt 11038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 26585186 - 26585246
Alignment:
Q  28 tatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||||| ||  ||||||||||||||| ||||||  |||||||||||||||||||||||    
T  26585186 tatgagagaaaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttctctt 26585246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 48336444 - 48336511
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||| ||||||||||||| ||  |||||| ||||||||||||||||| ||||    
T  48336444 aatgtgagtatgagagagaag-ttgtacaaaagttgtatcaaaatggttgtacaaatatcatttttctt 48336511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 2827715 - 2827782
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||||||  |||||||||| ||||||  || || |||||||||||||||||||||    
T  2827715 aatgtgagtatgagagagaaagttgtacaaaaattataccgaattgattgtacaaatatcatttctct 2827782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 2854965 - 2855032
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||| ||||||||||||||||| |   ||||||  ||||||||||||||||||||    
T  2854965 aatgtgagtatgagagaaaagattgtacaaaagttgtcataaaatgaatgtacaaatatcatttctct 2855032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 12999827 - 12999894
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagtt-atacaaaaatgttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||||||  |||||||||||||  || ||||  ||||||||||||||||||||||    
T  12999827 aatgtgagtatgagagagaaagttgtacaaaagttgttagaaaatggttgtacaaatatcatttctct 12999894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 18610838 - 18610771
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    |||||| ||||||||||||  ||||| ||||||| | ||||||  |||||||||||||||||||||||    
T  18610838 atgtgagtatgagagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctctt 18610771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 25988989 - 25989056
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||| |||||||||||| |||||  ||||||| |  ||||||| |||||||||||||||||||||    
T  25988989 aatgtgagtatgagagagaaaattgtctaaaagttgttaaaaaatggttgtacaaatatcatttctct 25989056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 26501353 - 26501294
Alignment:
Q  28 tatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    ||||||||||||  |||| |||||||||| ||||||  ||||||||||||||||||||||    
T  26501353 tatgagagagaaagttgtccaaaagttattacaaaatggttgtacaaatatcatttctct 26501294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 27563550 - 27563483
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||| |||||||||||| |||||  |||| |||||  |||||| |||||||||||||||||||||    
T  27563550 aatgtgagtatgagagagaaaattgtcaaaaaattatagcaaaatgattgtacaaatatcatttctct 27563483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 32873407 - 32873340
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    ||||||| ||||||| | ||||||||||||||||||| | ||||  | ||||||||||||||||||||    
T  32873407 aatgtgagtatgagataaaagattgtacaaaagttatcataaaatggatgtacaaatatcatttctct 32873340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 42256525 - 42256458
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    |||||| ||||||||||||  |||||| |||||| | ||||||  |||||||||||||||||||||||    
T  42256525 atgtgagtatgagagagaaagttgtaccaaagttgtcacaaaatggttgtacaaatatcatttctctt 42256458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 43457824 - 43457891
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    |||| |||||||||||||||  |||| ||||||||||   |||||| |||||||||||||||||||||    
T  43457824 aatgagaatatgagagagaaagttgtccaaaagttatcgcaaaatggttgtacaaatatcatttctct 43457891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 49931620 - 49931553
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||||||||||||||||  |||| ||||||||| |  ||||||| ||||||||||||||||||||    
T  49931620 aatgtgaatatgagagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctc 49931553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 6396393 - 6396327
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| ||||| ||||||  ||||||||||||| ||| ||||| ||||||| |||||||||||||    
T  6396393 aatgtgagtatgaaagagaaagttgtacaaaagttgtaccaaaatggttgtaccaatatcatttctc 6396327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 14002747 - 14002813
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatttctct 86  Q
    ||||| ||||||||| ||||  ||||| |||| ||||  ||||| ||||||||||||||||||||||    
T  14002747 aatgtaaatatgagaaagaaagttgtataaaaattatcaaaaaaggttgtacaaatatcatttctct 14002813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 40238504 - 40238438
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||||||||||||| || |||||  ||||||| |  ||||||| ||||||||||||||||||||    
T  40238504 aatgtgaatatgagagaaaaaattgtttaaaagttgtcaaaaaatgattgtacaaatatcatttctc 40238438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 87
Target Start/End: Complemental strand, 110774 - 110745
Alignment:
Q  58 caaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||||||||||||    
T  110774 caaaaatgttgtacaaatatcatttctctt 110745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 4213139 - 4213070
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| |||||||||||  ||||||| |||| |||||||||||||||||    
T  4213139 aatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctctt 4213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 11897240 - 11897183
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaata 76  Q
    ||||||| ||||||||||||  ||||||||||||| ||| ||||| ||||||||||||    
T  11897240 aatgtgagtatgagagagaaagttgtacaaaagttgtaccaaaatggttgtacaaata 11897183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 29094751 - 29094792
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaa 61  Q
    ||||||| |||||||||||||||||||| |||||| ||||||    
T  29094751 aatgtgagtatgagagagaagattgtacgaaagttgtacaaa 29094792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 87
Target Start/End: Complemental strand, 36954698 - 36954669
Alignment:
Q  58 caaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||||||||||||    
T  36954698 caaaaatgttgtacaaatatcatttctctt 36954669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 37619610 - 37619542
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| ||||||||||| |||||||| |||| |||||||||||||||||    
T  37619610 aatgtgagtatgagagagaaagttgtcacaaaagttat-caaaaatggttgtccaaatatcatttctctt 37619542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 37669463 - 37669398
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    |||||||||||||||||||  ||||  ||||||| ||  |||||| ||||||||||||||||||||    
T  37669463 atgtgaatatgagagagaaatttgttaaaaagttgtatcaaaatgattgtacaaatatcatttctc 37669398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 48962052 - 48962007
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg 65  Q
    ||||||| ||||||||||||| ||||||||||||| ||| ||||||    
T  48962052 aatgtgagtatgagagagaaggttgtacaaaagttgtactaaaatg 48962007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 578866 - 578802
Alignment:
Q  24 tgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||  |||| |||||||| ||| ||||| ||| |||||||||| ||||||||    
T  578866 tgaatatgagagagaaagttgtccaaaagttgtaccaaaatggttatacaaatatcctttctctt 578802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 2571700 - 2571633
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||| |||| ||||||||| || ||||  ||||| |||||||||||||||||    
T  2571700 aatgtgactatgagagagaag-ttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctctt 2571633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 11460860 - 11460789
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaa--atg-ttgtacaaatatcatttctctt 87  Q
    ||||||||||| |||||||| |||||  ||||||||| ||||||  ||| ||||||||||||||||||||||    
T  11460860 aatgtgaatataagagagaaaattgtgtaaaagttatcacaaaataatgattgtacaaatatcatttctctt 11460789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 26910498 - 26910430
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||| ||||||||||||||  | ||| ||||||| | | |||||| ||||||||||||||||||||||    
T  26910498 aatgtaaatatgagagagaaagtggtagaaaagttgtgccaaaatggttgtacaaatatcatttctctt 26910430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 29706708 - 29706776
Alignment:
Q  21 atgtgaatatgagagagaagattgta-caaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    |||||| ||||||||||||| || || ||||||||||   |||||| ||||||||||||||||||||||    
T  29706708 atgtgagtatgagagagaaggttataacaaaagttatcataaaatggttgtacaaatatcatttctctt 29706776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 37685397 - 37685321
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctc-ttgtgaata 94  Q
    ||||||| ||||||||||||  |||| ||||||||| || ||||  ||||| ||||||||||||||| |||||||||    
T  37685397 aatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctcattgtgaata 37685321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 37700121 - 37700197
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctc-ttgtgaata 94  Q
    ||||||| ||||||||||||  |||| ||||||||| || ||||  ||||| ||||||||||||||| |||||||||    
T  37700121 aatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctcattgtgaata 37700197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 39815412 - 39815344
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| |||||||| ||  |||||| |||||||||||| |||||||||    
T  39815412 aatgtgagtatgagagagaaagttgtccaaaagttgtagcaaaatggttgtacaaatataatttctctt 39815344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 1850 - 1916
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1850 aatgtgagtatgagagagaagattgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 1916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 28713159 - 28713091
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  28713159 aatgtgaatatgagagagaaggttgtataaaagttatacaaaaatggttgtacaaatatcatttctctt 28713091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 28720506 - 28720438
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  28720506 aatgtgaatatgagagagaaggttgtataaaagttatacaaaaatggttgtacaaatatcatttctctt 28720438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 28728148 - 28728080
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  28728148 aatgtgaatatgagagagaaggttgtataaaagttatacaaaaatggttgtacaaatatcatttctctt 28728080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 23709042 - 23708975
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  23709042 aatgtgagtatgagatagaaggttgtacaaaagttatacaaaaatggttgtacaaatatcatttctct 23708975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 27300412 - 27300346
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||||    
T  27300412 aatgtgaatatgagagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 27300346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 35701835 - 35701900
Alignment:
Q  23 gtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    |||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  35701835 gtgagtatgagagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 35701900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 4148660 - 4148728
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  4148660 aatgtgagtatgagagagaatattgtacaaaagttgtacaaaaatggttatacaaatatcatttctctt 4148728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 32674237 - 32674305
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  32674237 aatgtgagtatgagagagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttctctt 32674305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 18550037 - 18549978
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  18550037 tatgagagagaatgttgtacaaaagttatacaaaaatgattgtacaaatatcatttctct 18549978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 37784387 - 37784446
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    |||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  37784387 tatgagagagaaaattgtacaaaagttataccaaaatggttgtacaaatatcatttctct 37784446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 34838275 - 34838341
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| | | |||||||||||||||||||    
T  34838275 aatgtgagtatgagagagaagattgtacaaaagttgtacaaaattggatgtacaaatatcatttctc 34838341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 22203228 - 22203288
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||| || |||||||||||||| ||||||||| |||||||||||||||||||||||    
T  22203228 tatgagagaaaatattgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 22203288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 10591878 - 10591944
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||||||| | ||||||  |||||||||||||||| |||||| |||||||||||||||||||||    
T  10591878 aatgtgaatataaaagagaaagttgtacaaaagttatataaaaatagttgtacaaatatcatttctc 10591944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 21649173 - 21649239
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| ||||| ||||||  ||||||||||||| ||||||||| |||||||||||||||||||||    
T  21649173 aatgtgagtatgaaagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 21649239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 40459767 - 40459833
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||  ||||||||||||||||| ||||| ||||||||||| |||||||||    
T  40459767 aatgtgagtatgagagagaaagttgtacaaaagttataccaaaatagttgtacaaatttcatttctc 40459833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 42688485 - 42688427
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    |||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||||    
T  42688485 tatgagagagaaaattatacaaaagttatacaaaaatgattgtacaaatatcaattctc 42688427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 5742662 - 5742729
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||| ||  ||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  5742662 aatgtgagtatgagagataaagttgtacaaaagttgtaccaaaatggttgtacaaatatcatttctct 5742729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 34578390 - 34578449
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||||| || ||||| |||||||| |||||||||| |||||||||||||||||||||    
T  34578390 tatgagagataaaattgttcaaaagttgtacaaaaatggttgtacaaatatcatttctct 34578449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 1646322 - 1646256
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||||||||||||| ||  ||||| |||| | |||||||||| |||||||||||||||||||||    
T  1646322 aatgtgaatatgagagataaagttgtataaaaatgatacaaaaatagttgtacaaatatcatttctc 1646256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 14228772 - 14228710
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcattt 82  Q
    |||||| ||||||||||||  ||||||||||||||| ||||||  ||||||||||||||||||    
T  14228772 atgtgagtatgagagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcattt 14228710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 32234457 - 32234519
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatt 81  Q
    ||||||||||||| |||||| |||||| |||| ||||| |||||| |||||||||||||||||    
T  32234457 aatgtgaatatgaaagagaaaattgtataaaaattatataaaaatagttgtacaaatatcatt 32234519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 22836144 - 22836212
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||||||||| || ||  |||||| ||||||||||||||||||||||    
T  22836144 aatgtgagtatgagagagaaagttgtacaaaatttgtatgaaaatggttgtacaaatatcatttctctt 22836212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 28156261 - 28156201
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||||||||  |||||||||| || ||| |||||| ||||||||||||||||||||||    
T  28156261 tatgagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctctt 28156201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 34641603 - 34641543
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||||||||  ||| |||||| ||||| ||||||| ||||||||||||||||||||||    
T  34641603 tatgagagagaaagttgcacaaaaattatataaaaatggttgtacaaatatcatttctctt 34641543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 43715941 - 43715873
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| ||||||||| || ||||  |||||||||||||||||||||||    
T  43715941 aatgtgagtatgagagagaaagttgtcacaaaagttttagaaaatggttgtacaaatatcatttctctt 43715873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 9895074 - 9895009
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatttctct 86  Q
    ||||| ||||||| |||||| |||||| |||| ||||  ||||| ||||||||||||||||||||||    
T  9895074 aatgtaaatatgaaagagaaaattgtataaaaattattaaaaaa-gttgtacaaatatcatttctct 9895009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 36064095 - 36064029
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    |||||| |||||||||||| ||||| |||||||| | ||||||   |||||||||||||||||||||    
T  36064095 atgtgagtatgagagagaaaattgtccaaaagttgtcacaaaatgattgtacaaatatcatttctct 36064029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 3381731 - 3381800
Alignment:
Q  21 atgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctcttgt 89  Q
    |||||| ||||||||||||| || | ||||||| |||  ||||  |||||||||||||||||||||||||    
T  3381731 atgtgagtatgagagagaaggttatcacaaaagctatcaaaaacggttgtacaaatatcatttctcttgt 3381800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 6440148 - 6440079
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| ||||||||| || | |||| |||||||||||||||||||||||    
T  6440148 aatgtgagtatgagagagaaagttgtcacaaaagttgtaaagaaatagttgtacaaatatcatttctctt 6440079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 18411308 - 18411368
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||| ||  ||||||||||||| ||| ||||| |||||||||||||||||| ||||    
T  18411308 tatgagagataaatttgtacaaaagttgtaccaaaattgttgtacaaatatcatttatctt 18411368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 36497723 - 36497659
Alignment:
Q  24 tgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||  ||||  ||||||| | ||||||  |||||||||||||||||||||||    
T  36497723 tgaatatgagagagaaagttgtctaaaagttgtcacaaaatagttgtacaaatatcatttctctt 36497659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 39031220 - 39031280
Alignment:
Q  24 tgaatatgagagagaagattg-tacaaaagttatacaaaaat-gttgtacaaatatcattt 82  Q
    |||||||||||||||| |||| | ||||||||||| ||||||  |||||||||||||||||    
T  39031220 tgaatatgagagagaaaattgtttcaaaagttataaaaaaataattgtacaaatatcattt 39031280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 34693221 - 34693289
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  34693221 aatgtgagtatgagagagaagattgtacaaaaattatacaaaaatgattgtacaaatatcatttctctt 34693289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 30103456 - 30103521
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttct 84  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  30103456 aatgtgaatatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttct 30103521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 12891101 - 12891169
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||  ||||||||||||| | ||||||| |||||||||||||||||||||||    
T  12891101 aatgtgaatatgagagagaatgttgtacaaaagttgtgcaaaaatggttgtacaaatatcatttctctt 12891169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 18729294 - 18729362
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||| ||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  18729294 aatgtgagtatgaaagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 18729362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 20985534 - 20985602
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||||||    
T  20985534 aatgtgagtatgagagagaaagttgtacaaaaattatacaaaaatggttgtacaaatatcatttctctt 20985602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 39032617 - 39032677
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  39032617 tatgagagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 39032677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 25585461 - 25585528
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  25585461 aatgtgagtatgagagagaaatttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctct 25585528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 14522977 - 14523039
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctcttgt 89  Q
    |||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||||||||    
T  14522977 tatgagagagaaaattgtaaaaaagttgtacaaaaatggttgtacaaatatcatttctcttgt 14523039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 3031900 - 3031832
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||| ||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  3031900 aatgtgagtatgaaagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 3031832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 29765896 - 29765827
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttg 88  Q
    ||||||| | ||||||||||  ||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  29765896 aatgtgagtgtgagagagaaagttgtacaaaagttgtactaaaatggttgtacaaatatcatttctcttg 29765827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 36899486 - 36899551
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||  |||| ||||||||||||||    
T  36899486 aatgtgagtatgagagagaaggttgtacaaaa-ttatacaaaaatgactgtataaatatcatttctc 36899551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 19844313 - 19844390
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaat-gttgtacaaatatcatttctcttgtgaatat 95  Q
    |||||| |||||||||||||  || | |||||||||||  |||||| ||||||||||||||||||||||| |||||||    
T  19844313 aatgtggatatgagagagaaagttatcacaaaagttatcaaaaaatagttgtacaaatatcatttctcttttgaatat 19844390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 24329995 - 24330056
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttg 88  Q
    ||||||||||||  ||||||||||||| ||| |||||  |||||||||||||||||||||||    
T  24329995 tatgagagagaaagttgtacaaaagttgtaccaaaataattgtacaaatatcatttctcttg 24330056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 37821130 - 37821195
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttct 84  Q
    ||||||| ||| ||||||||| ||||||||||||| || |||||| ||||||| ||||||||||||    
T  37821130 aatgtgagtataagagagaaggttgtacaaaagttgtataaaaatggttgtacgaatatcatttct 37821195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 38010937 - 38010872
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    |||||| |||||||||||| |||||||||||||||| |||||    ||||||||||||||||||||    
T  38010937 atgtgagtatgagagagaaaattgtacaaaagttatcacaaattgattgtacaaatatcatttctc 38010872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 5996733 - 5996665
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    |||||||||||||||||||| |||||  |||| || |  |||||| |||||||||||||||||||||||    
T  5996733 aatgtgaatatgagagagaaaattgtctaaaaattgttaaaaaatagttgtacaaatatcatttctctt 5996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 29803291 - 29803223
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||  ||||  ||||||| |  |||||| |||||||||||||||||||||||    
T  29803291 aatgtgaatatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctctt 29803223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 31626081 - 31626149
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||| | ||  |||||||||| |||||| |||||| ||||||||||||||||||||||    
T  31626081 aatgtgagtatgagataaaaagttgtacaaaaattataccaaaatgattgtacaaatatcatttctctt 31626149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 2863604 - 2863549
Alignment:
Q  32 agagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    |||||||| ||||||||||||||||| |||||| ||||| ||||||||| ||||||    
T  2863604 agagagaaaattgtacaaaagttatataaaaatggttgttcaaatatcaattctct 2863549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 3154649 - 3154715
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    |||||| ||||||||||||  ||||||||||||||| | ||||  ||||||||||||||||| ||||    
T  3154649 atgtgattatgagagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcattactct 3154715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 9594543 - 9594477
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    |||||| ||||||||||||  ||||||||||||| | |||||   ||||||||||||||||||||||    
T  9594543 atgtgagtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctct 9594477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 11464128 - 11464190
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcattt 82  Q
    |||||| ||||||| |||| |||||||||||||||| |||||   ||||||||||||||||||    
T  11464128 atgtgagtatgagaaagaaaattgtacaaaagttatcacaaattggttgtacaaatatcattt 11464190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 27440545 - 27440479
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| |||||||||||| ||||| |||||||| | ||||||   ||||||||||||||||||||    
T  27440545 aatgtgagtatgagagagaaaattgttcaaaagttgtcacaaaatgattgtacaaatatcatttctc 27440479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 30420684 - 30420626
Alignment:
Q  28 tatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    |||||||||||||||||||||||| |||| | ||||  | |||||||||||||||||||    
T  30420684 tatgagagagaagattgtacaaaaattatcataaaatggatgtacaaatatcatttctc 30420626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 3263514 - 3263579
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    |||||| ||||||||| || |||||||||||||| | |||||   |||||||||||||||||||||    
T  3263514 atgtgagtatgagagaaaaaattgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 3263579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 9599734 - 9599799
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    |||||| ||||||||||||  ||||||||||||| | |||||   |||||||||||||||||||||    
T  9599734 atgtgagtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 9599799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 10956466 - 10956526
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatt 81  Q
    |||||||||||| ||||||| |||||| |||| |||| |||||| |||||| ||||||||||    
T  10956466 aatgtgaatatgtgagagaaaattgtataaaaattat-caaaaaagttgtaaaaatatcatt 10956526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 11432690 - 11432625
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttct 84  Q
    ||||||||||| ||| ||||  |||| ||||| ||||||||||||| |||||||| ||||||||||    
T  11432690 aatgtgaatataagatagaaagttgtccaaaaattatacaaaaatgattgtacaactatcatttct 11432625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 30574383 - 30574448
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    |||||| ||||||||||||  ||||||||||||| | |||||   |||||||||||||||||||||    
T  30574383 atgtgagtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 30574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 35616812 - 35616869
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttct 84  Q
    ||||||||||||  ||||| ||||||||||| ||||| ||||| ||||||||||||||    
T  35616812 tatgagagagaaagttgtataaaagttataccaaaatagttgtgcaaatatcatttct 35616869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 35814517 - 35814452
Alignment:
Q  22 tgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    ||||| ||||||| ||||  |||||| |||||||| ||||||  ||||||||||||||||||||||    
T  35814517 tgtgagtatgagaaagaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttctct 35814452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 4173137 - 4173197
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||||||||  ||||||| |||||||| ||||||| ||||||||||||  ||||||||    
T  4173137 tatgagagagaaagttgtacataagttatataaaaatgattgtacaaatattttttctctt 4173197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 10232565 - 10232497
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||  ||||  ||| ||||| |||||  || |||||||||||||||||||||    
T  10232565 aatgtgaatatgagagagaaagttgtcaaaaggttatcacaaagttgatgtacaaatatcatttctctt 10232497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 14914437 - 14914369
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctcttg 88  Q
    |||||||||||  ||||||  |||| |||||||| | ||||||  ||||||||||||||||||||||||    
T  14914437 atgtgaatatgtaagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttctcttg 14914369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 17097806 - 17097874
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||| ||||||| |||| ||||| |||||||||||  ||||||| |||| ||||||||||||||||    
T  17097806 aatgtgagtatgagatagaaaattgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctct 17097874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 19437323 - 19437255
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||  ||||  ||| ||||| ||||||  ||||||||| |||||||||||||    
T  19437323 aatgtgaatatgagagagaaagttgtttaaaggttatcacaaaatggttgtacaagtatcatttctctt 19437255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 12256967 - 12256900
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  12256967 aatgtgagtatgagagagaaggttgtacaaaagttatacaaaaatgattgtacaaatatcatttctct 12256900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 5852540 - 5852474
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  5852540 aatgtgagtatgagagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 5852474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 18749368 - 18749434
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  18749368 aatgtgagtatgagagagaaggttgtacaaaaattatacaaaaatggttgtacaaatatcatttctc 18749434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 19637295 - 19637227
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19637295 aatgtgagtatgaaagagaaagttgtacaaaagttatacaaaaatggttgtacaaatatcatttctctt 19637227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 19835888 - 19835820
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19835888 aatgtgagtatgaaagagaaagttgtacaaaagttatacaaaaatggttgtacaaatatcatttctctt 19835820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 30340059 - 30339991
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  30340059 aatgtgagtatgagagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 30339991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 34141500 - 34141440
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  34141500 tatgagagagaaggttgtacaaaagttgtacaaaaatgattgtacaaatatcatttctctt 34141440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 38027620 - 38027688
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||||| ||||    
T  38027620 aatgtgaatatgagagagaaggttgtacaaaagttgtacaaaaatgattgtacaagtatcatttttctt 38027688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 6328733 - 6328667
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||||||||||||||||  |||||||||| |||||| ||||| |||||||||||||||||||||    
T  6328733 aatgtgaatatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttctc 6328667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 11126530 - 11126463
Alignment:
Q  20 aatgtgaatatgagagagaa-gattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||| |||||||||||| | ||||||||||||||| |||||||| ||||||||||||||||||||    
T  11126530 aatgtgagtatgagagagaaagtttgtacaaaagttatgcaaaaatggttgtacaaatatcatttctc 11126463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 11152712 - 11152771
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||||||||| |||||||||| ||||| ||||||| |||||||||||||||||||||    
T  11152712 tatgagagagaaggttgtacaaaaattatataaaaatgattgtacaaatatcatttctct 11152771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 26387864 - 26387931
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||||||| |||||| |||||| ||||| ||| ||||||||||||||||||||||    
T  26387864 aatgtgagtatgagagagaaggttgtacgaaagttgtacaagaatggttgtacaaatatcatttctct 26387931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 44897692 - 44897626
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||| || |||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||    
T  44897692 aatgtgagtacgagagagaaggttgtacgaaagttgtacaaaaatggttgtacaaatatcatttctc 44897626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 34373071 - 34373006
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttct 84  Q
    ||||||| ||||||||||||  |||||||||| |||||| ||||| ||||||||||||||||||||    
T  34373071 aatgtgagtatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttct 34373006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 8352901 - 8352833
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| |||||||||||| |||||  |||||||||  |||||| |||||||||||||||||||||||    
T  8352901 aatgtgagtatgagagagaaaattgtctaaaagttattaaaaaatagttgtacaaatatcatttctctt 8352833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 12208508 - 12208440
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||| ||||||  || |||||||||| |||||||||| ||||||||||||||||||||||    
T  12208508 aatgtgagtatgaaagagaaagttatacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 12208440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 40721837 - 40721769
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||||||||||| ||| ||||| | |||||||||||||||||||||    
T  40721837 aatgtgagtatgagagagaaagttgtacaaaagttgtaccaaaatggctgtacaaatatcatttctctt 40721769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 17999812 - 17999749
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcattt 82  Q
    ||||||| ||||||||||||  ||||||||||||| |||| |||| ||||||||||||||||||    
T  17999812 aatgtgagtatgagagagaaagttgtacaaaagttgtacacaaatggttgtacaaatatcattt 17999749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 28679186 - 28679131
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcattt 82  Q
    ||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||    
T  28679186 tatgagagagaatgttgtacaaaagttgtacaaaaatgattgtacaaatatcattt 28679131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 3091807 - 3091741
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| |||||||||||| |||||  ||||||||| ||||||  |||||||||||||||||||||    
T  3091807 aatgtgagtatgagagagaaaattgtcaaaaagttatcacaaaatagttgtacaaatatcatttctc 3091741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 25094418 - 25094352
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||||||||||||||||  |||||||||| || ||| ||||| ||| |||||||||||||||||    
T  25094418 aatgtgaatatgagagagaaagttgtacaaaaattgtaccaaaatggttatacaaatatcatttctc 25094352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 36763529 - 36763594
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| ||||| ||||||  ||||| |||||||||  ||||| |||||||||||||||||||||    
T  36763529 aatgtgagtatgaaagagaaagttgtataaaagttatcaaaaaaagttgtacaaatatcatttctc 36763594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 27529595 - 27529527
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||| | ||||||  ||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  27529595 aatgtgagtataatagagaaagttgtacaaaagttgtacaaaaatggttctacaaatatcatttctctt 27529527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 3959960 - 3959893
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    ||||||| |||||||||||| |||||  ||||||| | | ||||| ||||||||||||||||||||||    
T  3959960 aatgtgagtatgagagagaaaattgtgtaaaagttgtcaaaaaaaggttgtacaaatatcatttctct 3959893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 5954489 - 5954556
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||||| |||||||||  |||| |||||||||| ||| ||  |||||||||||||||||||||||    
T  5954489 atgtgaataggagagagaaagttgtccaaaagttatcacataatggttgtacaaatatcatttctctt 5954556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 14954605 - 14954672
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttatacaaaaatgt-tgtacaaatatcatttctctt 87  Q
    |||||||||||||||||||  |||| |||||||| |   ||||||| |||||||||||||||||||||    
T  14954605 atgtgaatatgagagagaaagttgttcaaaagttgtcacaaaatgtatgtacaaatatcatttctctt 14954672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 29168790 - 29168723
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    |||||| ||||||||||||  |||| |||||||| |  ||||||| ||||||||||||||||||||||    
T  29168790 atgtgagtatgagagagaaagttgtgcaaaagttgtcaaaaaatggttgtacaaatatcatttctctt 29168723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 3366095 - 3366027
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagtta---tacaaaaat-gttgtacaaatatcatttct 84  Q
    ||||||| ||||||| |||| ||||||||||| |||   ||||||||| ||||||||||||||||||||    
T  3366095 aatgtgagtatgagaaagaaaattgtacaaaaattatactacaaaaatggttgtacaaatatcatttct 3366027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 3839451 - 3839409
Alignment:
Q  45 tacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  3839451 tacaaaagttataccaaaatggttgtacaaatatcatttctct 3839409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 6884975 - 6884909
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    |||||| ||||||||||||  ||||| ||||||||| |||||   ||||||||||||||||||||||    
T  6884975 atgtgagtatgagagagaaagttgtataaaagttatcacaaattagttgtacaaatatcatttctct 6884909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 11728126 - 11728192
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| ||||| ||||||  ||||||||||||| ||| ||||| |||||||||| ||||||||||    
T  11728126 aatgtgagtatgaaagagaaagttgtacaaaagttgtaccaaaatggttgtacaaacatcatttctc 11728192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 13850189 - 13850255
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||  |||||||||| |||||  |||||| ||||| ||||||||||||||    
T  13850189 aatgtgagtatgagagagaaagttgtacaaaaattatatcaaaatgattgtataaatatcatttctc 13850255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 35203754 - 35203820
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||| ||||| | ||||  |||||||||||||  ||||||||| ||||||||||||||||||||    
T  35203754 aatgtgagtatgaaaaagaaagttgtacaaaagttgaacaaaaatggttgtacaaatatcatttctc 35203820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 36376854 - 36376920
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||||||||||||||||  ||||  ||| ||| ||||||| || ||||||||||||||||||||    
T  36376854 aatgtgaatatgagagagaaagttgtcaaaatgttgtacaaaagtggttgtacaaatatcatttctc 36376920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 36383527 - 36383461
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    |||||| ||||||||||||  ||||||||||||| | ||||||   |||||||||||||||||||||    
T  36383527 atgtgagtatgagagagaaagttgtacaaaagttgtcacaaaatctttgtacaaatatcatttctct 36383461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 36719220 - 36719146
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaa-tatcatttctcttgtgaa 92  Q
    ||||||| ||||||||||||  |||| ||||| |||||| ||||| |||||||||| ||||||||||||| ||||    
T  36719220 aatgtgagtatgagagagaaagttgttcaaaatttataccaaaatagttgtacaaagtatcatttctcttttgaa 36719146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 44484662 - 44484728
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    |||||| ||||||||||||  |||||||||| || | ||||||  ||||||||||||||||||||||    
T  44484662 atgtgagtatgagagagaaagttgtacaaaaattgttacaaaatggttgtacaaatatcatttctct 44484728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 6666086 - 6666017
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttg 88  Q
    ||||||| ||||||||||||  | ||| ||||||| ||  |||||| |||||||||||||||||||||||    
T  6666086 aatgtgagtatgagagagaaagtcgtaaaaaagttgtaataaaatggttgtacaaatatcatttctcttg 6666017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 9384433 - 9384376
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttct 84  Q
    ||||||||||||  |||||||||| ||||  |||||| ||||||||||||||||||||    
T  9384433 tatgagagagaaagttgtacaaaaattatgtaaaaatagttgtacaaatatcatttct 9384376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 29893675 - 29893610
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    |||||| ||| ||||||||  ||||||||||||||| |||||   |||||||||||||||||||||    
T  29893675 atgtgagtataagagagaaagttgtacaaaagttatcacaaattagttgtacaaatatcatttctc 29893610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 37076723 - 37076658
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttct 84  Q
    ||||||||||| | |||||| ||| ||||||| ||||| ||||||  |||||||||||||||||||    
T  37076723 aatgtgaatataaaagagaaaattatacaaaaattatataaaaataattgtacaaatatcatttct 37076658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 1052501 - 1052569
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||| ||  ||||  ||||||| |  ||||||| ||||||||||||||||||||||    
T  1052501 aatgtgaatatgagagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctctt 1052569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 4114434 - 4114494
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||||||||  || |||||||||||||  |||||| |||||||||||| |||||||||    
T  4114434 tatgagagagaaagttatacaaaagttataataaaatggttgtacaaatataatttctctt 4114494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 4263897 - 4263925
Alignment:
Q  59 aaaaatgttgtacaaatatcatttctctt 87  Q
    |||||||||||||||||||||||||||||    
T  4263897 aaaaatgttgtacaaatatcatttctctt 4263925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 4723632 - 4723564
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||| ||||||| |  ||||||| ||||||| ||||||||||||||    
T  4723632 aatgtgagtatgagagagaaagttgtaaaaaagttgttaaaaaatggttgtacatatatcatttctctt 4723564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 7497996 - 7498064
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||  ||||||| ||  |||||| ||||||||||||||||||||||    
T  7497996 aatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctctt 7498064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 18508144 - 18508076
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgt-tgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  || ||||||||||||   ||||||  |||||||||||||||||||||    
T  18508144 aatgtgagtatgagagagaatgttatacaaaagttatcataaaatggatgtacaaatatcatttctctt 18508076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 22966852 - 22966784
Alignment:
Q  21 atgtgaatatgagagagaagattgta-caaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    |||||||||||||||||| | ||||  ||||||||||  |||| || ||||||||||||||||||||||    
T  22966852 atgtgaatatgagagagagggttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttctctt 22966784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 24766192 - 24766148
Alignment:
Q  46 acaaaagttatacaaaaatg-ttgtacaaatatcatttctcttgt 89  Q
    |||||||||||  ||||||| ||||||||||||||||||||||||    
T  24766192 acaaaagttattaaaaaatggttgtacaaatatcatttctcttgt 24766148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 41157014 - 41157074
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||||||||  |||||||||  ||||||||||||| || |||||||||||||| ||||    
T  41157014 tatgagagagaaagttgtacaaatattatacaaaaatgattatacaaatatcatttttctt 41157074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 42251925 - 42251993
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||  || |  ||||||| ||| ||| || ||||||||||||||||||||||    
T  42251925 aatgtgaatatgagagagaaagttatcaaaaagttgtactaaagtgattgtacaaatatcatttctctt 42251993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 48639388 - 48639456
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  48639388 aatgtgagtatgagagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 48639456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 27704501 - 27704433
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||| ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  27704501 aatgtgagtatgagatagaaggttgtacaaaagttgtacaaaaatagttgtacaaatatcatttctctt 27704433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 41538548 - 41538480
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||| |||||||||| || ||||||||| |||||||||||||||||||||||    
T  41538548 aatgtgagtatgagagagaaggttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctctt 41538480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 47945049 - 47944982
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg--ttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||    
T  47945049 aatgtgagtatgagagagaaggttgtacaaaagttgtacaaaaatggtttgtacaaatatcatttctc 47944982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 47950479 - 47950412
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg--ttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||    
T  47950479 aatgtgagtatgagagagaaggttgtacaaaagttgtacaaaaatggtttgtacaaatatcatttctc 47950412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 41910190 - 41910257
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  41910190 aatgtgagtatgagagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcattactct 41910257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 33341132 - 33341198
Alignment:
Q  22 tgtgaatatgagagagaagattgtacaaaagttatac-aaaaatgttgtacaaatatcatttctctt 87  Q
    ||||| ||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  33341132 tgtgagtatgaaagagaaaattgtacaaaagttatactaaaattgttgtacaaatatcatttctctt 33341198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 40207805 - 40207871
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||||||||||| |||| ||| |||||||||| ||||||||| |||||||||||||||||||||    
T  40207805 aatgtgaatatgagaaagaaaattatacaaaagttgtacaaaaatagttgtacaaatatcatttctc 40207871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 17039223 - 17039158
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttct 84  Q
    ||||||| ||||||||||||  |||||||||| |||||||||||| ||||||||||||||||||||    
T  17039223 aatgtgagtatgagagagaaagttgtacaaaaattatacaaaaatagttgtacaaatatcatttct 17039158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 19933926 - 19933862
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||   |||| ||||||||||||||||    
T  19933926 aatgtgagtatgagagagaagattgtataaaagttatacaaaaa---tgtataaatatcatttctctt 19933862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 19965065 - 19965001
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||   |||| ||||||||||||||||    
T  19965065 aatgtgagtatgagagagaagattgtataaaagttatacaaaaa---tgtataaatatcatttctctt 19965001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 28548226 - 28548294
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  28548226 aatgtgagtatgagagagaaagttgtacaaaagttgtaccaaaatagttgtacaaatatcatttctctt 28548294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 1709350 - 1709283
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||| |||||||||||| ||||||||||| || |||||||||| ||||||| |||||||||||||    
T  1709350 aatgtgagtatgagagagaatattgtacaaaaattgtacaaaaatgattgtacagatatcatttctct 1709283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 11070294 - 11070227
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||||| ||||| ||||||  ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  11070294 aatgtgagtatgatagagaaagttgtacaaaagttatactaaaatggttgtacaaatatcatttctct 11070227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 45335928 - 45335865
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcattt 82  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||| ||||||||||||||||||    
T  45335928 aatgtgagtatgagagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 45335865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 30538692 - 30538626
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttata-caaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||  ||||||||||||| || ||||| ||||||||||||||||||||||    
T  30538692 aatgtgagtatgagagagaaagttgtacaaaagttgtaccaaaattgttgtacaaatatcatttctc 30538626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 34349032 - 34349097
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttct 84  Q
    ||||||| |||||||||||| |||||  ||||||| ||||||||| ||||||||||||||||||||    
T  34349032 aatgtgagtatgagagagaaaattgtcaaaaagttgtacaaaaatggttgtacaaatatcatttct 34349097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 640458 - 640390
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||||||||| || ||||||||| |||||||||||||||||| ||||    
T  640458 aatgtgagtatgagagagaaagttgtacaaaaattgtacaaaaatggttgtacaaatatcatttttctt 640390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 39415484 - 39415417
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaa-tgttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||||||  ||||||| |||||| ||||||| ||||||||||||| |||||||||    
T  39415484 aatgtgagtatgagagagaaagttgtacataagttaaacaaaaattgttgtacaaataacatttctct 39415417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 4678129 - 4678064
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatttctct 86  Q
    ||||||| |||||||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||    
T  4678129 aatgtgagtatgagagagaaaattgtctaaaagttgt-caaaaaagttgtacaaatatcatttctct 4678064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 11789696 - 11789762
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||| ||  ||||||||||||| ||| ||||| |||||||||||||||||||||    
T  11789696 aatgtgagtatgagagacaaagttgtacaaaagttgtactaaaatggttgtacaaatatcatttctc 11789762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 35491425 - 35491483
Alignment:
Q  29 atgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||||||||| |||||||||||||| |||| |||| ||| ||||||||||||||||||    
T  35491425 atgagagagaaaattgtacaaaagttgtacataaatggttatacaaatatcatttctct 35491483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 37969997 - 37969931
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttata-caaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||  ||||||||||||| || |||||  |||||||||||||||||||||    
T  37969997 aatgtgagtatgagagagaaagttgtacaaaagttgtatcaaaatagttgtacaaatatcatttctc 37969931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 23034318 - 23034383
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttct 84  Q
    ||||||| |||||||||  || |||||||||| || |||||||||| |||||||||||||||||||    
T  23034318 aatgtgagtatgagagaataggttgtacaaaaattgtacaaaaatggttgtacaaatatcatttct 23034383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 33050248 - 33050183
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    |||||| ||||||||||||  ||||||||||||| | ||||||  |||||||||||||||||||||    
T  33050248 atgtgagtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 33050183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 4971356 - 4971288
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||| ||||||| | ||||||  |||||||||||||||||||||||    
T  4971356 aatgtgagtatgagagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcatttctctt 4971288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 5378693 - 5378625
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||  ||||||| || ||||||| ||||||||||||||||||||||    
T  5378693 aatgtgagtatgagagagaaagttgtcaaaaagttgtataaaaatggttgtacaaatatcatttctctt 5378625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 16567382 - 16567314
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||| |||||| |||||  ||||||||||  |||||| ||||||||||||||||||||||    
T  16567382 aatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcatttctctt 16567314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 16598280 - 16598348
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||| |||||| |||||  ||||||||||  |||||| ||||||||||||||||||||||    
T  16598280 aatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcatttctctt 16598348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 48522222 - 48522154
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||| ||  ||||  ||||||| |||||||||| ||||||||||||||||||||||    
T  48522222 aatgtgagtatgagagaaaaagttgtctaaaagttgtacaaaaatggttgtacaaatatcatttctctt 48522154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 2600539 - 2600610
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttgtg 90  Q
    ||||||| | ||||||| ||  ||||||||||||| ||| |||||| |||||||||||||||||||| ||||    
T  2600539 aatgtgagtgtgagagaaaaagttgtacaaaagttgtactaaaatggttgtacaaatatcatttctcatgtg 2600610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 37385239 - 37385306
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    |||||| ||||||||||||  ||||||||||||| |  |||||| |||||||||||||||||| ||||    
T  37385239 atgtgagtatgagagagaaagttgtacaaaagttgtcaaaaaatagttgtacaaatatcatttatctt 37385306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 42060721 - 42060654
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    |||||| ||||||||||||  ||||  ||||||||||  |||||| ||||||||||||||||||||||    
T  42060721 atgtgagtatgagagagaaagttgtcaaaaagttatagcaaaatggttgtacaaatatcatttctctt 42060654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 23910255 - 23910321
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatg-ttgtacaaatatcatttct 84  Q
    ||||||||||||||||| || ||||| ||||||||| |  ||||||| |||||||||||||||||||    
T  23910255 aatgtgaatatgagagaaaatattgtcacaaaagttgtcaaaaaatggttgtacaaatatcatttct 23910321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 28081787 - 28081853
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||  ||||| |||| |||| ||||||  |||||||||||||||||||||    
T  28081787 aatgtgagtatgagagagaaagttgtaaaaaaattattacaaaatggttgtacaaatatcatttctc 28081853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 29763888 - 29763830
Alignment:
Q  28 tatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| ||||  ||||||||||||||| ||||||  |||||||||||||||||||||    
T  29763888 tatgagaaagaaagttgtacaaaagttatcacaaaatggttgtacaaatatcatttctc 29763830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 41458905 - 41458971
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||  |||||||||| || ||| ||||| ||||||||||||| |||||||    
T  41458905 aatgtgagtatgagagagaaagttgtacaaaaattgtactaaaatggttgtacaaatattatttctc 41458971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 2347065 - 2347130
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    |||||| ||||||||||||  |||||| |||||| | ||||||  |||||||||||||||||||||    
T  2347065 atgtgagtatgagagagaaagttgtaccaaagttgtcacaaaatggttgtacaaatatcatttctc 2347130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 35212960 - 35213025
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttata-caaaaatgttgtacaaatatcatttct 84  Q
    ||||||||||||||||||||  |||||||||| || || |||||   |||||||||||||||||||    
T  35212960 aatgtgaatatgagagagaaagttgtacaaaaattgtagcaaaataattgtacaaatatcatttct 35213025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 44175610 - 44175545
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    |||||| ||||||||||||  ||||||||||||||| ||||||   |||||||||||| |||||||    
T  44175610 atgtgagtatgagagagaaagttgtacaaaagttatcacaaaatgattgtacaaatattatttctc 44175545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 47012574 - 47012643
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||| || ||||| |||||| ||||   |||||| ||||||||||||||||||||||    
T  47012574 aatgtgaatatgagagataaaattgtcacaaaaattattagaaaatgattgtacaaatatcatttctctt 47012643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 30864430 - 30864490
Alignment:
Q  28 tatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||||||||  ||||||||||||| | |||||   |||||||||||||||||||||||    
T  30864430 tatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctctt 30864490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 31398190 - 31398122
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  || | ||||||||| || ||||  |||||||||||||||||||||||    
T  31398190 aatgtgagtatgagagagaaagttatcacaaaagttgtataaaatggttgtacaaatatcatttctctt 31398122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 32529863 - 32529927
Alignment:
Q  24 tgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||  |||| |||||||||||| ||||  ||||| |||||||||||| ||||    
T  32529863 tgaatatgagagagaaagttgttacaaaagttataaaaaatagttgttcaaatatcatttatctt 32529927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 37325825 - 37325889
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttct 84  Q
    |||||| ||||| |||||| |||||||||||||| | |||||   ||||||||||||||||||||    
T  37325825 atgtgagtatgaaagagaaaattgtacaaaagttgtcacaaattggttgtacaaatatcatttct 37325889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 47379642 - 47379586
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttata-caaaaatgttgtacaaat 75  Q
    ||||||| |||||||||||| ||| |||||||||| || ||||| ||||||||||||    
T  47379642 aatgtgagtatgagagagaaaattatacaaaagttgtatcaaaattgttgtacaaat 47379586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 3e-19; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 34792089 - 34792021
Alignment:
Q  19 aaatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    |||||||| ||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||    
T  34792089 aaatgtgagtatgagagagaaggttgtacaaaagttgtacaaaaatgattgtacaaatatcatttctct 34792021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 27790240 - 27790306
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||| ||| ||||| ||||||| |||||||||| ||||||||||||||||||||    
T  27790240 aatgtgagtatgagagataaggttgtataaaagttgtacaaaaatggttgtacaaatatcatttctc 27790306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 3339505 - 3339572
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    |||||| ||||||||||||  ||||||||||||| | ||||||  |||||||||||||||||||||||    
T  3339505 atgtgagtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctctt 3339572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 6997555 - 6997621
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| |||||||||| |  | |||||||| |||||||||||| |||||||||||||||||||||    
T  6997555 aatgtgagtatgagagaggaagtagtacaaaaattatacaaaaatggttgtacaaatatcatttctc 6997621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 23653898 - 23653964
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||||||  ||||  |||||||||  |||||  |||||||||||||||||||||    
T  23653898 aatgtgagtatgagagagaaagttgtctaaaagttatcaaaaaagattgtacaaatatcatttctct 23653964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 7304130 - 7304199
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctcttg 88  Q
    ||||| ||||||||||||||  |||||||||| || || | |||| ||||||||||||| ||||||||||    
T  7304130 aatgtaaatatgagagagaaagttgtacaaaaattgtatagaaatcgttgtacaaatattatttctcttg 7304199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 8505778 - 8505847
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||  |||| ||||||||| |  ||||||| |||| |||||||||||||||||    
T  8505778 aatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttctctt 8505847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 8645375 - 8645307
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| ||||||||| |  |||| |||||| |||||||||||||||||    
T  8645375 aatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtgttgttcaaatatcatttctctt 8645307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 15722508 - 15722576
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||| ||||  ||||||| |   |||||| ||||||||||||||||||||||    
T  15722508 aatgtgagtatgagagagaaggttgtcaaaaagttgtcacaaaatgattgtacaaatatcatttctctt 15722576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 19789081 - 19789149
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||  ||||||| ||  |||||| ||||||||||||||||||||||    
T  19789081 aatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctctt 19789149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 26391288 - 26391360
Alignment:
Q  20 aatgtgaatatgagaga-gaagattgtacaaaa-gttatacaaaaatg-ttgtacaaatatcatttctcttgt 89  Q
    ||||||| ||||||||| ||| ||||||||||| ||| |  ||||||| ||||||||||||||||||||||||    
T  26391288 aatgtgagtatgagagaagaaaattgtacaaaaagttgttaaaaaatggttgtacaaatatcatttctcttgt 26391360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 32729955 - 32729887
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||| ||||||| |   |||||| ||||||||||||||||||||||    
T  32729955 aatgtgagtatgagagagaaagttgtataaaagttgtcagaaaatggttgtacaaatatcatttctctt 32729887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 29555843 - 29555911
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  29555843 aatgtgagtatgagagagaaggttgtacaaaagttatacaaaaatggttgtacaaatattatttctctt 29555911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 48205111 - 48205045
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  48205111 aatgtgagtatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttctc 48205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 7351651 - 7351710
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    |||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  7351651 tatgagagagaaaattgtacaaaaattatacaaaaatggttgtacaaatatcatttctct 7351710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 14839050 - 14839116
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| |||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  14839050 aatgtgagtatgggagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 14839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 30664569 - 30664503
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||    
T  30664569 aatgtgagtatgagagagaaagttgtacaaaagttgtacaaaaatgattgtacaaatatcatttctc 30664503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 55264875 - 55264817
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  55264875 tatgagaaagaagattgtataaaagttatacaaaaatggttgtacaaatatcatttctc 55264817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 9159041 - 9159109
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||| |||||| ||||||||||| || ||||||||| |||||||||||||||||||||||    
T  9159041 aatgtgagtatgaaagagaaaattgtacaaaaattgtacaaaaatggttgtacaaatatcatttctctt 9159109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 38471708 - 38471644
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttc 83  Q
    ||||||| |||||||||||| |||||||||||||| ||| ||||| |||||||||||||||||||    
T  38471708 aatgtgagtatgagagagaaaattgtacaaaagttgtaccaaaatggttgtacaaatatcatttc 38471644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 45517662 - 45517730
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||||||| | ||||  || |||||||||||||||||||| |||||||||||||||||||||||    
T  45517662 aatgtgaatatgaaaaagaaagttatacaaaagttatacaaaaatggttgtacaaatatcatttctctt 45517730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 50025703 - 50025771
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||||||||| |||||| ||||| |||||||||||||||||||||||    
T  50025703 aatgtgagtatgagagagaaagttgtacaaaatttataccaaaatggttgtacaaatatcatttctctt 50025771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 17118463 - 17118400
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcattt 82  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||| ||||||||||||||||||    
T  17118463 aatgtgagtatgagagaaaaaattgtacaaaagttgtacaaaaatggttgtacaaatatcattt 17118400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 42888785 - 42888844
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    |||||||||||| |||||||||||||| ||||||||| | ||||||||||||||||||||    
T  42888785 tatgagagagaaaattgtacaaaagttgtacaaaaatggctgtacaaatatcatttctct 42888844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 38296671 - 38296733
Alignment:
Q  24 tgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    |||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||| |||||||    
T  38296671 tgaatatgagagagaaaattgtacaaaagttgtactaaaatggttgtacaaatattatttctc 38296733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 41112077 - 41112143
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||| || ||| |  ||||||| |||||||||||||||||||||||||||||||    
T  41112077 aatgtgagtatgagagataaaattatcaaaaagttgtacaaaaatgttgtacaaatatcatttctct 41112143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 11327173 - 11327101
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctcttgtgaa 92  Q
    |||||| ||||||||||||  ||||||||||||| | ||||||  ||||||||||||||||||||| ||||||    
T  11327173 atgtgagtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctcatgtgaa 11327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 16479698 - 16479630
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| ||||||||| |||||||  |||||||||||||||||||||||    
T  16479698 aatgtgagtatgagagagaaagttgtcacaaaagttgtacaaaatggttgtacaaatatcatttctctt 16479630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 33971949 - 33971881
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||| || |||||||||||||| ||||| ||| |||||| ||||||||||||||||    
T  33971949 aatgtgagtatgagagataaaattgtacaaaagttgtacaagaatggttgtataaatatcatttctctt 33971881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 47141607 - 47141671
Alignment:
Q  22 tgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||| ||||||||||||  |||||||||| |||||| ||||| |||||||||||||||||||||    
T  47141607 tgtgagtatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttctc 47141671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 288792 - 288721
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaat-gttgtacaaatatcatttctcttgt 89  Q
    ||||||| ||||||||||||  |||| |||||||||||| |||||| ||||| |||||||||||||||||||    
T  288792 aatgtgagtatgagagagaaagttgtcacaaaagttataaaaaaattgttgttcaaatatcatttctcttgt 288721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 2280243 - 2280176
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||| | ||||||||||  ||||||||||||| ||| |||||| |||||||||||||||||||||    
T  2280243 aatgtgagtgtgagagagaaagttgtacaaaagttgtactaaaatggttgtacaaatatcatttctct 2280176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 44910763 - 44910696
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||| |||||||||||||||| ||||||||||||   ||||||  ||||||||||||||||||||    
T  44910763 aatgtgagtatgagagagaagattatacaaaagttatcataaaatgaatgtacaaatatcatttctct 44910696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 14847523 - 14847589
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| |||||||||||| ||| |||||||||| ||| ||||| |||| ||||||||||||||||    
T  14847523 aatgtgagtatgagagagaaaattatacaaaagttgtaccaaaatggttgcacaaatatcatttctc 14847589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 25559766 - 25559704
Alignment:
Q  24 tgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||||||||||||  ||||| |||| |||||| ||||| |||||||||||||||||||||    
T  25559766 tgaatatgagagagaaagttgtataaaaattataccaaaatggttgtacaaatatcatttctc 25559704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 38944147 - 38944213
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    |||||| |||||||||||| |||||||||||||| | |||||   ||||||||||||||||||||||    
T  38944147 atgtgagtatgagagagaaaattgtacaaaagttgtcacaaattagttgtacaaatatcatttctct 38944213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 30400164 - 30400229
Alignment:
Q  23 gtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    |||| ||||||||||||  ||||||||||||| | |||||  ||||||||||||||||||||||||    
T  30400164 gtgagtatgagagagaaagttgtacaaaagttgtcacaaatttgttgtacaaatatcatttctctt 30400229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 43894990 - 43895055
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttct 84  Q
    ||||||||||||||||| ||  |||||||||| |||||||||||| ||||||||| | ||||||||    
T  43894990 aatgtgaatatgagagataaagttgtacaaaaattatacaaaaatggttgtacaagtttcatttct 43895055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 9557927 - 9557995
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttata-caaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||||||||| || || ||||| ||||||| ||||||||||||||||    
T  9557927 aatgtgagtatgagagagaaagttgtacaaaaattgtatcaaaattgttgtataaatatcatttctctt 9557995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 32151946 - 32151886
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||||||| || ||||||| ||||||||||||  ||||||| ||||||||||||||    
T  32151946 tatgagagagaaggttatacaaaaattatacaaaaataattgtacacatatcatttctctt 32151886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 36301213 - 36301281
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    |||||||  |||||||||||  ||||||||||||| |||||||||| | |||||||||| |||||||||    
T  36301213 aatgtgagcatgagagagaaagttgtacaaaagttgtacaaaaatgatcgtacaaatataatttctctt 36301281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 45711444 - 45711508
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttc 83  Q
    ||||||| |||||||||||| ||||| ||||||||| || |||| |||||| |||||||||||||    
T  45711444 aatgtgagtatgagagagaaaattgtcacaaaagttgtaaaaaattgttgttcaaatatcatttc 45711508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 46344476 - 46344412
Alignment:
Q  24 tgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    |||||||||||||||| ||||||||||| || | |||||   |||||||||||||||||||||||    
T  46344476 tgaatatgagagagaaaattgtacaaaaattgtaacaaattagttgtacaaatatcatttctctt 46344412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 6178430 - 6178496
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||| |||||||||||| ||||| ||||||||| | ||||||| |||||||||||||||||||||    
T  6178430 aatgtgagtatgagagagaaaattgtcacaaaagttgt-caaaaatagttgtacaaatatcatttctc 6178496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 8254092 - 8254025
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    |||||| ||||||||||||  |||||| |||||| | ||||||  |||||||||||||||||||||||    
T  8254092 atgtgagtatgagagagaaagttgtaccaaagttgtcacaaaatggttgtacaaatatcatttctctt 8254025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 36819021 - 36818954
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    |||||| ||||||||||||  ||||||||||||| | |||||   |||||||||||||||||||||||    
T  36819021 atgtgagtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctctt 36818954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 39629843 - 39629906
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaat-gttgtacaaatatcatt 81  Q
    ||||||| ||||||||||||| |||| ||||||||| || |||||| |||||||||||||||||    
T  39629843 aatgtgagtatgagagagaaggttgtcacaaaagttgtaaaaaaatagttgtacaaatatcatt 39629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 42755721 - 42755654
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    ||||||| |||||||||||| |||||  ||||||| | | |||||| |||||||||||||||||||||    
T  42755721 aatgtgagtatgagagagaaaattgtttaaaagttgtcaaaaaaatattgtacaaatatcatttctct 42755654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 44689836 - 44689793
Alignment:
Q  42 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttct 84  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  44689836 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttct 44689793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 44689869 - 44689817
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaa 74  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||  ||||||||||    
T  44689869 aatgtgagtatgagagaaaagattgtacaaaagttgtacaaaa--gttgtacaaa 44689817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 52381242 - 52381179
Alignment:
Q  26 aatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttg 88  Q
    ||||||| ||| || ||| |||||||||||||| |||||| |||||||||||||||||| ||||    
T  52381242 aatatgaaagaaaaaattctacaaaagttataccaaaatggttgtacaaatatcatttcgcttg 52381179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 1295398 - 1295332
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||| ||  |||| |||||||||| ||||||  |||||||||||||||||||||    
T  1295398 aatgtgagtatgagagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcatttctc 1295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 1402716 - 1402650
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||| ||||||||||||| | | ||||  | |||||||||||||||||||    
T  1402716 aatgtgagtatgagagagaaggttgtacaaaagttgtcataaaatggatgtacaaatatcatttctc 1402650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 3957887 - 3957829
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatttctct 86  Q
    ||||||||||||  ||||| ||||||| |  ||||| ||||||||||||||||||||||    
T  3957887 tatgagagagaaagttgtataaaagttgtcaaaaaaggttgtacaaatatcatttctct 3957829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 16295530 - 16295464
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttata-caaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| ||||||||||||  ||||||||||||| || ||||   |||||||||||||||||||||    
T  16295530 aatgtgagtatgagagagaaagttgtacaaaagttgtatcaaattggttgtacaaatatcatttctc 16295464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 29525299 - 29525233
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||| |||||||||||| |||||||||||||| |   ||||||  |||||||||||||||||||    
T  29525299 aatgtgagtatgagagagaatattgtacaaaagttgtcataaaatgaatgtacaaatatcatttctc 29525233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 32931924 - 32931990
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    |||||| ||||||||||||  ||||||||||||| | |||||   ||||||||||||||||||||||    
T  32931924 atgtgagtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctct 32931990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 42643297 - 42643235
Alignment:
Q  24 tgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||||||||||||  ||||||||||||| | | ||| | |||||||||||||||||||||    
T  42643297 tgaatatgagagagaaagttgtacaaaagttgttccaaattggttgtacaaatatcatttctc 42643235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 48944723 - 48944781
Alignment:
Q  28 tatgagagagaagattgtacaaaagtt-atacaaaaatgttgtacaaatatcatttctc 85  Q
    |||||||||||| ||||||||||||||  || ||||  |||||||||||||||||||||    
T  48944723 tatgagagagaaaattgtacaaaagttgttagaaaatggttgtacaaatatcatttctc 48944781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 51771444 - 51771510
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| |||||||||||| ||| | | |||| ||||||||||  |||||||||||||||||||||    
T  51771444 aatgtgagtatgagagagaaaattatcaaaaaaattatacaaaatggttgtacaaatatcatttctc 51771510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 26550304 - 26550235
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||  |||| |||||| ||||  |||||| ||||| |||||||||||||||||    
T  26550304 aatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaatggttgtgcaaatatcatttctctt 26550235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 48405477 - 48405408
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| ||||||||| | ||||||  |||||||||||||||||||||||    
T  48405477 aatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcatttctctt 48405408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 50559224 - 50559285
Alignment:
Q  28 tatgagagagaagattgt-acaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    |||||||||||| ||||| ||||||||| |  |||||| |||||||||||||||||||||||    
T  50559224 tatgagagagaaaattgtcacaaaagttgtcaaaaaatagttgtacaaatatcatttctctt 50559285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 7219 - 7287
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| |||||||| |   |||||| ||||||||||||||||||||||    
T  7219 aatgtgagtatgagagagaaagttgtccaaaagttgtcagaaaatgattgtacaaatatcatttctctt 7287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 7867716 - 7867784
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||| |||| |||||  ||||||| | ||||||  |||||||||||||||||||||||    
T  7867716 aatgtgagtatgagaaagaaaattgtttaaaagttgtcacaaaatagttgtacaaatatcatttctctt 7867784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 9027679 - 9027611
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||| ||||| ||  ||||||||||||| || ||||||| ||||||||||| ||||||||||    
T  9027679 aatgtgagtatcagagataaagttgtacaaaagttgtataaaaatggttgtacaaataacatttctctt 9027611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 19150323 - 19150391
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||| ||||||||||||||  |||| ||||||||| |  ||||||| |||||||||||||||||||||    
T  19150323 aatgtaaatatgagagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctct 19150391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 20549390 - 20549458
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||||||||||||||||  || ||||||| |||| | ||||  | |||||||||||||||||||||    
T  20549390 aatgtgaatatgagagagaatgttatacaaaaattatcataaaatagatgtacaaatatcatttctctt 20549458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 27198173 - 27198233
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||||| || |||||  |||||||||  ||||||| ||||||||||||||||||||||    
T  27198173 tatgagagataaaattgtttaaaagttatcaaaaaatgattgtacaaatatcatttctctt 27198233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 32187208 - 32187144
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttat-acaaaaatgttgtacaaatatcattt 82  Q
    ||||||||||||||||||||| |||| | ||||||| | ||||||  ||||||||||||||||||    
T  32187208 aatgtgaatatgagagagaaggttgtcataaaagttgtcacaaaatggttgtacaaatatcattt 32187144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 33939302 - 33939238
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttc 83  Q
    ||||||||||||||||||||  |||| |||||| ||||| ||||  ||||| |||||||||||||    
T  33939302 aatgtgaatatgagagagaaagttgtcacaaaaattataaaaaatggttgttcaaatatcatttc 33939238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 40419648 - 40419712
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttct 84  Q
    ||||||||||||||||||| |||||  |||| |||| ||||||   |||||||||||||||||||    
T  40419648 atgtgaatatgagagagaaaattgtctaaaaattatcacaaaatgattgtacaaatatcatttct 40419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 49196762 - 49196694
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| |||||||||||| |||||   |||||| | ||||||  |||||||||||||||||||||||    
T  49196762 aatgtgagtatgagagagaaaattgtcacaaagttgtcacaaaatggttgtacaaatatcatttctctt 49196694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 49361857 - 49361897
Alignment:
Q  48 aaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  49361857 aaaagttgtacaaaaatgattgtacaaatatcatttctctt 49361897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 53715365 - 53715337
Alignment:
Q  59 aaaaatgttgtacaaatatcatttctctt 87  Q
    |||||||||||||||||||||||||||||    
T  53715365 aaaaatgttgtacaaatatcatttctctt 53715337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 54233495 - 54233539
Alignment:
Q  42 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||    
T  54233495 ttgtacaaaagttgtaaaaaaatggttgtacaaatatcatttctc 54233539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 5e-18; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 35037675 - 35037605
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttata-caaaaatgttgtacaaatatcatttctcttgt 89  Q
    |||||||||||||||||||| |||||||||||||| || |||||  |||||||||||||||||||||||||    
T  35037675 aatgtgaatatgagagagaatattgtacaaaagttgtatcaaaatggttgtacaaatatcatttctcttgt 35037605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 36110200 - 36110134
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    ||||||||||||||||||||| |||||||||| || ||||||||| |||||||||||||||||||||    
T  36110200 aatgtgaatatgagagagaaggttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctc 36110134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 50291348 - 50291280
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||| ||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  50291348 aatgtgagtatgagagagaaggttgtataaaagttgtacaaaaatgattgtacaaatatcatttctctt 50291280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 51107446 - 51107513
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||| ||||||||||||||  |||| ||||| ||||||||||||| |||||||||||||||||||||    
T  51107446 aatgtaaatatgagagagaaagttgtgcaaaaattatacaaaaatgattgtacaaatatcatttctct 51107513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 53781842 - 53781908
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatttctct 86  Q
    ||||||| ||||| |||||| |||||| ||||||| |||||||  ||||||||||||||||||||||    
T  53781842 aatgtgagtatgaaagagaaaattgtataaaagttgtacaaaatagttgtacaaatatcatttctct 53781908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 55960758 - 55960700
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 85  Q
    |||||||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||    
T  55960758 tatgagagagaaaattgtacaaaagttataccaaaatggttatacaaatatcatttctc 55960700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 29577441 - 29577509
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||| ||||  |||||||||| || ||||||||| |||||||||||||||||||||||    
T  29577441 aatgtgagtatgagaaagaaagttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctctt 29577509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 31318820 - 31318752
Alignment:
Q  19 aaatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    |||||||| ||||||||||||  |||||||||| || ||| ||||| ||||||||||||||||||||||    
T  31318820 aaatgtgagtatgagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctct 31318752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 55609170 - 55609238
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| ||||||||| |||||||  |||||||||||||||||||||||    
T  55609170 aatgtgagtatgagagagaaagttgtcacaaaagttgtacaaaatggttgtacaaatatcatttctctt 55609238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 4577623 - 4577556
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||||||  |||||||||| || ||| |||||| |||||||||||||||||||||    
T  4577623 aatgtgagtatgagagagaaagttgtacaaaaattgtacgaaaatggttgtacaaatatcatttctct 4577556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 18874927 - 18874994
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||  ||||||| |  |||||||||||||||||||||||||||||    
T  18874927 aatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatgttgtacaaatatcatttctctt 18874994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 29863609 - 29863550
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||| ||||||  ||||||||||||||||| |||||| |||||||||||||||||||||    
T  29863609 tatgaaagagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttctct 29863550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 46355298 - 46355365
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||||||  ||||| ||||||| ||||||| | ||||||||||||||||||||||    
T  46355298 aatgtgagtatgagagagaatgttgtataaaagttgtacaaaagtggttgtacaaatatcatttctct 46355365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 48650269 - 48650328
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||||||||||  ||||||||||||| ||||||||| |||||||||||| |||||||||    
T  48650269 tatgagagagaaagttgtacaaaagttttacaaaaatagttgtacaaataacatttctct 48650328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 53662434 - 53662501
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    |||||||||||||||||||  |||||||||| || | ||||||  |||||||||||||||||||||||    
T  53662434 atgtgaatatgagagagaaagttgtacaaaaattgttacaaaatagttgtacaaatatcatttctctt 53662501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 54801501 - 54801559
Alignment:
Q  29 atgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||||||| ||||||||||| |||||  |||||| |||||||||||||||||||||    
T  54801501 atgagagagaaaattgtacaaaaattataataaaatgattgtacaaatatcatttctct 54801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 3475934 - 3475869
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    |||||||||||||||||||  ||||||||||||| | | ||||  |||||||||||||||||||||    
T  3475934 atgtgaatatgagagagaaagttgtacaaaagttgtcataaaatggttgtacaaatatcatttctc 3475869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 4878025 - 4877964
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgt-acaaatatcatttctctt 87  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||| | ||||||||||||||||    
T  4878025 tatgagagagaaggttgtacaaaagttgtacaaaaatggttgtaaaaaatatcatttctctt 4877964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 32294765 - 32294806
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaa 61  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  32294765 aatgtgagtatgagagagaaggttgtacaaaagttatacaaa 32294806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 38960673 - 38960730
Alignment:
Q  28 tatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttct 84  Q
    ||||||||||||| ||||| |||| || ||||||||| ||||||||||||||||||||    
T  38960673 tatgagagagaaggttgtataaaaattgtacaaaaatggttgtacaaatatcatttct 38960730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 52456932 - 52456997
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| |||||||||||| |||||  ||||||| |  |||||| ||||||||||||||||||||    
T  52456932 aatgtgagtatgagagagaaaattgtctaaaagttgtcaaaaaatattgtacaaatatcatttctc 52456997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 54803333 - 54803402
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctcttg 88  Q
    ||||||| ||||||||||||  |||||||||| ||  || ||||| ||||||||||||||||||||||||    
T  54803333 aatgtgagtatgagagagaaagttgtacaaaaattgcaccaaaatagttgtacaaatatcatttctcttg 54803402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 5208332 - 5208400
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||||||||||| | |||||   |||||||||||||||||||||||    
T  5208332 aatgtgagtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctctt 5208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 7037492 - 7037560
Alignment:
Q  23 gtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctcttgtg 90  Q
    |||| |||||||||||| |||||||||||||| | |||||   ||||||||||||||||||||| ||||    
T  7037492 gtgagtatgagagagaaaattgtacaaaagttgtcacaaattggttgtacaaatatcatttctcatgtg 7037560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 26442395 - 26442463
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| |||||| |||||  |||| |||||||| ||| |||||| ||||||||||||||||||||||    
T  26442395 aatgtgagtatgagtgagaaagttgtgcaaaagttgtaccaaaatggttgtacaaatatcatttctctt 26442463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 35824113 - 35824177
Alignment:
Q  22 tgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 85  Q
    ||||| ||||||| |||||||||| |||||||| |  ||||||| ||||||||||||||||||||    
T  35824113 tgtgagtatgagaaagaagattgtccaaaagttgttaaaaaatggttgtacaaatatcatttctc 35824177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 37297115 - 37297047
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| |||||||||||| ||||| ||||||||| || ||||  ||||| |||||||||||||||||    
T  37297115 aatgtgagtatgagagagaaaattgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctctt 37297047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 1987718 - 1987785
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 86  Q
    ||||||| | ||||||||||  |||||||||| || ||| |||||| |||||||||||||||||||||    
T  1987718 aatgtgagtgtgagagagaaagttgtacaaaaattgtactaaaatggttgtacaaatatcatttctct 1987785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 1796423 - 1796365
Alignment:
Q  29 atgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    ||||||||||| |||||||||||||| | |||||   ||||||||||||||||||||||    
T  1796423 atgagagagaaaattgtacaaaagttgtcacaaattggttgtacaaatatcatttctct 1796365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 18880851 - 18880785
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    ||||||| |||||||||||| |||||  ||||||||| | |||| ||||||||| ||||||||||||    
T  18880851 aatgtgagtatgagagagaaaattgtctaaaagttatcataaaattgttgtacatatatcatttctc 18880785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 18944345 - 18944303
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaa 62  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||    
T  18944345 aatgtgagtatgagagagaaggttgtacaaaagttgtacaaaa 18944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 23133564 - 23133610
Alignment:
Q  42 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  23133564 ttgtacaaaagttgtacaaaaatggttgtacaaatataatttctctt 23133610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Complemental strand, 33776944 - 33776906
Alignment:
Q  49 aaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  33776944 aaagttgtacaaaaatattgtacaaatatcatttctctt 33776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 43307396 - 43307438
Alignment:
Q  42 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttc 83  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  43307396 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttc 43307438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 49424827 - 49424893
Alignment:
Q  22 tgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||| ||||||||||||  ||||  ||||||| | ||||||| |||||||||||||||||||||||    
T  49424827 tgtgagtatgagagagaaagttgtcaaaaagttgttacaaaaaggttgtacaaatatcatttctctt 49424893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 52669615 - 52669681
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    |||||| ||||||||||||  ||||||||||||||| |||||    |||||||||||||||||||||    
T  52669615 atgtgactatgagagagaaagttgtacaaaagttatcacaaattgtttgtacaaatatcatttctct 52669681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 4100761 - 4100826
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    |||||| |||||||||||| |||||||||||| | | ||||||  |||| ||||||||||||||||    
T  4100761 atgtgagtatgagagagaaaattgtacaaaaggtgtcacaaaatggttgaacaaatatcatttctc 4100826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 8614242 - 8614201
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaa 61  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||    
T  8614242 aatgtgagtatgagagagaaggttgtacaaaagttgtacaaa 8614201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 28134438 - 28134393
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg 65  Q
    |||||||||||| ||||||| |||||||||||||| ||| ||||||    
T  28134438 aatgtgaatatgggagagaaaattgtacaaaagttgtaccaaaatg 28134393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 31413809 - 31413850
Alignment:
Q  49 aaagttatacaaaaat-gttgtacaaatatcatttctcttgt 89  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  31413809 aaagttgtacaaaaatagttgtacaaatatcatttctcttgt 31413850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 40348860 - 40348788
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatg-ttgtacaaatatcatttctcttgtga 91  Q
    ||||||| |||||||||||| ||||| |||||| ||||| ||||||| |||| |||||||||||||||| ||||    
T  40348860 aatgtgagtatgagagagaaaattgtcacaaaaattata-aaaaatgattgttcaaatatcatttctctcgtga 40348788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 50890078 - 50890146
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| ||||||||| | ||||||| |||||||||||||||||||||||    
T  50890078 aatgtgagtatgagagagaaagttgtcacaaaagttgt-caaaaatagttgtacaaatatcatttctctt 50890146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 56557800 - 56557731
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| |||||||||||| ||||| ||||||||| | | |||| |||||| |||||||||||||||||    
T  56557800 aatgtgagtatgagagagaaaattgtcacaaaagttgtcataaaattgttgttcaaatatcatttctctt 56557731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 22893934 - 22893867
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||| ||||||  ||||| |||| || |||||||||| ||||||||||||||||||||||    
T  22893934 aatgtgagtatgaaagagaaagttgtaaaaaa-ttgtacaaaaatgattgtacaaatatcatttctctt 22893867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 22945602 - 22945535
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||| ||||||  ||||| |||| || |||||||||| ||||||||||||||||||||||    
T  22945602 aatgtgagtatgaaagagaaagttgtaaaaaa-ttgtacaaaaatgattgtacaaatatcatttctctt 22945535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 36444400 - 36444468
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||  |||||||||   |||||| ||||||||||||||||||||||    
T  36444400 aatgtgagtatgagagagaaagttgttaaaaagttatcataaaatggttgtacaaatatcatttctctt 36444468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 40629348 - 40629412
Alignment:
Q  23 gtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctct 86  Q
    |||| ||||||||||||  |||| |||| ||||| ||||||  ||||||||||||||||||||||    
T  40629348 gtgagtatgagagagaaagttgtccaaaggttattacaaaatagttgtacaaatatcatttctct 40629412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 41170838 - 41170771
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| |||||||| ||| |||||| ||||||||||||||||| ||||    
T  41170838 aatgtgagtatgagagagaaagttgt-caaaagttgtaccaaaatggttgtacaaatatcatttatctt 41170771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 42815470 - 42815402
Alignment:
Q  21 atgtgaatatgagagagaagattgt-acaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    |||||| ||||||||||||  |||| ||||||||| | ||||||  |||||||||||||||||||||||    
T  42815470 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatagttgtacaaatatcatttctctt 42815402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 44272815 - 44272883
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  ||||  ||||||| |  |||||| |||||||||||||||||||||||    
T  44272815 aatgtgagtatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctctt 44272883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 53384344 - 53384400
Alignment:
Q  32 agagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    |||||||| ||||||||||||||||   ||| || ||||||||||||||||||||||    
T  53384344 agagagaaaattgtacaaaagttattacaaattgattgtacaaatatcatttctctt 53384400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 145127 - 145060
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  145127 aatgtgagtatgagagagaatgttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctct 145060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 48720 - 48657
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcattt 82  Q
    ||||||| ||||||||||||| |||||||||| || |||||||||| |||||||||||||||||    
T  48720 aatgtgagtatgagagagaaggttgtacaaaaattgtacaaaaatgattgtacaaatatcattt 48657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 4850 - 4918
Alignment:
Q  19 aaatgtgaatatgagagagaagattgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 86  Q
    |||||||| ||||||||||||  |||||||||| || ||| ||||| ||||||||||||||||||||||    
T  4850 aaatgtgagtatgagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctct 4918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 72431 - 72365
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagtt-atacaaaaatgttgtacaaatatcatttctct 86  Q
    ||||||||||||||||||| ||||| ||||||||  | |||||  ||||||||||||||||||||||    
T  72431 atgtgaatatgagagagaaaattgttcaaaagttgttgcaaaatggttgtacaaatatcatttctct 72365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 18660 - 18595
Alignment:
Q  21 atgtgaatatgagagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 85  Q
    |||||| ||||||||||||  ||||||||||||||| |||||   |||||||||||||||||||||    
T  18660 atgtgagtatgagagagaaagttgtacaaaagttatcacaaattggttgtacaaatatcatttctc 18595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 976 - 908
Alignment:
Q  20 aatgtgaatatgagagagaagattgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 87  Q
    ||||||| |||||||||||| ||| ||||||| |||||  ||| || ||||||||||||||||||||||    
T  976 aatgtgagtatgagagagaaaattatacaaaaattatatcaaattggttgtacaaatatcatttctctt 908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 366360 - 366294
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctc 85  Q
    ||||||||||||||||||||  |||| ||||||||| |  ||||  |||||||||||||||||||||    
T  366360 aatgtgaatatgagagagaaagttgtcacaaaagttgttaaaaatggttgtacaaatatcatttctc 366294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 88862 - 88806
Alignment:
Q  32 agagagaagattgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 87  Q
    |||||||| |||||| ||||||||| |||||   |||||||||||||||||||||||    
T  88862 agagagaaaattgtataaaagttatcacaaattggttgtacaaatatcatttctctt 88806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 49361 - 49293
Alignment:
Q  20 aatgtgaatatgagagagaagattgt-acaaaagttatacaaaaatgttgtacaaatatcatttctctt 87  Q
    ||||||| ||||||||||||  |||| | |||||||||| ||||  ||||| |||||||||||||||||    
T  49361 aatgtgagtatgagagagaaagttgtcataaaagttataaaaaatggttgttcaaatatcatttctctt 49293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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