View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17756_low_11 (Length: 290)
Name: NF17756_low_11
Description: NF17756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17756_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 13137825 - 13137545
Alignment:
| Q |
1 |
agggtattgcaaattcgggggtatacaaatcttgtataagtgttaaacaagattacattatagagaccactattgtttcatatgataattcatacactga |
100 |
Q |
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| T |
13137825 |
agggtattgcaaattcgggggtatacaaatcttgtataagtgttaaacaagattacattatagagaccactattgtttcatatgataattcatacactga |
13137726 |
T |
|
| Q |
101 |
caannnnnnngttctacaaatgaagaaaaagaaaaaccatgccaatgcttacatggtgactatggcacactattatgttaccaactttgctggtctttct |
200 |
Q |
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| T |
13137725 |
caatttttttgttctacaaatgaagaaaaagaaaaaccatgccaatgcttacatggtgactatggcacactattatgttaccaactttgctggtctttct |
13137626 |
T |
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| Q |
201 |
tctgcagcaaaaatataccgtagtagaggaaaaggttttattgttgaagtgaagggtccttacaaacatccaagtgatgat |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13137625 |
tctgcagcaaaaatataccgtagtagaggaaaaggttttattgttgaagtgaagggtccttacaaacatccaagtgatgat |
13137545 |
T |
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