View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17756_low_9 (Length: 384)
Name: NF17756_low_9
Description: NF17756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17756_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 165; Significance: 4e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 24 - 228
Target Start/End: Original strand, 6728611 - 6728816
Alignment:
| Q |
24 |
tcacaactattgaaaaaagttcttgtgccttatattattatatggtttccnnnnnnntttagcttggcttgctgactaggagatgactttaatttct-aa |
122 |
Q |
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| T |
6728611 |
tcacaactattgaaaaaagttcttgtgccttatattattatatggtttccaaaaaaatttagcttggcttgctgactaggagatgactttaatttcttaa |
6728710 |
T |
|
| Q |
123 |
tttattaacaaatactcatattgctaattgttaatcctaacacttagtgcctgtaaaatagagatctcttttatacatcaactcgaatgtgattcaaacg |
222 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
6728711 |
tttattaacaaatactcacattgctaattgttaatcctaacacttagtgcttgtaaaatagagatctcttttatacataaactcgaatgtgattcaaacg |
6728810 |
T |
|
| Q |
223 |
tgatta |
228 |
Q |
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|||||| |
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| T |
6728811 |
tgatta |
6728816 |
T |
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