View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17757_low_13 (Length: 248)

Name: NF17757_low_13
Description: NF17757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17757_low_13
NF17757_low_13
[»] chr6 (21 HSPs)
chr6 (17-76)||(7829301-7829360)
chr6 (17-77)||(5645677-5645737)
chr6 (17-77)||(30860111-30860171)
chr6 (17-77)||(32224032-32224092)
chr6 (17-76)||(1292742-1292801)
chr6 (17-102)||(29835932-29836017)
chr6 (17-77)||(31038572-31038632)
chr6 (17-75)||(6888913-6888970)
chr6 (17-75)||(8939077-8939135)
chr6 (17-75)||(19048466-19048523)
chr6 (17-75)||(29048504-29048561)
chr6 (17-77)||(10286317-10286377)
chr6 (17-75)||(8286502-8286559)
chr6 (28-77)||(7873830-7873879)
chr6 (55-119)||(7829492-7829556)
chr6 (55-117)||(8938884-8938945)
chr6 (85-116)||(32223843-32223874)
chr6 (85-115)||(12153594-12153624)
chr6 (29-71)||(18700566-18700607)
chr6 (17-50)||(29836209-29836242)
chr6 (85-118)||(32224253-32224286)
[»] chr2 (29 HSPs)
chr2 (17-76)||(31309276-31309335)
chr2 (17-77)||(23461254-23461314)
chr2 (17-77)||(26892655-26892715)
chr2 (17-77)||(26898094-26898154)
chr2 (17-77)||(35251687-35251747)
chr2 (17-77)||(39110231-39110291)
chr2 (17-70)||(28957959-28958012)
chr2 (17-77)||(6645712-6645772)
chr2 (21-77)||(30785922-30785978)
chr2 (17-75)||(7031996-7032053)
chr2 (17-75)||(15129865-15129922)
chr2 (17-75)||(18904821-18904878)
chr2 (17-75)||(45001244-45001301)
chr2 (17-70)||(27516350-27516403)
chr2 (17-77)||(7182541-7182600)
chr2 (21-77)||(38578020-38578076)
chr2 (17-75)||(36099515-36099572)
chr2 (17-77)||(31309546-31309606)
chr2 (55-115)||(28958114-28958173)
chr2 (55-118)||(7031802-7031864)
chr2 (55-117)||(27516157-27516218)
chr2 (55-119)||(18904595-18904658)
chr2 (55-117)||(7032155-7032216)
chr2 (85-118)||(31309795-31309828)
chr2 (85-118)||(38578210-38578243)
chr2 (85-117)||(26892873-26892905)
chr2 (85-117)||(26898312-26898344)
chr2 (85-117)||(27516569-27516601)
chr2 (85-117)||(35589194-35589226)
[»] scaffold0135 (7 HSPs)
scaffold0135 (17-77)||(5727-5787)
scaffold0135 (17-77)||(9942-10002)
scaffold0135 (17-77)||(14157-14217)
scaffold0135 (17-77)||(18372-18432)
scaffold0135 (17-77)||(22587-22647)
scaffold0135 (17-77)||(26802-26862)
scaffold0135 (17-70)||(1512-1565)
[»] scaffold0012 (1 HSPs)
scaffold0012 (17-77)||(144906-144966)
[»] chr8 (29 HSPs)
chr8 (17-77)||(4881302-4881362)
chr8 (17-77)||(5881626-5881686)
chr8 (17-77)||(6513358-6513418)
chr8 (17-77)||(9237532-9237592)
chr8 (17-102)||(35181882-35181967)
chr8 (17-77)||(41387331-41387391)
chr8 (17-75)||(21524466-21524524)
chr8 (17-77)||(162470-162530)
chr8 (17-77)||(1259802-1259862)
chr8 (17-77)||(12850151-12850211)
chr8 (17-69)||(23152464-23152516)
chr8 (17-75)||(5821864-5821921)
chr8 (17-75)||(5876594-5876651)
chr8 (17-75)||(45467620-45467677)
chr8 (17-70)||(11901309-11901362)
chr8 (17-77)||(10397851-10397910)
chr8 (17-77)||(10398506-10398565)
chr8 (17-76)||(14054977-14055036)
chr8 (17-76)||(42984732-42984791)
chr8 (17-75)||(3317849-3317906)
chr8 (17-75)||(4325785-4325842)
chr8 (17-75)||(35103409-35103467)
chr8 (17-71)||(12823431-12823484)
chr8 (17-75)||(29802382-29802439)
chr8 (55-118)||(4325973-4326035)
chr8 (55-118)||(29802157-29802219)
chr8 (85-116)||(6513576-6513607)
chr8 (58-118)||(29802573-29802632)
chr8 (85-117)||(41387580-41387612)
[»] chr7 (14 HSPs)
chr7 (17-77)||(23351166-23351226)
chr7 (17-102)||(39383967-39384052)
chr7 (21-77)||(8735931-8735987)
chr7 (17-102)||(36782779-36782864)
chr7 (17-76)||(11687195-11687254)
chr7 (17-76)||(36701549-36701608)
chr7 (17-75)||(22207535-22207592)
chr7 (23-77)||(38340893-38340947)
chr7 (17-77)||(19069787-19069847)
chr7 (17-72)||(22151674-22151728)
chr7 (17-76)||(24417289-24417348)
chr7 (17-75)||(45057672-45057729)
chr7 (85-118)||(45057538-45057571)
chr7 (85-117)||(19105627-19105659)
[»] chr5 (30 HSPs)
chr5 (17-102)||(6132055-6132140)
chr5 (17-77)||(6172148-6172208)
chr5 (17-77)||(36442351-36442411)
chr5 (17-76)||(7278047-7278106)
chr5 (17-70)||(14858389-14858442)
chr5 (17-77)||(9438428-9438488)
chr5 (17-77)||(17094394-17094454)
chr5 (21-77)||(42381980-42382036)
chr5 (17-76)||(13476823-13476882)
chr5 (22-102)||(22803372-22803452)
chr5 (17-75)||(1156155-1156212)
chr5 (17-75)||(4349684-4349741)
chr5 (17-77)||(10503822-10503882)
chr5 (17-69)||(24100077-24100129)
chr5 (17-77)||(42026471-42026531)
chr5 (17-77)||(43476248-43476308)
chr5 (17-76)||(29906149-29906208)
chr5 (17-76)||(42381391-42381450)
chr5 (17-75)||(8127663-8127720)
chr5 (17-75)||(10570194-10570251)
chr5 (17-71)||(37812422-37812475)
chr5 (17-62)||(20841736-20841781)
chr5 (55-118)||(22803589-22803651)
chr5 (55-118)||(37812228-37812290)
chr5 (55-118)||(42026663-42026725)
chr5 (85-119)||(16791967-16792001)
chr5 (85-118)||(14858603-14858636)
chr5 (85-118)||(21289558-21289591)
chr5 (85-117)||(42026281-42026313)
chr5 (85-117)||(43476466-43476498)
[»] chr4 (24 HSPs)
chr4 (17-77)||(11822785-11822845)
chr4 (17-77)||(32617404-32617464)
chr4 (17-77)||(51949522-51949582)
chr4 (17-77)||(55013870-55013930)
chr4 (17-76)||(26107781-26107840)
chr4 (17-75)||(36611173-36611231)
chr4 (17-77)||(19630954-19631014)
chr4 (17-77)||(23330001-23330061)
chr4 (17-102)||(25764553-25764638)
chr4 (21-77)||(52766341-52766397)
chr4 (17-70)||(9203429-9203482)
chr4 (17-70)||(9207648-9207701)
chr4 (17-77)||(27509795-27509855)
chr4 (17-76)||(31208303-31208362)
chr4 (17-77)||(39899301-39899361)
chr4 (17-60)||(32155701-32155744)
chr4 (17-70)||(9100286-9100339)
chr4 (85-114)||(23329811-23329840)
chr4 (85-118)||(25764772-25764805)
chr4 (85-118)||(39899110-39899143)
chr4 (85-117)||(11822664-11822696)
chr4 (85-117)||(19631171-19631203)
chr4 (85-117)||(39899511-39899543)
chr4 (85-117)||(52766151-52766183)
[»] chr3 (30 HSPs)
chr3 (17-77)||(1070020-1070080)
chr3 (17-77)||(2800751-2800811)
chr3 (17-77)||(6950955-6951015)
chr3 (17-77)||(18024784-18024844)
chr3 (17-77)||(28004454-28004514)
chr3 (17-77)||(30385369-30385429)
chr3 (17-77)||(40941669-40941729)
chr3 (17-77)||(42592619-42592679)
chr3 (17-76)||(38771426-38771485)
chr3 (17-75)||(28033233-28033291)
chr3 (17-77)||(1364455-1364515)
chr3 (17-77)||(10817672-10817732)
chr3 (21-77)||(12061819-12061875)
chr3 (17-77)||(19794583-19794643)
chr3 (17-77)||(22977171-22977231)
chr3 (17-77)||(25629653-25629713)
chr3 (17-76)||(17934015-17934073)
chr3 (17-76)||(18270785-18270844)
chr3 (17-75)||(51891110-51891167)
chr3 (17-75)||(53204652-53204709)
chr3 (16-75)||(30267581-30267639)
chr3 (17-77)||(23090457-23090517)
chr3 (17-77)||(42213339-42213399)
chr3 (32-77)||(7588399-7588444)
chr3 (55-117)||(51891299-51891360)
chr3 (85-115)||(38771237-38771267)
chr3 (85-118)||(12061621-12061654)
chr3 (85-114)||(23090633-23090662)
chr3 (85-117)||(19794393-19794425)
chr3 (85-117)||(28004264-28004296)
[»] scaffold0026 (2 HSPs)
scaffold0026 (17-70)||(99794-99847)
scaffold0026 (85-118)||(100008-100041)
[»] scaffold0295 (1 HSPs)
scaffold0295 (17-77)||(8025-8085)
[»] scaffold0120 (1 HSPs)
scaffold0120 (21-77)||(27864-27920)
[»] chr1 (12 HSPs)
chr1 (21-77)||(10579482-10579538)
chr1 (17-77)||(11653067-11653127)
chr1 (17-77)||(14499444-14499504)
chr1 (17-77)||(17738445-17738505)
chr1 (17-77)||(52051421-52051481)
chr1 (17-75)||(17750347-17750405)
chr1 (17-77)||(7204115-7204174)
chr1 (17-62)||(13834902-13834947)
chr1 (17-70)||(48225211-48225264)
chr1 (85-116)||(14499255-14499286)
chr1 (85-115)||(28999458-28999488)
chr1 (85-115)||(52051230-52051260)
[»] scaffold0352 (2 HSPs)
scaffold0352 (17-77)||(11265-11325)
scaffold0352 (85-117)||(11452-11484)
[»] scaffold0180 (1 HSPs)
scaffold0180 (17-75)||(18528-18585)
[»] scaffold0009 (2 HSPs)
scaffold0009 (17-75)||(6863-6920)
scaffold0009 (85-117)||(6670-6702)
[»] scaffold0096 (1 HSPs)
scaffold0096 (20-69)||(5032-5081)


Alignment Details
Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 7829360 - 7829301
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7829360 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaacgaaac 7829301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 5645677 - 5645737
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  5645677 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 5645737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 30860111 - 30860171
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  30860111 aaccactttggtcctttatgctaggatgaatgtattagagttaagggaccaaaacgaaacc 30860171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 32224092 - 32224032
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  32224092 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 32224032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 1292801 - 1292742
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  1292801 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaac 1292742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 29836017 - 29835932
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaa 102  Q
    ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  29836017 aaccactttggtcatttatgttcggatgaatgtattagagttaagggaccaaaacgaaacaaaaaaagtaagttaagggaccaaaa 29835932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 31038572 - 31038632
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  31038572 aaccactttggtcctttatgttaggatgaatgtattagagttcagggaccaaaatgaaacc 31038632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 6888970 - 6888913
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  6888970 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 6888913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 8939077 - 8939135
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||    
T  8939077 aaccactttggtcgtttatgttaggatgaatgtattagagttaagggaccaaaatgaaa 8939135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 19048466 - 19048523
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  19048466 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 19048523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 29048504 - 29048561
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  29048504 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 29048561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 10286377 - 10286317
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||||    
T  10286377 aaccactttggtcctttatgttaggatgaatgtattagagttaaggaatcaaaatgaaacc 10286317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 8286502 - 8286559
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  8286502 aaccactttggtcttttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 8286559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 7873879 - 7873830
Alignment:
Q  28 tcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  7873879 tcctttatgttaggatgaatgtattagagttaaggtaccaaaatgaaacc 7873830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 7829492 - 7829556
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaacctaat 119  Q
    |||||||| ||||||||||||||       |||||||||||||||||||||||||||| ||||||    
T  7829492 agttaaggtaccaaaacgaaaccaaaaaaataagttaagggaccaaaagagtaattaagcctaat 7829556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 8938945 - 8938884
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||| ||||    
T  8938945 agttaagggaccaaaacgaaaccaaaaaa-taagttaagggaccaaaagagtaattaagccta 8938884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 116
Target Start/End: Complemental strand, 32223874 - 32223843
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacct 116  Q
    ||||||||||||||||||||||||||||||||    
T  32223874 taagttaagggaccaaaagagtaattaaacct 32223843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Original strand, 12153594 - 12153624
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacc 115  Q
    |||||||||||||||||||||||||||||||    
T  12153594 taagttaagggaccaaaagagtaattaaacc 12153624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 18700607 - 18700566
Alignment:
Q  29 cctttatattaggatgaatgtattagagttaagggaccaaaac 71  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  18700607 cctttatgttaggatgaatgtattagagttaa-ggaccaaaac 18700566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 29836242 - 29836209
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgta 50  Q
    ||||||||||||||||||| ||||||||||||||    
T  29836242 aaccactttggtcctttatgttaggatgaatgta 29836209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 32224253 - 32224286
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||||||| |||||    
T  32224253 taagttaagggaccaaaagagtaattaaccctaa 32224286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 31309276 - 31309335
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31309276 aaccactttggtcatttatattaggatgaatgtattagagttaagggaccaaaacgaaac 31309335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 23461314 - 23461254
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  23461314 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 23461254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 26892655 - 26892715
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  26892655 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 26892715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 26898094 - 26898154
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  26898094 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 26898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 35251687 - 35251747
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  35251687 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 35251747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 39110291 - 39110231
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  39110291 aaccactttggtcctttatgctaggatgaatgtattagagttaagggaccaaaacgaaacc 39110231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 28958012 - 28957959
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaa 70  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28958012 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaa 28957959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 6645712 - 6645772
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  6645712 aaccactttggtcctttatgttaggatgaatgtattagagttaagggatcaaaatgaaacc 6645772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 30785978 - 30785922
Alignment:
Q  21 actttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  30785978 actttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 30785922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 7031996 - 7032053
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  7031996 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 7032053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 15129865 - 15129922
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  15129865 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 15129922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 18904821 - 18904878
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  18904821 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 18904878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 45001244 - 45001301
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  45001244 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 45001301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 27516350 - 27516403
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaa 70  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  27516350 aaccactttggtcctttatgttaggatgaatgtattagagttaagagaccaaaa 27516403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 7182541 - 7182600
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||    
T  7182541 aaccactttggtcctttatgttag-atgactgtattagagttaagggaccaaaacgaaacc 7182600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 38578076 - 38578020
Alignment:
Q  21 actttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  38578076 actttggtcctttatgttaggatgaatgtattcgagttaagggaccaaaatgaaacc 38578020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 36099515 - 36099572
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  36099515 aaccactttggtcctttatgttaggatgaatgtattagagttaa-gaaccaaaacgaaa 36099572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 31309546 - 31309606
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||| |||| ||||||||||| ||||| ||||||| |||||||| ||||||    
T  31309546 aaccactttggtccattatgttaggatgaatatattatagttaagagaccaaaatgaaacc 31309606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 28958114 - 28958173
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaacc 115  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  28958114 agttaagggaccaaaacgaaaccaaaaaa-taagttaagggaccaaaagagtaattaaacc 28958173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 7031864 - 7031802
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||| |||||    
T  7031864 agttaagggaccaaaacgaaaccaaaaaa-taagttaagggaccaaaagagtaattaagcctaa 7031802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 27516218 - 27516157
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||| ||||    
T  27516218 agttaagggaccaaaacgaaaccaaaaaa-taagttaagggaccaaaagagtaattaagccta 27516157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 18904658 - 18904595
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaacctaat 119  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||    
T  18904658 agttaagggaccaaaacgaaac-aaaaaaataagttaagggaccaaaagagtaattaagcctaat 18904595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 7032155 - 7032216
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaaccta 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||    
T  7032155 agttaagggaccaaaacgaaac-taaaaaataagttaagggaccaaaagagtaattaagccta 7032216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 31309795 - 31309828
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||||||| |||||    
T  31309795 taagttaagggaccaaaagagtaattaagcctaa 31309828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 38578210 - 38578243
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||||||| |||||    
T  38578210 taagttaagggaccaaaagagtaattaagcctaa 38578243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 26892873 - 26892905
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||| ||||||||||||    
T  26892873 taagttaagggaccaaaagaataattaaaccta 26892905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 26898312 - 26898344
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||| ||||||||||||    
T  26898312 taagttaagggaccaaaagaataattaaaccta 26898344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 27516569 - 27516601
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  27516569 taagttaagggaccaaaagagtaattaagccta 27516601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 35589194 - 35589226
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  35589194 taagttaagggaccaaaagagtaattaagccta 35589226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 53; Significance: 2e-21; HSPs: 7)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 5727 - 5787
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  5727 aaccactttggtcctttattttaggatgaatgtattagagttaagggaccaaaatgaaacc 5787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 9942 - 10002
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  9942 aaccactttggtcctttattttaggatgaatgtattagagttaagggaccaaaatgaaacc 10002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 14157 - 14217
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  14157 aaccactttggtcctttattttaggatgaatgtattagagttaagggaccaaaatgaaacc 14217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 18372 - 18432
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  18372 aaccactttggtcctttattttaggatgaatgtattagagttaagggaccaaaatgaaacc 18432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 22587 - 22647
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  22587 aaccactttggtcctttattttaggatgaatgtattagagttaagggaccaaaatgaaacc 22647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 26802 - 26862
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  26802 aaccactttggtcctttattttaggatgaatgtattagagttaagggaccaaaatgaaacc 26862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 1512 - 1565
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaa 70  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  1512 aaccactttggtcctttattttaggatgaatgtatttgagttaagggaccaaaa 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 144966 - 144906
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  144966 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 144906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 4881302 - 4881362
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  4881302 aaccactttggtcctttatgctaggatgaatgtattagagttaagggaccaaaacgaaacc 4881362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 5881686 - 5881626
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  5881686 aaccactttggtcctttatgttcggatgaatgtattagagttaagggaccaaaacgaaacc 5881626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 6513358 - 6513418
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6513358 aaccactttagtcctttatgttaggatgaatgtattagagttaagggaccaaaacgaaacc 6513418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 9237592 - 9237532
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  9237592 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 9237532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 35181967 - 35181882
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaa 102  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||        ||||||||||||||||||    
T  35181967 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacaaaaaaaataagttaagggaccaaaa 35181882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 41387331 - 41387391
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  41387331 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 41387391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 21524524 - 21524466
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  21524524 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaa 21524466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 162530 - 162470
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  162530 aaccactttggtcctttatgttaggatgaatgtattagagttaaaggaccaaaatgaaacc 162470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 1259862 - 1259802
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  1259862 aaccactttggtcctttatgttatgatgaatgtattagagttaagggaccaaaatgaaacc 1259802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 12850211 - 12850151
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  12850211 aaccactttggtccattatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 12850151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 23152464 - 23152516
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaa 69  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23152464 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaa 23152516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 5821921 - 5821864
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  5821921 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 5821864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 5876651 - 5876594
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  5876651 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 5876594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 45467620 - 45467677
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  45467620 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 45467677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 11901362 - 11901309
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaa 70  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  11901362 aaccactttggtcatttatgttaggatgaatgtattagagttaagggaccaaaa 11901309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 10397851 - 10397910
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  10397851 aaccactttggtc-tttatgttaggatgaatgtattagagttaagggaccgaaacgaaacc 10397910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 10398565 - 10398506
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  10398565 aaccactttggtc-tttatgttaggatgaatgtattagagttaagggaccgaaacgaaacc 10398506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 14055036 - 14054977
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||||||||| |||||    
T  14055036 aacctctttgatcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaac 14054977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 42984791 - 42984732
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| |||||    
T  42984791 aaccactttggtcctttatgttaagatgaatgtattagagttaagggatcaaaatgaaac 42984732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 3317906 - 3317849
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  3317906 aaccactttggtcctttacgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 3317849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 4325785 - 4325842
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  4325785 aaccactttggtcctttatgttaggatgaatgtattacagttaa-ggaccaaaacgaaa 4325842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 35103467 - 35103409
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  35103467 aacccctttagtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaa 35103409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 12823484 - 12823431
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaac 71  Q
    ||||||||||| ||||||| ||||||||||||||||| |||||| ||||||||||    
T  12823484 aaccactttggccctttatgttaggatgaatgtattatagttaa-ggaccaaaac 12823431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 29802382 - 29802439
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| ||||||||||||||||| | |||| ||||||||| ||||    
T  29802382 aaccactttggtcctttatgttaggatgaatgtattatatttaa-ggaccaaaatgaaa 29802439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 4325973 - 4326035
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||| |||||    
T  4325973 agttaagggaccaaaacgaaaccaaaaaa-taagttaagggaccaaaagagtaattaagcctaa 4326035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 29802219 - 29802157
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||| |||||    
T  29802219 agttaagggaccaaaacgaaaccaaaaaa-taagttaagggaccaaaagagtaattaagcctaa 29802157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 116
Target Start/End: Original strand, 6513576 - 6513607
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacct 116  Q
    ||||||||||||||||||||||||||||||||    
T  6513576 taagttaagggaccaaaagagtaattaaacct 6513607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 29802573 - 29802632
Alignment:
Q  58 taagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaacctaa 118  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||| |||||    
T  29802573 taagggaccaaaacgaaaccaaaaaa-taagttaagggaccaaaagagtaattaagcctaa 29802632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 41387580 - 41387612
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  41387580 taagttaagggaccaaaagagtaattaagccta 41387612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 23351166 - 23351226
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  23351166 aaccactttggtcctttatgttaggatgaatgtattagagttaagtgaccaaaacgaaacc 23351226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 39383967 - 39384052
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaa 102  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||        ||||||||||||||||||    
T  39383967 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacaaaaaaaataagttaagggaccaaaa 39384052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 8735987 - 8735931
Alignment:
Q  21 actttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  8735987 actttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 8735931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 36782864 - 36782779
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaa 102  Q
    ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  36782864 aaccactttggtcatttatgttcggatgaatgtattagagttaagggaccaaaacgaaacaaaaaaagtaagttaagggaccaaaa 36782779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 11687254 - 11687195
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||    
T  11687254 aaccactttgatcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaac 11687195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 36701549 - 36701608
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  36701549 aaccactttggtcctttatgttatgatgaatgtattagagttaagggaccaaaatgaaac 36701608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 22207592 - 22207535
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  22207592 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 22207535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 38340893 - 38340947
Alignment:
Q  23 tttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  38340893 tttggtcctttatgttagaatgaatgtattagagttaagggaccaaaacgaaacc 38340947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 19069847 - 19069787
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||||||||| ||||||    
T  19069847 aaccactttggtcctttatgttaggatgaatgtaataaagttaagggaccaaaatgaaacc 19069787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 22151728 - 22151674
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacg 72  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  22151728 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacg 22151674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 24417348 - 24417289
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||||||| |||||    
T  24417348 aaccactttggtcctttatgttataatgaatgtattagagttaagggaccaaaatgaaac 24417289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 45057672 - 45057729
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    |||||||||| |||||||| |||| |||||| |||||||||||| ||||||||||||||    
T  45057672 aaccactttgatcctttatgttagaatgaatctattagagttaa-ggaccaaaacgaaa 45057729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 45057571 - 45057538
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||||||| |||||    
T  45057571 taagttaagggaccaaaagagtaattaagcctaa 45057538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 19105627 - 19105659
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  19105627 taagttaagggaccaaaagagtaattaagccta 19105659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 6132055 - 6132140
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaa 102  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||        ||||||||||||||||||    
T  6132055 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacaaaaaaaataagttaagggaccaaaa 6132140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 6172208 - 6172148
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  6172208 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 6172148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 36442351 - 36442411
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  36442351 aaccactttggtcttttatattaggatgaatgtattagagttaagggaccaaaatgaaacc 36442411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 7278047 - 7278106
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  7278047 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaac 7278106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 14858442 - 14858389
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaa 70  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14858442 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaa 14858389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 9438428 - 9438488
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  9438428 aaccactttgatcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 9438488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 17094394 - 17094454
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  17094394 aaccactttggtcctttatgttaggatgaatgtattagagttaagggactaaaatgaaacc 17094454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 42382036 - 42381980
Alignment:
Q  21 actttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  42382036 actttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 42381980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 13476823 - 13476882
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||    
T  13476823 aaccactttggtcctttatgttaggatgaatgtattagagttaagggatcaaaatgaaac 13476882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 22803452 - 22803372
Alignment:
Q  22 ctttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaa 102  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||        ||||||||||||||||||    
T  22803452 ctttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacaaaaaaaataagttaagggaccaaaa 22803372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 1156155 - 1156212
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  1156155 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 1156212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 4349741 - 4349684
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  4349741 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 4349684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 10503822 - 10503882
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  10503822 aaccactttagtcctttatgttaggatgaatgtattagagttaaggaaccaaaatgaaacc 10503882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 24100077 - 24100129
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaa 69  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  24100077 aaccactttggtccattatgttaggatgaatgtattagagttaagggaccaaa 24100129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 42026531 - 42026471
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||||    
T  42026531 aaccactttggtcctctatgttaggatgaatgtattagagttaagagaccaaaatgaaacc 42026471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 43476248 - 43476308
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||||||| ||||||    
T  43476248 aaccactttggtcctttatgttaggatgaatgcaatagagttaagggaccaaaatgaaacc 43476308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 29906208 - 29906149
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||    
T  29906208 aaccactttggtcctttatgttaggatgaatgtattatagttaagggatcaaaatgaaac 29906149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 42381450 - 42381391
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||||||||| |||||    
T  42381450 aacctctttgatcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaac 42381391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 8127720 - 8127663
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  8127720 aaccactttggtcctttatgttaggatgaatgtattagagttaa-agaccaaaacgaaa 8127663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 10570194 - 10570251
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  10570194 aaccactttggtcttttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 10570251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 37812422 - 37812475
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaac 71  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  37812422 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaac 37812475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 20841781 - 20841736
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagg 62  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  20841781 aaccactttggtcctttatgttaggattaatgtattagagttaagg 20841736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 22803589 - 22803651
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||| |||||    
T  22803589 agttaagggaccaaaacgaaaccaaaaaa-taagttaagggaccaaaagagtaattaagcctaa 22803651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 37812290 - 37812228
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||| |||||    
T  37812290 agttaagggaccaaaacgaaaccaaaaaa-taagttaagggaccaaaagagtaattaagcctaa 37812228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 42026663 - 42026725
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||| |||||    
T  42026663 agttaagggaccaaaacgaaaccaaaaaa-taagttaagggaccaaaagagtaattaagcctaa 42026725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 119
Target Start/End: Complemental strand, 16792001 - 16791967
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacctaat 119  Q
    |||||||||||||||||||||||||||| ||||||    
T  16792001 taagttaagggaccaaaagagtaattaagcctaat 16791967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 14858603 - 14858636
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||||||| |||||    
T  14858603 taagttaagggaccaaaagagtaattaagcctaa 14858636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 21289558 - 21289591
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||||||| |||||    
T  21289558 taagttaagggaccaaaagagtaattaagcctaa 21289591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 42026313 - 42026281
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  42026313 taagttaagggaccaaaagagtaattaagccta 42026281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 43476466 - 43476498
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  43476466 taagttaagggaccaaaagagtaattaagccta 43476498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 11822785 - 11822845
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  11822785 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 11822845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 32617464 - 32617404
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  32617464 aaccactttggtcctttatgctaggatgaatgtattagagttaagggaccaaaacgaaacc 32617404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 51949522 - 51949582
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  51949522 aaccactttggtcctttatgttatgatgaatgtattagagttaagggaccaaaacgaaacc 51949582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 55013930 - 55013870
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  55013930 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 55013870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 26107781 - 26107840
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  26107781 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaac 26107840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 36611173 - 36611231
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  36611173 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaa 36611231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 19630954 - 19631014
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  19630954 aaccactttgatcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 19631014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 23330001 - 23330061
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  23330001 aaccactttggtcctttatgttaggatgaatgtattagagttaagggatcaaaatgaaacc 23330061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 25764553 - 25764638
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaa 102  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||        ||||||||||||||||||    
T  25764553 aaccactttggtcctttatgttaggatgaatgtattagagttaaggaaccaaaatgaaacaaaaaaaataagttaagggaccaaaa 25764638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 52766397 - 52766341
Alignment:
Q  21 actttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  52766397 actttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 52766341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 9203429 - 9203482
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaa 70  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  9203429 aaccactttggtcctttattttaggatgaatgtatttgagttaagggaccaaaa 9203482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 9207648 - 9207701
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaa 70  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  9207648 aaccactttggtcctttattttaggatgaatgtatttgagttaagggaccaaaa 9207701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 27509795 - 27509855
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||| || |||||  ||||||||||||||||||||||||||||||||||||||||    
T  27509795 aaccactttgatcttttatgctaggatgaatgtattagagttaagggaccaaaacgaaacc 27509855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 31208362 - 31208303
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| |||||    
T  31208362 aaccactttggtcctttttgttagcatgaatgtattagagttaagggaccaaaatgaaac 31208303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 39899361 - 39899301
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||||||||  || ||||||||||||||||||||| |||||||| ||||||    
T  39899361 aaccactttggtcctttatgctatgatgaatgtattagagttaagagaccaaaatgaaacc 39899301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 32155701 - 32155744
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaa 60  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  32155701 aaccactttggtcctttatgttaggatgaatgtattagagttaa 32155744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 9100339 - 9100286
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaa 70  Q
    |||||||| ||||||| || || |||||||||||||||| ||||||||||||||    
T  9100339 aaccacttaggtccttaatgttgggatgaatgtattagatttaagggaccaaaa 9100286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 23329840 - 23329811
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaac 114  Q
    ||||||||||||||||||||||||||||||    
T  23329840 taagttaagggaccaaaagagtaattaaac 23329811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 25764772 - 25764805
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||| |||||||||||||||||||||||    
T  25764772 taagttaaggaaccaaaagagtaattaaacctaa 25764805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 39899143 - 39899110
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||||||| |||||    
T  39899143 taagttaagggaccaaaagagtaattaagcctaa 39899110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 11822696 - 11822664
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  11822696 taagttaagggaccaaaagagtaattaagccta 11822664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 19631171 - 19631203
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  19631171 taagttaagggaccaaaagagtaattaagccta 19631203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 39899511 - 39899543
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  39899511 taagttaagggaccaaaagagtaattaagccta 39899543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 52766183 - 52766151
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  52766183 taagttaagggaccaaaagagtaattaagccta 52766151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 1070080 - 1070020
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1070080 aaccacttttgtcctttatgttaggatgaatgtattagagttaagggaccaaaacgaaacc 1070020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 2800751 - 2800811
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  2800751 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaaggaaacc 2800811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 6950955 - 6951015
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  6950955 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 6951015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 18024844 - 18024784
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  18024844 aaccactttggtcctttatgctaggatgaatgtattagagttaagggaccaaaacgaaacc 18024784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 28004514 - 28004454
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  28004514 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 28004454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 30385429 - 30385369
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  30385429 aaccactttggtcctttatgctaggatgaatgtattagagttaagggaccaaaacgaaacc 30385369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 40941729 - 40941669
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  40941729 aaccactttggtcctttatgctaggatgaatgtattagagttaagggaccaaaacgaaacc 40941669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 42592679 - 42592619
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  42592679 aaccactttggtcctttatgctaggatgaatgtattagagttaagggaccaaaacgaaacc 42592619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 38771485 - 38771426
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  38771485 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaac 38771426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 28033291 - 28033233
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  28033291 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaa 28033233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 1364515 - 1364455
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  1364515 aaccactttggtcctttatgttaggatgaatgtattaaagttaagggaccaaaatgaaacc 1364455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 10817672 - 10817732
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  10817672 aaccactttggtcctttatgctaggatgaatgtattagaggtaagggaccaaaacgaaacc 10817732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 12061819 - 12061875
Alignment:
Q  21 actttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  12061819 actttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 12061875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 19794643 - 19794583
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  19794643 aaccactttggtcctttatgttaggatgaatgtattagagttcagggaccaaaatgaaacc 19794583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 22977171 - 22977231
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  22977171 aaccactttggtcttttatgttaggatgaatgtattaaagttaagggaccaaaacgaaacc 22977231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 25629653 - 25629713
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  25629653 aaccactttggtcctttatgttaggatgaatgtattagagttaaggtaccaaaatgaaacc 25629713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 17934015 - 17934073
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  17934015 aaccactttggtcctttatgttag-atgaatgtattagagttaagggaccaaaacgaaac 17934073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 18270844 - 18270785
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaac 76  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  18270844 aaccactttggtcctttatgttatgatgaatgtattagagttaagggaccaaaatgaaac 18270785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 51891167 - 51891110
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  51891167 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 51891110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 53204652 - 53204709
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  53204652 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaacgaaa 53204709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 30267639 - 30267581
Alignment:
Q  16 aaaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  30267639 aaaccactttggtcctttatgttaggatgaatgtattacagttaa-ggaccaaaacgaaa 30267581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 23090457 - 23090517
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||||    
T  23090457 aaccactttggtcttttatgttaggatgaatgtattagagttaaggaatcaaaatgaaacc 23090517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 42213399 - 42213339
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||| | ||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  42213399 aaccactttggacttttatgttaggatgaatgtattaaagttaagggaccaaaatgaaacc 42213339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 7588399 - 7588444
Alignment:
Q  32 ttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||    
T  7588399 ttatgttatgatgaatgtattagagttaagggaccaaaacgaaacc 7588444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 51891299 - 51891360
Alignment:
Q  55 agttaagggaccaaaacgaaaccnnnnnnntaagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  51891299 agttaagggaccaaaacgaaaccaaaaaa-taagttaagggaccaaaagagtaattaaaccta 51891360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Complemental strand, 38771267 - 38771237
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacc 115  Q
    |||||||||||||||||||||||||||||||    
T  38771267 taagttaagggaccaaaagagtaattaaacc 38771237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 12061654 - 12061621
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||||||| |||||    
T  12061654 taagttaagggaccaaaagagtaattaagcctaa 12061621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 23090633 - 23090662
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaac 114  Q
    ||||||||||||||||||||||||||||||    
T  23090633 taagttaagggaccaaaagagtaattaaac 23090662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 19794425 - 19794393
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||| ||||||||||||||||||||||||    
T  19794425 taagttaaaggaccaaaagagtaattaaaccta 19794393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 28004296 - 28004264
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  28004296 taagttaagggaccaaaagagtaattaagccta 28004264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 99847 - 99794
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaa 70  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  99847 aaccactttggtcctttatgttaggatgaatgtattagagttaagggaccaaaa 99794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 100008 - 100041
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacctaa 118  Q
    |||||||||||||||||||||||||||| |||||    
T  100008 taagttaagggaccaaaagagtaattaagcctaa 100041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 8025 - 8085
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  8025 aaccactttgatcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 8085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 27864 - 27920
Alignment:
Q  21 actttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  27864 actttggtcctttatgttaggatgaatgtattagagttaagggaccaaaaggaaacc 27920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 10579538 - 10579482
Alignment:
Q  21 actttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  10579538 actttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 10579482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 11653067 - 11653127
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  11653067 aaccactttggtcctttatgataggatgaatgtattagagttaagggaccaaaatgaaacc 11653127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 14499504 - 14499444
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  14499504 aaccactttggttctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 14499444  T

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Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 17738445 - 17738505
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  17738445 aaccactttgatcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 17738505  T

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Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 52051421 - 52051481
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  52051421 aaccgctttggtcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaacc 52051481  T

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Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 17750405 - 17750347
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  17750405 aaccactttgatcctttatgttaggatgaatgtattagagttaagggaccaaaatgaaa 17750347  T

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Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 7204174 - 7204115
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||    
T  7204174 aaccactttggtcctttatgttag-atgactgtattagagttaagggaccaaaacgaaacc 7204115  T

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Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 13834902 - 13834947
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagg 62  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  13834902 aaccactttggtcctttatgttaggatgaatgtattagagttaagg 13834947  T

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Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 48225211 - 48225264
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaa 70  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||    
T  48225211 aaccactttagtcgtttatgttaggatgaatgtattagagttaagggacaaaaa 48225264  T

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Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 116
Target Start/End: Complemental strand, 14499286 - 14499255
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacct 116  Q
    ||||||||||||||||||||||||||||||||    
T  14499286 taagttaagggaccaaaagagtaattaaacct 14499255  T

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Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Original strand, 28999458 - 28999488
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacc 115  Q
    |||||||||||||||||||||||||||||||    
T  28999458 taagttaagggaccaaaagagtaattaaacc 28999488  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Complemental strand, 52051260 - 52051230
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaacc 115  Q
    |||||||||||||||||||||||||||||||    
T  52051260 taagttaagggaccaaaagagtaattaaacc 52051230  T

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Target: scaffold0352 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 11265 - 11325
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaacc 77  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||||||    
T  11265 aaccactttggtcctttatgtcaggatgaatgtattagagttaagtgaccaaaatgaaacc 11325  T

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Target: scaffold0352; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 11452 - 11484
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  11452 taagttaagggaccaaaagagtaattaagccta 11484  T

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Target: scaffold0180 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 18528 - 18585
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  18528 aaccactttggtcctttatgttaggatgaatgtattagagttaa-ggaccaaaatgaaa 18585  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 6863 - 6920
Alignment:
Q  17 aaccactttggtcctttatattaggatgaatgtattagagttaagggaccaaaacgaaa 75  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  6863 aaccactttggtcctttatgttaggatgaatgtattggagttaa-ggaccaaaatgaaa 6920  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 6702 - 6670
Alignment:
Q  85 taagttaagggaccaaaagagtaattaaaccta 117  Q
    |||||||||||||||||||||||||||| ||||    
T  6702 taagttaagggaccaaaagagtaattaagccta 6670  T

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Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 5032 - 5081
Alignment:
Q  20 cactttggtcctttatattaggatgaatgtattagagttaagggaccaaa 69  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  5032 cactttggtcctttatgttaggatgaatgtatcagagttaagggatcaaa 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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