View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17758_high_30 (Length: 315)

Name: NF17758_high_30
Description: NF17758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17758_high_30
NF17758_high_30
[»] chr3 (3 HSPs)
chr3 (1-297)||(50035537-50035830)
chr3 (148-202)||(30594490-30594544)
chr3 (67-121)||(27948350-27948404)
[»] chr1 (8 HSPs)
chr1 (1-297)||(16263935-16264233)
chr1 (64-297)||(49303962-49304197)
chr1 (7-57)||(38702876-38702926)
chr1 (143-213)||(4108618-4108688)
chr1 (79-121)||(4108709-4108751)
chr1 (67-112)||(3899004-3899049)
chr1 (64-121)||(48912027-48912084)
chr1 (67-112)||(50501554-50501599)
[»] chr7 (11 HSPs)
chr7 (1-301)||(6483740-6484033)
chr7 (1-301)||(2946692-2946994)
chr7 (1-301)||(33142098-33142395)
chr7 (2-301)||(37997652-37997959)
chr7 (64-301)||(1503101-1503342)
chr7 (64-297)||(46409127-46409358)
chr7 (148-301)||(47491385-47491546)
chr7 (148-213)||(35240670-35240735)
chr7 (78-123)||(32838213-32838258)
chr7 (64-121)||(35240593-35240650)
chr7 (144-213)||(26048886-26048955)
[»] chr4 (2 HSPs)
chr4 (1-297)||(56395714-56396010)
chr4 (1-271)||(6230293-6230561)
[»] chr5 (8 HSPs)
chr5 (1-297)||(41196241-41196536)
chr5 (67-301)||(35471452-35471684)
chr5 (148-297)||(36151531-36151689)
chr5 (148-203)||(16050413-16050468)
chr5 (68-127)||(36151715-36151774)
chr5 (64-120)||(18924479-18924535)
chr5 (146-215)||(7509658-7509727)
chr5 (64-125)||(16050484-16050545)
[»] chr6 (2 HSPs)
chr6 (1-301)||(14799681-14799989)
chr6 (64-301)||(26420546-26420792)
[»] chr2 (3 HSPs)
chr2 (1-297)||(23988498-23988795)
chr2 (1-297)||(29100200-29100499)
chr2 (82-127)||(2280180-2280225)
[»] chr8 (6 HSPs)
chr8 (67-296)||(2706824-2707053)
chr8 (64-301)||(35971785-35972024)
chr8 (143-213)||(7217014-7217084)
chr8 (64-121)||(14109669-14109726)
chr8 (241-297)||(7217129-7217185)
chr8 (58-123)||(32966824-32966889)
[»] scaffold0015 (2 HSPs)
scaffold0015 (143-297)||(35611-35770)
scaffold0015 (68-123)||(35801-35854)


Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 50035537 - 50035830
Alignment:
Q  1 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50035537 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaatagatctccc 50035636  T
Q  101 acgggaggagacattaaaaaagactgannnnnnnnnnnnnnnataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataa 200  Q
    ||||||||||||||||||||||| |||               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50035637 acgggaggagacattaaaaaagattga---tttttttttttaataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataa 50035733  T
Q  201 tccttctacactatannnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgattg 297  Q
    |||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  50035734 tccttctacactatattttttttttcatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttgctgcactttctgttgattg 50035830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 30594544 - 30594490
Alignment:
Q  148 aaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataatc 202  Q
    |||||||| ||||||||| ||||||||||  |||||||||||||||| |||||||    
T  30594544 aaaaatgatatgtgttgctgttagattgataaagaacactgatcttatcataatc 30594490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 27948350 - 27948404
Alignment:
Q  67 gccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaa 121  Q
    |||||||  ||||| |||||||||||||||||| |||| |||| |||||||||||    
T  27948350 gccgttttcggtagcagacttgaataggtctcctacggtaggaaacattaaaaaa 27948404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 16263935 - 16264233
Alignment:
Q  1 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16263935 tgtctccatcattatcatcgtcgtccataacatcatcatggttaaacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 16264034  T
Q  101 acgggaggagacattaaaaaagactg--annnnnnnnnnnnnnnataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccat 198  Q
    ||||||||||||||||||||||||||                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16264035 acgggaggagacattaaaaaagactgttttttttatttttatatataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccat 16264134  T
Q  199 aatccttctacactatannnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgattg 297  Q
    |||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  16264135 aatccttctacactatattttttttttcatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttgctgcactttctgttgattg 16264233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 297
Target Start/End: Original strand, 49303962 - 49304197
Alignment:
Q  64 ggcgccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaagactgannnnnnnnnnnnnnn-ataacaaaaatgacatgtgt 162  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||||                ||||||| ||||| ||||||    
T  49303962 ggcgccgtttatggtaggagacttgaatagatcttccacggtaggagatattaaaaaagactgatttttttttttttaatataacaataatgatatgtgt 49304061  T
Q  163 tgcggttagattgacgaagaacactgatcttaccataatccttctacactatannnnnnnnnc-catttggtagatctaagagagagacgtgtactgtag 261  Q
    |||||||||||||| |||||||| | ||| ||||||||||||||| ||||| |           ||||||||| |||||||||||||| |||||||||||    
T  49304062 tgcggttagattgatgaagaacattaatcataccataatccttctgcactagatttttttttttcatttggtatatctaagagagagatgtgtactgtag 49304161  T
Q  262 caactccattgttgttactgcactttttgttgattg 297  Q
    |||||||||||||||| ||||||||| |||||||||    
T  49304162 caactccattgttgttgctgcactttctgttgattg 49304197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 38702876 - 38702926
Alignment:
Q  7 catcattatcatcgtcgtccataacatcatcatggttagacttagagacat 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38702876 catcattatcatcgtcgtccataacatcatcatggttagacttagagacat 38702926  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 4108688 - 4108618
Alignment:
Q  143 ataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataatccttctacacta 213  Q
    |||||||||||||||  |||  | |||||||||| |||||||| ||||||||| ||||||| || ||||||    
T  4108688 ataacaaaaatgacacttgtcaccgttagattgatgaagaacattgatcttactataatccctccacacta 4108618  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 4108751 - 4108709
Alignment:
Q  79 aggagacttgaataggtctcccacgggaggagacattaaaaaa 121  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||    
T  4108751 aggagacttaaataggtctcctacggtaggagacattaaaaaa 4108709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 3899004 - 3899049
Alignment:
Q  67 gccgtttatggtaggagacttgaataggtctcccacgggaggagac 112  Q
    |||||||| |||||||||| ||||||||||||| |||| |||||||    
T  3899004 gccgtttaaggtaggagacgtgaataggtctcctacggtaggagac 3899049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 48912084 - 48912027
Alignment:
Q  64 ggcgccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaa 121  Q
    ||||||||||  ||||||||||  |||||||||||| || | ||||||||||||||||    
T  48912084 ggcgccgtttccggtaggagacgagaataggtctcctactgtaggagacattaaaaaa 48912027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 50501599 - 50501554
Alignment:
Q  67 gccgtttatggtaggagacttgaataggtctcccacgggaggagac 112  Q
    |||||||| |||||||||| ||||||||||||| |||| |||||||    
T  50501599 gccgtttaaggtaggagacgtgaataggtctcctacggtaggagac 50501554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 6483740 - 6484033
Alignment:
Q  1 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 100  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483740 tgtctccattattatcatcgtcgtccataacatcatcatagttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 6483839  T
Q  101 acgggaggagacattaaaaaagactgannnnnnnnnnnnnnnataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataa 200  Q
    || ||||||||||||||||||||||||               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483840 acaggaggagacattaaaaaagactga-----ttttttttatataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataa 6483934  T
Q  201 tccttctacactatannnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgattgtta 300  Q
    |||||||||||||||          ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  6483935 tccttctacactatatttttttt--catttggtagatctaagagagagacgtgtactgtagcaacttcattgttgttgctgcactttctgttgattgtta 6484032  T

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Target: chr7; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 2946692 - 2946994
Alignment:
Q  1 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2946692 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 2946791  T
Q  101 acgggaggagacattaaaaaagactg-annnnnnnnnnnnnnnataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccata 199  Q
    ||||||||||||||||||||||||||                 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2946792 acgggaggagacattaaaaaagactgttttatttatttattttataacaaaaatgacatgtgttgcggttagattgacgaaaaacactgatcttaccata 2946891  T
Q  200 atccttctacactata-nnnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgattgt 298  Q
    ||||||||||||||||           ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  2946892 atccttctacactatatatatttttttcatttggtagatctaagcgagagacgtgtactgtagcaactccattgttgttgctgcactttctgttgattgt 2946991  T
Q  299 tat 301  Q
    |||    
T  2946992 tat 2946994  T

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Target: chr7; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 33142098 - 33142395
Alignment:
Q  1 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  33142098 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggtgccgtttatggtaggagacttgaatagatctccc 33142197  T
Q  101 acgggaggagacattaaaaaagactgannnnnnnnnnnnnnnataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataa 200  Q
    |||||||||||| |||||||||| |||               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33142198 acgggaggagactttaaaaaagattga--ttttttttttttaataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataa 33142295  T
Q  201 tccttctacactatannnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgattgtta 300  Q
    |||||||||||||||          ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  33142296 tccttctacactatattttttttt-catctggtagatctaagagagagacgtgtactgtagcaactccattgttgttgctgcactttctgttgattgtta 33142394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 2 - 301
Target Start/End: Complemental strand, 37997959 - 37997652
Alignment:
Q  2 gtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37997959 gtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccca 37997860  T
Q  102 cgggaggagacattaaaaaagactga----nnnnnnnnnnnnnnnataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttacca 197  Q
    ||||||||||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37997859 cgggaggagacattaaaaaagactgatttttttttttttttttttataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttacca 37997760  T
Q  198 taatccttctacacta----tannnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttg 293  Q
    ||||||||||||||||    |           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  37997759 taatccttctacactattttttttttttttttcatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttgctgcactttctgttg 37997660  T
Q  294 attgttat 301  Q
    ||||||||    
T  37997659 attgttat 37997652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 64 - 301
Target Start/End: Complemental strand, 1503342 - 1503101
Alignment:
Q  64 ggcgccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaagactgannnnnnnnnnnnnnnataacaaaaatgacatgtgtt 163  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||                ||||||||||||||||||||    
T  1503342 ggcgccgtttatggtaggagacttgaataggtctcccacagtaggagacattaaaaaatactgatttttttttttttttttaacaaaaatgacatgtgtt 1503243  T
Q  164 gcggttagattgacgaagaacactgatcttaccataatccttctacacta----tannnnnnnnnccatttggtagatctaagagagagacgtgtactgt 259  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||    ||          ||||||||||||||||||||||||||||||||||    
T  1503242 gcggttagattgacgaaaaacactgatcttaccataatccctctacactagatttatttattttttcatttggtagatctaagagagagacgtgtactgt 1503143  T
Q  260 agcaactccattgttgttactgcactttttgttgattgttat 301  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  1503142 agcaactccattgttgttgctgcactttctgttgattgttat 1503101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 64 - 297
Target Start/End: Complemental strand, 46409358 - 46409127
Alignment:
Q  64 ggcgccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaagactgannnnnnnnnnnnnnnataacaaaaatgacatgtgtt 163  Q
    ||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||||||               |||||||||||| ||||||||    
T  46409358 ggcgccgtttatggtaggagacttgaataggtctctcacagtaggagacattaaaaa-gactgattttttttt------ataacaaaaatgtcatgtgtt 46409266  T
Q  164 gcggttagattgacgaagaacactgatcttaccataatccttctacactatannnnnnnnnccatttggtagatcta------agagagagacgtgtact 257  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||| |          |||||||||||||||      ||||||||||||||| |    
T  46409265 gcggttagattgacgaagaacactgatcttaccataatccctccacactagattttttttt-catttggtagatctaagagagagagagagacgtgtatt 46409167  T
Q  258 gtagcaactccattgttgttactgcactttttgttgattg 297  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  46409166 gtagcaactccattgttgttgctgcactttctgttgattg 46409127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 301
Target Start/End: Complemental strand, 47491546 - 47491385
Alignment:
Q  148 aaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataatccttctacactatannnnnnnnnc--------catttggtagatct 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |                  ||||||||||||||    
T  47491546 aaaaatgacatgtgttgcggttagattgacgaagaacactgatcttattataatccctctacactagattttttttttttttttttcatttggtagatct 47491447  T
Q  240 aagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgattgttat 301  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||| |||||||||||||    
T  47491446 aagagagagacatgtactgtagcaactccattgttgttggtgcactttctgttgattgttat 47491385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 35240670 - 35240735
Alignment:
Q  148 aaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataatccttctacacta 213  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||||||| || || ||||||    
T  35240670 aaaaatgacatgtgttgccgttagattgacaaagaacactaatcttaccataagccctccacacta 35240735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 32838213 - 32838258
Alignment:
Q  78 taggagacttgaataggtctcccacgggaggagacattaaaaaaga 123  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||||    
T  32838213 taggagacttgaataggtctcctacggtaggagacattataaaaga 32838258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 35240593 - 35240650
Alignment:
Q  64 ggcgccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaa 121  Q
    ||||||||||  ||||||||||||||||| |||||| |||| || |||||||||||||    
T  35240593 ggcgccgtttccggtaggagacttgaatatgtctcctacggtagaagacattaaaaaa 35240650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 26048886 - 26048955
Alignment:
Q  144 taacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataatccttctacacta 213  Q
    ||||||||||||||| |||| |  ||||||||| |||||||| || |||||| ||||||| || ||||||    
T  26048886 taacaaaaatgacatatgttactattagattgatgaagaacattggtcttactataatccctccacacta 26048955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 56395714 - 56396010
Alignment:
Q  1 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  56395714 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggtgtcgtttatggtaggagacttgaataggtctccc 56395813  T
Q  101 acgggaggagacattaaaaaagactgannnnnnnnnnnnnnnataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataa 200  Q
    ||||||||||||||||||||| |||||               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56395814 acgggaggagacattaaaaaatactga-atttttttttttttataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataa 56395912  T
Q  201 tccttctacactata-nnnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgattg 297  Q
    |||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  56395913 tccttctacactatatttttttttttcatttggtagatctaagagagagacgtgtactatagcaactccattgttgttgctgcactttctgttgattg 56396010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 6230293 - 6230561
Alignment:
Q  1 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||| |||||||    
T  6230293 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagatataatctcggcgtcgtttatggtaggaaacttgaataagtctccc 6230392  T
Q  101 acgggaggagacattaaaaaagactga-nnnnnnnnnnnnnnnataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccata 199  Q
    |||||||||||||||||||||||||||                ||||||||||| ||||||||  |||||||||| ||||||||||||||||||||||||    
T  6230393 acgggaggagacattaaaaaagactgattttttatttttttttataacaaaaattacatgtgt--cggttagatttacgaagaacactgatcttaccata 6230490  T
Q  200 atccttctacactatannnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaactccatt 271  Q
    ||| ||||||||| |           |||||||||||| |||||||||||||||||||||||||||||||||    
T  6230491 atctttctacact-ttttttttttttcatttggtagatataagagagagacgtgtactgtagcaactccatt 6230561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 3e-97; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 41196241 - 41196536
Alignment:
Q  1 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41196241 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 41196340  T
Q  101 acgggaggagacattaaaaaagactgannnnnnnnnnnnnnnataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataa 200  Q
    |||| |||||||||||||||||||||                ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41196341 acggaaggagacattaaaaaagactg---tttttttttttttataacaaaaatgacatgtgttgcggttagattgacgaagaacattgatcttaccataa 41196437  T
Q  201 tccttctacac--tatannnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgattg 297  Q
    || ||||||||  ||||          ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  41196438 tctttctacactatatattttttttttcatttggtagatctaagagagagacgtgtactgtagcaactccattgctgttgctgcactttctgttgattg 41196536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 67 - 301
Target Start/End: Complemental strand, 35471684 - 35471452
Alignment:
Q  67 gccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaagactgannnnnnnnnnnnnnnataacaaaaatgacatgtgttgcg 166  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||                ||||||||||||||||| |||||    
T  35471684 gccgtttatggtaggagacttgaataggtctcccacggtaggagacattaaaaaggactgattttattttttttg--taacaaaaatgacatgtattgcg 35471587  T
Q  167 gttagattgacgaagaacactgatcttaccataatccttctacactatannnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaact 266  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||| |          ||||||||||||||||||||||||| | |||||||||||||    
T  35471586 gttagattgacgaagaacgctgatcttaccataatccctctacactagattttttttttcatttggtagatctaagagagagacatatactgtagcaact 35471487  T
Q  267 ccattgttgttactgcactttttgttgattgttat 301  Q
    ||||||||||| ||||||||| |||||||||||||    
T  35471486 ccattgttgttgctgcactttctgttgattgttat 35471452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 148 - 297
Target Start/End: Complemental strand, 36151689 - 36151531
Alignment:
Q  148 aaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataatccttctacactatannnnnnnnnc---------catttggtagatc 238  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||| |                   |||||||||||||    
T  36151689 aaaaatgacatgtgttgcggttagattgacgaagaacgctgatcttaccataatccctcaacactagatgtttttttttttttttttcatttggtagatc 36151590  T
Q  239 taagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgattg 297  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  36151589 taagagagagacgtgtactgtagcaactccattgttgttgctgcactttctgttgattg 36151531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 16050468 - 16050413
Alignment:
Q  148 aaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataatcc 203  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  16050468 aaaaatgacatgtgttaccgttagattgacaaagaacactgatcttaccataatcc 16050413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 36151774 - 36151715
Alignment:
Q  68 ccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaagactga 127  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  36151774 ccgtttatgataggaaacttgaataggtctcccacggtaggagatattaaaaaagactga 36151715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 18924535 - 18924479
Alignment:
Q  64 ggcgccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaa 120  Q
    ||||||||||  | ||||||||||||||||||||||||||| ||||||| |||||||    
T  18924535 ggcgccgtttccgataggagacttgaataggtctcccacggtaggagactttaaaaa 18924479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 7509727 - 7509658
Alignment:
Q  146 acaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataatccttctacactata 215  Q
    ||||||||||||| |||  |  ||||||||| ||||||||||||||||||  |||||| || ||||||||    
T  7509727 acaaaaatgacatttgtcaccattagattgatgaagaacactgatcttactgtaatccctccacactata 7509658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 16050545 - 16050484
Alignment:
Q  64 ggcgccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaagact 125  Q
    |||| ||||| |||||||||| |||||||||||| | |||| | |||||||||||||| |||    
T  16050545 ggcgtcgtttctggtaggagatttgaataggtcttctacggtatgagacattaaaaaatact 16050484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 5e-96; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 14799681 - 14799989
Alignment:
Q  1 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggt-ctcc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14799681 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtcctcc 14799780  T
Q  100 cacgggaggagacattaaaaaagactga----nnnnnnnnnnnnnnnataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttac 195  Q
    ||||||||||||||||||||||||||||                   |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14799781 cacgggaggagacattaaaaaagactgatttttttttttttttttttataacaaaaatgacatgtgttgtggttagattgacgaagaacactgatcttac 14799880  T
Q  196 cataatccttctacac---tatannnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttactgcactttttgtt 292  Q
    ||||||||||||||||   |||           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  14799881 cataatccttctacactattattttttttttttcatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttgctgcactttctgtt 14799980  T
Q  293 gattgttat 301  Q
    |||||||||    
T  14799981 gattgttat 14799989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 64 - 301
Target Start/End: Complemental strand, 26420792 - 26420546
Alignment:
Q  64 ggcgccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaagactgannnnnnnnnnnnnnnataacaaaaatgacatgtgtt 163  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||                 ||||||||||||||||||||    
T  26420792 ggcgccgtttatggtaggagacttgaataggtctcccacggtaggagacaataaaaaagactgttttctttttttttg--taacaaaaatgacatgtgtt 26420695  T
Q  164 gcggttagattgacgaagaacactgatcttaccataatccttctacacta-----------tannnnnnnnnccatttggtagatctaagagagagacgt 252  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||           |          | |||||||||||||||||||||||| |    
T  26420694 gcggttagattgacgaagaacactgatcttaccataatccctctgcactagtctttttttttttttttttttctatttggtagatctaagagagagacat 26420595  T
Q  253 gtactgtagcaactccattgttgttactgcactttttgttgattgttat 301  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  26420594 gtactatagcaactccattgttgttgctgcactttctgttgattgttat 26420546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 1e-93; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 23988498 - 23988795
Alignment:
Q  1 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23988498 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 23988597  T
Q  101 acgggaggagacattaaaaaagactga-----nnnnnnnnnnnnnnnataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttac 195  Q
    ||||||||||| |||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23988598 acgggaggagaaattaaaaaagactgattttttttttttttttttttataacaaaaatgacatgtgttgcggttagattgacgaagaacac-gatcttac 23988696  T
Q  196 cataatccttctacactatannnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgat 295  Q
    |||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  23988697 cataatccttctacactat---ttttttttcatttggtagatctaagagagagacgtgtactatagcaactccattgttgttgctgcactttctgttgat 23988793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 29100200 - 29100499
Alignment:
Q  1 tgtctccatcattatcatcgtcgtccataacatcatcatggttagacttagagacataatctcggcgccgtttatggtaggagacttgaataggtctccc 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29100200 tgtctccatcattatcatcgtcgtcaataacatcatcatggttagacttagagacataatctcggcaccgtttatggtaggagacttgaataggtctccc 29100299  T
Q  101 acgggaggagacattaaaaaagactg----annnnnnnnnnnnnnnataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttacc 196  Q
    ||||||||||||||||||||| ||||                    |||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  29100300 acgggaggagacattaaaaaaaactggtttttttttttttttttttataacaaaaatgacatgtgttgcggttagattgacgacaaacactgatcttacc 29100399  T
Q  197 ataatccttctacactatannnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgatt 296  Q
    |||||||||||||||||||          ||||||||||||||||| |||||||||||||||||||||||||| |||||||  |||||||| ||||||||    
T  29100400 ataatccttctacactatattttttttt-catttggtagatctaagtgagagacgtgtactgtagcaactccagtgttgttgttgcactttctgttgatt 29100498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 2280225 - 2280180
Alignment:
Q  82 agacttgaataggtctcccacgggaggagacattaaaaaagactga 127  Q
    ||||||||||| |||||| |||| |||||||||||||||| |||||    
T  2280225 agacttgaataagtctcctacggtaggagacattaaaaaatactga 2280180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 67 - 296
Target Start/End: Original strand, 2706824 - 2707053
Alignment:
Q  67 gccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaagactgannnnnnnnnnnnnnnataacaaaaatgacatgtgttgcg 166  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||                |||||||||||||||||||||||    
T  2706824 gccgtttatggcaggagacttgaataggtctcccacggtaggagacattaaaaaagattgatttttttttttttttgtaacaaaaatgacatgtgttgcg 2706923  T
Q  167 gttagattgacgaagaacactgatcttaccataatccttctacactatannnnnnnnnccatttggtagatctaagagagagacgtgtactgtagcaact 266  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |          |||||||| ||||||||||||||||||||||| ||||||||    
T  2706924 gttagattgacgaagaacactgatcttaccataatccctctacactagattttttttttcatttggttgatctaagagagagacgtgtactttagcaact 2707023  T
Q  267 ccattgttgttactgcactttttgttgatt 296  Q
    ||||||||||| ||||| ||| ||||||||    
T  2707024 ccattgttgttgctgcattttctgttgatt 2707053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 64 - 301
Target Start/End: Complemental strand, 35972024 - 35971785
Alignment:
Q  64 ggcgccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaagactgannnnnnnnnnnnnnnataacaaaaatgacatgtgtt 163  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||                |||||||||||||||||||||    
T  35972024 ggcgccgtttatggtaggagacttgaataggtctcctacggtaggagacattaaaaaagactg---tttttttttttttataacaaaaatgacatgtgtt 35971928  T
Q  164 gcggttagattgacgaagaacactgatcttaccataatccttctacactatannnnnnnnnc-----catttggtagatctaagagagagacgtgtactg 258  Q
    |||||||||||||| ||||||||| ||||| ||||||||| ||||||||| |               |||||||||||| |||||||||||| |||||||    
T  35971927 gcggttagattgacaaagaacactaatctttccataatccctctacactagatttttttttttttttcatttggtagatttaagagagagacatgtactg 35971828  T
Q  259 tagcaactccattgttgttactgcactttttgttgattgttat 301  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  35971827 tagcaactccattgttgttgctgcactttctgttgattgttat 35971785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 7217014 - 7217084
Alignment:
Q  143 ataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataatccttctacacta 213  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  7217014 ataacaaaaatggcatgtgttgcggttagattgacgaagaacactgatcttaccataatccctccacacta 7217084  T

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Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 14109726 - 14109669
Alignment:
Q  64 ggcgccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaa 121  Q
    |||||| ||| ||||||||||||||||||||||||| || | ||||||||||||||||    
T  14109726 ggcgccatttctggtaggagacttgaataggtctcctacagtaggagacattaaaaaa 14109669  T

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Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 7217129 - 7217185
Alignment:
Q  241 agagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgattg 297  Q
    ||||||||||||||| |||||||||||||||||||||  | |||||| |||||||||    
T  7217129 agagagagacgtgtattgtagcaactccattgttgttgttacactttctgttgattg 7217185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 32966889 - 32966824
Alignment:
Q  58 aatctcggcgccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaaga 123  Q
    |||| ||||||||||| | ||||||||||| ||||||||||| | || | ||||||||||||||||    
T  32966889 aatcacggcgccgtttctcgtaggagacttaaataggtctcctatggtatgagacattaaaaaaga 32966824  T

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Target: scaffold0015 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 143 - 297
Target Start/End: Complemental strand, 35770 - 35611
Alignment:
Q  143 ataacaaaaatgacatgtgttgcggttagattgacgaagaacactgatcttaccataatccttctacactatannnnnnnnnc-----catttggtagat 237  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||| ||| ||||| |               || |||||| ||    
T  35770 ataacaaaaatgaaatgtgttgcggttagattgacgaagaacattaatcttaccataatccctctgcactagatttttttttttttttcaattggtatat 35671  T
Q  238 ctaagagagagacgtgtactgtagcaactccattgttgttactgcactttttgttgattg 297  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  35670 ctaagagagagacgtgtactgtagcaactccattgttgttgctgcactttctgttgattg 35611  T

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Target: scaffold0015; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 35854 - 35801
Alignment:
Q  68 ccgtttatggtaggagacttgaataggtctcccacgggaggagacattaaaaaaga 123  Q
    ||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||    
T  35854 ccgtttatggtagaagatttgaataggtctcccac--taggagacattaaaaaaga 35801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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