View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17758_high_35 (Length: 293)
Name: NF17758_high_35
Description: NF17758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17758_high_35 |
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Alignment Details
Target: chr3 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 21 - 284
Target Start/End: Complemental strand, 38829733 - 38829470
Alignment:
| Q |
21 |
agtcctgggacttcatttagaataccagatgcagagatattcctgtacactggaattgagaatgcatctaatgctgattatgatcaaacaagtcctgaat |
120 |
Q |
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| T |
38829733 |
agtcctgggacttcatttagaataccagatgcagagatattcctgtacactggaattgagaatgcatctaatgctgattatgatcaaacaagtcctgaat |
38829634 |
T |
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| Q |
121 |
catattcatgttcaagtgaactaaacaattctgatgctgcaaattccccatataataacaaatcgaactctgtcaattatgctgcaaggcgcttaaagtc |
220 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38829633 |
catattcatgttcaagtgaactaaacaattctgatgatgcaaattccccatataataacaaatcgaactctgtcaattatgctgcaaggcgcttaaagtt |
38829534 |
T |
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| Q |
221 |
tcttctaaggtggcctagaagaaaagacacaaaaacaactttctcagaaatggaagatgatgat |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38829533 |
tcttctaaggtggcctagaagaaaagacacaaaaacaactttctcagaaatggaagatgatgat |
38829470 |
T |
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