View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17758_high_38 (Length: 282)
Name: NF17758_high_38
Description: NF17758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17758_high_38 |
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Alignment Details
Target: chr5 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 7609018 - 7608752
Alignment:
| Q |
1 |
catagggctgtataataggagtagctatttgactagaataatttgaaggcagtagctagcatgcatgacagaaataaggaaagaaacccatatctcacac |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7609018 |
cataaggctgtataataggagtagctatttgactagaataatttgaaggcagtagctagcatgcatgacagaaataaggaaagaaacccatatctcacac |
7608919 |
T |
|
| Q |
101 |
agtgcaggcacagtattttgattgtaatctaccatgggatgcttaaactccaataataacaatctggtccacaagctacatatgcacagcacagctagca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7608918 |
agtgcaggcacagtattttgattgtaatctaccatgggatgcttaaactccaataataacaatctggtccacaagctacatatgcacagcacagctagca |
7608819 |
T |
|
| Q |
201 |
acaccaaccaactaccaacttttttatgagcctttgacacaaacgaggtgtttgttgtatgttatgt |
267 |
Q |
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|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
7608818 |
acaccaaccaactaccaacttttttatgagtctttgacacaaacgaggtgtttgttgtatgttatgt |
7608752 |
T |
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