View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17758_high_55 (Length: 217)
Name: NF17758_high_55
Description: NF17758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17758_high_55 |
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Alignment Details
Target: chr2 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 38 - 192
Target Start/End: Complemental strand, 13394457 - 13394304
Alignment:
| Q |
38 |
tgttaaattctacgtagcatcgattgaaagtgtatctaatgtctgacacgattaacacgacttcaacacacacataatatttaatcgcttttatttcttt |
137 |
Q |
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| T |
13394457 |
tgttaaattctacgtagcatcgattgaaagtgta-ctaatgtctgacacgattaacacgacttcaacacacacgtaatatttaatcgcttttatttcttt |
13394359 |
T |
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| Q |
138 |
tagattgttaccaatatctacatgttagtgttagtgacatgttcgaatggactcg |
192 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |
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| T |
13394358 |
tagattgttaccaatatcgacatgttagtgttagtgacatgttcagatggactcg |
13394304 |
T |
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