View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17758_high_56 (Length: 210)
Name: NF17758_high_56
Description: NF17758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17758_high_56 |
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Alignment Details
Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 54105555 - 54105753
Alignment:
| Q |
1 |
ttgagccacgaaattgaatgaccttgttcttgttaaaggtgccaggactatcctaataagacacacacgaaaatgaattaatcaagaaattagaacaaag |
100 |
Q |
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| T |
54105555 |
ttgagccacgaaattgaatgaccttgttcttgttaatggtgccaggactatcctaataagacacacacaaaaatgaattaatcaagaaattagaacaaag |
54105654 |
T |
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| Q |
101 |
ttcaatgtgatgaagcactaaataaattatctacctgtgggacagattgaatcttcccatgttgtatgggatgaggaggggtatcacttcttttccttc |
199 |
Q |
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| T |
54105655 |
ttcaatgtgatgaagcactaaataaattatttacctgtgggacagattgaattttcccatgttgtatgggatgaggaggggtatcacttcttttccttc |
54105753 |
T |
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