View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17758_high_6 (Length: 563)
Name: NF17758_high_6
Description: NF17758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17758_high_6 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 383; Significance: 0; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 42 - 552
Target Start/End: Complemental strand, 36387946 - 36387433
Alignment:
| Q |
42 |
cctcacatcagcaactgcataggcagtacaagagcagtttctcaagcattcttcctcacatccttccaaactcaacccccctttaccaaccgccacagat |
141 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| |||||| ||||||||||| ||||||| ||||||||||||| || | |||| |||| ||||||||| |
|
|
| T |
36387946 |
cctcacatcagcaattgaataggcagtacaagaacagttttgcaagcattctttctcacattcttccaaactcaaaccacttttagcaactgccacagat |
36387847 |
T |
 |
| Q |
142 |
gtatcaggaactttcaagctcacaactttgacaaacccttctccattcccacaaaccgatacacctttcttccttacacaccctcccgacccatct-cta |
240 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| || ||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
36387846 |
gtatcaggaactttcaagcttacaactttgataaacccttctccattctcacaaacagacgagcctttcttccttacacaccctcccgtcccatcttcta |
36387747 |
T |
 |
| Q |
241 |
ctc--ataccaatcacgtggaaattttgcttcaaaaccaagtaaacaagtgcacttaaagtcgtcaaagttaaaagggtcacaattaccatttgatccac |
338 |
Q |
| |
|
|| ||||||||||||||||||||| | |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36387746 |
ttctgataccaatcacgtggaaatttgggttcataaccaagtaaacaagaacacttaaagtcatcaaagttaaaagggtcacaattaccatttgatccac |
36387647 |
T |
 |
| Q |
339 |
atgttccatagttaccacattcgtcagatggttcagaccagcaccggctccattggcccgtttgactgtcccacctgaatgtttgaaggaaaccagattg |
438 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36387646 |
atgttccatagttaccacattcgtcagatggttcagaccagcaccggctccattggcccgtttgactgtcccacctgaatgtttgaaggaaaccagattg |
36387547 |
T |
 |
| Q |
439 |
ctgaatcactaccctagttatgacagacttagcgaacatgttatatgagaatgctacatagttatcatcatcttccaaaaaagaaacattcaaaatcgcc |
538 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36387546 |
ctgaatcactaccctagttatgacagacttagcgaacatgttatatgagaatgctacatagttatcatcatcttccaaaaaagaaacattcaaaatcgcc |
36387447 |
T |
 |
| Q |
539 |
atatctcgtttcat |
552 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
36387446 |
atatctcgtttcat |
36387433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 42 - 552
Target Start/End: Complemental strand, 36369367 - 36368858
Alignment:
| Q |
42 |
cctcacatcagcaactgcataggcagtacaagagcagtttctcaagcattcttcctcacatccttccaaactcaacccccctttaccaaccgccacagat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| || |||||| |||||||||||||| |
|
|
| T |
36369367 |
cctcacatcagcaactgcataggcagtacaagagcagtttctcaagcattctttctcacattcttccaaactcaaaccacctttagcaaccgccacagat |
36369268 |
T |
 |
| Q |
142 |
gtatcaggaactttcaagctcacaactttgacaaacccttctccattcccacaaaccgatacacctttcttccttacacaccctcccgacccatctcta- |
240 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36369267 |
gtatcgggaactttcaagctcacaactttgacaaacccttctccattcccacaaaccgatacacctttcttccttacacaccctcccgacccatctctat |
36369168 |
T |
 |
| Q |
241 |
ctcataccaatcacgtggaaa-ttttgcttcaaaaccaagtaaacaagtgcacttaaagtcgtcaaagttaaaagggtcacaattaccatttgatccaca |
339 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
36369167 |
ctcataccaatcacgtggaaatttttgcttcaaaaccaagtaaacaagtgcacttaaagtcttcaaagttaaaaaggtcacaattactgtttgatccaca |
36369068 |
T |
 |
| Q |
340 |
tgttccatagttaccacattcgtcagatggttcagaccagcaccggctccattggcccgtttgactgtcccacctgaatgtttgaaggaaaccagattgc |
439 |
Q |
| |
|
|||||||||||| |||||| ||| | ||||||||||||| ||||| ||||||||| | |||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
36369067 |
ggttccatagttatcacattggtctgttggttcagaccagtaccggttccattggctcttttgactgtcccacatgaatgtttgaaagaaaccagattgc |
36368968 |
T |
 |
| Q |
440 |
tgaatcactaccctagttatgacagacttagcgaacatgttatatgagaatgctacatagttatcatcatcttccaaaaaagaaacattcaaaatcgcca |
539 |
Q |
| |
|
|||| | ||| ||||| |||||||||||| ||||||||||||| | | |||||||||||| |||||||| | ||||||||||| ||| | | || |
|
|
| T |
36368967 |
tgaaccgctattctagtaatgacagacttatcgaacatgttatacgtaagtgctacatagtt---gtcatcttcaaccaaagaaacattaaaagtggtca |
36368871 |
T |
 |
| Q |
540 |
tatctcgtttcat |
552 |
Q |
| |
|
||||||||||||| |
|
|
| T |
36368870 |
tatctcgtttcat |
36368858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 43 - 552
Target Start/End: Complemental strand, 36373985 - 36373474
Alignment:
| Q |
43 |
ctcacatcagcaactgcataggcagtacaagagcagtttctcaagcattcttcctcacatccttccaaactcaacccccctttaccaaccgccacagatg |
142 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||| || |||||| ||| ||||||||| |
|
|
| T |
36373985 |
ctcacatcagcaactgcataggaagtacaagagcagtttctcaagcattcttcctcgcattcttccaaactcagaccacctttagtaactgccacagata |
36373886 |
T |
 |
| Q |
143 |
tatcaggaactttcaagctcacaactttgacaaacccttctccattcccacaaaccgatacacctttcttccttacacaccctcccgacccatctct--a |
240 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| ||| | ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
36373885 |
tatcaggaactttcaagcttgcaactttgataaacccttctccattccgacaaatagatgcgcctttcttccttacacaccctcctgacccatctcttct |
36373786 |
T |
 |
| Q |
241 |
ctcataccaatcacgtggaaattttgcttcaaaaccaagtaaacaagtgcacttaaagtcgtcaaagttaaaagggtcacaattaccatttgatccacat |
340 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| ||| |||||| ||||||||||| |||||||| ||||||||||| |||| ||||||||||| |
|
|
| T |
36373785 |
ctcataccaatcacgtggaaattttggttcaaaacctggtagacaagtacacttaaagtcctcaaagttcaaagggtcacagttactgtttgatccacag |
36373686 |
T |
 |
| Q |
341 |
gttccatagttaccacattcgtcagatggttcagaccagcaccggctccattggcccgtttgactgtcccacctgaatgtttgaaggaaaccagattgct |
440 |
Q |
| |
|
|||||||||||| |||||| || | ||||||||||||| ||| | ||||||| | ||||| ||| ||| ||||| |||||| |||||||||||||| |
|
|
| T |
36373685 |
gttccatagttatcacattggtttgttggttcagaccagaacctgttccattgacttttttgattgttccaagtgaatatttgaaagaaaccagattgct |
36373586 |
T |
 |
| Q |
441 |
gaatcactaccctagttatgacagacttagcgaacatgttatatgagaatgctacatagttatcatcatcttccaaaaaagaaacattcaaaatcgccat |
540 |
Q |
| |
|
||| |||| ||||| ||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
36373585 |
gaacaactatcctagctatgacagacttatcaaacatgttatatgagattgctacatagttatcatcatcttccacaaaagaaacattcaaaatcgccat |
36373486 |
T |
 |
| Q |
541 |
atctcgtttcat |
552 |
Q |
| |
|
|||||||||||| |
|
|
| T |
36373485 |
atctcgtttcat |
36373474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 44 - 507
Target Start/End: Complemental strand, 36426136 - 36425671
Alignment:
| Q |
44 |
tcacatcagcaactgcataggcagtacaagagcagtttctcaagcattcttcctcacatccttccaaactcaacccccctttaccaaccgccacagatgt |
143 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||| || || | |||| ||| ||| || |
|
|
| T |
36426136 |
tcacgtcagcaactgcataggcagtacaagagcagtttctcaagcattctttctcacattcatccaaattcaaaccatctatggcaactgccgtagacgt |
36426037 |
T |
 |
| Q |
144 |
atcaggaactttcaagctcacaactttgacaaacccttctccattcccacaaaccgatacacctttcttccttacacaccctcccgacccatctctactc |
243 |
Q |
| |
|
||||||||||| | ||| |||||||||| ||||||||||||||| |||||||| ||| |||||||||| |||||||| || || |||||||||| |||| |
|
|
| T |
36426036 |
ttcaggaacttttacgcttacaactttgataaacccttctccatttccacaaacagatgcacctttctttcttacacatccacctgacccatctcgactc |
36425937 |
T |
 |
| Q |
244 |
--ataccaatcacgtggaaattttgcttcaaaaccaagtaaacaagtgcacttaaagtcgtcaaagttaaaagggtcacaattaccatttgatccacatg |
341 |
Q |
| |
|
||||||||| ||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
36425936 |
tcataccaatctcgtggaaattttggttcgaaaccaagtaaacaagtacacttaaagttctcaaagttcaaagggtcacaattactatttgatccacatg |
36425837 |
T |
 |
| Q |
342 |
ttccatagttaccacattcgtcagatggttcagaccagcaccggctccattggcccgtttgactgtcccacctgaatgtttgaaggaaaccagattgctg |
441 |
Q |
| |
|
|||| |||||| |||||| ||| | ||||||||||||| ||||||||||||||| | |||||||||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
36425836 |
ttccgtagttagcacattggtctgttggttcagaccagtaccggctccattggctcttttgactgtcccacgtgaatgtttgaaagaaaccagattgctg |
36425737 |
T |
 |
| Q |
442 |
aatcactaccctagttatgacagacttagcgaacatgttatatgagaatgctacatagttatcatc |
507 |
Q |
| |
|
|| |||||||||||| |||||| ||||| |||||||||||||||| |||||||||||| ||||| |
|
|
| T |
36425736 |
aaccactaccctagtaatgacatacttattaaacatgttatatgagagtgctacatagttgtcatc |
36425671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 42 - 552
Target Start/End: Complemental strand, 36404658 - 36404149
Alignment:
| Q |
42 |
cctcacatcagcaactgcataggcagtacaagagcagtttctcaagcattcttcctcacatccttccaaactcaacccccctttaccaaccgccacagat |
141 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||| || || | |||| || ||||| |
|
|
| T |
36404658 |
cctcacatcagcaactgcataggcagtacaagagcaatttctcaagcattctttctcacattcttccaaactcaaaccatctatggcaactgctccagat |
36404559 |
T |
 |
| Q |
142 |
gtatcaggaactttcaagctcacaactttgacaaacccttctccattcccacaaaccgatacacctttcttccttacacaccctcccgacccatctctac |
241 |
Q |
| |
|
|||||| |||||||| || |||||||| | ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36404558 |
atatcagcaactttcacacttacaacttttataaacccttctccattcccacaaatagatgcacctttcttccttacacaccctcccgacccatctctac |
36404459 |
T |
 |
| Q |
242 |
tc--ataccaatcacgtggaaattttgcttcaaaaccaagtaaacaagtgcacttaaagtcgtcaaagttaaaagggtcacaattaccatttgatccaca |
339 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
36404458 |
tctcataccaatcacgtggaaattttggttcaaaaccaagtaaacaagtgcacttaaagtcgtcaaagttaaaagggtcacaattactgtttgatccaca |
36404359 |
T |
 |
| Q |
340 |
tgttccatagttaccacattcgtcagatggttcagaccagcaccggctccattggcccgtttgactgtcccacctgaatgtttgaaggaaaccagattgc |
439 |
Q |
| |
|
||||||||||||| |||||| ||| | |||||| || || ||||| ||||||| | ||| | | ||||| ||||| |||||| |||||||||||| |
|
|
| T |
36404358 |
tgttccatagttatcacattggtctgttggttctgaatagaaccggttccattgattcttttcattcccccacgtgaatatttgaaagaaaccagattga |
36404259 |
T |
 |
| Q |
440 |
tgaatcactaccctagttatgacagacttagcgaacatgttatatgagaatgctacatagttatcatcatcttccaaaaaagaaacattcaaaatcgcca |
539 |
Q |
| |
|
| || ||| ||||| |||||||||||| | |||||||||||||||| |||||| |||| |||||||||| ||||||||| || ||| | ||| |
|
|
| T |
36404258 |
ttaacaactttcctagcgatgacagacttatcaaacatgttatatgagattgctacggagtt---ttcatcttccacaaaagaaacgttaaaagtttcca |
36404162 |
T |
 |
| Q |
540 |
tatctcgtttcat |
552 |
Q |
| |
|
||||||||||||| |
|
|
| T |
36404161 |
tatctcgtttcat |
36404149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 42 - 507
Target Start/End: Complemental strand, 36411972 - 36411505
Alignment:
| Q |
42 |
cctcacatcagcaactgcataggcagtacaagagcagtttctcaagcattcttcctcacatccttccaaactcaacccccctttaccaaccgccacagat |
141 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||| |||||||| |||| || || | |||| ||| ||||| |
|
|
| T |
36411972 |
cctcacatcagcaactgcataggcattacaagaacagtttctcaagcaatctttctcacattcttccaaagtcaaaccatctatggcaactgccccagat |
36411873 |
T |
 |
| Q |
142 |
gtatcaggaactttcaagctcacaactttgacaaacccttctccattcccacaaaccgatacacctttcttccttacacaccctcccgacccatctctac |
241 |
Q |
| |
|
||||||||||||||| || | ||||||| |||||||||||||||||||||||| ||| ||||| | || |||||||| |||||| |||||||||||| |
|
|
| T |
36411872 |
atatcaggaactttcacccttaaaactttgttaaacccttctccattcccacaaacagatgcacctctttttcttacacatcctcccaacccatctctac |
36411773 |
T |
 |
| Q |
242 |
tc--ataccaatcacgtggaaattttgcttcaaaaccaagtaaacaagtgcacttaaagtcgtcaaagttaaaagggtcacaattaccatttgatccaca |
339 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||| |||| |||||| |
|
|
| T |
36411772 |
tctcataccaatcacgtggaaattttggttcaaaaccaagtaaacaagtacacttaaagctctcaaagttcaaagggtcacaattactgtttggtccaca |
36411673 |
T |
 |
| Q |
340 |
tgttccatagttaccacattcgtcagatggttcagaccagcaccggctccattggcccgtttgactgtcccacctgaatgtttgaaggaaaccagattgc |
439 |
Q |
| |
|
|||||| |||||| |||||| ||| | ||||||||||||| ||||||||||||| | | ||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
36411672 |
tgttccgtagttagcacattggtctgttggttcagaccagtaccggctccattgactctcttgactgtcccacatgaatgtttgaaagaaaccagattgc |
36411573 |
T |
 |
| Q |
440 |
tgaatcactaccctagttatgacagacttagcgaacatgttatatgagaatgctacatagttatcatc |
507 |
Q |
| |
|
|||| ||||| ||| || |||||||||||| |||||||||||||||| || ||||||||| ||||| |
|
|
| T |
36411572 |
tgaaccactatccttgtaatgacagacttattaaacatgttatatgagagtgatacatagttgtcatc |
36411505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 42 - 507
Target Start/End: Complemental strand, 36417303 - 36416836
Alignment:
| Q |
42 |
cctcacatcagcaactgcataggcagtacaagagcagtttctcaagcattcttcctcacatccttccaaactcaacccccctttaccaaccgccacagat |
141 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||| |||||||| |||| || || | |||| ||| ||||| |
|
|
| T |
36417303 |
cctcacatcagcaactgcataggcattacaagaacagtttctcaagcaatctttctcacattcttccaaagtcaaaccatctatggcaactgccccagat |
36417204 |
T |
 |
| Q |
142 |
gtatcaggaactttcaagctcacaactttgacaaacccttctccattcccacaaaccgatacacctttcttccttacacaccctcccgacccatctctac |
241 |
Q |
| |
|
||||||||||||||| || | ||||||| |||||||||||||||||||||||| ||| ||||| | || |||||||| |||||| |||||||||||| |
|
|
| T |
36417203 |
atatcaggaactttcacccttaaaactttgttaaacccttctccattcccacaaacagatgcacctctttttcttacacatcctcccaacccatctctac |
36417104 |
T |
 |
| Q |
242 |
tc--ataccaatcacgtggaaattttgcttcaaaaccaagtaaacaagtgcacttaaagtcgtcaaagttaaaagggtcacaattaccatttgatccaca |
339 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||| |||| |||||| |
|
|
| T |
36417103 |
tctcataccaatcacgtggaaattttggttcaaaaccaagtaaacaagtacacttaaagctctcaaagttcaaagggtcacaattactgtttggtccaca |
36417004 |
T |
 |
| Q |
340 |
tgttccatagttaccacattcgtcagatggttcagaccagcaccggctccattggcccgtttgactgtcccacctgaatgtttgaaggaaaccagattgc |
439 |
Q |
| |
|
|||||| |||||| |||||| ||| | ||||||||||||| ||||||||||||| | | ||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
36417003 |
tgttccgtagttagcacattggtctgttggttcagaccagtaccggctccattgactctcttgactgtcccacatgaatgtttgaaagaaaccagattgc |
36416904 |
T |
 |
| Q |
440 |
tgaatcactaccctagttatgacagacttagcgaacatgttatatgagaatgctacatagttatcatc |
507 |
Q |
| |
|
|||| ||||| ||| || |||||||||||| |||||||||||||||| || ||||||||| ||||| |
|
|
| T |
36416903 |
tgaaccactatccttgtaatgacagacttattaaacatgttatatgagagtgatacatagttgtcatc |
36416836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 42 - 504
Target Start/End: Complemental strand, 36397725 - 36397261
Alignment:
| Q |
42 |
cctcacatcagcaactgcataggcagtacaagagcagtttctcaagcattcttcctcacatccttccaaactcaacccccctttaccaaccgccacagat |
141 |
Q |
| |
|
||||||||| || |||||||||| |||||| |||||||||||||||||||||| ||||||| | ||||||||||| || || | ||| ||| ||||| |
|
|
| T |
36397725 |
cctcacatcggctactgcataggaagtacaggagcagtttctcaagcattctttctcacattcatccaaactcaaaccatctatggtaactgccccagat |
36397626 |
T |
 |
| Q |
142 |
gtatcaggaactttcaagctcacaactttgacaaacccttctccattcccacaaaccgatacacctttcttccttacacaccctcccgacccatctctac |
241 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||| ||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36397625 |
atatcaggaactttcaagcttacaactttgataaacccttcgccattcccacagacagatgcacctttcttccttacacaccctcccgacccatctctac |
36397526 |
T |
 |
| Q |
242 |
tc--ataccaatcacgtggaaattttgcttcaaaaccaagtaaacaagtgcacttaaagtcgtcaaagttaaaagggtcacaattaccatttgatccaca |
339 |
Q |
| |
|
|| ||||||||| | ||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
36397525 |
tctcataccaatcgcttggaaattttggttcaaaaccaagtaaacacgtgcacttaaagttctcaaagttcaaagggtcacaattactgtttgatccaca |
36397426 |
T |
 |
| Q |
340 |
tgttccatagttaccacattcgtcagatggttcagaccagcaccggctccattggcccgtttgactgtcccacctgaatgtttgaaggaaaccagattgc |
439 |
Q |
| |
|
|||||||||||| |||||| || | |||||| |||||| ||| | ||||||| | | ||||| ||| ||| ||||| |||||| ||||||||||||| |
|
|
| T |
36397425 |
cgttccatagttatcacattggtttgttggttctgaccagaacctgttccattgactcttttgattgttccaagtgaatatttgaatgaaaccagattgc |
36397326 |
T |
 |
| Q |
440 |
tgaatcactaccctagttatgacagacttagcgaacatgttatatgagaatgctacatagttatc |
504 |
Q |
| |
|
|||| |||| ||||| ||||||||||||| | ||||||| ||||| | ||||||||||||||| |
|
|
| T |
36397325 |
tgaacaactaacctagctatgacagacttatcaaacatgtcgtatgaaagtgctacatagttatc |
36397261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 43 - 507
Target Start/End: Complemental strand, 36433994 - 36433528
Alignment:
| Q |
43 |
ctcacatcagcaactgcataggcagtacaagagcagtttctcaagcattcttcctcacatccttccaaactcaacccccctttaccaaccgccacagatg |
142 |
Q |
| |
|
||||||| | ||||||||||||| |||||||| |||||||| |||||||||| |||||| ||||||||||||| || ||||| || |||| |||| |
|
|
| T |
36433994 |
ctcacattatcaactgcataggctgtacaagaacagtttctgaagcattctttttcacattcttccaaactcaaaccacctttggcatttgccatcgatg |
36433895 |
T |
 |
| Q |
143 |
tatcaggaactttcaagctcacaactttgacaaacccttctccattcccacaaaccgatacacctttcttccttacacaccctcccgacccatctcta-- |
240 |
Q |
| |
|
||||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||| | |
|
|
| T |
36433894 |
tatcaggaactttcaagctgacaattttgataaacccttctccattcccacaaacagatgaaccgttcttccttacacaccctcctgacccatctccact |
36433795 |
T |
 |
| Q |
241 |
ctcataccaatcacgtggaaattttgcttcaaaaccaagtaaacaagtgcacttaaagtcgtcaaagttaaaagggtcacaattaccatttgatccacat |
340 |
Q |
| |
|
|||||||||||| | |||| |||| | |||||||||| ||||||||| || || ||||| ||||||| | |||||||||||||| |||||||||||| |
|
|
| T |
36433794 |
ctcataccaatcgcctggagatttgggttcaaaaccaggtaaacaagcacatttgaagtccgcaaagttcatagggtcacaattactgtttgatccacat |
36433695 |
T |
 |
| Q |
341 |
gttccatagttaccacattcgtcagatggttcagaccagcaccggctccattggcccgtttgactgtcccacctgaatgtttgaaggaaaccagattgct |
440 |
Q |
| |
|
|||||||||||| |||||| || | ||||| || || || || ||||||| | ||| | |||||||| | ||| |||||| |||||||||||||| |
|
|
| T |
36433694 |
gttccatagttatcacattggtttgttggttgtgaatagaactggttccattgactttttttattgtcccacattaatatttgaaagaaaccagattgct |
36433595 |
T |
 |
| Q |
441 |
gaatcactaccctagttatgacagacttagcgaacatgttatatgagaatgctacatagttatcatc |
507 |
Q |
| |
|
||| ||| | |||||| | |||||||||| | | ||||||||| | || |||||||| ||| ||||| |
|
|
| T |
36433594 |
gaaccaccatcctagtaacgacagacttatcaaccatgttatacgtgagtgctacattgttgtcatc |
36433528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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