View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17758_low_40 (Length: 284)
Name: NF17758_low_40
Description: NF17758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17758_low_40 |
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Alignment Details
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 32658234 - 32657968
Alignment:
| Q |
1 |
caaactatcctaaatcatcctaatcatagagcgtttgagtatttgcatgagcgtatatattgtcactatttgttggacctgcagtgatcatcactagacc |
100 |
Q |
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| T |
32658234 |
caaactatcctaaatcatcctaatcatagagcgtttgagtatttgcatgagcgtatatattgtcactatttgttggacctgcagtcatcatcactagacc |
32658135 |
T |
|
| Q |
101 |
ttagaaatttaaatcgatcggggacccaattttagtccaagattgaacactgattaagctaaatgtactctacggtttactttattaatcatcacacata |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
32658134 |
ttagaaatttaaatcgatcggggacccaattttagtccaagattgaacactgattaagctacatgtactctacggtttactttattaatcatcacacata |
32658035 |
T |
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| Q |
201 |
agtttctatataacaagatgtatccatgttcttctactagacagtagtacacttggtccatatagtt |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32658034 |
agtttctatataacaagatgtatccatgttcttctactagacagtagtacacttggtccatatagtt |
32657968 |
T |
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