View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17758_low_46 (Length: 273)
Name: NF17758_low_46
Description: NF17758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17758_low_46 |
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Alignment Details
Target: chr3 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 52315993 - 52315733
Alignment:
| Q |
1 |
ctgcttctagatgcaggctcccctacttttggaagttgaacatcctcttctctctccttttcctttgtgcatgttgttgattcctcttgttgttcatctt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
52315993 |
ctgcttctagatgcaggctcccctacttttggaagttgaacatcctcttctctctccttttcctttgtgcatgttgttgagtcctcttgttgttcatctt |
52315894 |
T |
|
| Q |
101 |
tctttgttgagtttactgtatcctcttcctcttttagttccttagtttccgtaacaacaacaaccttacgaggccttcctctcttccgacgaggagcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52315893 |
tctttgttgagtttactgtatcctcttcctcttttagttccttagtttccgtaacaacaacaaccttacgaggccttcctctcttccgacgaggagcttc |
52315794 |
T |
|
| Q |
201 |
ttctggttcacctccttctgttgatgcagcagcatcctcagctagcgctactgatgaaagt |
261 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52315793 |
ttctggttcacctccttctgttgatgcagcagcatcctcagctagcgctactgatgaaagt |
52315733 |
T |
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