View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17759_low_3 (Length: 239)
Name: NF17759_low_3
Description: NF17759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17759_low_3 |
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Alignment Details
Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 18 - 215
Target Start/End: Original strand, 43142346 - 43142544
Alignment:
| Q |
18 |
aacatgtcttcatcaatgggctgtgcatggttaaccaaaccatataacccaatatttt-tggttaaggttcatataccaaaccattatttggaaaacacc |
116 |
Q |
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| T |
43142346 |
aacatgtcttcatcaatgggctgtgcatggttaaccaaaccatataacccaatattttttggttaaggttcatataccaaaccattatttggaaaacacc |
43142445 |
T |
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| Q |
117 |
ggattatgcttcggaagcggtctgggccggtttagaacaggttccattatatttgattttcagtcgttaaattcggctgagtgctaccacaaccctctc |
215 |
Q |
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| T |
43142446 |
gaattatgcttcggaagcggtttgggccggtttagaaccggttccattatatttgattttcagtcattaatttcggttgagtgctaccacaaccctctc |
43142544 |
T |
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