View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1775_high_5 (Length: 243)

Name: NF1775_high_5
Description: NF1775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1775_high_5
NF1775_high_5
[»] chr6 (49 HSPs)
chr6 (20-235)||(30059946-30060161)
chr6 (71-235)||(29887297-29887461)
chr6 (71-235)||(28926382-28926546)
chr6 (81-235)||(24730855-24731009)
chr6 (71-212)||(29835238-29835379)
chr6 (71-212)||(29894576-29894717)
chr6 (74-235)||(29073763-29073924)
chr6 (74-235)||(29078527-29078688)
chr6 (74-235)||(29106336-29106497)
chr6 (71-212)||(29866672-29866813)
chr6 (71-235)||(30061830-30061994)
chr6 (81-235)||(24890091-24890245)
chr6 (71-235)||(29211228-29211392)
chr6 (71-233)||(24263587-24263749)
chr6 (71-235)||(29905639-29905803)
chr6 (71-235)||(30126890-30127054)
chr6 (83-228)||(24886413-24886557)
chr6 (81-235)||(29882435-29882589)
chr6 (81-235)||(29909591-29909745)
chr6 (71-235)||(30118576-30118740)
chr6 (81-235)||(29903246-29903400)
chr6 (81-235)||(29357824-29357978)
chr6 (75-234)||(29929274-29929433)
chr6 (81-234)||(29116262-29116415)
chr6 (71-234)||(29085019-29085182)
chr6 (71-235)||(29348433-29348597)
chr6 (71-234)||(29889731-29889894)
chr6 (144-235)||(29898077-29898168)
chr6 (93-228)||(29946444-29946579)
chr6 (113-234)||(29099344-29099465)
chr6 (132-235)||(29366317-29366420)
chr6 (128-235)||(29876825-29876932)
chr6 (136-235)||(30999838-30999937)
chr6 (71-199)||(29949732-29949860)
chr6 (142-235)||(24271853-24271946)
chr6 (114-235)||(30149527-30149648)
chr6 (83-235)||(25451118-25451270)
chr6 (138-204)||(16702057-16702123)
chr6 (84-199)||(29953542-29953657)
chr6 (71-129)||(24271799-24271857)
chr6 (119-220)||(30053442-30053543)
chr6 (81-156)||(29912051-29912126)
chr6 (81-156)||(29914071-29914146)
chr6 (137-199)||(15727090-15727152)
chr6 (20-78)||(30061644-30061705)
chr6 (21-78)||(29835504-29835561)
chr6 (21-78)||(29866938-29866995)
chr6 (21-78)||(29887586-29887643)
chr6 (111-199)||(30135161-30135250)
[»] scaffold0573 (1 HSPs)
scaffold0573 (71-235)||(4137-4301)
[»] chr3 (4 HSPs)
chr3 (117-237)||(24219116-24219236)
chr3 (144-235)||(24226820-24226911)
chr3 (138-208)||(33997967-33998037)
chr3 (71-199)||(16351086-16351214)
[»] scaffold0237 (1 HSPs)
scaffold0237 (81-235)||(22343-22497)
[»] chr2 (1 HSPs)
chr2 (97-228)||(15062737-15062868)
[»] chr1 (5 HSPs)
chr1 (126-227)||(10130145-10130246)
chr1 (137-235)||(17251313-17251411)
chr1 (111-227)||(19490258-19490374)
chr1 (137-220)||(41316274-41316358)
chr1 (148-208)||(41198768-41198828)
[»] scaffold0054 (1 HSPs)
scaffold0054 (172-235)||(53532-53595)
[»] scaffold0572 (1 HSPs)
scaffold0572 (137-227)||(3241-3331)
[»] chr7 (1 HSPs)
chr7 (71-199)||(3643073-3643201)
[»] scaffold0014 (3 HSPs)
scaffold0014 (72-220)||(137389-137537)
scaffold0014 (138-234)||(121382-121478)
scaffold0014 (150-220)||(104652-104722)
[»] scaffold0019 (1 HSPs)
scaffold0019 (137-199)||(126024-126086)
[»] scaffold0429 (1 HSPs)
scaffold0429 (137-220)||(6211-6294)
[»] scaffold0051 (2 HSPs)
scaffold0051 (137-199)||(47804-47866)
scaffold0051 (152-220)||(43201-43269)
[»] chr4 (1 HSPs)
chr4 (132-199)||(44262489-44262556)
[»] scaffold0654 (1 HSPs)
scaffold0654 (138-199)||(1122-1183)
[»] chr8 (1 HSPs)
chr8 (119-180)||(9782594-9782655)
[»] scaffold0652 (1 HSPs)
scaffold0652 (138-234)||(1197-1293)
[»] scaffold0086 (1 HSPs)
scaffold0086 (142-186)||(31220-31264)


Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 20 - 235
Target Start/End: Original strand, 30059946 - 30060161
Alignment:
Q  20 agcatttggatagcaattattgtccttcatttttgatagcaaagccaaggctccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctgg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30059946 agcatttggatagcaattattgtccttcatttttgatagcaaagccaaggctccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctgg 30060045  T
Q  120 tctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgac 219  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30060046 tctttcaattttgttaataatgcaattgccttgtcaacctgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgac 30060145  T
Q  220 ctctatcattcatctc 235  Q
    ||||||||||||||||    
T  30060146 ctctatcattcatctc 30060161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 29887461 - 29887297
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||  ||||||||||||    
T  29887461 tccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaaatttgttaataacgcaattgccttgtcaacctgatggtttttg 29887362  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    |||||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||    
T  29887361 cataaagcatctaataaagaactgtaagtaattatatcaggtggttgacctctatcatgcatctc 29887297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 28926382 - 28926546
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||| ||| |||||||||| |||||| ||||||||| | | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28926382 tccattaataagaatagtgtatgtgtacatatttggttgaagaccctggtctttcaattttgttaataatgcaattgccttgtcaacatgatggtttttg 28926481  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    ||||||||||  |||| |||| |||||||||||||||||||| ||||||||||||||| ||||||    
T  28926482 cataaagcatccaatagagaactgtaagtaattatatcaggtggttgacctctatcatgcatctc 28926546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 24731009 - 24730855
Alignment:
Q  81 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 180  Q
    |||| ||||| |||||| |||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24731009 agaacagtgtatgtgtacatatctggtcgaataccctggtctttcaaatttgttaataatgcaattgccttgtcaacatgatggtttttgcataaagcat 24730910  T
Q  181 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
      ||||||||||||||||| ||||||| |||| ||||||||||||||| ||||||    
T  24730909 ccaatatagaattgtaagttattatattaggtggttgacctctatcatgcatctc 24730855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 71 - 212
Target Start/End: Complemental strand, 29835379 - 29835238
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  29835379 tccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaattttgttaataacgcaattgccttgtcaacctgatggtttttg 29835280  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggt 212  Q
    ||||||||||  ||||||||| ||||||||||||||||||||    
T  29835279 cataaagcatccaatatagaactgtaagtaattatatcaggt 29835238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 71 - 212
Target Start/End: Complemental strand, 29894717 - 29894576
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  29894717 tccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaattttgttaataacgcaattgccttgtcaacctgatggtttttg 29894618  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggt 212  Q
    ||||||||||  ||||||||| ||||||||||||||||||||    
T  29894617 cataaagcatccaatatagaactgtaagtaattatatcaggt 29894576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 74 - 235
Target Start/End: Complemental strand, 29073924 - 29073763
Alignment:
Q  74 atcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcat 173  Q
    |||||| |||||||||| |||||  ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  29073924 atcaataagaatagtgtatgtgtgcatagttggtcgaataccttggtctttcaattttgttaataatgcaattgccttgtcaacctgatggtttttgcat 29073825  T
Q  174 aaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    |||||||  ||||||||| |||||||||||||||||||| ||  ||||||||||| ||||||    
T  29073824 aaagcatccaatatagaactgtaagtaattatatcaggtggtacacctctatcatgcatctc 29073763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 74 - 235
Target Start/End: Complemental strand, 29078688 - 29078527
Alignment:
Q  74 atcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcat 173  Q
    |||||| |||||||||| |||||  ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  29078688 atcaataagaatagtgtatgtgtgcatagttggtcgaataccttggtctttcaattttgttaataatgcaattgccttgtcaacctgatggtttttgcat 29078589  T
Q  174 aaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    |||||||  ||||||||| |||||||||||||||||||| ||  ||||||||||| ||||||    
T  29078588 aaagcatccaatatagaactgtaagtaattatatcaggtggtacacctctatcatgcatctc 29078527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 74 - 235
Target Start/End: Complemental strand, 29106497 - 29106336
Alignment:
Q  74 atcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcat 173  Q
    |||||| |||||||||| |||||  ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  29106497 atcaataagaatagtgtatgtgtgcatagttggtcgaataccttggtctttcaattttgttaataatgcaattgccttgtcaacctgatggtttttgcat 29106398  T
Q  174 aaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    |||||||  ||||||||| |||||||||||||||||||| ||  ||||||||||| ||||||    
T  29106397 aaagcatccaatatagaactgtaagtaattatatcaggtggtacacctctatcatgcatctc 29106336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 71 - 212
Target Start/End: Complemental strand, 29866813 - 29866672
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||  ||||||||||||    
T  29866813 tccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaaatttgttaataacgcaattgccttgtcaacctgatggtttttg 29866714  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggt 212  Q
    ||||||||||  ||||||||| ||||||||||||||||||||    
T  29866713 cataaagcatccaatatagaactgtaagtaattatatcaggt 29866672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 30061830 - 30061994
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    |||| ||||||||||||||| |||||||||||| ||| | |||||||| ||||||||||||| ||||||||  ||||||||||||| |||||||  ||||    
T  30061830 tccaccaattagaatagtgtatgtgtaaatattcggttgaataccctgatctttcaattttgataataatgtgattgccttgtcaagatgatggcgtttg 30061929  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    ||||||||||  ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  30061930 cataaagcatccaatatagaattgtaagtaattatattaggtggttgacctctatcatgcatctc 30061994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 81 - 235
Target Start/End: Original strand, 24890091 - 24890245
Alignment:
Q  81 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 180  Q
    ||||| |||| |||||| |||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24890091 agaatggtgtatgtgtacatatctggtcgaataccctggtctttcaaatttgttaataatgcaattgccttgtcaacatgatggtttttgcataaagcat 24890190  T
Q  181 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
      ||||||||| ||||||||| ||||| |||| | ||||||||||||| ||||||    
T  24890191 ccaatatagaactgtaagtaactatattaggtggctgacctctatcatgcatctc 24890245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 29211228 - 29211392
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||| |||||||||| |||||  ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||   ||||| |||||    
T  29211228 tccatcaataagaatagtgtatgtgtgcatatttggtcgaataccttggtctttcaattttgttaataatgcaactgccttgtcaacccgatgggttttg 29211327  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    ||||||||||  ||||||||| ||||||||| ||||| |||| ||||||||||||||| ||||||    
T  29211328 cataaagcatccaatatagaactgtaagtaactatattaggtggttgacctctatcatgcatctc 29211392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 24263587 - 24263749
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||    
T  24263587 tccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaattttattaataatgcaattgccttgtcaaccagatggtttttg 24263686  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatc 233  Q
    ||||| ||||  ||||||||| |||| || |||||||||||| |||| |||| ||||| ||||    
T  24263687 cataaggcatccaatatagaactgtacgtgattatatcaggttgttgccctcgatcatgcatc 24263749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 29905803 - 29905639
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||| ||||| |||| |||||| ||||||||| | |||||| ||||||||||||||||||||||||  |||||||||||||  |||| |||||||    
T  29905803 tccatcaataagaatggtgtatgtgtacatatttggttgaatacccaggtctttcaattttgttaataatgtgattgccttgtcaacctgatagtttttg 29905704  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    ||||||||||  ||||||||| | |||||||||||||||||| | ||||||||||||| ||||||    
T  29905703 cataaagcatccaatatagaactctaagtaattatatcaggtggctgacctctatcatgcatctc 29905639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 30126890 - 30127054
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||| |||||||||| |||||| | | ||||| | |||||||||| ||| ||||| ||||| ||||||||||| |||||||  ||||||||||||    
T  30126890 tccatcaataagaatagtgtatgtgtacacacttggttgaataccctggtttttaaatttcgttaacaatgcaattgctttgtcaacctgatggtttttg 30126989  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    ||||||||||  ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  30126990 cataaagcatccaatatagaattgtaaataattatatcaggtggttgacctctatcatgcatctc 30127054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 24886413 - 24886557
Alignment:
Q  83 aatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgcc-ttgtcaatatgatggtttttgcataaagcatt 181  Q
    |||||||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||| ||||||||||     
T  24886413 aatagtgtatgtgtacatatctggtcgaataccctggtctttcaattttgttaataatgcaattgcctttgtc-acatgatggttttt-cataaagcatc 24886510  T
Q  182 taatatagaattgtaagtaattatatcaggtagttgacctctatcat 228  Q
     |||||||||||||||||||||||||||||| | |||||||||||||    
T  24886511 caatatagaattgtaagtaattatatcaggtggctgacctctatcat 24886557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 29882589 - 29882435
Alignment:
Q  81 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 180  Q
    |||||||||| |||||  |||| |||||| ||||| ||| |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  29882589 agaatagtgtatgtgttcatatctggtcgaataccttggcctttcaattttgttaataatgcaattgctttgtcaacatgatgttttttgcataaagcat 29882490  T
Q  181 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
      |||||||||||||| ||||||||||||||| |||| |||| ||||| ||||||    
T  29882489 ccaatatagaattgtaggtaattatatcaggttgttgccctcgatcatgcatctc 29882435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 29909745 - 29909591
Alignment:
Q  81 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 180  Q
    |||||||||| |||||  |||| |||||| ||||| ||| |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  29909745 agaatagtgtatgtgttcatatctggtcgaataccttggcctttcaattttgttaataatgcaattgctttgtcaacatgatgttttttgcataaagcat 29909646  T
Q  181 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
      |||||||||||||| ||||||||||||||| |||| |||| ||||| ||||||    
T  29909645 ccaatatagaattgtaggtaattatatcaggttgttgccctcgatcatgcatctc 29909591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 30118576 - 30118740
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||| ||||| |||| |||||| ||||||||| | || ||| ||||||||||||||||||||||||  |||||||||||||  |||| |||||||    
T  30118576 tccatcaataagaatggtgtatgtgtacatatttggttgaattcccaggtctttcaattttgttaataatgtgattgccttgtcaacctgatagtttttg 30118675  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    ||||||||||  ||||||||| | |||||||||||||||||| | ||||||||||||| ||||||    
T  30118676 cataaagcatccaatatagaactctaagtaattatatcaggtggctgacctctatcatgcatctc 30118740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 29903400 - 29903246
Alignment:
Q  81 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 180  Q
    ||||| |||| |||||  ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||| ||  |||||| ||||||||||||||||    
T  29903400 agaatggtgtatgtgttcatatttggtcgaataccctggtctttcaattttgttaataacgcaattgctttgccagcatgatgttttttgcataaagcat 29903301  T
Q  181 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
      |||||||||||||| ||||||||||||||| |||| |||| ||||| ||||||    
T  29903300 ccaatatagaattgtaggtaattatatcaggttgttgccctcgatcatgcatctc 29903246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 235
Target Start/End: Original strand, 29357824 - 29357978
Alignment:
Q  81 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 180  Q
    |||||||||| |||||| ||||||||| | |||||||||| |||||  | ||||||||| |||||||| |||||||  ||||||||||||||||||||||    
T  29357824 agaatagtgtatgtgtacatatttggttgaataccctggtttttcatctgtgttaataacgcaattgcattgtcaacctgatggtttttgcataaagcat 29357923  T
Q  181 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
      ||||||||| ||||||||| ||||| |||| ||||||||||||||| ||||||    
T  29357924 ccaatatagaactgtaagtaactatattaggtggttgacctctatcatgcatctc 29357978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 29929433 - 29929274
Alignment:
Q  75 tcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcata 174  Q
    ||||| |||||||||| |||||| | | ||||| | |||||||||||||| ||||| ||||| ||||||||||| |||||||  |||||| |||||||||    
T  29929433 tcaataagaatagtgtatgtgtacacacttggttgaataccctggtctttgaatttcgttaacaatgcaattgctttgtcaacctgatgggttttgcata 29929334  T
Q  175 aagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatct 234  Q
    |||||| |||||||||||||||||||| ||||| ||||  |  ||||||||||| |||||    
T  29929333 aagcatctaatatagaattgtaagtaactatattaggtgctacacctctatcatgcatct 29929274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 234
Target Start/End: Complemental strand, 29116415 - 29116262
Alignment:
Q  81 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 180  Q
    |||||| ||| |||||| ||||||||| | ||||||| |||||||||||| ||||| ||||||||||| |||||||  |||||| |||||||||||||||    
T  29116415 agaatactgtatgtgtacatatttggttgaatacccttgtctttcaatttcgttaacaatgcaattgctttgtcaacttgatggattttgcataaagcat 29116316  T
Q  181 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatct 234  Q
     |||||||||||||||||||  ||||  |||| ||  ||||||||||| |||||    
T  29116315 ctaatatagaattgtaagtacgtatagtaggtggtacacctctatcatgcatct 29116262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 29085182 - 29085019
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||| |||||||||| |||||| ||  ||||| | |||||||||||||| ||||| ||||  ||||||||||| |||||||  |||||| |||||    
T  29085182 tccatcaataagaatagtgtatgtgtacatgcttggttgaataccctggtctttaaatttcgttatcaatgcaattgctttgtcaacttgatgggttttg 29085083  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatct 234  Q
     ||||||||| || ||||||||||||||||| ||||| |||| ||  ||||||||||| |||||    
T  29085082 aataaagcatctattatagaattgtaagtaagtatattaggtggtacacctctatcatgcatct 29085019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 29348433 - 29348597
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||| |||||||||| |||||| |||| |||| | || || |  |||||||  || ||||| || ||||||||||||||||  ||||||||||||    
T  29348433 tccatcaataagaatagtgtatgtgtacatatctggttgaattccttcatctttcatcttcgttaacaacgcaattgccttgtcaacctgatggtttttg 29348532  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    ||||||||||  ||||||||||||||||||||| ||||| || ||  ||||||||||| ||||||    
T  29348533 cataaagcatccaatatagaattgtaagtaattttatcatgtggtacacctctatcatgcatctc 29348597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 29889894 - 29889731
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||| |||||||||| ||| || | ||||||| | |||| ||||||||| ||||| ||| | ||||||||||  |||||||  |||||| |||||    
T  29889894 tccatcaataagaatagtgtatgtttacacatttggttgaatactctggtctttaaatttcgttgacaatgcaattgttttgtcaacctgatgggttttg 29889795  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatct 234  Q
    |||||||||| |||||||||||||||||| | ||||| |||| ||  ||||||||||| |||||    
T  29889794 cataaagcatctaatatagaattgtaagtgactatattaggtggtacacctctatcatgcatct 29889731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 29898168 - 29898077
Alignment:
Q  144 attgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||| |||| |||||||||| |||| ||||||||||||||| ||||||    
T  29898168 attgccttgtcaacctgatggtttttgcataaagcattcaatatagaactgtacgtaattatattaggtggttgacctctatcatgcatctc 29898077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 228
Target Start/End: Complemental strand, 29946579 - 29946444
Alignment:
Q  93 gtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaat 192  Q
    ||||| ||| ||||| | ||| |||||||||| | ||||||||| ||| ||||||||||||||| || || ||| ||||||||| |||  |||||||| |    
T  29946579 gtgtacatacttggttgaatatcctggtctttaagttttgttaaaaatacaattgccttgtcaacatcatagttcttgcataaaacatccaatatagagt 29946480  T
Q  193 tgtaagtaattatatcaggtagttgacctctatcat 228  Q
    ||||||||||||||| |||| |||||||||||||||    
T  29946479 tgtaagtaattatattaggtggttgacctctatcat 29946444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 29099465 - 29099344
Alignment:
Q  113 accctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggt 212  Q
    ||||| |||||| ||||| ||||| ||||||||||| |||||||  |||||| ||||||||||||||| |||||||||||||||||||  ||||| ||||    
T  29099465 acccttgtctttaaatttcgttaacaatgcaattgctttgtcaacttgatgggttttgcataaagcatctaatatagaattgtaagtacatatattaggt 29099366  T
Q  213 agttgacctctatcattcatct 234  Q
     ||  ||||||||||| |||||    
T  29099365 ggtacacctctatcatgcatct 29099344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 29366317 - 29366420
Alignment:
Q  132 gttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattca 231  Q
    ||||| || ||||||||||||||||  ||||||||||||||||||||||  ||||||||||||||||||||| ||||| || ||  ||||||||||| ||    
T  29366317 gttaacaacgcaattgccttgtcaacctgatggtttttgcataaagcatccaatatagaattgtaagtaattttatcatgtggtacacctctatcatgca 29366416  T
Q  232 tctc 235  Q
    ||||    
T  29366417 tctc 29366420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 29876932 - 29876825
Alignment:
Q  128 ttttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatca 227  Q
    |||| ||||||||||||| | ||| |||| ||||||  |||||||||||||||  ||||||||||||||||||||||||| |||| |||| |||||||||    
T  29876932 ttttcttaataatgcaatcgtcttctcaacatgatgaattttgcataaagcatacaatatagaattgtaagtaattatattaggtggttggcctctatca 29876833  T
Q  228 ttcatctc 235  Q
    | ||||||    
T  29876832 tgcatctc 29876825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 30999838 - 30999937
Alignment:
Q  136 ataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||  ||||||||| ||||| ||| ||||| |||| ||||||||||||||| ||||||    
T  30999838 ataatgcaattgcctggtcaacacgatggtttttgcataaagcatccaatatagaactgtaaataactatattaggtggttgacctctatcatgcatctc 30999937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 29949732 - 29949860
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||||||  || ||||||| ||| || ||||||||  | || || |||||||| |  ||| ||||||||||||| ||||||||||  ||||||||||||    
T  29949732 tccatcaacaagtatagtgtatgtatacatatttggctgaattccttggtcttttatcttttttaataatgcaatcgccttgtcaacctgatggtttttg 29949831  T
Q  171 cataaagcatttaatatagaattgtaagt 199  Q
    |||||||||| ||||| ||||||||||||    
T  29949832 cataaagcatctaataaagaattgtaagt 29949860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 24271853 - 24271946
Alignment:
Q  142 caattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    |||||||||||||||  |||||||||||||||||| |||  ||||||||| |||| || |||||||||||| |||| |||| ||||| ||||||    
T  24271853 caattgccttgtcaacctgatggtttttgcataaatcatccaatatagaactgtacgtgattatatcaggttgttgccctcgatcatgcatctc 24271946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 30149648 - 30149527
Alignment:
Q  114 ccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggta 213  Q
    ||||||||||| |  ||| ||||||||||||||||| ||||||  |||||||||||||| ||  |||  |||| |||||||||||| ||||| || | |     
T  30149648 ccctggtctttgatcttttttaataatgcaattgccctgtcaacctgatggtttttgcacaatccatcaaataaagaattgtaagtgattatgtcggttg 30149549  T
Q  214 gttgacctctatcattcatctc 235  Q
    ||||||||||||||| ||||||    
T  30149548 gttgacctctatcatgcatctc 30149527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 235
Target Start/End: Complemental strand, 25451270 - 25451118
Alignment:
Q  83 aatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcattt 182  Q
    |||||||| |||||| | ||||||| | ||||||| |||||| |||| | | |||||| ||||||| |  ||||  ||||| |||||  |||||||||      
T  25451270 aatagtgtatgtgtacacatttggttgaatacccttgtctttaaattctttaaataattcaattgcttcttcaacctgatgttttttcaataaagcatcc 25451171  T
Q  183 aatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    ||||||||| ||||||||| |||||  ||| ||||||||||||||| ||||||    
T  25451170 aatatagaactgtaagtaaatatatttggtggttgacctctatcatgcatctc 25451118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 16702057 - 16702123
Alignment:
Q  138 aatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaatta 204  Q
    ||||||||||||||||||| |||||||||||| |||||||||| |||||  ||||||||||| ||||    
T  16702057 aatgcaattgccttgtcaacatgatggtttttacataaagcatgtaataaggaattgtaagtgatta 16702123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 29953542 - 29953657
Alignment:
Q  84 atagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcattta 183  Q
    ||||||| ||| || ||||||||  | || || ||||||||||  ||  ||||||||||||| ||||||||||  |||||||||||||| |||||||  |    
T  29953542 atagtgtatgtatacatatttggctgaatcccttggtctttcatcttctttaataatgcaatcgccttgtcaacctgatggtttttgcacaaagcatcca 29953641  T
Q  184 atatagaattgtaagt 199  Q
    ||| ||||||||||||    
T  29953642 ataaagaattgtaagt 29953657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 24271799 - 24271857
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaatt 129  Q
    ||||||||| |||||||||| |||| | ||||||||||| |||||||||||||||||||    
T  24271799 tccatcaataagaatagtgtatgtgaacatatttggtcgaataccctggtctttcaatt 24271857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 30053543 - 30053442
Alignment:
Q  119 gtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttga 218  Q
    ||||||||  || ||||| || ||||||||||||||||  |||||||||||||| ||  ||| ||||| |||||||||||| ||||||| || | |||||    
T  30053543 gtctttcatcttcgttaacaacgcaattgccttgtcaacctgatggtttttgcacaatccatataataaagaattgtaagtgattatattagctggttga 30053444  T
Q  219 cc 220  Q
    ||    
T  30053443 cc 30053442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 29912126 - 29912051
Alignment:
Q  81 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaa 156  Q
    ||||| |||| |||||  |||| |||||| ||||| ||| ||||||||||||||||||||| |||||| |||||||    
T  29912126 agaatggtgtatgtgttcatatctggtcgaataccttggcctttcaattttgttaataatgtaattgctttgtcaa 29912051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 29914146 - 29914071
Alignment:
Q  81 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaa 156  Q
    |||||||||| |||||| | | ||||| | |||||||||||||| ||||| ||||| ||||||||||| |||||||    
T  29914146 agaatagtgtatgtgtacacacttggttgaataccctggtctttaaatttcgttaacaatgcaattgctttgtcaa 29914071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 15727090 - 15727152
Alignment:
Q  137 taatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagt 199  Q
    |||| |||||||||||||||  |||||||||||||||||||||| || ||  |||||||||||    
T  15727090 taatacaattgccttgtcaacgtgatggtttttgcataaagcatctattaacgaattgtaagt 15727152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 30061644 - 30061705
Alignment:
Q  20 agcatttggatagcaattattgtccttc---atttttgatagcaaagccaaggctccatcaa 78  Q
    ||||||||||| ||||||||||||| ||   ||||||||||||| |||||||||| ||||||    
T  30061644 agcatttggattgcaattattgtccgtcgtcatttttgatagcatagccaaggcttcatcaa 30061705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 29835561 - 29835504
Alignment:
Q  21 gcatttggatagcaattattgtccttcatttttgatagcaaagccaaggctccatcaa 78  Q
    ||||||||| ||||| ||||||| ||||||||||| | ||||||||| ||| ||||||    
T  29835561 gcatttggaaagcaactattgtctttcatttttgacaacaaagccaatgcttcatcaa 29835504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 29866995 - 29866938
Alignment:
Q  21 gcatttggatagcaattattgtccttcatttttgatagcaaagccaaggctccatcaa 78  Q
    ||||||||| ||||| ||||||| ||||||||||| | ||||||||| ||| ||||||    
T  29866995 gcatttggaaagcaactattgtctttcatttttgacaacaaagccaatgcttcatcaa 29866938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 29887643 - 29887586
Alignment:
Q  21 gcatttggatagcaattattgtccttcatttttgatagcaaagccaaggctccatcaa 78  Q
    ||||||||| ||||| ||||||| ||||||||||| | ||||||||| ||| ||||||    
T  29887643 gcatttggaaagcaactattgtctttcatttttgacaacaaagccaatgcttcatcaa 29887586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 199
Target Start/End: Complemental strand, 30135250 - 30135161
Alignment:
Q  111 ataccctggtctttcaattttgttaataatgcaattgccttgtcaata-tgatggtttttgcataaagcatttaatatagaattgtaagt 199  Q
    ||||| |||||||| |  || ||||||||||  |||||||||||||   |||||||||||||| |||||||  |||| ||||||||||||    
T  30135250 ataccttggtctttgatcttcgttaataatgtgattgccttgtcaaacctgatggtttttgcacaaagcatccaataaagaattgtaagt 30135161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 4301 - 4137
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 170  Q
    ||||| ||| |||||||||| |||||| ||||||||| | | |||||||||||||||||||||||||||||||||||||||||||    |||||||||||    
T  4301 tccattaataagaatagtgtatgtgtacatatttggttgaagaccctggtctttcaattttgttaataatgcaattgccttgtcacctggatggtttttg 4202  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    ||||||||||  |||| |||| |||||||||||||||||||| ||||||||||||||| ||||||    
T  4201 cataaagcatccaatagagaactgtaagtaattatatcaggtggttgacctctatcatgcatctc 4137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 24219116 - 24219236
Alignment:
Q  117 tggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagtt 216  Q
    |||||||| | ||||||||| ||| ||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||||||| |||| |||    
T  24219116 tggtctttaagttttgttaacaattcaattgccttgtcaacatgatggtttttgcataaagcatccaataaagaattgtaagtaattatattaggtggtt 24219215  T
Q  217 gacctctatcattcatctctc 237  Q
    |||||||||||| ||||||||    
T  24219216 gacctctatcatgcatctctc 24219236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 24226911 - 24226820
Alignment:
Q  144 attgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    |||||||||||||  |||||||||||||| ||  ||| ||||| |||||||||||| ||||| | || | ||||||||||||||| ||||||    
T  24226911 attgccttgtcaacctgatggtttttgcacaatccatctaataaagaattgtaagtgattatgttagctggttgacctctatcatgcatctc 24226820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 33998037 - 33997967
Alignment:
Q  138 aatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatc 208  Q
    |||| |||||||| ||| | |||||| ||||||||||||||||  |||| |||||| ||||| ||||||||    
T  33998037 aatgtaattgcctggtcgagatgatgatttttgcataaagcatgcaataaagaattataagtgattatatc 33997967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 16351214 - 16351086
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaa-taatgcaattgccttgtcaatatgatggttttt 169  Q
    ||||||||| || ||| ||| |||| | ||||||||| | || || || ||||| |||||| |||| ||||||||| |||||||||| ||| ||||||||    
T  16351214 tccatcaataagtatattgtatgtgcacatatttggttgaatgccatgttcttt-aattttcttaactaatgcaatagccttgtcaacatgttggttttt 16351116  T
Q  170 gcataaagcatttaatatagaattgtaagt 199  Q
    ||| ||| ||| ||  | ||||||||||||    
T  16351115 gcagaaaacatctatcaaagaattgtaagt 16351086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 22497 - 22343
Alignment:
Q  81 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 180  Q
    ||||| |||| |||||  |||| |||||| ||||| ||| ||||||||||||||||||||| |||||| ||||| | |||||| ||||||||||||||||    
T  22497 agaatggtgtatgtgttcatatctggtcgaataccttggcctttcaattttgttaataatgtaattgctttgtccacatgatgttttttgcataaagcat 22398  T
Q  181 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
      |||||||||||||||||||||||||||||| |||| |||| || || ||||||    
T  22397 ccaatatagaattgtaagtaattatatcaggttgttgccctcgataatgcatctc 22343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 15062737 - 15062868
Alignment:
Q  97 aaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgta 196  Q
    |||||| |||| | |||||||  ||||| | ||||||||||||  |||||||||| |||| ||||| ||||||||||| ||||| |||||||||||||||    
T  15062737 aaatatctggttgaatacccttctctttaatttttgttaataacacaattgccttatcaacatgattgtttttgcatatagcatctaatatagaattgta 15062836  T
Q  197 agtaattatatcaggtagttgacctctatcat 228  Q
    ||||||||||| || | |||||||||||||||    
T  15062837 agtaattatattagatggttgacctctatcat 15062868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 10130246 - 10130145
Alignment:
Q  126 aattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctat 225  Q
    |||||| |||| ||||| ||||| ||||||| ||| || |||| |||||||||||| |||| |||||||||||||||||||| |||| ||||||||||||    
T  10130246 aattttcttaacaatgcgattgctttgtcaacatggtgattttggcataaagcattcaataaagaattgtaagtaattatattaggttgttgacctctat 10130147  T
Q  226 ca 227  Q
    ||    
T  10130146 ca 10130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 17251411 - 17251313
Alignment:
Q  137 taatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    ||||||||||||||| ||||  |||||| ||||||| ||||||| ||  | |||| ||||||| |||| || |||| ||||||||||||||| ||||||    
T  17251411 taatgcaattgccttatcaacttgatggcttttgcacaaagcatctatcaaagaagtgtaagttattacattaggtggttgacctctatcatgcatctc 17251313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 19490374 - 19490258
Alignment:
Q  111 ataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcag 210  Q
    ||||| || ||||||| |||  ||| |||||| |||||||||||  | |||||  |||| |||||||||| ||||| |||||| ||||| |||| ||| |    
T  19490374 ataccttgatctttcattttgcttagtaatgctattgccttgtcggtttgatgacttttacataaagcatctaataaagaattataagttattacatcgg 19490275  T
Q  211 gtagttgacctctatca 227  Q
    || | ||||||||||||    
T  19490274 gtggctgacctctatca 19490258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 41316358 - 41316274
Alignment:
Q  137 taatgcaattgccttgtcaatatgatggtttttgcataaagcattta-atatagaattgtaagtaattatatcaggtagttgacc 220  Q
    ||||||||| |||||||||| ||||| | ||||||||||||||| || ||| |||| |||||||   |||||||||| |||||||    
T  41316358 taatgcaatagccttgtcaagatgattgcttttgcataaagcatctatataaagaactgtaagtggatatatcaggtggttgacc 41316274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 41198828 - 41198768
Alignment:
Q  148 ccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatc 208  Q
    ||||||||| |||||||||||| |||||||||| |||||  |||||| || | ||||||||    
T  41198828 ccttgtcaacatgatggtttttacataaagcatgtaataaggaattgcaactgattatatc 41198768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 53532 - 53595
Alignment:
Q  172 ataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 235  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  53532 ataaagcatttaatatagaattgtaagtaattatattaggtggttgacctctatcatgcatctc 53595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 3331 - 3241
Alignment:
Q  137 taatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatca 227  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| || ||  ||||||||||| |||||||||| | ||||||| ||||||    
T  3331 taatgcaatagccttgtcaacatgatggtttttgcataaagcatctattaatgaattgtaagtgattatatcagctggttgaccactatca 3241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 3643201 - 3643073
Alignment:
Q  71 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaa-taatgcaattgccttgtcaatatgatggttttt 169  Q
    ||||||||| || ||| ||| |||||| ||| ||||| | || ||||||||||| |||||| |||| ||||||||| || ||||||||||||||||||||    
T  3643201 tccatcaataagtatattgtatgtgtacatacttggttgaatgccctggtcttt-aattttcttaactaatgcaatagctttgtcaatatgatggttttt 3643103  T
Q  170 gcataaagcatttaatatagaattgtaagt 199  Q
    ||||||| ||| ||  | ||||||||||||    
T  3643102 gcataaaacatctatcaaagaattgtaagt 3643073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 137537 - 137389
Alignment:
Q  72 ccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaa-taatgcaattgccttgtcaatatgatggtttttg 170  Q
    |||||||| || ||| ||| |||||| ||||||||| | || || |||||||| |||||| || | ||||||||| || ||||||| ||||| |||||||    
T  137537 ccatcaataagtatattgtatgtgtacatatttggttgaatgccttggtcttt-aattttcttgactaatgcaatagctttgtcaagatgattgtttttg 137439  T
Q  171 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacc 220  Q
    |||||||||| || || |||| |||| |||| ||| |||||| |||||||    
T  137438 cataaagcatctattaaagaactgtaggtaaatatgtcaggtggttgacc 137389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 121382 - 121478
Alignment:
Q  138 aatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatct 234  Q
    |||||||||||||||||||  ||||| ||||||||||||||||  ||||  |||||||| || || ||||  |   ||||||||||||||| |||||    
T  121382 aatgcaattgccttgtcaacttgatgatttttgcataaagcatgcaataaggaattgtatgtgataatattggcaggttgacctctatcatgcatct 121478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 104652 - 104722
Alignment:
Q  150 ttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacc 220  Q
    ||||||| ||||| ||||||||||||||||| || || |||| ||||||||| ||| | |||| |||||||    
T  104652 ttgtcaagatgattgtttttgcataaagcatctattaaagaactgtaagtaaatatgttaggtggttgacc 104722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 126024 - 126086
Alignment:
Q  137 taatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagt 199  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| || ||  |||||||||||    
T  126024 taatgcaatagccttgtcaatctgatggtttttgcataaagcatctattaaggaattgtaagt 126086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 6294 - 6211
Alignment:
Q  137 taatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacc 220  Q
    |||| |||| |||||||||| |||||||||||||||||| |||| || || ||||||||||||   ||| |||||| |||||||    
T  6294 taatacaatagccttgtcaacatgatggtttttgcataatgcatctattaaagaattgtaagtgcatatgtcaggtggttgacc 6211  T

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Target: scaffold0051 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 47804 - 47866
Alignment:
Q  137 taatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagt 199  Q
    ||||||||| ||||||||||  |||| |||||||||||||| ||||| || ||||||||||||    
T  47804 taatgcaatagccttgtcaacctgatagtttttgcataaagaatttattaaagaattgtaagt 47866  T

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Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 43201 - 43269
Alignment:
Q  152 gtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacc 220  Q
    ||||| |||||||||||||||||| |||| || || ||||||||||||   ||| |||||| |||||||    
T  43201 gtcaacatgatggtttttgcataatgcatctattaaagaattgtaagtgcatatgtcaggttgttgacc 43269  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 44262489 - 44262556
Alignment:
Q  132 gttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagt 199  Q
    ||||||||||  |||||||||||||  |||||||||||||| |||||||  ||||  |||||||||||    
T  44262489 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 44262556  T

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Target: scaffold0654 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 1122 - 1183
Alignment:
Q  138 aatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagt 199  Q
    |||||||||||||||||||  ||||||||||| |||||||| | ||| |  |||||||||||    
T  1122 aatgcaattgccttgtcaacttgatggtttttacataaagcgtgtaagaaggaattgtaagt 1183  T

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Target: chr8 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 9782655 - 9782594
Alignment:
Q  119 gtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 180  Q
    ||||||||  |||||||| || ||||||||||||||||  |||||| ||||||| |||||||    
T  9782655 gtctttcatctttgttaacaacgcaattgccttgtcaacctgatggattttgcacaaagcat 9782594  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 1197 - 1293
Alignment:
Q  138 aatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatct 234  Q
    |||||||||||||||||||  ||||| ||||| |||||||| | ||| |  ||||||||||| || | ||| |   ||||||||||||||| |||||    
T  1197 aatgcaattgccttgtcaacttgatgatttttacataaagcgtgtaagaaggaattgtaagtgatcacatcggcaggttgacctctatcatgcatct 1293  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 31220 - 31264
Alignment:
Q  142 caattgccttgtcaatatgatggtttttgcataaagcatttaata 186  Q
    |||| |||||||||| |||||||||||| |||||||||| |||||    
T  31220 caatggccttgtcaacatgatggtttttacataaagcatgtaata 31264  T

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