View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17760_low_19 (Length: 212)
Name: NF17760_low_19
Description: NF17760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17760_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 22 - 198
Target Start/End: Complemental strand, 23784293 - 23784117
Alignment:
| Q |
22 |
atgagaaaatccaaaaatcaaaatgaatgacatcacaacatgatgtggttggagaagaacaaaaagagcaataatgatgagtagcttaaacttaaccctt |
121 |
Q |
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| T |
23784293 |
atgagaaaatccaaaaatcaaaatgaatgacatcacaacatgatgtggttggagaagaacaaaaagagtaataatgatgagtagcttaaacttaaccctt |
23784194 |
T |
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| Q |
122 |
gaaatataaggaaccaaactaacttagtgtagcccacactttcactaccaaacaatgttttacaacctatggatact |
198 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23784193 |
gaaatataagtaaccaaactaacttagtgtagcccacactttcactaccaaacaatgttttacaacctatggatact |
23784117 |
T |
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