View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17760_low_6 (Length: 405)

Name: NF17760_low_6
Description: NF17760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17760_low_6
NF17760_low_6
[»] chr8 (40 HSPs)
chr8 (260-388)||(40724121-40724248)
chr8 (28-122)||(2704453-2704547)
chr8 (28-122)||(42734977-42735070)
chr8 (26-81)||(7506681-7506736)
chr8 (28-122)||(5576315-5576407)
chr8 (28-122)||(42936974-42937067)
chr8 (28-122)||(42937827-42937920)
chr8 (25-81)||(8543731-8543787)
chr8 (28-82)||(24501542-24501596)
chr8 (28-82)||(26374080-26374134)
chr8 (190-261)||(33850971-33851042)
chr8 (28-81)||(41479557-41479610)
chr8 (190-266)||(42936785-42936862)
chr8 (190-261)||(5576132-5576203)
chr8 (190-260)||(42734814-42734884)
chr8 (190-260)||(42938023-42938093)
chr8 (190-258)||(7506439-7506507)
chr8 (28-79)||(23114992-23115043)
chr8 (193-257)||(24501324-24501388)
chr8 (190-258)||(32711129-32711197)
chr8 (219-265)||(26373865-26373911)
chr8 (190-260)||(10391693-10391763)
chr8 (190-255)||(41479785-41479850)
chr8 (189-257)||(23114771-23114839)
chr8 (39-122)||(33574718-33574799)
chr8 (190-257)||(43960089-43960156)
chr8 (219-264)||(13477810-13477855)
chr8 (190-258)||(24214690-24214758)
chr8 (190-258)||(37915544-37915612)
chr8 (28-61)||(10391996-10392029)
chr8 (224-265)||(32498950-32498991)
chr8 (224-260)||(18305076-18305112)
chr8 (224-264)||(18957829-18957869)
chr8 (224-264)||(34893417-34893457)
chr8 (224-260)||(39189449-39189485)
chr8 (222-253)||(26373780-26373811)
chr8 (224-262)||(16365336-16365374)
chr8 (28-61)||(26374164-26374197)
chr8 (224-260)||(14781247-14781283)
chr8 (219-255)||(29930308-29930344)
[»] chr2 (46 HSPs)
chr2 (28-122)||(35317510-35317604)
chr2 (28-122)||(1789837-1789930)
chr2 (28-82)||(24776698-24776752)
chr2 (28-82)||(31170286-31170340)
chr2 (28-122)||(12407788-12407881)
chr2 (28-122)||(16270172-16270265)
chr2 (28-122)||(21136760-21136853)
chr2 (28-82)||(9120516-9120570)
chr2 (190-265)||(24776903-24776978)
chr2 (28-119)||(43848000-43848091)
chr2 (190-264)||(32125875-32125949)
chr2 (26-82)||(305315-305371)
chr2 (190-261)||(22551372-22551443)
chr2 (28-82)||(22551565-22551619)
chr2 (28-82)||(32125689-32125743)
chr2 (190-260)||(20605529-20605599)
chr2 (190-260)||(35317716-35317786)
chr2 (190-259)||(12407974-12408043)
chr2 (190-259)||(12420034-12420103)
chr2 (26-82)||(44766276-44766332)
chr2 (28-82)||(14198404-14198456)
chr2 (190-253)||(31170101-31170164)
chr2 (190-260)||(21136588-21136658)
chr2 (190-258)||(305097-305164)
chr2 (190-258)||(9120720-9120788)
chr2 (193-261)||(44766486-44766554)
chr2 (190-253)||(1790018-1790081)
chr2 (28-69)||(26601065-26601106)
chr2 (190-258)||(43848206-43848274)
chr2 (190-253)||(14198189-14198252)
chr2 (190-260)||(16270378-16270449)
chr2 (28-61)||(16270110-16270143)
chr2 (28-61)||(35317447-35317480)
chr2 (221-261)||(1188674-1188714)
chr2 (224-264)||(10658489-10658529)
chr2 (219-259)||(11997194-11997234)
chr2 (224-260)||(33136656-33136692)
chr2 (221-260)||(20156343-20156382)
chr2 (221-264)||(21988348-21988391)
chr2 (222-255)||(10124997-10125030)
chr2 (28-61)||(44766215-44766248)
chr2 (224-260)||(214624-214660)
chr2 (224-260)||(379969-380005)
chr2 (224-260)||(18178331-18178367)
chr2 (224-260)||(25289214-25289250)
chr2 (224-260)||(26789844-26789880)
[»] chr1 (52 HSPs)
chr1 (28-122)||(730507-730600)
chr1 (28-122)||(955910-956004)
chr1 (28-122)||(6303956-6304048)
chr1 (28-82)||(19451491-19451545)
chr1 (28-82)||(33085555-33085609)
chr1 (28-122)||(21222584-21222677)
chr1 (28-122)||(45759639-45759732)
chr1 (29-121)||(29556398-29556489)
chr1 (28-82)||(47654057-47654111)
chr1 (190-260)||(6303774-6303844)
chr1 (28-122)||(28824063-28824157)
chr1 (190-260)||(35280295-35280365)
chr1 (33-81)||(50192323-50192371)
chr1 (28-82)||(47781088-47781142)
chr1 (28-82)||(49197981-49198035)
chr1 (36-118)||(35280107-35280188)
chr1 (25-122)||(35678940-35679035)
chr1 (190-260)||(45759457-45759527)
chr1 (190-258)||(50192072-50192140)
chr1 (28-82)||(48524925-48524979)
chr1 (190-261)||(49197759-49197830)
chr1 (190-260)||(19451280-19451350)
chr1 (28-122)||(45536422-45536515)
chr1 (190-258)||(956097-956165)
chr1 (29-112)||(31572035-31572119)
chr1 (190-261)||(28823880-28823951)
chr1 (190-260)||(730712-730782)
chr1 (219-264)||(35678756-35678801)
chr1 (190-263)||(47781283-47781357)
chr1 (28-122)||(49418401-49418493)
chr1 (219-259)||(29209503-29209543)
chr1 (219-255)||(33026176-33026212)
chr1 (193-258)||(48525113-48525178)
chr1 (28-61)||(19451575-19451608)
chr1 (190-252)||(37014327-37014389)
chr1 (27-83)||(37014484-37014541)
chr1 (28-61)||(45759762-45759795)
chr1 (28-61)||(47654141-47654174)
chr1 (219-260)||(47784837-47784878)
chr1 (28-61)||(49198065-49198098)
chr1 (221-260)||(1923095-1923134)
chr1 (224-267)||(29395530-29395573)
chr1 (219-258)||(31571845-31571884)
chr1 (224-259)||(49232043-49232078)
chr1 (190-258)||(49418596-49418664)
chr1 (219-257)||(29556601-29556639)
chr1 (219-253)||(47653843-47653877)
chr1 (224-261)||(15835375-15835412)
chr1 (224-261)||(46329027-46329064)
chr1 (224-260)||(6313635-6313671)
chr1 (224-260)||(25613151-25613187)
chr1 (224-260)||(28386557-28386593)
[»] chr6 (25 HSPs)
chr6 (28-122)||(6197121-6197214)
chr6 (28-82)||(2238791-2238845)
chr6 (28-82)||(29077080-29077134)
chr6 (190-260)||(2300148-2300218)
chr6 (190-260)||(6196939-6197009)
chr6 (28-82)||(1392010-1392064)
chr6 (28-82)||(29112052-29112106)
chr6 (28-82)||(2300369-2300424)
chr6 (219-261)||(10344924-10344966)
chr6 (190-258)||(1392206-1392274)
chr6 (28-75)||(28002995-28003042)
chr6 (190-258)||(3608053-3608121)
chr6 (219-266)||(7052432-7052479)
chr6 (221-259)||(23929371-23929409)
chr6 (28-61)||(6197244-6197277)
chr6 (222-258)||(29114867-29114903)
chr6 (223-258)||(5160950-5160985)
chr6 (219-257)||(2239017-2239055)
chr6 (234-263)||(4199583-4199612)
chr6 (224-261)||(7498159-7498196)
chr6 (28-61)||(29077017-29077050)
chr6 (28-61)||(29111989-29112022)
chr6 (224-260)||(30384171-30384207)
chr6 (224-260)||(31068479-31068515)
chr6 (224-260)||(31896696-31896732)
[»] chr5 (25 HSPs)
chr5 (28-122)||(139632-139725)
chr5 (28-122)||(33655762-33655856)
chr5 (28-120)||(21147555-21147646)
chr5 (28-122)||(849705-849798)
chr5 (28-122)||(6461152-6461245)
chr5 (28-122)||(7016447-7016540)
chr5 (190-258)||(27458680-27458748)
chr5 (190-261)||(849901-849972)
chr5 (193-260)||(21147760-21147827)
chr5 (28-82)||(32157739-32157793)
chr5 (190-260)||(5272437-5272507)
chr5 (29-82)||(43319439-43319492)
chr5 (31-82)||(4771977-4772028)
chr5 (190-261)||(33655579-33655650)
chr5 (190-260)||(43319227-43319297)
chr5 (28-122)||(5272619-5272714)
chr5 (190-258)||(4771768-4771836)
chr5 (190-257)||(7016268-7016335)
chr5 (219-263)||(139857-139901)
chr5 (28-61)||(21147492-21147525)
chr5 (224-260)||(28592999-28593035)
chr5 (219-264)||(6461377-6461425)
chr5 (224-261)||(4239578-4239615)
chr5 (224-260)||(13999213-13999249)
chr5 (224-260)||(40012816-40012852)
[»] chr4 (69 HSPs)
chr4 (28-122)||(25446495-25446588)
chr4 (28-122)||(40536736-40536830)
chr4 (28-82)||(25331485-25331539)
chr4 (28-82)||(32952049-32952103)
chr4 (28-82)||(41880795-41880849)
chr4 (24-122)||(7249679-7249775)
chr4 (28-122)||(34228331-34228424)
chr4 (29-82)||(37046303-37046356)
chr4 (28-118)||(49469621-49469711)
chr4 (28-82)||(7007691-7007745)
chr4 (28-82)||(22202467-22202521)
chr4 (28-82)||(24130672-24130726)
chr4 (28-82)||(28541898-28541952)
chr4 (190-260)||(22202672-22202742)
chr4 (190-260)||(24130460-24130530)
chr4 (28-81)||(30009513-30009566)
chr4 (190-259)||(25446680-25446749)
chr4 (190-258)||(55975165-55975233)
chr4 (28-82)||(53276181-53276235)
chr4 (25-81)||(1045118-1045174)
chr4 (28-76)||(3436930-3436978)
chr4 (190-255)||(25331692-25331757)
chr4 (29-81)||(42787026-42787078)
chr4 (190-261)||(34228158-34228229)
chr4 (190-257)||(41880594-41880661)
chr4 (28-81)||(7246907-7246960)
chr4 (190-260)||(31314422-31314492)
chr4 (33-81)||(27453929-27453977)
chr4 (190-258)||(7007896-7007964)
chr4 (190-258)||(7246547-7246615)
chr4 (26-73)||(23465275-23465322)
chr4 (38-122)||(31314585-31314668)
chr4 (219-258)||(37046093-37046132)
chr4 (46-122)||(41321119-41321194)
chr4 (190-258)||(49469818-49469886)
chr4 (190-257)||(3437137-3437204)
chr4 (190-253)||(46635241-46635304)
chr4 (28-118)||(55974971-55975059)
chr4 (190-264)||(8712364-8712438)
chr4 (190-260)||(32952244-32952314)
chr4 (34-82)||(1113545-1113593)
chr4 (190-266)||(40536557-40536634)
chr4 (193-258)||(42787224-42787289)
chr4 (224-263)||(5105001-5105040)
chr4 (222-261)||(12913899-12913938)
chr4 (219-258)||(16020686-16020725)
chr4 (219-258)||(28542122-28542161)
chr4 (223-257)||(26340620-26340654)
chr4 (221-263)||(28099680-28099722)
chr4 (219-261)||(44770482-44770524)
chr4 (219-261)||(45341625-45341667)
chr4 (223-256)||(30009296-30009329)
chr4 (219-258)||(23465533-23465573)
chr4 (190-251)||(47599356-47599417)
chr4 (222-257)||(28371466-28371501)
chr4 (190-258)||(41321297-41321365)
chr4 (28-78)||(16020476-16020526)
chr4 (193-252)||(39479133-39479192)
chr4 (223-261)||(42722006-42722044)
chr4 (28-61)||(22202404-22202437)
chr4 (224-261)||(32683133-32683170)
chr4 (222-263)||(36727575-36727616)
chr4 (224-260)||(5442450-5442486)
chr4 (187-252)||(7249548-7249613)
chr4 (228-260)||(16019911-16019943)
chr4 (224-260)||(27769123-27769159)
chr4 (224-260)||(37369431-37369467)
chr4 (224-260)||(48262134-48262170)
chr4 (223-259)||(56444379-56444415)
[»] chr3 (66 HSPs)
chr3 (28-122)||(16008270-16008363)
chr3 (28-122)||(33807344-33807437)
chr3 (28-122)||(51699229-51699322)
chr3 (29-122)||(33996171-33996263)
chr3 (28-82)||(3205726-3205780)
chr3 (28-82)||(3999349-3999403)
chr3 (28-82)||(20498630-20498684)
chr3 (28-122)||(29448616-29448709)
chr3 (28-122)||(44761799-44761892)
chr3 (28-82)||(19254318-19254372)
chr3 (28-82)||(53928859-53928913)
chr3 (190-260)||(995482-995552)
chr3 (190-260)||(3999147-3999217)
chr3 (24-81)||(10138968-10139025)
chr3 (190-263)||(44761614-44761687)
chr3 (190-258)||(6590119-6590187)
chr3 (190-258)||(25418985-25419053)
chr3 (28-82)||(52080313-52080367)
chr3 (190-263)||(33995986-33996059)
chr3 (33-122)||(52114949-52115038)
chr3 (33-122)||(54625913-54626002)
chr3 (190-258)||(10138725-10138793)
chr3 (190-258)||(19254513-19254581)
chr3 (28-82)||(1439727-1439781)
chr3 (190-253)||(20498835-20498898)
chr3 (190-260)||(16008097-16008167)
chr3 (190-255)||(54626114-54626179)
chr3 (193-257)||(33807165-33807229)
chr3 (219-258)||(35338338-35338377)
chr3 (39-81)||(6589925-6589967)
chr3 (219-265)||(53928642-53928688)
chr3 (29-73)||(995710-995754)
chr3 (190-251)||(1439521-1439582)
chr3 (222-258)||(12108133-12108169)
chr3 (190-259)||(29448436-29448505)
chr3 (47-82)||(25418803-25418838)
chr3 (222-264)||(50899247-50899289)
chr3 (190-253)||(51699054-51699117)
chr3 (223-261)||(52080613-52080651)
chr3 (28-61)||(3205810-3205843)
chr3 (28-61)||(3205873-3205906)
chr3 (28-61)||(3205936-3205969)
chr3 (222-259)||(15492404-15492441)
chr3 (190-256)||(40247358-40247424)
chr3 (224-260)||(7319139-7319175)
chr3 (224-264)||(11432606-11432646)
chr3 (222-258)||(39842119-39842155)
chr3 (224-264)||(45135759-45135799)
chr3 (224-260)||(52617086-52617122)
chr3 (234-265)||(26108499-26108530)
chr3 (28-79)||(40247142-40247193)
chr3 (222-261)||(46750027-46750066)
chr3 (224-259)||(54629912-54629947)
chr3 (190-253)||(6131014-6131077)
chr3 (222-259)||(6976258-6976295)
chr3 (224-261)||(10728123-10728160)
chr3 (28-61)||(16008393-16008426)
chr3 (224-261)||(17947279-17947316)
chr3 (28-61)||(19254255-19254288)
chr3 (224-261)||(31645362-31645399)
chr3 (28-61)||(33996294-33996327)
chr3 (219-248)||(38772557-38772586)
chr3 (28-61)||(53928943-53928976)
chr3 (224-264)||(24149832-24149872)
chr3 (224-260)||(27239326-27239362)
chr3 (224-260)||(36673259-36673295)
[»] scaffold0151 (3 HSPs)
scaffold0151 (30-118)||(24717-24805)
scaffold0151 (30-118)||(37234-37322)
scaffold0151 (190-258)||(24533-24601)
[»] chr7 (59 HSPs)
chr7 (28-82)||(44343219-44343273)
chr7 (28-82)||(47879533-47879587)
chr7 (28-82)||(47914611-47914665)
chr7 (28-122)||(977194-977287)
chr7 (28-122)||(7113770-7113864)
chr7 (24-122)||(43679612-43679708)
chr7 (28-121)||(8078482-8078574)
chr7 (28-121)||(43580797-43580890)
chr7 (26-122)||(40996310-40996404)
chr7 (28-119)||(7718053-7718144)
chr7 (190-261)||(12893985-12894056)
chr7 (28-122)||(12893790-12893883)
chr7 (28-122)||(39219063-39219156)
chr7 (190-260)||(44343000-44343070)
chr7 (28-82)||(34009396-34009450)
chr7 (35-121)||(727817-727902)
chr7 (33-78)||(31401768-31401813)
chr7 (190-263)||(18916440-18916513)
chr7 (33-81)||(34695664-34695712)
chr7 (190-259)||(39218882-39218951)
chr7 (30-82)||(43392245-43392297)
chr7 (190-258)||(34695896-34695964)
chr7 (190-257)||(7718802-7718869)
chr7 (28-82)||(7719020-7719074)
chr7 (190-253)||(34009582-34009645)
chr7 (190-260)||(8078687-8078757)
chr7 (190-260)||(47879729-47879799)
chr7 (190-260)||(47914807-47914877)
chr7 (35-78)||(727727-727770)
chr7 (190-258)||(728014-728082)
chr7 (190-258)||(31401961-31402029)
chr7 (190-258)||(43392026-43392094)
chr7 (190-257)||(7717871-7717938)
chr7 (222-260)||(12964060-12964098)
chr7 (28-122)||(30441543-30441634)
chr7 (190-260)||(40996128-40996198)
chr7 (222-266)||(3796695-3796739)
chr7 (219-263)||(9180375-9180419)
chr7 (190-258)||(977399-977467)
chr7 (224-271)||(29894016-29894063)
chr7 (219-262)||(43580613-43580655)
chr7 (224-270)||(9881390-9881436)
chr7 (190-258)||(20274900-20274967)
chr7 (28-61)||(30441480-30441513)
chr7 (28-61)||(40996429-40996462)
chr7 (223-259)||(3635186-3635222)
chr7 (224-264)||(21068417-21068457)
chr7 (190-259)||(30441740-30441809)
chr7 (219-258)||(7113986-7114025)
chr7 (219-258)||(31639227-31639266)
chr7 (219-256)||(835092-835129)
chr7 (219-256)||(1200272-1200309)
chr7 (224-261)||(3023983-3024020)
chr7 (28-61)||(39219186-39219219)
chr7 (224-260)||(23102350-23102386)
chr7 (224-260)||(39785157-39785193)
chr7 (187-252)||(43679774-43679839)
chr7 (224-264)||(46035444-46035484)
chr7 (220-256)||(46121680-46121716)
[»] scaffold0400 (2 HSPs)
scaffold0400 (28-122)||(14761-14855)
scaffold0400 (193-246)||(14593-14646)
[»] scaffold0365 (2 HSPs)
scaffold0365 (28-122)||(15404-15498)
scaffold0365 (193-246)||(15236-15289)
[»] scaffold0113 (2 HSPs)
scaffold0113 (28-79)||(37879-37930)
scaffold0113 (193-258)||(37666-37731)
[»] scaffold0276 (1 HSPs)
scaffold0276 (28-82)||(336-390)
[»] scaffold0287 (1 HSPs)
scaffold0287 (223-259)||(10863-10899)
[»] scaffold0940 (1 HSPs)
scaffold0940 (224-261)||(3572-3609)
[»] scaffold0492 (1 HSPs)
scaffold0492 (224-261)||(12095-12132)
[»] scaffold0110 (1 HSPs)
scaffold0110 (234-263)||(38746-38775)


Alignment Details
Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 260 - 388
Target Start/End: Complemental strand, 40724248 - 40724121
Alignment:
Q  260 ctaaaatcatctcatctaagcatttatgaatattagcaccgttatcaaattgttagaatgaagtttttctctaaaatagagtttgtcgccctatcaataa 359  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40724248 ctaaaatcatctcatctaagcatttatgaatattagcactcttaacaa-ttgttagaatgaagtttttctctgaaatagagtttgtcgccctatcaataa 40724150  T
Q  360 tgaattgtttcaagcggtgagatatttga 388  Q
    |||||||||||||||||||||||||||||    
T  40724149 tgaattgtttcaagcggtgagatatttga 40724121  T

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Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 2704547 - 2704453
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| |||||||||||| |||||||||    
T  2704547 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctgttg 2704453  T

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Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 42735070 - 42734977
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  42735070 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 42734977  T

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Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 7506736 - 7506681
Alignment:
Q  26 aaaaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7506736 aaaaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 7506681  T

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Target: chr8; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 5576407 - 5576315
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||| |||| ||||    
T  5576407 aaaataaataaaagagtctttattgagattttgtgaaagatagtgtgttatgata--ttttttcaattattttttaaaattcataaaatccgttg 5576315  T

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Target: chr8; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 42937067 - 42936974
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  42937067 aaaatgaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 42936974  T

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Target: chr8; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 42937827 - 42937920
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  42937827 aaaataaataaaatagtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 42937920  T

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Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 8543731 - 8543787
Alignment:
Q  25 taaaaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 81  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8543731 taaaaaataaataaacgagtctttattgagattttgtgaaagagagtgtgttatgat 8543787  T

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Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 24501596 - 24501542
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24501596 aaaataaataaaagagtatttattgagattttgtgaaagagagtgtgttatgata 24501542  T

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Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 26374134 - 26374080
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26374134 aaaataaataaaagagtctttgttgagattttgtgaaagagagtgtgttatgata 26374080  T

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Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 33850971 - 33851042
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  33850971 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 33851042  T

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Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 41479557 - 41479610
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 81  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41479557 aaaataaataaaagagtttttattgagattttgtgaaagagagtgtgttatgat 41479610  T

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Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 42936862 - 42936785
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc-cctaaaat 266  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42936862 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccctcctaaaat 42936785  T

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Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 5576203 - 5576132
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    |||||||||||||||| |||||       |||||||||||||||||||||||||||||||||||||||||||    
T  5576203 aagtcttttaaaatccccaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 5576132  T

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Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 42734884 - 42734814
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||||||    
T  42734884 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaatacaccccc 42734814  T

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Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 42938023 - 42938093
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||||||| ||||||||||||||||||||||||||    
T  42938023 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtccattaaaatcctaatccaatacaccccc 42938093  T

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Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 7506507 - 7506439
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||| ||||       ||||||||||||||||||||||||||||||||||||||||    
T  7506507 aagtcttttaaaatccttaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 7506439  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 23115043 - 23114992
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatg 79  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  23115043 aaaataaataaaaaattctttattgagattttgtgaaagagagtgtgttatg 23114992  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 24501388 - 24501324
Alignment:
Q  193 tcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  24501388 tcttttaaaatcctcaagatttttttaaacaaaaattgtcctttaaaatcctaatccaatacacc 24501324  T

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Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 32711197 - 32711129
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||||    
T  32711197 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaatacaccc 32711129  T

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Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 26373911 - 26373865
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccccctaaaa 265  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  26373911 aaacaaaaattgtcctttaaaatcctaatccagtacaccccctaaaa 26373865  T

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Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 10391763 - 10391693
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||| ||||||||||| ||||||||||||||||||    
T  10391763 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaattctaatccaatacaccccc 10391693  T

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Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 41479785 - 41479850
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaataca 255  Q
    ||||||||||||||||||||||       ||||||||||| |||||||||||||||||||||||||    
T  41479785 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaataca 41479850  T

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Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 23114839 - 23114771
Alignment:
Q  189 caagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    ||||||||||||||||||||| |       |||||||||||||||||||||||||||||| ||||||||    
T  23114839 caagtcttttaaaatcctcaaaacttttttaaacaaaaattgtcctttaaaatcctaatctaatacacc 23114771  T

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Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 33574718 - 33574799
Alignment:
Q  39 aagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||| |||||||||||||||  |||||||||||        |||||||||||||||||||||| |||||||||    
T  33574718 aagagtctttattgaaattttgtgaaagaga--gtgttatgatatattttttcaattattttttaaaattcataaaatctgttg 33574799  T

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Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 43960089 - 43960156
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    ||||||||||||||| ||||||       ||||||||||||||||||||||||||| |||||||||||    
T  43960089 aagtcttttaaaatcttcaagatttttttaaacaaaaattgtcctttaaaatcctagtccaatacacc 43960156  T

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Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 13477855 - 13477810
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||    
T  13477855 aaacaaaaattatcctttaaaatcctaatccaatacaccctctaaa 13477810  T

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Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 24214758 - 24214690
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||||||||||||||||        |||||||||||||| |||||||||||||| ||||||||||    
T  24214758 aagtcttttaaaatcctcaaggcttttttaaacaaaaattgtcttttaaaatcctaattcaatacaccc 24214690  T

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Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 37915544 - 37915612
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||||||||||||| |||       |||||||||||||| |||||||||||||||||||| ||||    
T  37915544 aagtcttttaaaatcctctagaattttttaaacaaaaattgtcatttaaaatcctaatccaatataccc 37915612  T

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Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 10392029 - 10391996
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  10392029 aaaataaataaaagagtctttattgagattttgt 10391996  T

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Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 32498950 - 32498991
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaaaa 265  Q
    ||||| ||| ||||||||||||||||||||||||||||||||    
T  32498950 aaaatagtcttttaaaatcctaatccaatacaccccctaaaa 32498991  T

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Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 18305112 - 18305076
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||| |||||||||||||||||||||||||||    
T  18305112 aaaattgtcttttaaaatcctaatccaatacaccccc 18305076  T

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Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 18957869 - 18957829
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  18957869 aaaatagtcttttaaaatcctaatccaatacaccccctaaa 18957829  T

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Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 34893417 - 34893457
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  34893417 aaaatagtcttttaaaatcctaatccaatacaccccctaaa 34893457  T

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Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 39189485 - 39189449
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||||| |||||||||||    
T  39189485 aaaattgtcctttaaaatcctaatctaatacaccccc 39189449  T

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Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 253
Target Start/End: Original strand, 26373780 - 26373811
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaata 253  Q
    ||||||||||||||||||||||||||||||||    
T  26373780 caaaaattgtcctttaaaatcctaatccaata 26373811  T

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Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 16365336 - 16365374
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacacccccta 262  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  16365336 aaaattgtcttttaaaatcctaattcaatacacccccta 16365374  T

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Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 26374197 - 26374164
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||| ||||||||||||||||||||||||    
T  26374197 aaaataaattaaagagtctttattgagattttgt 26374164  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 14781283 - 14781247
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  14781283 aaaatagtcttttaaaatcctaatccaatacaccccc 14781247  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 29930344 - 29930308
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaataca 255  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  29930344 aaacaaaaattatcctttaaaatcctaatccagtaca 29930308  T

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Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 35317510 - 35317604
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| |||||||||||| |||||||||    
T  35317510 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctgttg 35317604  T

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Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 1789837 - 1789930
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  1789837 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 1789930  T

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Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 24776698 - 24776752
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776698 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 24776752  T

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Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 31170340 - 31170286
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31170340 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 31170286  T

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Target: chr2; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 12407788 - 12407881
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  12407788 aaaataaataaaagagtctttgttgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 12407881  T

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Target: chr2; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 16270172 - 16270265
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |       ||||||||| |||||||||||| |||||||||    
T  16270172 aaaataaataaaagagtctttattgagattttgtgaaagagagtgcgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 16270265  T

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Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 21136853 - 21136760
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |       ||||||||||| |||||||||| |||||||||    
T  21136853 aaaataaataaaagagtctttattgagattttgtgaaaaagagtgtgttatgat-atttttttcaattatttttaaaaattcataaaatctgttg 21136760  T

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Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 9120516 - 9120570
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9120516 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttgtgata 9120570  T

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Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 24776903 - 24776978
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccctaaaa 265  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||||||||||||||    
T  24776903 aagtcttttaaaatcctcaagacttttttaaagaaaaattgtcctttaaaatcctaatccaatacaccccctaaaa 24776978  T

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Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 43848000 - 43848091
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctg 119  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||        ||||||||| |||||||||||| ||||||    
T  43848000 aaaataaataaaagagtctttatttaaattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctg 43848091  T

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Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 264
Target Start/End: Original strand, 32125875 - 32125949
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||||||||||    
T  32125875 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaatacaccccctaaa 32125949  T

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Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 305371 - 305315
Alignment:
Q  26 aaaaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  305371 aaaaaataaataaaagagtctttattgagattttgtgaaagagattatgttatgata 305315  T

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Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 22551443 - 22551372
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||| ||||||||||||||||||    
T  22551443 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaatccaatacaccccct 22551372  T

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Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 22551619 - 22551565
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  22551619 aaaataaataaaagagtttttattgagattttgcgaaagagagtgtgttatgata 22551565  T

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Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 32125689 - 32125743
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  32125689 aaaataaataaaagagtctttattgaaattttatgaaagagagtgtgttatgata 32125743  T

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Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 20605529 - 20605599
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||||||    
T  20605529 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaatacaccccc 20605599  T

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Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 35317716 - 35317786
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    |||||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||||||||    
T  35317716 aagtcttttaaaatcctcaatacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 35317786  T

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Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 12407974 - 12408043
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    ||||||||||||||||||||||       ||||||||||| |||||||||||||||||||||||||||||    
T  12407974 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaatacacccc 12408043  T

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Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 12420034 - 12420103
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    ||||||||||||||||||||||       ||||||||||| |||||||||||||||||||||||||||||    
T  12420034 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaatacacccc 12420103  T

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Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 44766276 - 44766332
Alignment:
Q  26 aaaaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  44766276 aaaagataaataaaagagtatttattgagattttgtgaaagaaagtgtgttatgata 44766332  T

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Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 14198456 - 14198404
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  14198456 aaaataaataaaagagtctttattgagattttgtgaa--agagtgtgttatgata 14198404  T

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Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 31170164 - 31170101
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaata 253  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  31170164 aagtcttttaaaatcctcaagactttttaaaacaaaaattgtcctttaaaatcctaatccaata 31170101  T

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Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 21136658 - 21136588
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||| ||||||||    
T  21136658 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaaaacaccccc 21136588  T

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Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 305164 - 305097
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||    
T  305164 aagtcttttaaaatcctcaagatttttttaaacaaaaattgtc-tttaaaatcctaatccaatacaccc 305097  T

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Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 9120720 - 9120788
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       ||||||||||| |||||||||||||||||| |||||||||    
T  9120720 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatctaatacaccc 9120788  T

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Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 44766486 - 44766554
Alignment:
Q  193 tcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    |||||||||||||||||||       |||||||||||||| |||||||||||||| |||||||||||||    
T  44766486 tcttttaaaatcctcaagacttttttaaacaaaaattgtcttttaaaatcctaattcaatacaccccct 44766554  T

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Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 1790018 - 1790081
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaata 253  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||    
T  1790018 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatctaata 1790081  T

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Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 26601106 - 26601065
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagaga 69  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  26601106 aaaataaataaaatagtctttattgagattttgtgaaagaga 26601065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 43848206 - 43848274
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||||||||| |||||||       |||||||||||||| ||||||||| |||||||||||||||    
T  43848206 aagtcttttaaaattctcaagatttttttaaacaaaaattgtcttttaaaatcataatccaatacaccc 43848274  T

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Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 14198252 - 14198189
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaata 253  Q
    |||||||||||||||||||| |       ||||||||||||| |||||||||||||||||||||    
T  14198252 aagtcttttaaaatcctcaaaacttttttaaacaaaaattgttctttaaaatcctaatccaata 14198189  T

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Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 16270378 - 16270449
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaa-ttgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||| ||||| || ||||||||||||||||||||||||||||||    
T  16270378 aagtcttttaaaatcctcaagacttttttaaaaaaaaaattatcctttaaaatcctaatccaatacaccccc 16270449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 16270110 - 16270143
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  16270110 aaaataaataaaagagtctttattgagattttgt 16270143  T

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Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 35317447 - 35317480
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  35317447 aaaataaataaaagagtctttattgagattttgt 35317480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 1188714 - 1188674
Alignment:
Q  221 acaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  1188714 acaaaaattttcttttaaaatcctaatccaatacaccccct 1188674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 10658489 - 10658529
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  10658489 aaaatagtcttttaaaatcctaatccaatacaccccctaaa 10658529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 11997234 - 11997194
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  11997234 aaacaaaaattatcctttaaaatcataatccaatacacccc 11997194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 33136656 - 33136692
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||| |||||||||||||||||||||||||||    
T  33136656 aaaattgtcttttaaaatcctaatccaatacaccccc 33136692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 260
Target Start/End: Complemental strand, 20156382 - 20156343
Alignment:
Q  221 acaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  20156382 acaaaaatagtcttttaaaatcctaatccaatacaccccc 20156343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 21988348 - 21988391
Alignment:
Q  221 acaaaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||||||||||||||||||||| |||  |||||||||||||||    
T  21988348 acaaaaattgtcctttaaaatccaaattgaatacaccccctaaa 21988391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 255
Target Start/End: Complemental strand, 10125030 - 10124997
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaataca 255  Q
    ||||||||||||||||||||||||||| ||||||    
T  10125030 caaaaattgtcctttaaaatcctaatctaataca 10124997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 44766215 - 44766248
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||| ||||||||||||||||||||||||    
T  44766215 aaaataaattaaagagtctttattgagattttgt 44766248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 214660 - 214624
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  214660 aaaatagtcttttaaaatcctaatccaatacaccccc 214624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 379969 - 380005
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  379969 aaaatagtcttttaaaatcctaatccaatacaccccc 380005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 18178331 - 18178367
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  18178331 aaaatagtcttttaaaatcctaatccaatacaccccc 18178367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 25289214 - 25289250
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  25289214 aaaatagtcttttaaaatcctaatccaatacaccccc 25289250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 26789844 - 26789880
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  26789844 aaaatagtcttttaaaatcctaatccaatacaccccc 26789880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 730507 - 730600
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |||||||||    
T  730507 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattattttttaaaattcataaaatctgttg 730600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 955910 - 956004
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| |||||||||||| |||||||||    
T  955910 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctgttg 956004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 6304048 - 6303956
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||    
T  6304048 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata--ttttttcaattattttttaaaattcataaaatctgttg 6303956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 19451545 - 19451491
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19451545 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 19451491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 33085609 - 33085555
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33085609 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 33085555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 21222584 - 21222677
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |       |||||||||||||||||||||| ||| |||||    
T  21222584 aaaataaataaaagagtctttattgagattttgcgaaagagagtgtgttatgat-atttttttcaattattttttaaaattcataaaatatgttg 21222677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 45759732 - 45759639
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  45759732 aaaataaataaaagagtctttattgagattttgtgaaagagaatgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 45759639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 29556398 - 29556489
Alignment:
Q  29 aaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgtt 121  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| ||||||||    
T  29556398 aaataaataaaagagtcttttttgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgtt 29556489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 47654111 - 47654057
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47654111 aaaataaataaaagagtatttattgagattttgtgaaagagagtgtgttatgata 47654057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 6303844 - 6303774
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  6303844 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 6303774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 28824157 - 28824063
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||         |||||||| |||||||||||| |||||||||    
T  28824157 aaaataaataaaagagtttttattgagattttgtgaaagagaatgtgttatgatattttttttaaattatttcttaaaattcataaaatctgttg 28824063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 35280295 - 35280365
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  35280295 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 35280365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 50192371 - 50192323
Alignment:
Q  33 aaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50192371 aaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 50192323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 47781088 - 47781142
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  47781088 aaaataaataaaaaagtatttattgagattttgtgaaagagagtgtgttatgata 47781142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 49198035 - 49197981
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  49198035 aaaataaataaaagagtcttttttgagattttgtgaaatagagtgtgttatgata 49197981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 35280107 - 35280188
Alignment:
Q  36 taaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatct 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |||||    
T  35280107 taaaagagtctttatagagattttgtgaaagagagtgtgttatgat-atttttttcaattattttttaaaattcataaaatct 35280188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 35679035 - 35678940
Alignment:
Q  25 taaaaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||         ||||||||||||||||| ||| |||||||||    
T  35679035 taaaaaataaataaaagagtct--attgaaattttgtgaaagagagtgtgttatgatatttttttttaattattttttaaaatttataaaatctgttg 35678940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 45759527 - 45759457
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    |||||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||||||||    
T  45759527 aagtcttttaaaatcctcaaaactttttcaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 45759457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 50192140 - 50192072
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||| ||||       ||||||||||||||||||||||||||||||||||||||||    
T  50192140 aagtcttttaaaatccttaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 50192072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 48524925 - 48524979
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  48524925 aaaataaataagagagtcttttttgagattttgtgaaagagaatgtgttatgata 48524979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 49197830 - 49197759
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    |||||||||||||||||||| |       |||||||||||||| ||||||||||||||||||||||||||||    
T  49197830 aagtcttttaaaatcctcaaaacttttttaaacaaaaattgtcttttaaaatcctaatccaatacaccccct 49197759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 19451350 - 19451280
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||| |||||||||||| |||||||||||||||||    
T  19451350 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcataatccaatacaccccc 19451280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 45536422 - 45536515
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||  ||||||| |||||||||||||||||||||||||||||||||        || |||||| |||||||||||| |||||||||    
T  45536422 aaaataaataaac-agtcttttttgagattttgtgaaagagagtgtgttatgatattttttttcagttatttcttaaaattcataaaatctgttg 45536515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 956097 - 956165
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       |||||||||||||| |||||||| ||||||||||||||||    
T  956097 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcttttaaaattctaatccaatacaccc 956165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 31572119 - 31572035
Alignment:
Q  29 aaataaataaaagagtctttatt-gagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcata 112  Q
    ||||||||| |||||| |||||| ||||||||||||||||| |||||||||||||        ||||||||||||||||||||||    
T  31572119 aaataaatataagagtttttatttgagattttgtgaaagagggtgtgttatgatattttttttcaattattttttaaaattcata 31572035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 28823951 - 28823880
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||||||||||||||||||||       |||||||||||||||||| ||||  ||||||||||||||||||    
T  28823951 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttgaaatattaatccaatacaccccct 28823880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 730712 - 730782
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||| ||||||       ||||||||||| ||||||||||||||||| ||||||||||||    
T  730712 aagtcttttaaaatcatcaagatttttttaaacaaaaattatcctttaaaatcctaattcaatacaccccc 730782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 35678801 - 35678756
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  35678801 aaacaaaaattatccgttaaaatcctaatccaatacaccccctaaa 35678756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 47781283 - 47781357
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaac-aaaaattgtcctttaaaatcctaatccaatacaccccctaa 263  Q
    ||||||||||||||||||||||       |||| ||||||| || ||||||||||||||||||||||||||||||    
T  47781283 aagtcttttaaaatcctcaagacttttttaaacaaaaaattatcttttaaaatcctaatccaatacaccccctaa 47781357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 49418401 - 49418493
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||| |||| |||||  ||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  49418401 aaaataaataaa-gagtttttatcaagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 49418493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 29209503 - 29209543
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  29209503 aaacaaaaattgtcctttaaaatcctaatctaatacacccc 29209543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 33026176 - 33026212
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaataca 255  Q
    |||||||||||||||||||||||||||||||||||||    
T  33026176 aaacaaaaattgtcctttaaaatcctaatccaataca 33026212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 48525113 - 48525178
Alignment:
Q  193 tcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||        ||||||||||| ||||||||||||||||||||||||||||    
T  48525113 tcttttaaaatcctcaagtcatttttaaacaaaaattatcctttaaaatcctaatccaatacaccc 48525178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 19451608 - 19451575
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  19451608 aaaataaataaaagagtctttattgagattttgt 19451575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 37014389 - 37014327
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaat 252  Q
    ||||||||||||||||| ||||       ||||||||||||||||| ||||||||||||||||    
T  37014389 aagtcttttaaaatccttaagacttttttaaacaaaaattgtccttcaaaatcctaatccaat 37014327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 37014541 - 37014484
Alignment:
Q  27 aaaaataaataaaagagtctttattgag-attttgtgaaagagagtgtgttatgataa 83  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||||||||| ||||    
T  37014541 aaaaataaataaaagagtctgtattgagaatattgtaaaagagagtgtgttataataa 37014484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 45759795 - 45759762
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  45759795 aaaataaataaaagagtctttattgagattttgt 45759762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 47654174 - 47654141
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  47654174 aaaataaataaaagagtctttattgagattttgt 47654141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 47784837 - 47784878
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  47784837 aaacaaaaattgtcctttaaaatcctggtccaatacaccccc 47784878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 49198098 - 49198065
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  49198098 aaaataaataaaagagtctttattgagattttgt 49198065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 260
Target Start/End: Complemental strand, 1923134 - 1923095
Alignment:
Q  221 acaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  1923134 acaaaaatagtcttttaaaatcctaatccaatacaccccc 1923095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 29395573 - 29395530
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaaaatc 267  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||    
T  29395573 aaaatagtcttttaaaatcctaatccaatacacccccttaaatc 29395530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 31571884 - 31571845
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  31571884 aaacaaaaattgtcctttaaaattctaatctaatacaccc 31571845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 49232043 - 49232078
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    ||||||||| ||||||||||||||||||||||||||    
T  49232043 aaaattgtcttttaaaatcctaatccaatacacccc 49232078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 49418596 - 49418664
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       ||||||||||| ||||||||||| |||||| ||| |||||    
T  49418596 aagtcttttaaaatcctcaagatttttttaaacaaaaattatcctttaaaattctaatctaatgcaccc 49418664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 29556601 - 29556639
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  29556601 aaacaaaaattgttctttaaaatcctaattcaatacacc 29556639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 253
Target Start/End: Complemental strand, 47653877 - 47653843
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaata 253  Q
    ||||||||||||| |||||||||||||||||||||    
T  47653877 aaacaaaaattgttctttaaaatcctaatccaata 47653843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 15835375 - 15835412
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  15835375 aaaatagtcttttaaaatcctaatccaatacaccccct 15835412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 46329027 - 46329064
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  46329027 aaaatagtcttttaaaatcctaatccaatacaccccct 46329064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 6313635 - 6313671
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  6313635 aaaatagtcttttaaaatcctaatccaatacaccccc 6313671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 25613151 - 25613187
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  25613151 aaaatagtcttttaaaatcctaatccaatacaccccc 25613187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 28386593 - 28386557
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  28386593 aaaatagtcttttaaaatcctaatccaatacaccccc 28386557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 6197214 - 6197121
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  6197214 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 6197121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 2238791 - 2238845
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2238791 aaaataaataaaagagtctttattgaaattttgtgaaagagagtgtgttatgata 2238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 29077080 - 29077134
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29077080 aaaataaataaaatagtctttattgagattttgtgaaagagagtgtgttatgata 29077134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 2300218 - 2300148
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  2300218 aagtcttttaaaatcctcaagatttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 2300148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 6197009 - 6196939
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  6197009 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 6196939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 1392010 - 1392064
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  1392010 aaaataaataaaaaaatctttattgagattttgtgaaagagagtgtgttatgata 1392064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 29112052 - 29112106
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  29112052 aaaataaataaaatagtctttattgagattttgtgaaagagagtgagttatgata 29112106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 2300424 - 2300369
Alignment:
Q  28 aaaataaataaaagagtcttt-attgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2300424 aaaatcaataaaagagtcttttattgagattttgtgaaagagagtgtgttatgata 2300369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 10344966 - 10344924
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10344966 aaacaaaaattgtcctttaaaatcctaatccaatacaccccct 10344924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 1392206 - 1392274
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       |||||||||| ||| |||||||||||||||||||||||||    
T  1392206 aagtcttttaaaatcctcaagacttttttaaacaaaaatcgtcatttaaaatcctaatccaatacaccc 1392274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 28002995 - 28003042
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgt 75  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||    
T  28002995 aaaataaataaaagagtctttattgatattttgtgaaagacagtgtgt 28003042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 3608053 - 3608121
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||| ||||       ||||||||||| ||||||||||||||||| ||||||||||    
T  3608053 aagtcttttaaaatcctaaagacttttttaaacaaaaattatcctttaaaatcctaattcaatacaccc 3608121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 7052432 - 7052479
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccccctaaaat 266  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||    
T  7052432 aaacaaaaattgtcctttaaaatcctaattcaatacactcccttaaat 7052479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 23929371 - 23929409
Alignment:
Q  221 acaaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  23929371 acaaaaattgtcttttaaaatcctaatccaatacacccc 23929409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 6197277 - 6197244
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  6197277 aaaataaataaaagagtctttattgagattttgt 6197244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 29114867 - 29114903
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||| ||||||||||||||||||||||||||||    
T  29114867 caaaaattatcctttaaaatcctaatccaatacaccc 29114903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 5160985 - 5160950
Alignment:
Q  223 aaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||||||||||||||| |||||||||||||||    
T  5160985 aaaaattgtcctttaaaatcataatccaatacaccc 5160950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 2239017 - 2239055
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  2239017 aaacaaaagttgtcctttaaaatcgtaatccaatacacc 2239055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 263
Target Start/End: Complemental strand, 4199612 - 4199583
Alignment:
Q  234 tttaaaatcctaatccaatacaccccctaa 263  Q
    ||||||||||||||||||||||||||||||    
T  4199612 tttaaaatcctaatccaatacaccccctaa 4199583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 7498159 - 7498196
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  7498159 aaaatagtcttttaaaatcctaatccaatacaccccct 7498196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 29077017 - 29077050
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||| ||||||||||||||||    
T  29077017 aaaataaataaaagagtttttattgagattttgt 29077050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 29111989 - 29112022
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||| ||||||||||||||||    
T  29111989 aaaataaataaaagagtttttattgagattttgt 29112022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 30384207 - 30384171
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  30384207 aaaatagtcttttaaaatcctaatccaatacaccccc 30384171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 31068479 - 31068515
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  31068479 aaaatagtcttttaaaatcctaatccaatacaccccc 31068515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 31896696 - 31896732
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  31896696 aaaatagtcttttaaaatcctaatccaatacaccccc 31896732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 139632 - 139725
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  139632 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 139725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 33655856 - 33655762
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||        ||||||||| |||||||||||| |||||||||    
T  33655856 aaaataaataaaagagtctttattaagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctgttg 33655762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 21147555 - 21147646
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgt 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||    
T  21147555 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgt 21147646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 849705 - 849798
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  849705 aaaataaataaaagagtttttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 849798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 6461152 - 6461245
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |       |||||||||||||||||||||| |||||||||    
T  6461152 aaaataaataaaatagtctttattgagattttatgaaagagagtgtgttatgat-atttttttcaattattttttaaaattcataaaatctgttg 6461245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 7016540 - 7016447
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  7016540 aaaataaataaaagagtctttattgagattttgtgaaaaagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 7016447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 27458748 - 27458680
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  27458748 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 27458680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 849901 - 849972
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||||| ||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  849901 aagtcttataaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 849972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 260
Target Start/End: Original strand, 21147760 - 21147827
Alignment:
Q  193 tcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  21147760 tcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 21147827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 32157793 - 32157739
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  32157793 aaaataagtaaaagagtctttattgagattttgtgaaagaaagtgtgttatgata 32157739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 5272507 - 5272437
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    |||||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||||||||    
T  5272507 aagtcttttaaaatcctcaaaaaaaatttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 5272437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 43319492 - 43319439
Alignment:
Q  29 aaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  43319492 aaataaataaaatagtctttattgagattttgtgaaagagagtttgttatgata 43319439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 4772028 - 4771977
Alignment:
Q  31 ataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  4772028 ataaataaatgagtctttattgagattttgtgaaagatagtgtgttatgata 4771977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 33655650 - 33655579
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||| ||||    
T  33655650 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatctaatacactccct 33655579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 43319297 - 43319227
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       |||||||||||||| |||||||||||||||||||||| ||||    
T  43319297 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcttttaaaatcctaatccaatacatcccc 43319227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 5272714 - 5272619
Alignment:
Q  28 aaaataaataaaagagtctttattgaga--ttttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||||||| || |       |||||||||||||||||| ||| |||||||||    
T  5272714 aaaataaataaaagagtttttattgagagattttgtgaaagagagtgtgttataat-atttttttcaattattttttaaaatttataaaatctgttg 5272619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 4771836 - 4771768
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||||||||||||||| |       |||||||||||||||||||||||||||||| |||||||||    
T  4771836 aagtcttttaaaatcctcaaaacttttttaaacaaaaattgtcctttaaaatcctaatcaaatacaccc 4771768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 7016335 - 7016268
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    |||||||||||||||||||| |       |||||||||||||||||||||||||||||| ||||||||    
T  7016335 aagtcttttaaaatcctcaaaacttttttaaacaaaaattgtcctttaaaatcctaatcaaatacacc 7016268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 139857 - 139901
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccccctaa 263  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  139857 aaacaaaaattatcctttaaaatcataatccaatacaccccctaa 139901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 21147492 - 21147525
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  21147492 aaaataaataaaagagtctttattgagattttgt 21147525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 28593035 - 28592999
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||| |||||||||||||||||||||||||||    
T  28593035 aaaattgtcttttaaaatcctaatccaatacaccccc 28592999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 6461377 - 6461425
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaat---ccaatacaccccctaaa 264  Q
    ||||||||||| |||||||||||||||||   |||||||||||||||||    
T  6461377 aaacaaaaattatcctttaaaatcctaatccaccaatacaccccctaaa 6461425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 4239615 - 4239578
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  4239615 aaaatagtcttttaaaatcctaatccaatacaccccct 4239578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 13999249 - 13999213
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  13999249 aaaatagtcttttaaaatcctaatccaatacaccccc 13999213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 40012852 - 40012816
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  40012852 aaaatagtcttttaaaatcctaatccaatacaccccc 40012816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 25446495 - 25446588
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  25446495 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 25446588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 40536830 - 40536736
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |       ||||||||| |||||||||||| |||||||||    
T  40536830 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttataatcatttttttcaattatttcttaaaattcataaaatctgttg 40536736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 25331485 - 25331539
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25331485 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 25331539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 32952049 - 32952103
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32952049 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 32952103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 41880849 - 41880795
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41880849 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 41880795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 7249775 - 7249679
Alignment:
Q  24 gtaaaaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |       ||||||||| ||||||||||||||||||||||    
T  7249775 gtaaaaaataaataaaa-agtctttattga-attttgtgaaagagagtgtgttatgatcatttttttcaattatttcttaaaattcatagaatctgttg 7249679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 34228424 - 34228331
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  34228424 aaaataaataaaagagtctttattaagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 34228331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 37046356 - 37046303
Alignment:
Q  29 aaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37046356 aaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 37046303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 49469621 - 49469711
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatct 118  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||        ||||||||| |||||||||||| |||||    
T  49469621 aaaataaatataagagtctttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatct 49469711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 7007691 - 7007745
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7007691 aaaataaataaaaaagtctttattgagattttgtgaaagagagtgtgttatgata 7007745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 22202467 - 22202521
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22202467 aaaataaataaaagaatctttattgagattttgtgaaagagagtgtgttatgata 22202521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 24130726 - 24130672
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24130726 aaaataaataaaagagtctttattgagattttgtgaaagaaagtgtgttatgata 24130672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 28541898 - 28541952
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28541898 aaaataaataaaagagtatttattgagattttgtgaaagagagtgtgttatgata 28541952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 22202672 - 22202742
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  22202672 aagtcttttaaaatcctcaagacttctttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 22202742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 24130530 - 24130460
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  24130530 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 24130460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 30009566 - 30009513
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 81  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30009566 aaaataaataaaagagtctttattgagattttgtaaaagagagtgtgttatgat 30009513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 25446680 - 25446749
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  25446680 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacacccc 25446749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 55975165 - 55975233
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  55975165 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 55975233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 53276181 - 53276235
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  53276181 aaaataaataaaagagtctttgttgagattttgtgaaagatagtgtgttatgata 53276235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 1045118 - 1045174
Alignment:
Q  25 taaaaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 81  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  1045118 taaaagataaataaaagggtctttattgagattttgtgaaagaaagtgtgttatgat 1045174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 3436930 - 3436978
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgtt 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3436930 aaaataaataaaagagtctttattgagattatgtgaaagagagtgtgtt 3436978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 25331692 - 25331757
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaataca 255  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  25331692 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaataca 25331757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 42787026 - 42787078
Alignment:
Q  29 aaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 81  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  42787026 aaataaataaaagtgtctttattgagattttgtgaaagagaatgtgttatgat 42787078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 34228229 - 34228158
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||||||||||||||||||||       ||||||||||| |||||||||||| ||||||||||||||||||    
T  34228229 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcataatccaatacaccccct 34228158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 41880661 - 41880594
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    ||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||    
T  41880661 aagtcttttaaaatcctcatgacttttttaaacaaaaattgtcctttaaaatcctaatccaatacacc 41880594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 7246960 - 7246907
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 81  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  7246960 aaaataaataaacgagtctttattgagattttgtgaaagagaatgtgtaatgat 7246907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 31314492 - 31314422
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    |||||||||||||||||||| |       |||||||||||||||||||||||| |||||||||||||||||    
T  31314492 aagtcttttaaaatcctcaatacttttttaaacaaaaattgtcctttaaaatcttaatccaatacaccccc 31314422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 27453977 - 27453929
Alignment:
Q  33 aaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 81  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||    
T  27453977 aaataaaaaaatctttattgagattttgtgaaagagagtgtgttatgat 27453929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 7007896 - 7007964
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       ||||||||||| || |||||||||||||||||||||||||    
T  7007896 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcttttaaaatcctaatccaatacaccc 7007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 7246615 - 7246547
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       ||||||||||| |||||||||||| |||||||||||||||    
T  7246615 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcataatccaatacaccc 7246547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 23465275 - 23465322
Alignment:
Q  26 aaaaaataaataaaagagtctttattgagattttgtgaaagagagtgt 73  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23465275 aaaaaataaataaaagagtatttattgaaattttgtgaaagagagtgt 23465322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 31314668 - 31314585
Alignment:
Q  38 aaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||| ||||||||||||||||||||||||||||||||| || |       ||||||||| |||||||||||| |||||||||    
T  31314668 aaagagtttttattgagattttgtgaaagagagtgtgttatcat-atttttttcaattatttcttaaaattcataaaatctgttg 31314585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 37046132 - 37046093
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37046132 aaacaaaaattgtcctttaaaatcctaatccaatacaccc 37046093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 41321119 - 41321194
Alignment:
Q  46 tttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  41321119 tttattgagattttgtgaaagagagtgtgttatgat-agttttttcaattatttcttaaaattcataaaatctgttg 41321194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 49469818 - 49469886
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||| ||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||    
T  49469818 aagtcctttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaattctaatccaatacaccc 49469886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 3437137 - 3437204
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    ||||||||||||||||||||||       |||||||||||||| |||||||||||||| |||||||||    
T  3437137 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcttttaaaatcctaattcaatacacc 3437204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 46635304 - 46635241
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaata 253  Q
    |||||||||||||||||||| |       |||||||||||||||||||||||||||||||||||    
T  46635304 aagtcttttaaaatcctcaaaacttttttaaacaaaaattgtcctttaaaatcctaatccaata 46635241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 55974971 - 55975059
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatct 118  Q
    |||||||||| ||||||||||||||||||||| ||||  ||||||||||||||||        ||||||||| |||||||||||| |||||    
T  55974971 aaaataaatataagagtctttattgagattttatgaa--agagtgtgttatgatattttttttcaattatttcttaaaattcataaaatct 55975059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 264
Target Start/End: Original strand, 8712364 - 8712438
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||||||||||||| ||||||       || ||||||||||||||||||||| |||||||||||| ||||||||    
T  8712364 aagtcttttaaaatcttcaagacttttttaagcaaaaattgtcctttaaaatcataatccaatacagcccctaaa 8712438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 32952244 - 32952314
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||| ||||||||||| || |||||||||||||||    
T  32952244 aagtcttttaaaatcctcaagacttatttaaacaaaaattatcctttaaaattcttatccaatacaccccc 32952314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 1113545 - 1113593
Alignment:
Q  34 aataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  1113545 aataaaagagtctttttttagattttgtaaaagagagtgtgttatgata 1113593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 40536634 - 40536557
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc-cctaaaat 266  Q
    |||||||||||||||| |||||       ||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  40536634 aagtcttttaaaatccccaagacttttttaaacaaaaattatcctttaaaatcataatccaatacaccctcctaaaat 40536557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 42787224 - 42787289
Alignment:
Q  193 tcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||||||| ||||||       ||||||||||||||||||||||| ||||||||||||||||    
T  42787224 tcttttaaaatcttcaagacttttttaaacaaaaattgtcctttaaaattctaatccaatacaccc 42787289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 263
Target Start/End: Original strand, 5105001 - 5105040
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaa 263  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  5105001 aaaattgtcttttaaaatcctaatccaatacaccccctaa 5105040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 12913899 - 12913938
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  12913899 caaaaattgtcctttaaaatcttaatccaatacaccccct 12913938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 16020686 - 16020725
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  16020686 aaacaaaaattgtcctttaaaattctaatccaatacaccc 16020725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 28542122 - 28542161
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  28542122 aaacaaaaattatcctttaaaatcctaatccaatacaccc 28542161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 257
Target Start/End: Original strand, 26340620 - 26340654
Alignment:
Q  223 aaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    |||||||||||||||||||||||||||||||||||    
T  26340620 aaaaattgtcctttaaaatcctaatccaatacacc 26340654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 28099722 - 28099680
Alignment:
Q  221 acaaaaattgtcctttaaaatcctaatccaatacaccccctaa 263  Q
    |||||||||||| |||||||||||||| |||||||||||||||    
T  28099722 acaaaaattgtcttttaaaatcctaattcaatacaccccctaa 28099680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 44770524 - 44770482
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  44770524 aaacaaaaattgtcctttaaaatcataattcaatacaccccct 44770482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 45341625 - 45341667
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  45341625 aaacaaaaattgtcctttaaaattctaatgcaatacaccccct 45341667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 30009329 - 30009296
Alignment:
Q  223 aaaaattgtcctttaaaatcctaatccaatacac 256  Q
    ||||||||||||||||||||||||||||||||||    
T  30009329 aaaaattgtcctttaaaatcctaatccaatacac 30009296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 23465533 - 23465573
Alignment:
Q  219 aaacaaaaattgtccttt-aaaatcctaatccaatacaccc 258  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  23465533 aaacaaaaattgtcctttaaaaatcctaatccaatacaccc 23465573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 47599356 - 47599417
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaa 251  Q
    ||||||||||||||||| ||||       || ||||||||||||||||||||||||||||||    
T  47599356 aagtcttttaaaatccttaagacttttttaagcaaaaattgtcctttaaaatcctaatccaa 47599417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 257
Target Start/End: Original strand, 28371466 - 28371501
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    |||||||||||||||||||||||||| |||||||||    
T  28371466 caaaaattgtcctttaaaatcctaattcaatacacc 28371501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 41321297 - 41321365
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||| ||||       ||||||||||  || |||||||||||||||||||||||||    
T  41321297 aagtcttttaaaatccttaagacttttttaaacaaaaatcatcttttaaaatcctaatccaatacaccc 41321365  T

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Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 16020476 - 16020526
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttat 78  Q
    ||||||||||||  | | |||||||||||||||||||| ||||||||||||    
T  16020476 aaaataaataaataattttttattgagattttgtgaaatagagtgtgttat 16020526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 39479192 - 39479133
Alignment:
Q  193 tcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaat 252  Q
    |||||||||||||||||||       ||||||||||| ||||||||||| ||||||||||    
T  39479192 tcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaattctaatccaat 39479133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 42722006 - 42722044
Alignment:
Q  223 aaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  42722006 aaaaaatgtcctttaaaatcttaatccaatacaccccct 42722044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 22202404 - 22202437
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||| ||||||||||||||||||||||||    
T  22202404 aaaataaatcaaagagtctttattgagattttgt 22202437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 32683170 - 32683133
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  32683170 aaaatagtcttttaaaatcctaatccaatacaccccct 32683133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 36727616 - 36727575
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaatacaccccctaa 263  Q
    |||||||| |||| |||||| |||||||||||||||||||||    
T  36727616 caaaaattttcctctaaaatactaatccaatacaccccctaa 36727575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 5442450 - 5442486
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  5442450 aaaatagtcttttaaaatcctaatccaatacaccccc 5442486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 7249613 - 7249548
Alignment:
Q  187 tgcaagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaat 252  Q
    ||||||||||||||||| || ||||       ||||||||||| ||| ||||||||||||||||||    
T  7249613 tgcaagtcttttaaaatactaaagatttttttaaacaaaaattatccattaaaatcctaatccaat 7249548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 260
Target Start/End: Original strand, 16019911 - 16019943
Alignment:
Q  228 ttgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| |||||||||||||||||||||||||||    
T  16019911 ttgtcttttaaaatcctaatccaatacaccccc 16019943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 27769123 - 27769159
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  27769123 aaaatagtcttttaaaatcctaatccaatacaccccc 27769159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 37369467 - 37369431
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||  |||||||||||||||||||||||||||    
T  37369467 aaaattgttttttaaaatcctaatccaatacaccccc 37369431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 48262134 - 48262170
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  48262134 aaaatagtcttttaaaatcctaatccaatacaccccc 48262170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 56444415 - 56444379
Alignment:
Q  223 aaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  56444415 aaaaattgtcctttaaaatgctaattcaatacacccc 56444379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 16008363 - 16008270
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  16008363 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 16008270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 33807437 - 33807344
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  33807437 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat-attttgttcaattatttcttaaaattcataaaatctgttg 33807344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 51699322 - 51699229
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  51699322 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 51699229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 33996263 - 33996171
Alignment:
Q  29 aaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  33996263 aaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 33996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 3205780 - 3205726
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3205780 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 3205726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 3999403 - 3999349
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3999403 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 3999349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 20498630 - 20498684
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20498630 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 20498684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 29448709 - 29448616
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  29448709 aaaataaataaaagagtttttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 29448616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 44761892 - 44761799
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  44761892 aaaataaataaaagagtcttaattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 44761799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 19254318 - 19254372
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19254318 aaaataaataaaagagtctttgttgagattttgtgaaagagagtgtgttatgata 19254372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 53928913 - 53928859
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  53928913 aaaataaataaaagagtccttattgagattttgtgaaagagagtgtgttatgata 53928859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 995552 - 995482
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  995552 aagtcttttaaaatcctcaagatttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 995482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 3999217 - 3999147
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  3999217 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 3999147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 10139025 - 10138968
Alignment:
Q  24 gtaaaaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 81  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  10139025 gtaaaaaataaataaaatagtctttattgagattttgtgaaggagagtgtgttatgat 10138968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 263
Target Start/End: Complemental strand, 44761687 - 44761614
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccctaa 263  Q
    ||||||||||||||||||||||       ||||||||||| |||||||||||||||||||||||||||||||||    
T  44761687 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaatacaccccctaa 44761614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 6590119 - 6590187
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  6590119 aagtcttttaaaatcctcaagactttcttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 6590187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 25418985 - 25419053
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  25418985 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 25419053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 52080313 - 52080367
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  52080313 aaaataaataaaggagtctttattgaaattttgtgaaagagagtgtgttatgata 52080367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 263
Target Start/End: Complemental strand, 33996059 - 33995986
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccctaa 263  Q
    |||||||||||||| |||||||       |||||||||||||||||||||||| ||||||||||||||||||||    
T  33996059 aagtcttttaaaattctcaagacttttttaaacaaaaattgtcctttaaaatcttaatccaatacaccccctaa 33995986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 52114949 - 52115038
Alignment:
Q  33 aaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||| | | |||||||||||||||||||||||||||||||||||||        ||||||||| |||||||||||| |||||||||    
T  52114949 aaataaaaaaatatttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctgttg 52115038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 54625913 - 54626002
Alignment:
Q  33 aaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| |||||        ||||||||| |||||||||||| |||||||||    
T  54625913 aaataaaagagtatttattgtgattttgtgaaagagagtgtgttctgatattttttttcaattatttcttaaaattcataaaatctgttg 54626002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 10138793 - 10138725
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||| ||||       ||||||||||||||||||||||||||||||||||||||||    
T  10138793 aagtcttttaaaatccttaagaattttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 10138725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 19254513 - 19254581
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||| ||||||       ||||||||||||||||||||||||||||||||||||||||    
T  19254513 aagtcttttaaaatcttcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 19254581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 1439781 - 1439727
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  1439781 aaaataaataaaaaaatctttattgagattttgtgaaagagaatgtgttatgata 1439727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 20498835 - 20498898
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaata 253  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  20498835 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaata 20498898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 16008167 - 16008097
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||| |||||    
T  16008167 aagtcttttaaaatcctcaagacttttttaaacaaaaattgacctttaaaatcctaatccaatacgccccc 16008097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 54626114 - 54626179
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaataca 255  Q
    ||||||||||||||||||||||       ||||||||||| |||||||||||||||||||||||||    
T  54626114 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaataca 54626179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 33807229 - 33807165
Alignment:
Q  193 tcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    |||||||||||||||||||       ||| |||||||||||||||||||||||||||||||||||    
T  33807229 tcttttaaaatcctcaagacttttttaaataaaaattgtcctttaaaatcctaatccaatacacc 33807165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 35338338 - 35338377
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35338338 aaacaaaaattgtcctttaaaatcctaatccaatacaccc 35338377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 6589925 - 6589967
Alignment:
Q  39 aagagtctttattgagattttgtgaaagagagtgtgttatgat 81  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  6589925 aagagtctttattgagattttgtgaaagagaatgtgttatgat 6589967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 53928688 - 53928642
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccccctaaaa 265  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  53928688 aaacaaaaattatcctttaaaattctaatccaatacaccccctaaaa 53928642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 995754 - 995710
Alignment:
Q  29 aaataaataaaagagtctttattgagattttgtgaaagagagtgt 73  Q
    |||||||||||||||||||||||||| |||| |||||||||||||    
T  995754 aaataaataaaagagtctttattgagtttttatgaaagagagtgt 995710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 1439582 - 1439521
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaa 251  Q
    ||||||||||||||||| ||||       |||||||||||||||||||||||||||||||||    
T  1439582 aagtcttttaaaatccttaagatttttttaaacaaaaattgtcctttaaaatcctaatccaa 1439521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 12108133 - 12108169
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||||||||||||||||||||||||||||||||    
T  12108133 caaaaattgtcctttaaaatcctaatccaatacaccc 12108169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 29448505 - 29448436
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    |||||||||||||| |||||||       |||||||||||||  ||||||||||||||||||||||||||    
T  29448505 aagtcttttaaaattctcaagacttttttaaacaaaaattgttttttaaaatcctaatccaatacacccc 29448436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 25418803 - 25418838
Alignment:
Q  47 ttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||||||||||||||||||||||    
T  25418803 ttattgagattttgtgaaagagagtgtgttatgata 25418838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 50899289 - 50899247
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  50899289 caaaaattgtcctttgaaatcctaatctaatacaccccctaaa 50899247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 51699117 - 51699054
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaata 253  Q
    ||||||||||||||||| ||||       |||||||||||||||||||||||| ||||||||||    
T  51699117 aagtcttttaaaatccttaagacttttttaaacaaaaattgtcctttaaaatcataatccaata 51699054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 52080613 - 52080651
Alignment:
Q  223 aaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  52080613 aaaaattgtcctttaaaatcataatccaatacaccccct 52080651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 3205843 - 3205810
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  3205843 aaaataaataaaagagtctttattgagattttgt 3205810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 3205906 - 3205873
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  3205906 aaaataaataaaagagtctttattgagattttgt 3205873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 3205969 - 3205936
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  3205969 aaaataaataaaagagtctttattgagattttgt 3205936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 15492441 - 15492404
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    |||||||||||||||||||| |||||||||||||||||    
T  15492441 caaaaattgtcctttaaaattctaatccaatacacccc 15492404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 40247358 - 40247424
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacac 256  Q
    |||||||||||||||||||| |       ||||||||||| ||||||||||||| ||||||||||||    
T  40247358 aagtcttttaaaatcctcaacacttttttaaacaaaaattatcctttaaaatccaaatccaatacac 40247424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 7319139 - 7319175
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||| |||||||||||||||||||||||||||    
T  7319139 aaaattgtcttttaaaatcctaatccaatacaccccc 7319175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 11432606 - 11432646
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  11432606 aaaatagtcttttaaaatcctaatccaatacaccccctaaa 11432646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 39842155 - 39842119
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||| ||||||||||||||||||||||||||||    
T  39842155 caaaaattatcctttaaaatcctaatccaatacaccc 39842119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 45135759 - 45135799
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  45135759 aaaattgtcttttaaaatcctaatcaaatacaccccctaaa 45135799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 52617122 - 52617086
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||| |||||||||||||||||||||||||||    
T  52617122 aaaattgtcttttaaaatcctaatccaatacaccccc 52617086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 265
Target Start/End: Original strand, 26108499 - 26108530
Alignment:
Q  234 tttaaaatcctaatccaatacaccccctaaaa 265  Q
    ||||||||||||||||||||||||||||||||    
T  26108499 tttaaaatcctaatccaatacaccccctaaaa 26108530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 40247142 - 40247193
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatg 79  Q
    ||||||||||||  | ||||||||||| |||||||||||||||| |||||||    
T  40247142 aaaataaataaagaaatctttattgagtttttgtgaaagagagtatgttatg 40247193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 46750027 - 46750066
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  46750027 caaaaattgtcttttaaaatcgtaatccaatacaccccct 46750066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 54629912 - 54629947
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    ||||||||| ||||||||||||||||||||||||||    
T  54629912 aaaattgtcttttaaaatcctaatccaatacacccc 54629947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 6131077 - 6131014
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaata 253  Q
    ||||||||||||||||| ||||       |||||||||||||||||||||||| ||||| ||||    
T  6131077 aagtcttttaaaatcctaaagacttttttaaacaaaaattgtcctttaaaatcttaatctaata 6131014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 6976258 - 6976295
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  6976258 caaaaattgtcctttaaaatcataatcaaatacacccc 6976295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 10728160 - 10728123
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  10728160 aaaatagtcttttaaaatcctaatccaatacaccccct 10728123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 16008426 - 16008393
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||| ||||||||||||||||||||||||    
T  16008426 aaaataaattaaagagtctttattgagattttgt 16008393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 17947279 - 17947316
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  17947279 aaaatagtcttttaaaatcctaatccaatacaccccct 17947316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 19254255 - 19254288
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||| ||||||||||||||||||||||||    
T  19254255 aaaataaattaaagagtctttattgagattttgt 19254288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 31645399 - 31645362
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  31645399 aaaattgtcttttaaaatcttaatccaatacaccccct 31645362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 33996327 - 33996294
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    |||||||||||||||| |||||||||||||||||    
T  33996327 aaaataaataaaagagactttattgagattttgt 33996294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Original strand, 38772557 - 38772586
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatc 248  Q
    ||||||||||||||||||||||||||||||    
T  38772557 aaacaaaaattgtcctttaaaatcctaatc 38772586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 53928976 - 53928943
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||| ||||||||||||||||||||||||    
T  53928976 aaaataaattaaagagtctttattgagattttgt 53928943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 24149872 - 24149832
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||| ||| ||||||||| |||||||||||||||||||||    
T  24149872 aaaatagtcttttaaaatcttaatccaatacaccccctaaa 24149832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 27239362 - 27239326
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  27239362 aaaatagtcttttaaaatcctaatccaatacaccccc 27239326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 36673295 - 36673259
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  36673295 aaaatagtcttttaaaatcctaatccaatacaccccc 36673259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 24805 - 24717
Alignment:
Q  30 aataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| |||||||||||| |||||    
T  24805 aataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatct 24717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 37322 - 37234
Alignment:
Q  30 aataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| |||||||||||| |||||    
T  37322 aataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatct 37234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 24601 - 24533
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||||||||||||||| |       ||||||||||||||||||||||| ||||||||||||||||    
T  24601 aagtcttttaaaatcctcaatacttttttaaacaaaaattgtcctttaaaattctaatccaatacaccc 24533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 44343273 - 44343219
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44343273 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 44343219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 47879533 - 47879587
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47879533 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 47879587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 47914611 - 47914665
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47914611 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 47914665  T

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Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 977194 - 977287
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |       ||||||||| |||||||||||| |||||||||    
T  977194 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttgtgat-atttttttcaattatttcttaaaattcataaaatctgttg 977287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 7113770 - 7113864
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||        ||||||||| |||||||||||| |||||||||    
T  7113770 aaaataaataaaagagtctttattgagattttgtgaaagagaatgtcttatgatattttttttcaattatttcttaaaattcataaaatctgttg 7113864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 43679612 - 43679708
Alignment:
Q  24 gtaaaaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |       ||||||||| ||||||||||||||||||||||    
T  43679612 gtaaaaaataaataaaa-agtctttattga-attttgtgaaagagagtgtgttatgatcatttttttcaattatttcttaaaattcatagaatctgttg 43679708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 8078482 - 8078574
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgtt 121  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| ||||||||    
T  8078482 aaaataaataaaagagtctctattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgtt 8078574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 43580890 - 43580797
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgtt 121  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||         |||||||| |||||||||||| ||||||||    
T  43580890 aaaataaataaaagagtctttattgaaattttgtgaaagagagtgtgttatgatatttttttcaaattatttcttaaaattcataaaatctgtt 43580797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 40996404 - 40996310
Alignment:
Q  26 aaaaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  40996404 aaaaaataaataaaa-agtctttattgagattttgtgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 40996310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 7718144 - 7718053
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctg 119  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||        ||||||||| |||||||||||| ||||||    
T  7718144 aaaataaataaaagagtctttattgagattttgtgaaaaaaagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctg 7718053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 12893985 - 12894056
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  12893985 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 12894056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 12893790 - 12893883
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||| || |       |||||||||||||||||||||| |||||||||    
T  12893790 aaaataaataaaagagcatttattgagattttgtgaaagagagtgtgttataat-atttttttcaattattttttaaaattcataaaatctgttg 12893883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 39219156 - 39219063
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |       ||||||||| |||||||||||| |||||||||    
T  39219156 aaaataaataaaagagtatttattgagattttatgaaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 39219063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 44343070 - 44343000
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  44343070 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 44343000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 34009396 - 34009450
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  34009396 aaaataaataaaagggtctttattgagattttgtgacagagagtgtgttatgata 34009450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 727817 - 727902
Alignment:
Q  35 ataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgtt 121  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |       ||||||||| |||||||||||| ||||||||    
T  727817 ataaaagagtctttattgagattttgtgtaagagagtgtgttatgat-atttttttcaattatttcttaaaattcataaaatctgtt 727902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 31401768 - 31401813
Alignment:
Q  33 aaataaaagagtctttattgagattttgtgaaagagagtgtgttat 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31401768 aaataaaagagtctttattgagattttgtgaaagagagtgtgttat 31401813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 263
Target Start/End: Complemental strand, 18916513 - 18916440
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccctaa 263  Q
    ||||||||||||||| ||||||       |||||||||||||||||||||||| ||||||||||||||||||||    
T  18916513 aagtcttttaaaatcttcaagacttttttaaacaaaaattgtcctttaaaatcataatccaatacaccccctaa 18916440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 34695664 - 34695712
Alignment:
Q  33 aaataaaagagtctttattgagattttgtgaaagagagtgtgttatgat 81  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34695664 aaataaaagagtttttattgagattttgtgaaagagagtgtgttatgat 34695712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 39218951 - 39218882
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||| |||||||||||    
T  39218951 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaattcaatacacccc 39218882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 43392297 - 43392245
Alignment:
Q  30 aataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  43392297 aataaataaaagagtcttttttgagattttgtaaaagagagtgtgttatgata 43392245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 34695896 - 34695964
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||| ||||       ||||||||||||||||||||||||||||||||||||||||    
T  34695896 aagtcttttaaaatccttaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 34695964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 7718869 - 7718802
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    ||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||||    
T  7718869 aagtcttttaaaatcctcaagacttttttaaacaaaaattgttctttaaaatcctaatccaatacacc 7718802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 7719074 - 7719020
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  7719074 aaaataaataaaagagtttttattgagattttgtgaaaaagagtgtattatgata 7719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 34009582 - 34009645
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaata 253  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  34009582 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaata 34009645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 8078687 - 8078757
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||| | ||||||||||||    
T  8078687 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctatttcaatacaccccc 8078757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 47879729 - 47879799
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||| || |||||||||||||||||||||||||||    
T  47879729 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcttttaaaatcctaatccaatacaccccc 47879799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 47914807 - 47914877
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       ||||||||||| || |||||||||||||||||||||||||||    
T  47914807 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcttttaaaatcctaatccaatacaccccc 47914877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 727727 - 727770
Alignment:
Q  35 ataaaagagtctttattgagattttgtgaaagagagtgtgttat 78  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  727727 ataaaagagtctttattgagattttgtgtaagagagtgtgttat 727770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 728014 - 728082
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       ||||||||||| ||||||||||||||||| ||||||||||    
T  728014 aagtcttttaaaatcctcaagacttttttaaacaaaaattctcctttaaaatcctaattcaatacaccc 728082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 31401961 - 31402029
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||| ||||| ||||||||||    
T  31401961 aagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaattctaattcaatacaccc 31402029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 43392094 - 43392026
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||||||||||||||| |       ||||||||||| ||||||||||||||||||||||||||||    
T  43392094 aagtcttttaaaatcctcaatacttttttaaacaaaaattatcctttaaaatcctaatccaatacaccc 43392026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 7717938 - 7717871
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacc 257  Q
    ||||||||||||||||||||||       ||||||||||||| |||||||||||||||| ||||||||    
T  7717938 aagtcttttaaaatcctcaagacttttttaaacaaaaattgttctttaaaatcctaatctaatacacc 7717871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 260
Target Start/End: Original strand, 12964060 - 12964098
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12964060 caaaaattgtcctttaaaatcctaatccaatacaccccc 12964098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 30441543 - 30441634
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    ||||||||||| ||| ||||||||||||||||||||||||||  |||||||||| |       ||||||||| |||||||||||| |||||||||    
T  30441543 aaaataaataatagattctttattgagattttgtgaaagaga--gtgttatgat-atttttttcaattatttcttaaaattcataaaatctgttg 30441634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 40996198 - 40996128
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||||||||||||||||||||       || |||||||| ||||||||||||||||| ||||||||||||    
T  40996198 aagtcttttaaaatcctcaagacttttttaatcaaaaattatcctttaaaatcctaatacaatacaccccc 40996128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 3796739 - 3796695
Alignment:
Q  222 caaaaattgtcctttaaaatcctaatccaatacaccccctaaaat 266  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||    
T  3796739 caaaaattgtcctttaaaatcctaattcaatacaccccgtaaaat 3796695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 9180375 - 9180419
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccccctaa 263  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||    
T  9180375 aaacaaaaattgtcctttaaaatcctaatccaattcacccgctaa 9180419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 977399 - 977467
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||| ||||||       |||||||||||||| ||||||||||||| |||||||||||    
T  977399 aagtcttttaaaatcttcaagacttttttaaacaaaaattgtcttttaaaatcctaaaccaatacaccc 977467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 29894016 - 29894063
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaaaatcatct 271  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||||||    
T  29894016 aaaatagtcttttaaaatcctaatccaatacaccccataaaatcatct 29894063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 43580655 - 43580613
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacacccccta 262  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  43580655 aaacaaaaattgtcctttaaaatcctaatcc-atacacccccta 43580613  T

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Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 9881436 - 9881390
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaaaatcatc 270  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||    
T  9881436 aaaattgtcttttaaaatcctaatccaatacacccccctaaatcatc 9881390  T

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Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 20274967 - 20274900
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||||||||||||||       ||||||||||||| ||||||||||||||| ||||||||||    
T  20274967 aagtcttttaaaatcctcaagacttttt-aaacaaaaattgtactttaaaatcctaattcaatacaccc 20274900  T

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Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 30441480 - 30441513
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  30441480 aaaataaataaaagagtctttattgagattttgt 30441513  T

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Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 40996462 - 40996429
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  40996462 aaaataaataaaagagtctttattgagattttgt 40996429  T

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Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 3635186 - 3635222
Alignment:
Q  223 aaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    |||||||||| ||||||||||||||||||||||||||    
T  3635186 aaaaattgtcttttaaaatcctaatccaatacacccc 3635222  T

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Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 21068417 - 21068457
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  21068417 aaaatagtcttttaaaatcctaatccaatacaccccctaaa 21068457  T

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Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 30441740 - 30441809
Alignment:
Q  190 aagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    |||| |||||||||||||||||       ||||||||||||| |||||||||| |||||||||| |||||    
T  30441740 aagtattttaaaatcctcaagacttttttaaacaaaaattgtactttaaaatcttaatccaataaacccc 30441809  T

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Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 7113986 - 7114025
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  7113986 aaacaaaaattgtcctttaaaatcataaaccaatacaccc 7114025  T

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Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 31639227 - 31639266
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  31639227 aaacaaaaattgtcctttaaaattataatccaatacaccc 31639266  T

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Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 835092 - 835129
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacac 256  Q
    ||||||||||| || |||||||||||||||||||||||    
T  835092 aaacaaaaattatcttttaaaatcctaatccaatacac 835129  T

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Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 1200272 - 1200309
Alignment:
Q  219 aaacaaaaattgtcctttaaaatcctaatccaatacac 256  Q
    ||||||||||| || |||||||||||||||||||||||    
T  1200272 aaacaaaaattatcttttaaaatcctaatccaatacac 1200309  T

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Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 3023983 - 3024020
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  3023983 aaaatagtcttttaaaatcctaatccaatacaccccct 3024020  T

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Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 39219219 - 39219186
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgt 61  Q
    ||||||||||||||||| ||||||||||||||||    
T  39219219 aaaataaataaaagagtttttattgagattttgt 39219186  T

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Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 23102350 - 23102386
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  23102350 aaaatagtcttttaaaatcctaatccaatacaccccc 23102386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 39785157 - 39785193
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccc 260  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  39785157 aaaatagtcttttaaaatcctaatccaatacaccccc 39785193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 43679774 - 43679839
Alignment:
Q  187 tgcaagtcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaat 252  Q
    ||||||||||||||||| || ||||       ||||||||||| ||| ||||||||||||||||||    
T  43679774 tgcaagtcttttaaaatactaaagatttttttaaacaaaaattatccattaaaatcctaatccaat 43679839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 46035484 - 46035444
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccctaaa 264  Q
    ||||| ||| ||||||||||||||||||||||| |||||||    
T  46035484 aaaatagtcttttaaaatcctaatccaatacacaccctaaa 46035444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 46121716 - 46121680
Alignment:
Q  220 aacaaaaattgtcctttaaaatcctaatccaatacac 256  Q
    |||||||||| || |||||||||||||||||||||||    
T  46121716 aacaaaaattatcttttaaaatcctaatccaatacac 46121680  T

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Target: scaffold0400 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 14855 - 14761
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||        ||| ||||| |||||||||||| |||||||||    
T  14855 aaaataaatagaagagtctttattgagattttgtgaaagagagtgtgttatgatattttttttcaactatttcttaaaattcataaaatctgttg 14761  T

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Target: scaffold0400; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 14646 - 14593
Alignment:
Q  193 tcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaa 246  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||    
T  14646 tcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaa 14593  T

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Target: scaffold0365 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 15498 - 15404
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgataannnnnnncaattattttttaaaattcatagaatctgttg 122  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||        ||| ||||| |||||||||||| |||||||||    
T  15498 aaaataaatagaagagtctttattgagattttgtgaaagagagtgtgttatgatattttttttcaactatttcttaaaattcataaaatctgttg 15404  T

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Target: scaffold0365; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 15289 - 15236
Alignment:
Q  193 tcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaa 246  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||    
T  15289 tcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaa 15236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 37930 - 37879
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatg 79  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  37930 aaaataaataaaaaaatctttattgagattttgtgaaagagagtgtgttatg 37879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 37731 - 37666
Alignment:
Q  193 tcttttaaaatcctcaagannnnnnnaaacaaaaattgtcctttaaaatcctaatccaatacaccc 258  Q
    ||||||||||| |||||||       ||||||||||| ||||||||||| ||||||||||||||||    
T  37731 tcttttaaaattctcaagacttttttaaacaaaaattatcctttaaaattctaatccaatacaccc 37666  T

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Target: scaffold0276 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 390 - 336
Alignment:
Q  28 aaaataaataaaagagtctttattgagattttgtgaaagagagtgtgttatgata 82  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  390 aaaataaataaaaaaatctttattgagattttgtgaaagagaatgtgttatgata 336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 10899 - 10863
Alignment:
Q  223 aaaaattgtcctttaaaatcctaatccaatacacccc 259  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10899 aaaaattgtcttttaaaatcctaatccaatacacccc 10863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 3609 - 3572
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  3609 aaaatagtcttttaaaatcctaatccaatacaccccct 3572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 12095 - 12132
Alignment:
Q  224 aaaattgtcctttaaaatcctaatccaatacaccccct 261  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  12095 aaaatagtcttttaaaatcctaatccaatacaccccct 12132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 263
Target Start/End: Complemental strand, 38775 - 38746
Alignment:
Q  234 tttaaaatcctaatccaatacaccccctaa 263  Q
    ||||||||||||||||||||||||||||||    
T  38775 tttaaaatcctaatccaatacaccccctaa 38746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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