View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17761_high_38 (Length: 346)

Name: NF17761_high_38
Description: NF17761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17761_high_38
NF17761_high_38
[»] chr2 (3 HSPs)
chr2 (181-330)||(38919249-38919398)
chr2 (18-126)||(38919453-38919561)
chr2 (281-330)||(11307971-11308020)
[»] chr6 (4 HSPs)
chr6 (238-315)||(24645528-24645605)
chr6 (243-315)||(4877990-4878061)
chr6 (245-281)||(5000557-5000593)
chr6 (237-281)||(17341615-17341659)
[»] chr8 (4 HSPs)
chr8 (238-315)||(36450689-36450766)
chr8 (285-330)||(13845277-13845322)
chr8 (243-308)||(39820482-39820547)
chr8 (243-275)||(34223021-34223053)
[»] chr7 (3 HSPs)
chr7 (239-314)||(7133208-7133284)
chr7 (243-292)||(40131939-40131989)
chr7 (243-308)||(23751953-23752018)
[»] chr5 (3 HSPs)
chr5 (266-314)||(43554574-43554622)
chr5 (245-308)||(7997108-7997172)
chr5 (243-314)||(32766872-32766943)
[»] chr3 (5 HSPs)
chr3 (243-314)||(4704220-4704292)
chr3 (241-292)||(27277778-27277829)
chr3 (242-314)||(21211341-21211414)
chr3 (241-281)||(17005546-17005586)
chr3 (245-308)||(24204983-24205047)
[»] chr1 (5 HSPs)
chr1 (243-314)||(9690213-9690285)
chr1 (243-292)||(34741916-34741965)
chr1 (243-279)||(32724044-32724080)
chr1 (242-314)||(42004881-42004953)
chr1 (243-291)||(48450550-48450598)
[»] chr4 (8 HSPs)
chr4 (263-321)||(10133749-10133808)
chr4 (243-308)||(18513175-18513241)
chr4 (241-330)||(31243474-31243564)
chr4 (243-315)||(34306744-34306816)
chr4 (243-314)||(16184879-16184950)
chr4 (243-314)||(24343560-24343632)
chr4 (246-313)||(46715416-46715484)
chr4 (243-314)||(53381530-53381602)
[»] scaffold0007 (1 HSPs)
scaffold0007 (245-325)||(225199-225279)
[»] scaffold0020 (1 HSPs)
scaffold0020 (241-292)||(135261-135313)


Alignment Details
Target: chr2 (Bit Score: 146; Significance: 7e-77; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 181 - 330
Target Start/End: Complemental strand, 38919398 - 38919249
Alignment:
Q  181 tcagaaggtttcacaatctttgccccaacagacaatgccttccaaaatcttccatcaggtaactatgaagcacaaacactcttcagattagacgtgtcct 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38919398 tcagaaggtttcacaatctttgccccaacagacaatgccttccaaaatcttccatcaggtaactatgaagcacaaacactcttcagattagacgtgtcct 38919299  T
Q  281 gtgtcggacacgcgtcagtatccgacaccgacactaacacgacacctatg 330  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38919298 gtgtcggacacgcatcagtatccgacaccgacactaacacgacacctatg 38919249  T

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Target: chr2; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 38919561 - 38919453
Alignment:
Q  18 cttcttaactccacaaatccaagcccaagccccagcaccagcaccctcaggcccaatcaacatcacaacaatctttgaaaaagctggtcaatacaacttc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38919561 cttcttaactccacaaatccaagcccaagccccagcaccagcaccctcaggcccaatcaacatcacaacaatctttgaaaaagctggtcaatacaacttc 38919462  T
Q  118 ctcattcgt 126  Q
    |||||||||    
T  38919461 ctcattcgt 38919453  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 11307971 - 11308020
Alignment:
Q  281 gtgtcggacacgcgtcagtatccgacaccgacactaacacgacacctatg 330  Q
    |||||||||||||||| || ||| ||||||||||  ||||||||||||||    
T  11307971 gtgtcggacacgcgtcggtgtccaacaccgacaccgacacgacacctatg 11308020  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 24645605 - 24645528
Alignment:
Q  238 ggtaactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacact 315  Q
    ||||||||||||||||| ||||||||| ||||||||||||| | |||||||||||| ||| || || ||||||||||||    
T  24645605 ggtaactatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtc-gtgtctgacaccgacact 24645528  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 4878061 - 4877990
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcgtcagtatccgacaccgacact 315  Q
    |||||||||||  |||||| || |||||| |||||||||||||||||| | ||| || |||||||||||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtcctgtgtcggacatgtgtc-gtgtccgacaccgacact 4877990  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 5000557 - 5000593
Alignment:
Q  245 atgaagcacaaacactcttcagattagacgtgtcctg 281  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  5000557 atgaagcacgaacactcttcggattagacgtgtcctg 5000593  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 17341615 - 17341659
Alignment:
Q  237 aggtaactatgaagcacaaacactcttcagattagacgtgtcctg 281  Q
    |||||| |||||||||||||||||| || |||||| |||||||||    
T  17341615 aggtaattatgaagcacaaacactcctcggattaggcgtgtcctg 17341659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 315
Target Start/End: Original strand, 36450689 - 36450766
Alignment:
Q  238 ggtaactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacact 315  Q
    |||| |||||||||||| |||||| || |||||| |||||||| |||||||||||||||| || ||||||||| |||||    
T  36450689 ggtagctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtc-gtgtccgacacctacact 36450766  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 13845322 - 13845277
Alignment:
Q  285 cggacacgcgtcagtatccgacaccgacactaacacgacacctatg 330  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||    
T  13845322 cggacacgcgtcagtgtccgacaccgacacagacacgacacctatg 13845277  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 39820547 - 39820482
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcgtcagtatccgacac 308  Q
    |||||||||||  |||||  || |||||| ||||||| |||||||||||||||| || ||||||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtcccgtgtcggacacgcgtcggtgtccgacac 39820482  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 34223053 - 34223021
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgt 275  Q
    ||||||||||||||||||||| |||||||||||    
T  34223053 ctatgaagcacaaacactctttagattagacgt 34223021  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 7133208 - 7133284
Alignment:
Q  239 gtaactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacac 314  Q
    |||||||||||||||  || ||| |||||||||  ||||||  |||||||||||||||| || ||||||||||||||    
T  7133208 gtaactatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgacac 7133284  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 40131939 - 40131989
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacg 292  Q
    |||||||||||| |||||| || |||||||||||| |||||||||||||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacacg 40131989  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 23752018 - 23751953
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcgtcagtatccgacac 308  Q
    |||||||||||| |||||  || |||||| ||||||| ||||| |||||||||| || ||||||||    
T  23752018 ctatgaagcacagacacttatcggattaggcgtgtcccgtgtctgacacgcgtcggtgtccgacac 23751953  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 43554622 - 43554574
Alignment:
Q  266 gattagacgtgtcctgtgtcggacacgcgtcagtatccgacaccgacac 314  Q
    |||||| ||||||| |||||||||||||||| || ||||||||||||||    
T  43554622 gattaggcgtgtcccgtgtcggacacgcgtcggtgtccgacaccgacac 43554574  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 7997108 - 7997172
Alignment:
Q  245 atgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacac 308  Q
    ||||||||||||||||  ||  |||||  |||||||| |||||||||||||||||| ||||||||    
T  7997108 atgaagcacaaacacttctcgaattaggtgtgtcctgatgtcggacacgcgtcagtgtccgacac 7997172  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 32766872 - 32766943
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacac 314  Q
    |||||||||||  |||||| ||||||||||||| |||| |||||||||||| ||| || | ||||||||||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtc-gttttcgacaccgacac 32766943  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 4704220 - 4704292
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacac 314  Q
    |||||| ||||||||| || |||||||||| ||||||| |||| |||||||||| ||| || |||||||||||    
T  4704220 ctatgacgcacaaacattcctcagattagatgtgtcctagtgttggacacgcgttagtgtcagacaccgacac 4704292  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 27277778 - 27277829
Alignment:
Q  241 aactatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacg 292  Q
    |||||||||||||| |||||| || |||||||| ||||| ||||||||||||    
T  27277778 aactatgaagcacatacactcctcggattagacatgtcccgtgtcggacacg 27277829  T

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Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 21211414 - 21211341
Alignment:
Q  242 actatgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacgcgtcagtatccgacaccgacac 314  Q
    |||||||||||||||||||| || ||||||  |||| || |||||||||||||||| || ||  ||||||||||    
T  21211414 actatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacgcgtcggtgtcgaacaccgacac 21211341  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 17005546 - 17005586
Alignment:
Q  241 aactatgaagcacaaacactcttcagattagacgtgtcctg 281  Q
    ||||||||||||||||||||| || ||||||| ||||||||    
T  17005546 aactatgaagcacaaacactcctcggattagaggtgtcctg 17005586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 24204983 - 24205047
Alignment:
Q  245 atgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacac 308  Q
    |||||||||  |||||| ||  ||||| ||||||||| |||||||||||||||||| ||||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacac 24205047  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 9690213 - 9690285
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacgcgtcagtatccgacaccgacac 314  Q
    |||||||||||||||||||| | |||||| ||||| || |||||||||||| ||||||  ||||| |||||||    
T  9690213 ctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtcagtggccgacgccgacac 9690285  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 34741965 - 34741916
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacg 292  Q
    |||||||||||  ||||||||| |||||| ||||||| ||||||||||||    
T  34741965 ctatgaagcacggacactcttcggattaggcgtgtcccgtgtcggacacg 34741916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 32724044 - 32724080
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgtcc 279  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  32724044 ctatgaagcacaaagactcttcagattaaacgtgtcc 32724080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 42004881 - 42004953
Alignment:
Q  242 actatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcgtcagtatccgacaccgacac 314  Q
    ||||||||||||  |||||||||  ||||| |||||   |||||||||| ||||| || ||||||||||||||    
T  42004881 actatgaagcacggacactcttcgaattaggcgtgtttagtgtcggacatgcgtcggtgtccgacaccgacac 42004953  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 291
Target Start/End: Original strand, 48450550 - 48450598
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacac 291  Q
    |||||||||||  |||||| || |||||||||||||||||||| |||||    
T  48450550 ctatgaagcacggacactcctcggattagacgtgtcctgtgtccgacac 48450598  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000008; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 10133808 - 10133749
Alignment:
Q  263 tcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacaccgacactaacacg 321  Q
    |||||||||  |||||||| |||||||||||||||||| || ||||||||||| ||||||    
T  10133808 tcagattaggtgtgtcctggtgtcggacacgcgtcagtgtctgacaccgacaccaacacg 10133749  T

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Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 18513175 - 18513241
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacac 308  Q
    |||||||||||  |||||| ||||||||| |||||||| ||||||||||| |||| || ||||||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacacacgtcggtgtccgacac 18513241  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 31243474 - 31243564
Alignment:
Q  241 aactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacactaacacgacacctatg 330  Q
    ||||||||| ||||||||||| ||| |||||  ||||||| |||||| |||||| || || ||||||||| ||||  ||| ||||||||||    
T  31243474 aactatgaaccacaaacactcctcatattaggtgtgtcctggtgtcgaacacgcatcggtgtccgacaccaacaccgacatgacacctatg 31243564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 34306744 - 34306816
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgtc-ctgtgtcggacacgcgtcagtatccgacaccgacact 315  Q
    ||||||||||| |||| || ||||||||| |||||| | |||||||||||| ||| || |||||||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtc-gtgtccgacaccgacact 34306816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 16184950 - 16184879
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacgcgtcagtatccgacaccgacac 314  Q
    ||||||||||||||||||| || |||||| ||||| || |||||||||| || || |||| ||||||||||||    
T  16184950 ctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggacaggcatc-gtatgcgacaccgacac 16184879  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 24343632 - 24343560
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacaccgacac 314  Q
    |||||||||||  |||||| ||||| ||| ||||||| | ||||||||||||||| || || |||||||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacac 24343560  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 46715416 - 46715484
Alignment:
Q  246 tgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacgcgtcagtatccgacaccgaca 313  Q
    |||||||| ||||||| || |||||||| ||| || |||||||||||||| |||| |||||||| ||||    
T  46715416 tgaagcacgaacactcctcggattagacatgtgccggtgtcggacacgcggcagtgtccgacacagaca 46715484  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 53381530 - 53381602
Alignment:
Q  243 ctatgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacaccgacac 314  Q
    |||||||||||  |||||| || ||||||  |||||| | ||||||| |||||||||| ||||||||||||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 325
Target Start/End: Original strand, 225199 - 225279
Alignment:
Q  245 atgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacaccgacactaacacgacac 325  Q
    |||||||||  |||||| ||  ||||| ||||||||| ||||| |||||||||||| ||||||| |||||| ||||||||||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacacgcgtcagtgtccgaca-cgacaccaacacgacac 225279  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 135261 - 135313
Alignment:
Q  241 aactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacg 292  Q
    ||||||||||||| ||||| | ||||||||| |||||||| ||||||||||||    
T  135261 aactatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacg 135313  T

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