View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17761_low_11 (Length: 511)

Name: NF17761_low_11
Description: NF17761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17761_low_11
NF17761_low_11
[»] chr4 (45 HSPs)
chr4 (311-498)||(43143584-43143771)
chr4 (311-498)||(42333776-42333963)
chr4 (314-498)||(30216742-30216926)
chr4 (314-498)||(3292896-3293080)
chr4 (314-498)||(6690235-6690419)
chr4 (314-496)||(50205079-50205261)
chr4 (311-498)||(25930688-25930875)
chr4 (314-480)||(10352902-10353068)
chr4 (314-498)||(28877250-28877434)
chr4 (311-486)||(20129290-20129465)
chr4 (314-498)||(48989311-48989495)
chr4 (348-498)||(44156668-44156818)
chr4 (311-486)||(26439291-26439466)
chr4 (311-486)||(34407296-34407471)
chr4 (331-498)||(36382346-36382512)
chr4 (309-486)||(47500751-47500928)
chr4 (311-495)||(29319708-29319892)
chr4 (311-486)||(13012168-13012343)
chr4 (355-498)||(35545977-35546120)
chr4 (314-498)||(29995983-29996167)
chr4 (311-486)||(43355884-43356059)
chr4 (341-498)||(17511233-17511391)
chr4 (314-485)||(26448036-26448206)
chr4 (314-495)||(40528996-40529179)
chr4 (309-480)||(30077649-30077819)
chr4 (386-498)||(6235575-6235687)
chr4 (320-457)||(30109945-30110084)
chr4 (311-457)||(48129950-48130087)
chr4 (366-498)||(1817752-1817884)
chr4 (409-486)||(13392893-13392970)
chr4 (409-486)||(13396032-13396109)
chr4 (49-215)||(17249204-17249370)
chr4 (314-431)||(45194159-45194276)
chr4 (314-416)||(27363344-27363446)
chr4 (311-372)||(7769308-7769369)
chr4 (314-368)||(49908782-49908836)
chr4 (356-424)||(6254569-6254637)
chr4 (314-368)||(5517494-5517548)
chr4 (314-367)||(6212029-6212082)
chr4 (314-367)||(17554979-17555032)
chr4 (314-379)||(13392989-13393054)
chr4 (314-379)||(13396128-13396193)
chr4 (315-416)||(20113775-20113876)
chr4 (315-368)||(50720476-50720529)
chr4 (309-367)||(12680193-12680251)
[»] chr5 (34 HSPs)
chr5 (19-225)||(41369689-41369896)
chr5 (314-498)||(31680350-31680534)
chr5 (314-498)||(12278860-12279044)
chr5 (314-498)||(17332551-17332735)
chr5 (314-498)||(31501716-31501900)
chr5 (311-498)||(37254621-37254808)
chr5 (345-498)||(33430335-33430488)
chr5 (314-495)||(10033910-10034091)
chr5 (314-498)||(13817960-13818144)
chr5 (311-480)||(36293639-36293808)
chr5 (331-495)||(39657509-39657673)
chr5 (311-486)||(39434676-39434851)
chr5 (309-486)||(26283330-26283507)
chr5 (349-486)||(16155015-16155152)
chr5 (333-497)||(1776377-1776541)
chr5 (361-495)||(16333879-16334013)
chr5 (310-480)||(3155649-3155819)
chr5 (333-498)||(19985941-19986106)
chr5 (314-498)||(36291354-36291538)
chr5 (350-498)||(43068896-43069044)
chr5 (344-457)||(28801300-28801415)
chr5 (43-250)||(41366334-41366541)
chr5 (46-180)||(31225166-31225300)
chr5 (45-181)||(41324312-41324448)
chr5 (46-180)||(31178468-31178602)
chr5 (46-180)||(31188513-31188647)
chr5 (49-183)||(41332221-41332355)
chr5 (45-181)||(41316243-41316379)
chr5 (314-416)||(202622-202724)
chr5 (51-183)||(41337150-41337282)
chr5 (43-166)||(41328225-41328348)
chr5 (314-361)||(26543902-26543949)
chr5 (45-126)||(41310558-41310639)
chr5 (140-180)||(41286280-41286320)
[»] chr3 (20 HSPs)
chr3 (311-498)||(11018212-11018399)
chr3 (314-498)||(45182964-45183148)
chr3 (311-498)||(6503569-6503756)
chr3 (314-498)||(6930894-6931078)
chr3 (314-498)||(33040936-33041120)
chr3 (311-498)||(27935158-27935345)
chr3 (331-498)||(34084122-34084289)
chr3 (311-486)||(6269438-6269613)
chr3 (314-480)||(19565519-19565685)
chr3 (331-486)||(19390146-19390301)
chr3 (311-486)||(22968456-22968631)
chr3 (311-486)||(39771770-39771945)
chr3 (314-480)||(45335858-45336023)
chr3 (314-498)||(35514249-35514429)
chr3 (344-498)||(40081741-40081893)
chr3 (353-457)||(5135291-5135397)
chr3 (314-368)||(6890981-6891035)
chr3 (314-431)||(5354692-5354809)
chr3 (315-388)||(22922141-22922214)
chr3 (450-498)||(22922214-22922262)
[»] chr8 (16 HSPs)
chr8 (311-498)||(34136825-34137012)
chr8 (311-498)||(4403988-4404175)
chr8 (314-498)||(23402091-23402275)
chr8 (329-498)||(16788025-16788194)
chr8 (314-498)||(29728386-29728570)
chr8 (345-498)||(3648794-3648947)
chr8 (331-495)||(15838286-15838449)
chr8 (314-498)||(2729196-2729380)
chr8 (318-498)||(36408538-36408718)
chr8 (353-485)||(9877242-9877374)
chr8 (311-486)||(39914495-39914669)
chr8 (347-457)||(3435285-3435397)
chr8 (363-498)||(42230971-42231104)
chr8 (318-416)||(10397122-10397220)
chr8 (354-424)||(40470567-40470637)
chr8 (406-465)||(376459-376519)
[»] chr2 (23 HSPs)
chr2 (314-498)||(45418566-45418750)
chr2 (314-497)||(8147334-8147518)
chr2 (314-498)||(44084603-44084787)
chr2 (314-495)||(8059336-8059517)
chr2 (310-495)||(42439965-42440150)
chr2 (314-497)||(770977-771165)
chr2 (334-486)||(41251646-41251798)
chr2 (311-495)||(35962695-35962879)
chr2 (349-498)||(12756837-12756986)
chr2 (331-498)||(31581622-31581789)
chr2 (309-486)||(17445053-17445228)
chr2 (311-495)||(32127144-32127328)
chr2 (311-486)||(6403816-6403991)
chr2 (334-495)||(16405603-16405764)
chr2 (311-495)||(18981597-18981780)
chr2 (309-468)||(2958131-2958289)
chr2 (350-498)||(26162702-26162847)
chr2 (356-495)||(2285887-2286026)
chr2 (329-445)||(26237955-26238071)
chr2 (318-457)||(4555250-4555390)
chr2 (340-457)||(7072589-7072710)
chr2 (314-361)||(34523223-34523270)
chr2 (351-410)||(34905969-34906028)
[»] chr7 (22 HSPs)
chr7 (311-498)||(34389056-34389243)
chr7 (314-498)||(37002144-37002328)
chr7 (308-498)||(43184468-43184658)
chr7 (314-498)||(26624728-26624913)
chr7 (311-495)||(5555467-5555651)
chr7 (314-496)||(8867733-8867915)
chr7 (340-498)||(35090177-35090335)
chr7 (311-495)||(3114099-3114283)
chr7 (314-498)||(33685547-33685731)
chr7 (314-498)||(7002708-7002892)
chr7 (314-498)||(7048579-7048763)
chr7 (310-486)||(14777119-14777295)
chr7 (331-498)||(36630816-36630983)
chr7 (350-498)||(40920003-40920151)
chr7 (331-498)||(8394125-8394292)
chr7 (354-497)||(38638237-38638380)
chr7 (349-498)||(36658199-36658348)
chr7 (390-457)||(10868514-10868583)
chr7 (318-421)||(26502797-26502899)
chr7 (318-421)||(26589815-26589917)
chr7 (329-376)||(10876829-10876876)
chr7 (315-367)||(37966614-37966666)
[»] chr6 (16 HSPs)
chr6 (309-498)||(28996708-28996897)
chr6 (331-498)||(18339106-18339273)
chr6 (311-495)||(34948761-34948945)
chr6 (311-495)||(13837801-13837985)
chr6 (314-480)||(29743266-29743432)
chr6 (309-486)||(398595-398772)
chr6 (347-498)||(33229336-33229487)
chr6 (315-416)||(24697899-24698000)
chr6 (317-427)||(31028435-31028545)
chr6 (309-367)||(13646995-13647053)
chr6 (315-416)||(24695472-24695572)
chr6 (314-367)||(34385519-34385572)
chr6 (317-368)||(2753336-2753387)
chr6 (346-409)||(3050094-3050157)
chr6 (314-368)||(21149331-21149385)
chr6 (359-408)||(24072576-24072625)
[»] chr1 (15 HSPs)
chr1 (311-498)||(35907532-35907719)
chr1 (314-497)||(17445296-17445479)
chr1 (310-495)||(7433424-7433609)
chr1 (311-486)||(26144235-26144410)
chr1 (314-498)||(3828967-3829150)
chr1 (314-498)||(42310941-42311125)
chr1 (314-498)||(321377-321561)
chr1 (331-478)||(32982076-32982223)
chr1 (314-457)||(41972314-41972458)
chr1 (314-457)||(33489670-33489815)
chr1 (310-437)||(23313217-23313345)
chr1 (309-367)||(44352614-44352672)
chr1 (314-368)||(31866960-31867014)
chr1 (314-396)||(48901207-48901288)
chr1 (350-416)||(35951427-35951493)
[»] scaffold0502 (1 HSPs)
scaffold0502 (331-498)||(5230-5397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (314-498)||(31463-31647)
[»] scaffold0041 (1 HSPs)
scaffold0041 (350-498)||(52944-53092)
[»] scaffold0069 (1 HSPs)
scaffold0069 (311-486)||(17822-17997)
[»] scaffold0002 (1 HSPs)
scaffold0002 (311-486)||(480469-480644)
[»] scaffold2142 (1 HSPs)
scaffold2142 (311-486)||(502-677)
[»] scaffold0769 (1 HSPs)
scaffold0769 (314-361)||(1260-1307)
[»] scaffold0012 (1 HSPs)
scaffold0012 (324-422)||(194021-194118)


Alignment Details
Target: chr4 (Bit Score: 184; Significance: 2e-99; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 311 - 498
Target Start/End: Complemental strand, 43143771 - 43143584
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43143771 catgggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 43143672  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43143671 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 43143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 311 - 498
Target Start/End: Complemental strand, 42333963 - 42333776
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||| |||||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42333963 catggacggtttcaccgtccagcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 42333864  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  42333863 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgataagttcatctc 42333776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 30216926 - 30216742
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  30216926 gggcggattcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaa 30216827  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  30216826 aaagaaaaatttgggcaatctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctc 30216742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 3293080 - 3292896
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  3293080 gggcggtttcaccgcccagtgaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaa 3292981  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  3292980 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 3292896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 6690419 - 6690235
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  6690419 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 6690320  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| ||||    
T  6690319 aaagaaaaatttgggcaaactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctc 6690235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 314 - 496
Target Start/End: Complemental strand, 50205261 - 50205079
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  50205261 gggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaa 50205162  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatc 496  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  50205161 aaagaaaaaattggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 50205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 311 - 498
Target Start/End: Original strand, 25930688 - 25930875
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||  |||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| |||    
T  25930688 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacattta 25930787  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  25930788 caaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 25930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 314 - 480
Target Start/End: Complemental strand, 10353068 - 10352902
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| | ||||||||| ||||||    
T  10353068 gggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaa 10352969  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 480  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10352968 aaggaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 10352902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 28877434 - 28877250
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    ||||||||||||||||||  ||||||| ||||||||  ||||| |||||||||||||||||||||||| |||||| |||||| ||||||||| |||| ||    
T  28877434 gggcggtttcaccgtccgatgaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataa 28877335  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28877334 aaagaaaaatttgggaaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctc 28877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 311 - 486
Target Start/End: Original strand, 20129290 - 20129465
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  20129290 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 20129389  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||||| |||||| |||||    
T  20129390 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattga 20129465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 48989311 - 48989495
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||| ||||||||| ||| |||| ||||||||||  ||||| |||||||||||||||||||||||| || |||| |||||| | ||||||||||||||||    
T  48989311 gggcagtttcaccgcccgacgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaa 48989410  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  48989411 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 48989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 348 - 498
Target Start/End: Original strand, 44156668 - 44156818
Alignment:
Q  348 gcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcaca 447  Q
    |||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||    
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  448 cgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 44156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 311 - 486
Target Start/End: Complemental strand, 26439466 - 26439291
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  26439466 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 26439367  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
     |||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||||| |||||    
T  26439366 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattga 26439291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 311 - 486
Target Start/End: Complemental strand, 34407471 - 34407296
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  34407471 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 34407372  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
     |||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||||| |||||    
T  34407371 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattga 34407296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 331 - 498
Target Start/End: Complemental strand, 36382512 - 36382346
Alignment:
Q  331 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 430  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| | ||||||||| |||||||| ||||||||||| ||    
T  36382512 ggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttggaca 36382414  T
Q  431 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  36382413 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 36382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 309 - 486
Target Start/End: Original strand, 47500751 - 47500928
Alignment:
Q  309 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 408  Q
    ||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |    
T  47500751 aacatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatt 47500850  T
Q  409 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    ||  |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  47500851 tatgaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 47500928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 311 - 495
Target Start/End: Complemental strand, 29319892 - 29319708
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||  || |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||    
T  29319892 catgggcggttctaccgtatggtgacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacattta 29319793  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    |||||||||||||||| |||||||||||||| |||||| |||||| |||| ||||||||||||||||||| ||||| ||||||||    
T  29319792 caaaaagaaaaatttgagcaatctgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcat 29319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 311 - 486
Target Start/End: Original strand, 13012168 - 13012343
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||||||||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  ||||||||| |||    
T  13012168 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacattta 13012267  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
     ||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  13012268 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 13012343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 355 - 498
Target Start/End: Original strand, 35545977 - 35546120
Alignment:
Q  355 ctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaat 454  Q
    ||||||||| ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  455 aggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
     |||||| |||||||||||||||||| |||||||||||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatctc 35546120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 29996167 - 29995983
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||| ||| ||||| |||||| |||| |||||||||||||||||| ||||||||||||||| ||||| | ||||||||| |||| |    
T  29996167 gggcggtttcaccgcccgacgatcccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacga 29996068  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||| ||||| || ||||||||    
T  29996067 aaagaaaaatttgggcaatctgaaaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctc 29995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 311 - 486
Target Start/End: Original strand, 43355884 - 43356059
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||||||||| ||||||   |||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  43355884 catgggcggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 43355983  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
     |||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||||| |||||    
T  43355984 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattga 43356059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 341 - 498
Target Start/End: Complemental strand, 17511391 - 17511233
Alignment:
Q  341 ggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaat 440  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||    
T  17511391 ggcggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaat 17511292  T
Q  441 tctcacacgcaaataggtctcgg-aattttatttagcacacaattgatgggttcatctc 498  Q
    | | |||||||||||||||| || ||||||||||||||||  |||||| ||||||||||    
T  17511291 tgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatctc 17511233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 314 - 485
Target Start/End: Original strand, 26448036 - 26448206
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| |||||||| ||| ||| ||| |||| ||||||||||||||||||||||||| |   |||||||||| | ||||||||||||||||    
T  26448036 gggcggtttcaccgcccggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaa 26448135  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattg 485  Q
    ||| |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| ||||    
T  26448136 aaa-aaaaatttgggcaatctgaaaattctcatacacaaataggtttcggaattttatttagcacactattg 26448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 314 - 495
Target Start/End: Original strand, 40528996 - 40529179
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcg--gtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttac 411  Q
    ||||||||  |||||  |||||||| |||||  |||| |||| ||||||||||||||||||||||||| |||||||| |||| |  ||||||||| ||||    
T  40528996 gggcggttctaccgtatggcgaccctgggcgaggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttac 40529095  T
Q  412 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    |||||||||||||||| |||| |||||||| ||||| |||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  40529096 aaaaagaaaaatttggacaatttgaaaattgtcacatgcaaataggtcttggaattttatttagcacactattgacgggttcat 40529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 309 - 480
Target Start/End: Complemental strand, 30077819 - 30077649
Alignment:
Q  309 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 408  Q
    |||| |||||||||||||| ||| ||||| ||||||||||||| ||||| |||||||| ||||||||||||||| ||||| |||||   ||||||||| |    
T  30077819 aacaggggcggtttcaccgcccg-cgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatt 30077721  T
Q  409 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 480  Q
    ||||||||||||||||||| ||||||||||||| | |||| ||||||||||| | |||||||||||||||||    
T  30077720 tacaaaaagaaaaatttggacaatctgaaaatttttacacacaaataggtcttgaaattttatttagcacac 30077649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 386 - 498
Target Start/End: Original strand, 6235575 - 6235687
Alignment:
Q  386 acccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattg 485  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  6235575 acccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattg 6235674  T
Q  486 atgggttcatctc 498  Q
    | |||||||||||    
T  6235675 acgggttcatctc 6235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 320 - 457
Target Start/End: Original strand, 30109945 - 30110084
Alignment:
Q  320 tttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaa 419  Q
    |||||||| ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| || |||| | ||||||||||||||||||||||    
T  30109945 tttcaccgcccgacgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaa 30110044  T
Q  420 aaatttgggc--aatctgaaaattctcacacgcaaatagg 457  Q
    |||||||| |  ||| |||||| |||||||||||||||||    
T  30110045 aaatttggacaaaatatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 311 - 457
Target Start/End: Original strand, 48129950 - 48130087
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||| |||| |||||||||     |||||| ||||||||||||||||||||||||| ||||||| ||||||||||||  |||||||||||||    
T  48129950 catgggcggtttaaccgcccggcgacc----tcggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacactta 48130045  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaatagg 457  Q
    ||||||||||||||||||     |||||| |||||||||||||||||    
T  48130046 caaaaagaaaaatttggg-----tgaaaactctcacacgcaaatagg 48130087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 366 - 498
Target Start/End: Original strand, 1817752 - 1817884
Alignment:
Q  366 atttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaa 465  Q
    ||||||||||||||||  ||| ||||||| | ||||| ||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  466 ttttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||| ||||| ||||  || ||||||||    
T  1817852 ttttatttaacacactattgtcggattcatctc 1817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 409 - 486
Target Start/End: Complemental strand, 13392970 - 13392893
Alignment:
Q  409 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 409 - 486
Target Start/End: Complemental strand, 13396109 - 13396032
Alignment:
Q  409 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 17249204 - 17249370
Alignment:
Q  49 tgtgatcattgatgatatcttgcaatatcatatcagcctctctctgaagtttttccattttggtctttgccctactcaccctttgaactattttaataga 148  Q
    |||||||||  ||||||||||||||||||||||||   || || |||||||||||||||||||| ||  ||  ||| ||||||| || |||||| |||||    
T  17249204 tgtgatcatctatgatatcttgcaatatcatatcaatttccctatgaagtttttccattttggttttcacctgacttacccttttaagtattttgataga 17249303  T
Q  149 aggatacaaatcagcaatgcaaaatcctcccaataactttattgattcctccattgctgatttgaac 215  Q
    ||||||||||||| |||| |||||||||||||| ||  | | |  |||||| |||||||||||||||    
T  17249304 aggatacaaatcaacaatacaaaatcctcccaacaaactcactatttcctctattgctgatttgaac 17249370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 314 - 431
Target Start/End: Original strand, 45194159 - 45194276
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||| ||||||||| ||| ||||||| |||| | |||||| ||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||||||    
T  45194159 gggcagtttcaccgcccgacgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaa 45194258  T
Q  414 aaagaaaaatttgggcaa 431  Q
    ||| ||||  ||||||||    
T  45194259 aaaaaaaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 314 - 416
Target Start/End: Original strand, 27363344 - 27363446
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    ||||||||| |||||  ||||||| |||||||||||||||||||||||||   |||||||| ||||| | ||||||||||||| ||||||||||||||||    
T  27363344 gggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaa 27363443  T
Q  414 aaa 416  Q
    |||    
T  27363444 aaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 311 - 372
Target Start/End: Original strand, 7769308 - 7769369
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttg 372  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7769308 catgggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 49908836 - 49908782
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 368  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49908836 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 356 - 424
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  356 tcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatt 424  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 5517548 - 5517494
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 368  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  5517548 gggcggtttcaccgcccggcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 367
Target Start/End: Complemental strand, 6212082 - 6212029
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 367  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  6212082 gggcggtttcaccgtccggcgacctcgggcggtcgcccgagctcgatcgataat 6212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 367
Target Start/End: Original strand, 17554979 - 17555032
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 367  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  17554979 gggcggtttcaccgtccgacgaccccgggtggtcgcccgggctcgatcgataat 17555032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 379
Target Start/End: Complemental strand, 13393054 - 13392989
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacatta 379  Q
    |||||||||||||| || |||||||||| ||||||||||||||| |||||| | ||||||| ||||    
T  13393054 gggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatatta 13392989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 379
Target Start/End: Complemental strand, 13396193 - 13396128
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacatta 379  Q
    |||||||||||||| || |||||||||| ||||||||||||||| |||||| | ||||||| ||||    
T  13396193 gggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatatta 13396128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 416
Target Start/End: Original strand, 20113775 - 20113876
Alignment:
Q  315 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaa 414  Q
    ||||||| ||||| | ||||||||||| |  |||||||  ||| ||||||||||| |  |||||||  |||||||||||||| ||||||||||||| |||    
T  20113775 ggcggttccaccgcctggcgaccccggacactcgcccgaactcaatcgataatttctttacattaggttcaacccaaaagccgattaacacacttaaaaa 20113874  T
Q  415 aa 416  Q
    ||    
T  20113875 aa 20113876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 50720529 - 50720476
Alignment:
Q  315 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 368  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||||    
T  50720529 ggcggtttcaccgcccggcgacctcgggcggtcgcccgggctcaatcaataatt 50720476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 12680251 - 12680193
Alignment:
Q  309 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 367  Q
    |||| |||||||||||||| || || ||||| |||||| ||||||||||||||||||||    
T  12680251 aacaggggcggtttcaccgcccagcaaccccaggcggtggcccgggctcgatcgataat 12680193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 3e-92; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 41369896 - 41369689
Alignment:
Q  19 cttccttgatttcttctctatgattacttttgtgatcattgatgatatcttgcaatatcatatca-gcctctctctgaagtttttccattttggtctttg 117  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  41369896 cttccttgatttcttctctatgattgtttttgtgatcattgatgatatcttgcaatataatatcatgcctttctctgaagtttttccattttggtctttg 41369797  T
Q  118 ccctactcaccctttgaactattttaatagaaggatacaaatcagcaatgcaaaatcctcccaataactttattgattcctccattgctgatttgaactc 217  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41369796 ccctacttaccctttgaagtattttaatagaaggatacaaatcagcaatgcaaaatccttccaataactttattgattcctccattgctgatttgaactc 41369697  T
Q  218 taatatgt 225  Q
    ||||||||    
T  41369696 taatatgt 41369689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 31680350 - 31680534
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  31680350 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaa 31680449  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  31680450 aaagaaaaatttgggcaatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 31680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 12279044 - 12278860
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  12279044 gggcggtttcaccgcccggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaa 12278945  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  12278944 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc 12278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 17332735 - 17332551
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  17332735 gggcggtttcaccgcccggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaa 17332636  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| || ||||||||    
T  17332635 aaagaaaaatttgggcaatctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 17332551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 31501900 - 31501716
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31501900 gggcggtttcaccgcccggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaa 31501801  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  31501800 aaagaaaaatttgggcaatctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattgatgagttcatctc 31501716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 311 - 498
Target Start/End: Original strand, 37254621 - 37254808
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  37254621 catgggcggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacactta 37254720  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  37254721 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc 37254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 345 - 498
Target Start/End: Original strand, 33430335 - 33430488
Alignment:
Q  345 gtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 444  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  445 acacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 314 - 495
Target Start/End: Original strand, 10033910 - 10034091
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    ||||||||  |||||  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  10033910 gggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 10034009  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  10034010 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 10034091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 13817960 - 13818144
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    ||||||||  |||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  13817960 gggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 13818059  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| ||||| ||| |||||||    
T  13818060 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctc 13818144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 311 - 480
Target Start/End: Complemental strand, 36293808 - 36293639
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||  |||||||||| ||||||| |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||    
T  36293808 catgggcggttctaccgtgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacattta 36293709  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 480  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  36293708 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacac 36293639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 331 - 495
Target Start/End: Complemental strand, 39657673 - 39657509
Alignment:
Q  331 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 430  Q
    ||||||||| | ||||||  |||||||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  39657673 ggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggca 39657574  T
Q  431 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  39657573 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 39657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 311 - 486
Target Start/End: Original strand, 39434676 - 39434851
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||  |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||    
T  39434676 catgggcggttctaccgtgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacattta 39434775  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    ||||| ||||||||||||||||||||||||| ||||| | ||||||||||  |||||||||||||||||| |||||    
T  39434776 caaaatgaaaaatttgggcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattga 39434851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 309 - 486
Target Start/End: Complemental strand, 26283507 - 26283330
Alignment:
Q  309 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 408  Q
    ||||||||||||| ||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||| |    
T  26283507 aacatgggcggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatt 26283408  T
Q  409 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    || |||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  26283407 tataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 26283330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 349 - 486
Target Start/End: Original strand, 16155015 - 16155152
Alignment:
Q  349 cccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacac 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| ||||||||||||||| ||||||    
T  16155015 cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac 16155114  T
Q  449 gcaaataggtctcggaattttatttagcacacaattga 486  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  16155115 gcaaataggtcttggaattttatttagcacactattga 16155152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 333 - 497
Target Start/End: Complemental strand, 1776541 - 1776377
Alignment:
Q  333 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaat 432  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| | |||||| ||||| | ||||||||| |||||||||||||||||||||||||    
T  1776541 cgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 1776442  T
Q  433 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatct 497  Q
     |||||||| |||||||||||||||||| ||||||||||||||||||| || ||  |||||||||    
T  1776441 ttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 361 - 495
Target Start/End: Complemental strand, 16334013 - 16333879
Alignment:
Q  361 cgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtct 460  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  461 cggaattttatttagcacacaattgatgggttcat 495  Q
     ||||||||||||||||||| ||||| || |||||    
T  16333913 tggaattttatttagcacactattgacggattcat 16333879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 310 - 480
Target Start/End: Complemental strand, 3155819 - 3155649
Alignment:
Q  310 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactt 409  Q
    ||||||||||||  | |||  ||||| ||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||| | ||||||||| ||    
T  3155819 acatgggcggttctatcgtatggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacattt 3155720  T
Q  410 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 480  Q
    | |||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  3155719 ataaaaagaaaaatttggacaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacac 3155649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 333 - 498
Target Start/End: Original strand, 19985941 - 19986106
Alignment:
Q  333 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaat 432  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| | |||| |||| ||||||||||||||||||||| |||    
T  19985941 cgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaat 19986040  T
Q  433 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    || |||||| |||||||||||||||||| | ||||||||||| ||||| |||||  ||||||||||    
T  19986041 ctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 36291354 - 36291538
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||| |||| ||||||||||| ||||| |||||| |||||||||||||||||||   |||| |||||   ||||||||| ||||||    
T  36291354 gggcggtttcaccgcccgccgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaa 36291453  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||| |||||| | |||| |||||||||||| |||||||||||| ||||| ||||| |||||||||||    
T  36291454 aaagaaaaatttgggcaatctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctc 36291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 350 - 498
Target Start/End: Original strand, 43068896 - 43069044
Alignment:
Q  350 ccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 449  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| ||| |    
T  43068896 ccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatg 43068995  T
Q  450 caaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
     ||||| |||||||||||||||||||||||| ||||  || ||||||||    
T  43068996 taaataagtctcggaattttatttagcacactattgccggattcatctc 43069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 344 - 457
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  344 ggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttggg--caatctgaaaatt 441  Q
    |||||||| |||||||||||||||||||||||||||||  ||| ||||||||| |||||||||||||||||||||||||||||||   ||| ||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  442 ctcacacgcaaatagg 457  Q
    ||||||||||||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 43 - 250
Target Start/End: Complemental strand, 41366541 - 41366334
Alignment:
Q  43 tacttttgtgatcattgatgatatcttgcaatatcatatcagcctctctctgaagtttttccattttggtctttgccctactcaccctttgaactatttt 142  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||||| ||||||||||| | |||  || ||| || ||| | | ||||||  |||||    
T  41366541 tacttttgtgatcatcgatgatctcttgcaatatcatatcagtctctctatgaagtttttcaagttttttccttggccaacttaacatttgaagaatttt 41366442  T
Q  143 aatagaaggatacaaatcagcaatgcaaaatcctcccaataactttattgattcctccattgctgatttgaactctaatatgtgtctactcttttttcca 242  Q
    |||||||||||||||||| ||||   ||||||||||||||| ||| | |  ||||| |||||||||||| ||| ||  |  |||| || |||||||||||    
T  41366441 aatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattgctgatttaaacacttcttggtgtttattcttttttcca 41366342  T
Q  243 aaagctgc 250  Q
    || |||||    
T  41366341 aatgctgc 41366334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 31225300 - 31225166
Alignment:
Q  46 ttttgtgatcattgatgatatcttgcaatatcatatcagcctctctctgaagtttttccattttggtctttgccctactcaccctttgaactattttaat 145  Q
    |||| ||||||| |||||||||||||||||||||||||  |||| | ||||| ||||| | ||||||||| ||||||||||||| |||||  ||||| ||    
T  31225300 ttttatgatcatcgatgatatcttgcaatatcatatcaatctctttatgaagcttttcaactttggtcttcgccctactcacccattgaagcatttttat 31225201  T
Q  146 agaaggatacaaatcagcaatgcaaaatcctccca 180  Q
    ||||||||||| |||| |||| |||||||||||||    
T  31225200 agaaggatacacatcaacaatacaaaatcctccca 31225166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 45 - 181
Target Start/End: Complemental strand, 41324448 - 41324312
Alignment:
Q  45 cttttgtgatcattgatgatatcttgcaatatcatatcagcctctctctgaagtttttccattttggtctttgccctactcaccctttgaactattttaa 144  Q
    ||||||||||| | ||| || ||||||||||||||||||  |||| | ||||||||||||||||||| ||| ||||||||||| | |||||  | |||||    
T  41324448 cttttgtgatcgtcgataatgtcttgcaatatcatatcaatctctttgtgaagtttttccattttggccttcgccctactcacgcattgaagcaatttaa 41324349  T
Q  145 tagaaggatacaaatcagcaatgcaaaatcctcccaa 181  Q
    ||||||||||||||||| |||| ||||  ||||||||    
T  41324348 tagaaggatacaaatcaacaatacaaatgcctcccaa 41324312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 31178468 - 31178602
Alignment:
Q  46 ttttgtgatcattgatgatatcttgcaatatcatatcagcctctctctgaagtttttccattttggtctttgccctactcaccctttgaactattttaat 145  Q
    |||| ||||||| || ||||||||||||||||||||||  |||| | ||||  ||||| | |||||||||  ||| |||||||| |||||  ||||||||    
T  31178468 ttttatgatcatcgacgatatcttgcaatatcatatcaatctctttatgaaacttttcaaatttggtcttcaccccactcacccgttgaagcattttaat 31178567  T
Q  146 agaaggatacaaatcagcaatgcaaaatcctccca 180  Q
    ||||||||||| ||||||||| |||||||||||||    
T  31178568 agaaggatacacatcagcaatacaaaatcctccca 31178602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 31188513 - 31188647
Alignment:
Q  46 ttttgtgatcattgatgatatcttgcaatatcatatcagcctctctctgaagtttttccattttggtctttgccctactcaccctttgaactattttaat 145  Q
    |||| ||||||  |||||||||||||||||||||||||  |||| | ||||| ||||| | ||| ||||| ||||||||||||| |||||  |||||||     
T  31188513 ttttatgatcaacgatgatatcttgcaatatcatatcaatctctttatgaagcttttcaactttcgtcttcgccctactcacccattgaaacattttaac 31188612  T
Q  146 agaaggatacaaatcagcaatgcaaaatcctccca 180  Q
    ||||||||||| ||||||||| |||||| ||||||    
T  31188613 agaaggatacacatcagcaatacaaaattctccca 31188647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 183
Target Start/End: Complemental strand, 41332355 - 41332221
Alignment:
Q  49 tgtgatcattgatgatatcttgcaatatcatatcagcctctctctgaagtttttccattttggtctttgccctactcaccctttgaactattttaataga 148  Q
    ||||||| | |||||| ||||||| ||||||||||  |||||| |||| ||||||||||||||||||  |||||||||  | |||||  |||||||||||    
T  41332355 tgtgatcgtcgatgatgtcttgcattatcatatcaagctctctatgaattttttccattttggtcttctccctactcatgcattgaagcattttaataga 41332256  T
Q  149 aggatacaaatcagcaatgcaaaatcctcccaata 183  Q
    |||||||||||| |||||   ||||||||| ||||    
T  41332255 aggatacaaatctgcaatttcaaatcctcctaata 41332221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 45 - 181
Target Start/End: Complemental strand, 41316379 - 41316243
Alignment:
Q  45 cttttgtgatcattgatgatatcttgcaatatcatatcagcctctctctgaagtttttccattttggtctttgccctactcaccctttgaactattttaa 144  Q
    ||||||||||| | |||||| ||||||||| ||||||||  |||| | ||||||||||||||||||||||| || |||||||  | |||||  | |||||    
T  41316379 cttttgtgatcgtcgatgatgtcttgcaatgtcatatcaagctctttgtgaagtttttccattttggtcttcgctctactcaagcattgaagcaatttaa 41316280  T
Q  145 tagaaggatacaaatcagcaatgcaaaatcctcccaa 181  Q
    |||||||| |||||||  |||| ||||  ||||||||    
T  41316279 tagaaggaaacaaatccacaatacaaacgcctcccaa 41316243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 416
Target Start/End: Original strand, 202622 - 202724
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||| ||||||  || |||||||||||||||||||||||||| || |||||||    |||||||||||| ||||| ||||| ||||    
T  202622 gggcggtttcaccgcccgacgaccctaggtggtcgcccgggctcgatcgataatttgtgtacattaggtcgaacccaaaagcccattaagacactaacaa 202721  T
Q  414 aaa 416  Q
    |||    
T  202722 aaa 202724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 41337282 - 41337150
Alignment:
Q  51 tgatcattgatgatatcttgcaatatcatatcagcctctctctgaagtttttccattttggtctttgccctactcaccctttgaactattttaatagaag 150  Q
    |||||||||||||| |||||||||||| |||||  |||||  || | | | || | | |||||||  | ||||| ||| |||||| ||||||||||||||    
T  41337282 tgatcattgatgatgtcttgcaatatcctatcaatctctccttgtaatctctcaactctggtcttcactctacttaccttttgaagtattttaatagaag 41337183  T
Q  151 gatacaaatcagcaatgcaaaatcctcccaata 183  Q
    ||||||| |||||||| |||||| |||||||||    
T  41337182 gatacaagtcagcaatacaaaattctcccaata 41337150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 41328348 - 41328225
Alignment:
Q  43 tacttttgtgatcattgatgatatcttgcaatatcatatcagcctctctctgaagtttttccattttggtctttgccctactcaccctttgaactatttt 142  Q
    ||||| ||||||| | |||||| |||||   ||||||||||  |||| | |||||||||||||||||||||||  ||||| ||| || |||||  | |||    
T  41328348 tacttctgtgatcgtcgatgatgtcttgtgctatcatatcaatctctgtatgaagtttttccattttggtcttctccctagtcatccattgaagcaattt 41328249  T
Q  143 aatagaaggatacaaatcagcaat 166  Q
    |||||||||||||||||| |||||    
T  41328248 aatagaaggatacaaatctgcaat 41328225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 361
Target Start/End: Complemental strand, 26543949 - 26543902
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatc 361  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  26543949 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 26543902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 41310639 - 41310558
Alignment:
Q  45 cttttgtgatcattgatgatatcttgcaatatcatatcagcctctctctgaagtttttccattttggtctttgccctactca 126  Q
    ||||||||||| | |||||| |||||||||||||||| |  |||| | |||| |||||||||||||| ||| ||||||||||    
T  41310639 cttttgtgatcgtcgatgatgtcttgcaatatcatataaatctctttgtgaactttttccattttggccttcgccctactca 41310558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 41286320 - 41286280
Alignment:
Q  140 tttaatagaaggatacaaatcagcaatgcaaaatcctccca 180  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  41286320 tttaatagaaggatacaaatcaacaatgcaaaatcctccca 41286280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 172; Significance: 3e-92; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 311 - 498
Target Start/End: Complemental strand, 11018399 - 11018212
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11018399 catgggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 11018300  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  11018299 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc 11018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 45182964 - 45183148
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  45182964 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 45183063  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  45183064 aaagaaaaatttgggcaatctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctc 45183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 311 - 498
Target Start/End: Complemental strand, 6503756 - 6503569
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||    
T  6503756 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacactta 6503657  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6503656 caaaaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctc 6503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 6931078 - 6930894
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||    
T  6931078 gggcggtttcaccgcccggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaa 6930979  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  6930978 aaagaaaaatttaggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 6930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 33040936 - 33041120
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  33040936 gggcggtttcaccgcccggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaa 33041035  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||  |||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  33041036 aaagaaaaatttgaacaatttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33041120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 311 - 498
Target Start/End: Original strand, 27935158 - 27935345
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||| |||||||||| | ||| |||| |||| ||||||||||||||||||||||||||||||||||| || ||||||||||||  |||||||||||||    
T  27935158 catgggtggtttcaccgcctggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacactta 27935257  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| || ||||| |||||||||||    
T  27935258 caaaaagaaaaatttgggcaatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc 27935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 331 - 498
Target Start/End: Complemental strand, 34084289 - 34084122
Alignment:
Q  331 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 430  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||| | ||||||||| |||||||||||||||||||||||    
T  34084289 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 34084190  T
Q  431 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    || |||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  34084189 atatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctc 34084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 311 - 486
Target Start/End: Complemental strand, 6269613 - 6269438
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||   |||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  6269613 catgggcggttctaccgtgtagcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 6269514  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  6269513 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 6269438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 314 - 480
Target Start/End: Complemental strand, 19565685 - 19565519
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||||||||| ||||| ||||  | ||||||||| ||||||    
T  19565685 gggcggtttcaccgcccggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaa 19565586  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 480  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19565585 aaagaaaaatttggacaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 19565519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 331 - 486
Target Start/End: Original strand, 19390146 - 19390301
Alignment:
Q  331 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 430  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||| |||||||||||||||||||||||    
T  19390146 ggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggca 19390245  T
Q  431 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  19390246 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 19390301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 311 - 486
Target Start/End: Complemental strand, 22968631 - 22968456
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||    
T  22968631 catgggcggttctaccgtgtagcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacattta 22968532  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||||| | ||||||||||||||||| |||||    
T  22968531 caaaaagaaaaatttgggcaatctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattga 22968456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 311 - 486
Target Start/End: Original strand, 39771770 - 39771945
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  39771770 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 39771869  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
     |||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||||| |||||    
T  39771870 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattga 39771945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 314 - 480
Target Start/End: Original strand, 45335858 - 45336023
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||| |||||||||| ||||| ||||| || |||||||| ||||||    
T  45335858 gggcggtttcaccgcccggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtca-ttaacacatttacaa 45335956  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 480  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  45335957 aaagaaaaatctgggcaatctgaaaattcttacacgcaaataggtcttggaattttatttagcacac 45336023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 35514249 - 35514429
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||| ||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||| | ||||  ||||||||||| | ||||||||||    ||    
T  35514249 gggcagtttcaccgcccggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacacac----aa 35514344  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||| |||||| ||||| |||||||||||    
T  35514345 aaagaaaaatttggacaatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctc 35514429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 344 - 498
Target Start/End: Complemental strand, 40081893 - 40081741
Alignment:
Q  344 ggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattct 443  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||| |||||||| |    
T  40081893 ggtcgcccgggctcgatcgataatttttgaacattagactcaacc-aaaagctcattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgt 40081795  T
Q  444 cacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||| ||| || ||||| |||||||||| ||||| |||||||||||    
T  40081794 cacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctc 40081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 353 - 457
Target Start/End: Original strand, 5135291 - 5135397
Alignment:
Q  353 ggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgc 450  Q
    |||||||||||| ||||||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||| |  |||| |||||||||||||| |    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacac 5135390  T
Q  451 aaatagg 457  Q
    |||||||    
T  5135391 aaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 368
Target Start/End: Original strand, 6890981 - 6891035
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 368  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  6890981 gggcggtttcaccgcccggcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 431
Target Start/End: Original strand, 5354692 - 5354809
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||  |||||||  ||||||||   ||||| | | ||| ||| ||||||||  ||    
T  5354692 gggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatccttaattttctcacattaggtccaacctataggcccatttacacacttcaaa 5354791  T
Q  414 aaagaaaaatttgggcaa 431  Q
    ||| ||||| ||||||||    
T  5354792 aaaaaaaaaattgggcaa 5354809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 315 - 388
Target Start/End: Original strand, 22922141 - 22922214
Alignment:
Q  315 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacc 388  Q
    ||||||| ||||||  ||||| ||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  22922141 ggcggttccaccgtatggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaacc 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 498
Target Start/End: Original strand, 22922214 - 22922262
Alignment:
Q  450 caaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||| ||| ||||||||||||| ||||| ||||| |||||||||||    
T  22922214 caaatagatcttggaattttatttaacacactattgacgggttcatctc 22922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 8e-90; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 311 - 498
Target Start/End: Complemental strand, 34137012 - 34136825
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34137012 catgggtggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacactta 34136913  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34136912 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctc 34136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 311 - 498
Target Start/End: Original strand, 4403988 - 4404175
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4403988 catggacggtttcactggccggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatactta 4404087  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4404088 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 4404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 23402091 - 23402275
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  23402091 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaa 23402190  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||  ||||||||||    
T  23402191 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc 23402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 329 - 498
Target Start/End: Complemental strand, 16788194 - 16788025
Alignment:
Q  329 ccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttggg 428  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16788194 ccggcaaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttggg 16788095  T
Q  429 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||| |||| |||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  16788094 caatcttaaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 16788025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 29728570 - 29728386
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    ||||||||  |||||  ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||    
T  29728570 gggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaa 29728471  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||  |||||||||||||||||| ||||| |||||||||||    
T  29728470 aaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc 29728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 345 - 498
Target Start/End: Complemental strand, 3648947 - 3648794
Alignment:
Q  345 gtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 444  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  3648947 gtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtc 3648848  T
Q  445 acacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||| ||||| | ||||||||||||||||||| ||||| |||||||||||    
T  3648847 acacgcaagtaggttttggaattttatttagcacactattgacgggttcatctc 3648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 331 - 495
Target Start/End: Original strand, 15838286 - 15838449
Alignment:
Q  331 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 430  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| ||||| | ||||||||| |||||||| ||||||||||||||    
T  15838286 ggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttgggca 15838384  T
Q  431 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  15838385 atctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 15838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 2729380 - 2729196
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||| |  ||| ||||||||| ||||||||||||| ||    
T  2729380 gggcggtttcaccgcccggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataa 2729281  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||  ||| |||||| |||||| ||||| |||||||||||||||  ||||||||||||||||| |||||||| ||||||||    
T  2729280 aaagaaattttttggcaatttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatggattcatctc 2729196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 318 - 498
Target Start/End: Original strand, 36408538 - 36408718
Alignment:
Q  318 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaag 417  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||| ||||||||||    
T  36408538 ggtttcaccgcccggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaag 36408637  T
Q  418 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||| ||| |||||| |||||||||| |||||| |||||||||| |||||||||||| ||||| ||||  || ||||||||    
T  36408638 aaaatttttggcaatttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctc 36408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 353 - 485
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  353 ggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaa 452  Q
    |||||||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  453 ataggtctcggaattttatttagcacacaattg 485  Q
    |||||||||| ||||||||||||||||| ||||    
T  9877342 ataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 311 - 486
Target Start/End: Original strand, 39914495 - 39914669
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||| ||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||    
T  39914495 catggacggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 39914594  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
     ||||| ||||||||||||||| |||||||| ||||| | |||||||||| |||||||||||| |||||| |||||    
T  39914595 taaaaa-aaaaatttgggcaatttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattga 39914669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 347 - 457
Target Start/End: Original strand, 3435285 - 3435397
Alignment:
Q  347 cgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc--aatctgaaaattctc 444  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctc 3435384  T
Q  445 acacgcaaatagg 457  Q
    | |||||||||||    
T  3435385 aaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 363 - 498
Target Start/End: Original strand, 42230971 - 42231104
Alignment:
Q  363 ataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcg 462  Q
    ||||||||||||||||| |  |||| |||||| | ||||||||  ||||||||||||||||||||||||| |||||||||||| | |||||||||||||     
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  463 gaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||| ||||| || ||||||||    
T  42231069 gaattttatttagcacactattgacggattcatctc 42231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 416
Target Start/End: Complemental strand, 10397220 - 10397122
Alignment:
Q  318 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaa 416  Q
    |||| ||||| |||||||| ||||||  |||||||||||| ||||||||||| | ||||||||  |||||||||||||| ||||||||| ||| |||||    
T  10397220 ggttacaccgcccggcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacacagttaaaaaaa 10397122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 424
Target Start/End: Complemental strand, 40470637 - 40470567
Alignment:
Q  354 gctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatt 424  Q
    ||||||||||||||||||||||||||||| |||  |||||| | ||||||||||||| ||||| |||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 465
Target Start/End: Original strand, 376459 - 376519
Alignment:
Q  406 acttacaaaaagaaaaatt-tgggcaatctgaaaattctcacacgcaaataggtctcggaa 465  Q
    ||||| ||||| ||||||| || | ||| |||||||||||||||||||| |||||||||||    
T  376459 acttaaaaaaaaaaaaattgtgcgaaatatgaaaattctcacacgcaaagaggtctcggaa 376519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 3e-83; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 45418566 - 45418750
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  45418566 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaa 45418665  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  45418666 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 45418750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 314 - 497
Target Start/End: Original strand, 8147334 - 8147518
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| ||||||||||||||||||    
T  8147334 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaa 8147433  T
Q  414 aaagaaaaatttgggcaatctg-aaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatct 497  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||    
T  8147434 aaagaaaaatttgggcaatctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 44084787 - 44084603
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| |||||||   ||||||||||||||||    
T  44084787 gggcggtttcaccgcccggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaa 44084688  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  44084687 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc 44084603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 314 - 495
Target Start/End: Complemental strand, 8059517 - 8059336
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||| ||||||||| || |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8059517 gggcggtttcaccgcccgacgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaa 8059418  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    |||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  8059417 aaagaaaaatttggccaatttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat 8059336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 310 - 495
Target Start/End: Original strand, 42439965 - 42440150
Alignment:
Q  310 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactt 409  Q
    ||||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||    
T  42439965 acatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacattt 42440064  T
Q  410 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||| ||||| || |||||    
T  42440065 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcat 42440150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 314 - 497
Target Start/End: Original strand, 770977 - 771165
Alignment:
Q  314 gggcggtttcaccgtccggcgacc-----ccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 408  Q
    |||||||||||||| |||||||||     ||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||| |||||||||||    
T  770977 gggcggtttcaccgcccggcgaccggatcccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacact 771076  T
Q  409 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatct 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||    
T  771077 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 334 - 486
Target Start/End: Complemental strand, 41251798 - 41251646
Alignment:
Q  334 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  41251798 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 41251699  T
Q  434 tgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  41251698 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 41251646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 311 - 495
Target Start/End: Original strand, 35962695 - 35962879
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||    
T  35962695 catgggcggttctaccgtatggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacattta 35962794  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  35962795 caaaaagaaaattttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 35962879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 349 - 498
Target Start/End: Complemental strand, 12756986 - 12756837
Alignment:
Q  349 cccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacac 448  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12756986 cccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacac 12756887  T
Q  449 gcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  12756886 gcaaataagtctcggaattttatttagcacactattgacgggttcatctc 12756837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 331 - 498
Target Start/End: Complemental strand, 31581789 - 31581622
Alignment:
Q  331 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 430  Q
    ||||||| ||||||||||||| ||||||| ||||| |||||||| |||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  31581789 ggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggca 31581690  T
Q  431 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  31581689 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 31581622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 309 - 486
Target Start/End: Complemental strand, 17445228 - 17445053
Alignment:
Q  309 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 408  Q
    |||||||||||||  |||||  ||||||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| ||||||||| |    
T  17445228 aacatgggcggttctaccgtgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatt 17445131  T
Q  409 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  17445130 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 17445053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 311 - 495
Target Start/End: Complemental strand, 32127328 - 32127144
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  | |||  ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||  ||||||||| |||    
T  32127328 catgggcggttctagcgtatggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacattta 32127229  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  32127228 caaaaagaaaaatttaggcaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcat 32127144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 311 - 486
Target Start/End: Complemental strand, 6403991 - 6403816
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||| |||    
T  6403991 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta 6403892  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
     |||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  6403891 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 6403816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 334 - 495
Target Start/End: Original strand, 16405603 - 16405764
Alignment:
Q  334 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc 433  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||  ||||||||| ||| |||||||||||||||| |||||    
T  16405603 gaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatc 16405702  T
Q  434 tgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||| ||||| ||||||||    
T  16405703 tgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcat 16405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 311 - 495
Target Start/End: Original strand, 18981597 - 18981780
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||  |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||| ||| |||    
T  18981597 catgggcggttctaccgtatggcgaccc-gggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacattta 18981695  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    |||||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||||||||  |||| ||||||||    
T  18981696 caaaaagaaaaatttgggcaatttaaaaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcat 18981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 309 - 468
Target Start/End: Complemental strand, 2958289 - 2958131
Alignment:
Q  309 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 408  Q
    |||||||||||||  |||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |    
T  2958289 aacatgggcggttctaccgtatggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacatt 2958191  T
Q  409 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattt 468  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  2958190 tacaaagagaaaaatttgggtaatctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 350 - 498
Target Start/End: Complemental strand, 26162847 - 26162702
Alignment:
Q  350 ccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 449  Q
    ||||||||  |||||||||||| ||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| ||     
T  26162847 ccgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaaca 26162748  T
Q  450 caaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||   ||||||||||||  ||||| |||||||||||    
T  26162747 caaataggtctcgga---ttatttagcacattattgacgggttcatctc 26162702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 356 - 495
Target Start/End: Original strand, 2285887 - 2286026
Alignment:
Q  356 tcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaata 455  Q
    |||||||||||||||||||||||| |  ||||| ||||| | ||||||||| |||| ||| |||||||||| |||||||||||||| |||||||||||||    
T  2285887 tcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaata 2285986  T
Q  456 ggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    ||| | ||||||||||||||||||| ||||| | ||||||    
T  2285987 ggttttggaattttatttagcacactattgacgtgttcat 2286026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 329 - 445
Target Start/End: Original strand, 26237955 - 26238071
Alignment:
Q  329 ccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttggg 428  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||| ||||||| | |||||||||||||||||||||||||||||||    
T  26237955 ccggcgaccccgggcggtcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttggg 26238053  T
Q  429 c-aatctgaaaattctca 445  Q
    | |||||||||| |||||    
T  26238054 caaatctgaaaactctca 26238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 318 - 457
Target Start/End: Complemental strand, 4555390 - 4555250
Alignment:
Q  318 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaag 417  Q
    |||| ||||| ||||||| | |||||||||||  || ||||||||||||||||||||||| | || ||||||||||||   |||||||||||||||||||    
T  4555390 ggttccaccgcccggcgatctcgggcggtcgct-ggactcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaag 4555292  T
Q  418 aaaaatttgggc--aatctgaaaattctcacacgcaaatagg 457  Q
    |||| |||||||  |||||||||||||||||||| |||||||    
T  4555291 aaaattttgggcaaaatctgaaaattctcacacgtaaatagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 7072710 - 7072589
Alignment:
Q  340 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaatta--acacacttacaaaaagaaaaatttgggcaa--tctg 435  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| ||||  ||||||||| ||||||||||  |||| |||  ||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctg 7072611  T
Q  436 aaaattctcacacgcaaatagg 457  Q
    ||||||||| |||| |||||||    
T  7072610 aaaattctcgcacgtaaatagg 7072589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 34523223 - 34523270
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatc 361  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  34523223 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 34523270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 34905969 - 34906028
Alignment:
Q  351 cgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||||||||||||||||||||  |  |||||||||||| |||||||||||||    
T  34905969 cgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacacactta 34906028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 1e-82; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 311 - 498
Target Start/End: Complemental strand, 34389243 - 34389056
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  34389243 catgggcgatttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacactta 34389144  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || || |||||||||||    
T  34389143 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc 34389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 37002328 - 37002144
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  37002328 gggcggtttcaccgcccggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaa 37002229  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  37002228 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 37002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 308 - 498
Target Start/End: Complemental strand, 43184658 - 43184468
Alignment:
Q  308 gaacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacac 407  Q
    ||||| |||||||||||||| |||||||  |||||||||||| ||||||||||||||||||||| | ||| ||||| |||||||||||||||||||| ||    
T  43184658 gaacaggggcggtttcaccgcccggcgattccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatac 43184559  T
Q  408 ttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  43184558 ttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 43184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 26624728 - 26624913
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat-cgataatttttgcacattagactcaacccaaaagccaattaacacacttaca 412  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||| ||||||| ||| |||||||  ||||||||||||||||    
T  26624728 gggcggtttcaccgcccggcaaccccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttaca 26624827  T
Q  413 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  26624828 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 26624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 311 - 495
Target Start/End: Original strand, 5555467 - 5555651
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||    
T  5555467 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcattta 5555566  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  5555567 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 5555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 314 - 496
Target Start/End: Complemental strand, 8867915 - 8867733
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||| ||||||    
T  8867915 gggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaa 8867816  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatc 496  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  8867815 aaagaaaaatttgggcaatcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc 8867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 340 - 498
Target Start/End: Original strand, 35090177 - 35090335
Alignment:
Q  340 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaa 439  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  440 ttctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 35090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 311 - 495
Target Start/End: Complemental strand, 3114283 - 3114099
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||  || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  3114283 catgggcggttctaccgtatggtgaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 3114184  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  3114183 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 3114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 33685547 - 33685731
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  33685547 gggcggtttcaccgcccggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaa 33685646  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||| ||||| ||||| |||||    
T  33685647 aaagaaaaatttgggcaatctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgggtttatctc 33685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 7002708 - 7002892
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||||  |||||| || |||||||||||||||||||||||| |||||    
T  7002708 gggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaa 7002807  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  7002808 aaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 7048579 - 7048763
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||||  |||||| || |||||||||||||||||||||||| |||||    
T  7048579 gggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaa 7048678  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  7048679 aaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 310 - 486
Target Start/End: Complemental strand, 14777295 - 14777119
Alignment:
Q  310 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactt 409  Q
    ||||||||||||  |||||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||    
T  14777295 acatgggcggttctaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacattt 14777196  T
Q  410 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  14777195 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 14777119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 331 - 498
Target Start/End: Original strand, 36630816 - 36630983
Alignment:
Q  331 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 430  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||    
T  36630816 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 36630915  T
Q  431 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||||| ||||| |||||||||||    
T  36630916 atctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc 36630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 350 - 498
Target Start/End: Complemental strand, 40920151 - 40920003
Alignment:
Q  350 ccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 449  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |    
T  40920151 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 40920052  T
Q  450 caaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  40920051 caaataggtctcggaattttatttagcacactattgacgggttcatctc 40920003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 331 - 498
Target Start/End: Original strand, 8394125 - 8394292
Alignment:
Q  331 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 430  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||||| |||||||| ||||||||||||||    
T  8394125 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca 8394224  T
Q  431 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||| ||||| ||||| |||||    
T  8394225 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctc 8394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 354 - 497
Target Start/End: Complemental strand, 38638380 - 38638237
Alignment:
Q  354 gctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 453  Q
    ||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38638380 gctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 38638281  T
Q  454 taggtctcggaattttatttagcacacaattgatgggttcatct 497  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||    
T  38638280 taggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 349 - 498
Target Start/End: Original strand, 36658199 - 36658348
Alignment:
Q  349 cccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacac 448  Q
    ||||| |||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  36658199 cccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacac 36658298  T
Q  449 gcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  36658299 gcaaataggtctcggaattttatttagcacactattgacgggttcatctc 36658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 390 - 457
Target Start/End: Complemental strand, 10868583 - 10868514
Alignment:
Q  390 aaaagccaattaacacacttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 457  Q
    ||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  10868583 aaaagcccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 26502797 - 26502899
Alignment:
Q  318 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaag 417  Q
    |||| ||||||  ||||||||| ||| |||||||||||||||||||   |||||||| ||||  | ||||||||||||| |||||||||| ||||||||     
T  26502797 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-tacaaaaaa 26502895  T
Q  418 aaaa 421  Q
    ||||    
T  26502896 aaaa 26502899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 26589917 - 26589815
Alignment:
Q  318 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaag 417  Q
    |||| ||||||  ||||||||| ||| |||||||||||||||||||   |||||||| ||||  | ||||||||||||| |||||||||| ||||||||     
T  26589917 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-tacaaaaaa 26589819  T
Q  418 aaaa 421  Q
    ||||    
T  26589818 aaaa 26589815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 376
Target Start/End: Complemental strand, 10876876 - 10876829
Alignment:
Q  329 ccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcaca 376  Q
    ||||||| |||| | |||||||||||||||||||||||||||||||||    
T  10876876 ccggcgaacccgtgtggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 37966666 - 37966614
Alignment:
Q  315 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 367  Q
    ||||||||||||| ||||||||| | |||||||| ||| ||||||||||||||    
T  37966666 ggcggtttcaccgcccggcgacctcaggcggtcgtccgagctcgatcgataat 37966614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 2e-81; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 309 - 498
Target Start/End: Original strand, 28996708 - 28996897
Alignment:
Q  309 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 408  Q
    |||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||    
T  28996708 aacaggggcggtttcaccgcccggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacact 28996807  T
Q  409 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  28996808 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 28996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 331 - 498
Target Start/End: Original strand, 18339106 - 18339273
Alignment:
Q  331 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 430  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  431 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 18339273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 311 - 495
Target Start/End: Complemental strand, 34948945 - 34948761
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  34948945 catgggcggttctaccgtatggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 34948846  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| ||| | ||||||||||||||||| ||||| ||||||||    
T  34948845 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcat 34948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 311 - 495
Target Start/End: Original strand, 13837801 - 13837985
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||  |||||||||||||| |||| |||| ||||||||||||||||| ||||||||||||||||||||||  || |||||| |||    
T  13837801 catgggcggttctaccgtatggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacattta 13837900  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  13837901 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 13837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 314 - 480
Target Start/End: Original strand, 29743266 - 29743432
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||| ||||| |||||   ||||||||| |||||     
T  29743266 gggcggtttcaccgtccgacgatcccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacag 29743365  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 480  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29743366 aaagaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 29743432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 309 - 486
Target Start/End: Original strand, 398595 - 398772
Alignment:
Q  309 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 408  Q
    ||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |    
T  398595 aacatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatt 398694  T
Q  409 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    || ||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  398695 tataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 347 - 498
Target Start/End: Complemental strand, 33229487 - 33229336
Alignment:
Q  347 cgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcac 446  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||| ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  447 acgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||| ||||| ||||||| |||||||||||||||| ||||  || ||||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattgccggattcatctc 33229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 315 - 416
Target Start/End: Complemental strand, 24698000 - 24697899
Alignment:
Q  315 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaa 414  Q
    ||||||||||||| ||||||||||||| |  |||||||||||| ||||||||||||| |||||||| | ||||||||||||| |||||||||||||||||    
T  24698000 ggcggtttcaccgcccggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaa 24697901  T
Q  415 aa 416  Q
    ||    
T  24697900 aa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 317 - 427
Target Start/End: Complemental strand, 31028545 - 31028435
Alignment:
Q  317 cggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaa 416  Q
    ||||||||||| |||||||||||| ||||| |||||| |||||||||||||||||||||||||||  ||||| ||||||  ||||||||| |||||||||    
T  31028545 cggtttcaccgcccggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaa 31028446  T
Q  417 gaaaaatttgg 427  Q
    | ||| |||||    
T  31028445 ggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 367
Target Start/End: Original strand, 13646995 - 13647053
Alignment:
Q  309 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 367  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  13646995 aacaggggcggtttcaccacccggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 416
Target Start/End: Original strand, 24695472 - 24695572
Alignment:
Q  315 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaa 414  Q
    |||||||||||||||||  |||| ||| |  |||||| ||||  |||||| ||||||  ||||||| ||||||||||||||| |||||||||||||||||    
T  24695472 ggcggtttcaccgtccga-gacctcggacactcgcccaggctaaatcgatcattttttaacattaggctcaacccaaaagcccattaacacacttacaaa 24695570  T
Q  415 aa 416  Q
    ||    
T  24695571 aa 24695572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 367
Target Start/End: Complemental strand, 34385572 - 34385519
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 367  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  34385572 gggcggtttcaccgcccggcgaccccgggcggttgccctggctcgatcgataat 34385519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 2753336 - 2753387
Alignment:
Q  317 cggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 368  Q
    ||||||||||||||||||||||  |||||||||||| |||| ||||||||||    
T  2753336 cggtttcaccgtccggcgaccctaggcggtcgcccgagctcaatcgataatt 2753387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 409
Target Start/End: Original strand, 3050094 - 3050157
Alignment:
Q  346 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactt 409  Q
    |||||||||||| ||| ||||||||||||||||   | ||||| ||||||| ||||||||||||    
T  3050094 tcgcccgggctcaatcaataatttttgcacattgagcgcaaccgaaaagcccattaacacactt 3050157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 21149385 - 21149331
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 368  Q
    |||| ||||||||| |||| |||| ||||||||||| |||||| |||||||||||    
T  21149385 gggcagtttcaccgcccggtgacctcgggcggtcgctcgggcttgatcgataatt 21149331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 408
Target Start/End: Original strand, 24072576 - 24072625
Alignment:
Q  359 atcgataatttttgcacattagactcaacccaaaagccaattaacacact 408  Q
    |||||||||||||||||||||||   ||||||||| || |||||||||||    
T  24072576 atcgataatttttgcacattagatcgaacccaaaaacccattaacacact 24072625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 4e-73; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 311 - 498
Target Start/End: Original strand, 35907532 - 35907719
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  35907532 catgggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacactta 35907631  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| | |||||||||    
T  35907632 caaaaagaaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc 35907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 314 - 497
Target Start/End: Original strand, 17445296 - 17445479
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||  | |||||||||||  ||||||||||||||| |||| |||||||||| ||||||||  ||||||||||| ||||||||||||||||||    
T  17445296 gggcggtttcattgcccggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaa 17445395  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatct 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  17445396 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 310 - 495
Target Start/End: Original strand, 7433424 - 7433609
Alignment:
Q  310 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactt 409  Q
    ||||||||||||  |||||  ||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  7433424 acatgggcggttctaccgtatggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacattt 7433523  T
Q  410 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 495  Q
    |||||||||||| |||||||||||| |||||| |||||| ||||||||||| | ||||||||||||||||| ||||| ||||||||    
T  7433524 acaaaaagaaaattttgggcaatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcat 7433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 311 - 486
Target Start/End: Original strand, 26144235 - 26144410
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||    
T  26144235 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 26144334  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
     ||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  26144335 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 26144410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 3828967 - 3829150
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    ||||||||||| |  ||||| ||||||| ||||||| |||| |||||||||||||||||||||||| || |||||||||||   ||||||||||||||||    
T  3828967 gggcggtttcatcacccggcaaccccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaa 3829066  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  3829067 aaagaaaaatttgggcaatctgaaaattttcatacgcaaataggtct-ggaattttatttagcacactattgacgggttcatctc 3829150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 42311125 - 42310941
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    ||||||||  |||||  ||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  42311125 gggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaa 42311026  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| | |||||||||||| || | ||||| |||||||||||    
T  42311025 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc 42310941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 314 - 498
Target Start/End: Complemental strand, 321561 - 321377
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||  |||||||   |||||||||| |||||||||||||||||||||||  |||||||  ||||||||||| | ||||||||| ||||||    
T  321561 gggcggtttcaccacccggcgatttcgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaa 321462  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||  ||||| |||||||||||    
T  321461 aaagaaaaatttgggcaatctgaaaattctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctc 321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 331 - 478
Target Start/End: Complemental strand, 32982223 - 32982076
Alignment:
Q  331 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 430  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||| | |||||||||||||||||||| ||    
T  32982223 ggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggaca 32982124  T
Q  431 atctgaaaattctcacacgcaaataggtctcggaattttatttagcac 478  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  32982123 atctgaaaattgtcacacacaaataggtcttggaattttatttagcac 32982076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 314 - 457
Target Start/End: Complemental strand, 41972458 - 41972314
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||| |||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||  ||||| ||||||| ||||||||||||||||    
T  41972458 gggcggttccaccgtccagcgaccccgggcggtcgcctgg-ctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaa 41972360  T
Q  414 aaagaaaaatttgg--gcaatctgaaaattctcacacgcaaatagg 457  Q
    ||||||||||||||    ||||||||||||||||||||||||||||    
T  41972359 aaagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 314 - 457
Target Start/End: Original strand, 33489670 - 33489815
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    |||||||||||||  ||||||||||||| ||||||  |||| | | ||||||||||||| ||||||||||||| | ||||||| |||||||||||||| |    
T  33489670 gggcggtttcaccacccggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttacta 33489769  T
Q  414 aaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 457  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||    
T  33489770 aaagaaaaatttgagcaaaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 23313217 - 23313345
Alignment:
Q  310 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataattt-ttgcacattagactcaacccaaaagccaattaacacact 408  Q
    ||||||||||||  |||||  ||||| | |||||||| ||||||||||||| ||| |||| ||||||||||||||||||  |||||   ||||||||| |    
T  23313217 acatgggcggttctaccgtatggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatt 23313316  T
Q  409 tacaaaaagaaaaatttgggcaatctgaa 437  Q
    |||||||||||||||||||||||||||||    
T  23313317 tacaaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 44352672 - 44352614
Alignment:
Q  309 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 367  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  44352672 aacaggggcggtttcaccatccggcgaccccgggaggtcgcccgggctcgatcgataat 44352614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 314 - 368
Target Start/End: Original strand, 31866960 - 31867014
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 368  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  31866960 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggttcgaccgataatt 31867014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 314 - 396
Target Start/End: Complemental strand, 48901288 - 48901207
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcc 396  Q
    |||||||| ||||| ||||| || ||||||||| ||| ||| |||||||||||||| |||||||||| | |||||||||||||    
T  48901288 gggcggttccaccgcccggcaactccgggcggtggccgggg-tcgatcgataatttatgcacattaggcccaacccaaaagcc 48901207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 35951493 - 35951427
Alignment:
Q  350 ccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaa 416  Q
    ||||||||||||||||||||||| |||||||    ||||||| |||| ||||||||||| |||||||    
T  35951493 ccgggctcgatcgataatttttgtacattaggtcgaacccaatagcccattaacacactaacaaaaa 35951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 331 - 498
Target Start/End: Original strand, 5230 - 5397
Alignment:
Q  331 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 430  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  431 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 125; Significance: 4e-64; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 314 - 498
Target Start/End: Original strand, 31463 - 31647
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 413  Q
    ||||||||||| || ||||||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  31463 gggcggtttcatcgcccggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaa 31562  T
Q  414 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||| |||||| |||||  ||||||||||    
T  31563 aaagaaaaatttggacaatctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc 31647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 121; Significance: 9e-62; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 350 - 498
Target Start/End: Original strand, 52944 - 53092
Alignment:
Q  350 ccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 449  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |    
T  52944 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 53043  T
Q  450 caaataggtctcggaattttatttagcacacaattgatgggttcatctc 498  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  53044 caaataggtctcggaattttatttagcacactattgacgggttcatctc 53092  T

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Target: scaffold0069 (Bit Score: 116; Significance: 9e-59; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 311 - 486
Target Start/End: Original strand, 17822 - 17997
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    |||||||||||  |||||  |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  17822 catgggcggttctaccgtgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 17921  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||||| | ||||||||||||||||| |||||    
T  17922 caaaaagaaaaatttgggcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattga 17997  T

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Target: scaffold0002 (Bit Score: 116; Significance: 9e-59; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 311 - 486
Target Start/End: Complemental strand, 480644 - 480469
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||    
T  480644 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 480545  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
     ||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  480544 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 480469  T

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Target: scaffold2142 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 311 - 486
Target Start/End: Original strand, 502 - 677
Alignment:
Q  311 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 410  Q
    ||||||||||| ||||||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||    
T  502 catgggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 601  T
Q  411 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 486  Q
     ||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  602 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 677  T

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Target: scaffold0769 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 1260 - 1307
Alignment:
Q  314 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatc 361  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  1260 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 1307  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 422
Target Start/End: Original strand, 194021 - 194118
Alignment:
Q  324 accgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaa 422  Q
    |||| |||||||||||||||||||||||||||||||||  ||||||   |||||||| | ||||| | | ||| ||| |||||||| |||||| |||||    
T  194021 accgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaacctataggcccatttacacactt-caaaaaaaaaaa 194118  T

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