View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17761_low_28 (Length: 409)

Name: NF17761_low_28
Description: NF17761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17761_low_28
NF17761_low_28
[»] chr8 (8 HSPs)
chr8 (168-395)||(42758561-42758788)
chr8 (1-123)||(26589596-26589718)
chr8 (1-71)||(6524758-6524826)
chr8 (122-169)||(42758491-42758538)
chr8 (122-161)||(27018849-27018888)
chr8 (123-161)||(9061990-9062028)
chr8 (122-163)||(34310338-34310379)
chr8 (367-395)||(1852256-1852284)
[»] chr5 (8 HSPs)
chr5 (168-395)||(1403090-1403317)
chr5 (3-123)||(14461557-14461677)
chr5 (123-164)||(24122256-24122297)
chr5 (121-169)||(1403334-1403382)
chr5 (122-161)||(39879053-39879092)
chr5 (123-161)||(2416276-2416314)
chr5 (123-161)||(39348765-39348803)
chr5 (121-161)||(33826377-33826417)
[»] chr2 (5 HSPs)
chr2 (1-123)||(10732846-10732968)
chr2 (1-123)||(4792188-4792310)
chr2 (1-123)||(1977987-1978106)
chr2 (1-57)||(16550121-16550177)
chr2 (123-161)||(27313617-27313655)
[»] chr6 (4 HSPs)
chr6 (1-125)||(32934828-32934952)
chr6 (1-123)||(7733826-7733948)
chr6 (3-64)||(24586598-24586659)
chr6 (123-161)||(2277274-2277312)
[»] chr1 (3 HSPs)
chr1 (1-123)||(18550862-18550984)
chr1 (1-70)||(2980063-2980132)
chr1 (123-161)||(38443885-38443923)
[»] chr3 (3 HSPs)
chr3 (23-123)||(8354876-8354976)
chr3 (1-70)||(5700186-5700255)
chr3 (87-123)||(5700162-5700198)
[»] chr7 (2 HSPs)
chr7 (122-161)||(24773398-24773437)
chr7 (123-161)||(35350195-35350233)
[»] scaffold0531 (1 HSPs)
scaffold0531 (123-161)||(10948-10986)
[»] chr4 (1 HSPs)
chr4 (8-57)||(38160452-38160501)


Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-106; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 168 - 395
Target Start/End: Original strand, 42758561 - 42758788
Alignment:
Q  168 aaaaattgacgtgatatagttagaatactaaaagacagagatataaatttaacttcaacaaagggtctaactaaagttgattatcacttacattatatta 267  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  42758561 aaaaattgatgtgatatagttagaatactaaaatacagagatataaatttaacttcaaccaaggatctaactaaagttgattatcacttacattatatta 42758660  T
Q  268 ataatgatactatcaaatattacggaatatttcgtcataaacaacattagatgtaaaattgatatctttgttgtttcatcactgattagtatcattaacc 367  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42758661 ataatgatactatcaaatattacggaatacttcctcataaacaacattagatgtaaaattgatatctttgttgtttcatcactgatcagtatcattaacc 42758760  T
Q  368 cttctcttgatgtaactcttgaaacaac 395  Q
    |||||||||| |||||||||||||||||    
T  42758761 cttctcttgaggtaactcttgaaacaac 42758788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 26589596 - 26589718
Alignment:
Q  1 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtagggttttcttaaagaagaatattatagtggggtc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  26589596 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagcggggttttcttaaagaagaatattatagtggggtc 26589695  T
Q  101 aaacatataaaaatatggtatta 123  Q
    ||||||||||||| |||||||||    
T  26589696 aaacatataaaaagatggtatta 26589718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6524758 - 6524826
Alignment:
Q  1 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtagggtt 71  Q
    ||||||||||||||||||||||| |||||||| |||  ||||||||||| ||||||||||||||| |||||    
T  6524758 agtttatattgtttgtctcaagtttataaattaagt--tgtgtgagcaatctaaaaaattaaagttgggtt 6524826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 42758491 - 42758538
Alignment:
Q  122 tactagatttccaacccgtgcgccgcacgggttttatgagctttataa 169  Q
    |||||||||||  |||||| ||||||||||||||||||||||||||||    
T  42758491 tactagatttctgacccgtacgccgcacgggttttatgagctttataa 42758538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 27018888 - 27018849
Alignment:
Q  122 tactagatttccaacccgtgcgccgcacgggttttatgag 161  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  27018888 tactagattactaacccgtgcgccgcacgggttttatgag 27018849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 9062028 - 9061990
Alignment:
Q  123 actagatttccaacccgtgcgccgcacgggttttatgag 161  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  9062028 actagattactaacccgtgcgccgcacgggttttatgag 9061990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 34310379 - 34310338
Alignment:
Q  122 tactagatttccaacccgtgcgccgcacgggttttatgagct 163  Q
    |||||||| ||| ||||||||||||||||||| |||||||||    
T  34310379 tactagatctccgacccgtgcgccgcacgggtcttatgagct 34310338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 395
Target Start/End: Complemental strand, 1852284 - 1852256
Alignment:
Q  367 ccttctcttgatgtaactcttgaaacaac 395  Q
    |||||||||||||||||||||||||||||    
T  1852284 ccttctcttgatgtaactcttgaaacaac 1852256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 4e-97; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 168 - 395
Target Start/End: Complemental strand, 1403317 - 1403090
Alignment:
Q  168 aaaaattgacgtgatatagttagaatactaaaagacagagatataaatttaacttcaacaaagggtctaactaaagttgattatcacttacattatatta 267  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1403317 aaaaattgatgtgatatagttagaatactaaaagacagagatataaatttaacttcaacaaacggtctaactaaagttgattatcacttacattatatta 1403218  T
Q  268 ataatgatactatcaaatattacggaatatttcgtcataaacaacattagatgtaaaattgatatctttgttgtttcatcactgattagtatcattaacc 367  Q
    ||||||||||||||||||||||| ||||| ||  |||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||     
T  1403217 ataatgatactatcaaatattacagaatactttctcataaacaacagtagatgtaaaattgatatctttgttgtttcatcagtgatgagtatcattaact 1403118  T
Q  368 cttctcttgatgtaactcttgaaacaac 395  Q
    ||||| |||| |||||||||||||||||    
T  1403117 cttcttttgaggtaactcttgaaacaac 1403090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 14461557 - 14461677
Alignment:
Q  3 tttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtagggttttcttaaagaagaatattatagtggggtcaa 102  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  14461557 tttatatcgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtggagttgtcttaaagaagaatattatagtggggtcaa 14461656  T
Q  103 acatataaaaatatggtatta 123  Q
    |||||||||||||||||||||    
T  14461657 acatataaaaatatggtatta 14461677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 24122297 - 24122256
Alignment:
Q  123 actagatttccaacccgtgcgccgcacgggttttatgagctt 164  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  24122297 actagattgacaacccgtgcgccgcacgggttttatgagctt 24122256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 1403382 - 1403334
Alignment:
Q  121 ttactagatttccaacccgtgcgccgcacgggttttatgagctttataa 169  Q
    ||||||||||||  ||||||| ||||||||||||||||||||| |||||    
T  1403382 ttactagatttctgacccgtgtgccgcacgggttttatgagctgtataa 1403334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 39879092 - 39879053
Alignment:
Q  122 tactagatttccaacccgtgcgccgcacgggttttatgag 161  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  39879092 tactagattactaacccgtgcgccgcacgggttttatgag 39879053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 2416276 - 2416314
Alignment:
Q  123 actagatttccaacccgtgcgccgcacgggttttatgag 161  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  2416276 actagattactaacccgtgcgccgcacgggttttatgag 2416314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 39348803 - 39348765
Alignment:
Q  123 actagatttccaacccgtgcgccgcacgggttttatgag 161  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  39348803 actagattactaacccgtgcgccgcacgggttttatgag 39348765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 33826377 - 33826417
Alignment:
Q  121 ttactagatttccaacccgtgcgccgcacgggttttatgag 161  Q
    |||||||||| | ||||| ||||||||||||||||||||||    
T  33826377 ttactagattactaacccatgcgccgcacgggttttatgag 33826417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 1e-60; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 10732968 - 10732846
Alignment:
Q  1 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtagggttttcttaaagaagaatattatagtggggtc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10732968 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtggggttttcttaaagaagaatattatagtggggtc 10732869  T
Q  101 aaacatataaaaatatggtatta 123  Q
    |||||||||||||||||||||||    
T  10732868 aaacatataaaaatatggtatta 10732846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 4792188 - 4792310
Alignment:
Q  1 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtagggttttcttaaagaagaatattatagtggggtc 100  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4792188 agtttatattgtttgtctgaagtgtataaattgagttacgtgtgagcaacctaaaaaattaaagtagagttttcttaaagaagaatattatagtggggtc 4792287  T
Q  101 aaacatataaaaatatggtatta 123  Q
    |||||||||||||||||||||||    
T  4792288 aaacatataaaaatatggtatta 4792310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 1978106 - 1977987
Alignment:
Q  1 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtagggttttcttaaagaagaatattatagtggggtc 100  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||    
T  1978106 agtttatattgtt---ctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtggagttttcttaaagaagaatattatagtgggatc 1978010  T
Q  101 aaacatataaaaatatggtatta 123  Q
    |||||||||||||||||||||||    
T  1978009 aaacatataaaaatatggtatta 1977987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16550121 - 16550177
Alignment:
Q  1 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaa 57  Q
    |||||| ||| ||||||||||  ||||||||||||| ||||||| ||||||||||||    
T  16550121 agtttacattatttgtctcaatagtataaattgagtcatgtgtgggcaacctaaaaa 16550177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 27313617 - 27313655
Alignment:
Q  123 actagatttccaacccgtgcgccgcacgggttttatgag 161  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  27313617 actagattactaacccgtgcgccgcacgggttttatgag 27313655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 32934828 - 32934952
Alignment:
Q  1 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtagggttttcttaaagaagaatattatagtggggtc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  32934828 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtggagttttcttaaagaagaatattatagtggggtc 32934927  T
Q  101 aaacatataaaaatatggtattact 125  Q
    |||||||||||||||||||||||||    
T  32934928 aaacatataaaaatatggtattact 32934952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 7733826 - 7733948
Alignment:
Q  1 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtagggttttcttaaagaagaatattatagtggggtc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7733826 agtttatattgtttgtctcaagtgtataaattgagttatgtgtaagcaacctaaaaaattaaagtggggttttcttaaagaagaatattatagtggggtc 7733925  T
Q  101 aaacatataaaaatatggtatta 123  Q
    |||||||||||||||||||||||    
T  7733926 aaacatataaaaatatggtatta 7733948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 24586598 - 24586659
Alignment:
Q  3 tttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaag 64  Q
    |||||||||||| | |||||| |||||||||||| |||||||||||| ||||||||||||||    
T  24586598 tttatattgtttatttcaagtatataaattgagtcatgtgtgagcaatctaaaaaattaaag 24586659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 2277312 - 2277274
Alignment:
Q  123 actagatttccaacccgtgcgccgcacgggttttatgag 161  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  2277312 actagattactaacccgtgcgccgcacgggttttatgag 2277274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 4e-51; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 18550862 - 18550984
Alignment:
Q  1 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtagggttttcttaaagaagaatattatagtggggtc 100  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||    
T  18550862 agtttatattgtttgtcttaagtgtataaattgagttacgtgtgagcaacctaaaaaattaaagtagagttttcttaaagaagaatatcatagtggagtc 18550961  T
Q  101 aaacatataaaaatatggtatta 123  Q
    |||||||||||||||||||||||    
T  18550962 aaacatataaaaatatggtatta 18550984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2980132 - 2980063
Alignment:
Q  1 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtagggt 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  2980132 agtttatattgtttgtctcaagtgtataaattgagtcatgtgtgagcaatctaaaaaattaaagtggggt 2980063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 38443923 - 38443885
Alignment:
Q  123 actagatttccaacccgtgcgccgcacgggttttatgag 161  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  38443923 actagattactaacccgtgcgccgcacgggttttatgag 38443885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 9e-43; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 8354876 - 8354976
Alignment:
Q  23 tgtataaattgagttatgtgtgagcaacctaaaaaattaaagtagggttttcttaaagaagaatattatagtggggtcaaacatataaaaatatggtatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8354876 tgtataaattgagttatgtgtgagcaacctaaaaaattaaagtgaggttttcttaaagaagaatattatagtgtggtcaaacatataaaaatatggtatt 8354975  T
Q  123 a 123  Q
    |    
T  8354976 a 8354976  T

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Target: chr3; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5700255 - 5700186
Alignment:
Q  1 agtttatattgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaaattaaagtagggt 70  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  5700255 agtttatattgtttatctcaagtgtataaattgagtcatgtgtgagcaatctaaaaaattaaagtggggt 5700186  T

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Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 5700198 - 5700162
Alignment:
Q  87 attatagtggggtcaaacatataaaaatatggtatta 123  Q
    |||| ||||||||||||||||||||||||||||||||    
T  5700198 attaaagtggggtcaaacatataaaaatatggtatta 5700162  T

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Target: chr7 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 24773398 - 24773437
Alignment:
Q  122 tactagatttccaacccgtgcgccgcacgggttttatgag 161  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  24773398 tactagattactaacccgtgcgccgcacgggttttatgag 24773437  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 35350233 - 35350195
Alignment:
Q  123 actagatttccaacccgtgcgccgcacgggttttatgag 161  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  35350233 actagattactaacccgtgcgccgcacgggttttatgag 35350195  T

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Target: scaffold0531 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 10948 - 10986
Alignment:
Q  123 actagatttccaacccgtgcgccgcacgggttttatgag 161  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  10948 actagattactaacccgtgcgccgcacgggttttatgag 10986  T

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Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 38160452 - 38160501
Alignment:
Q  8 attgtttgtctcaagtgtataaattgagttatgtgtgagcaacctaaaaa 57  Q
    ||||||| |||||||| |||||||| ||| ||||||| ||||||||||||    
T  38160452 attgtttatctcaagtatataaattaagtcatgtgtgggcaacctaaaaa 38160501  T

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