View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17761_low_51 (Length: 311)
Name: NF17761_low_51
Description: NF17761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17761_low_51 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 23 - 288
Target Start/End: Complemental strand, 41604818 - 41604550
Alignment:
| Q |
23 |
aaaaaattatatattcaattaatgtgtcacgccatagtcnnnnnnnaggcaagtgtcacgttatagtcgctacctaattctttacaattttaatgatgta |
122 |
Q |
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| T |
41604818 |
aaaaaattatatattcaattaatgtgtcacgccatagtctttttttaggcaagtgtcacgttatagtcgctacctaattctttacaattttaatgatgta |
41604719 |
T |
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| Q |
123 |
tttgccaattcataaagaatgccaaaatt---tttaattgatgtctacaattttaaagactaatttatctatgcactcttttagattttcactaattaca |
219 |
Q |
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|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41604718 |
tttgtcaattcataaagaatgccaaaattacttttaattgatgtctacaattttaaagactaatttatctatgcactcttttagattttcactaattaca |
41604619 |
T |
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| Q |
220 |
aacttatgatgtgagtgcatctttttaactttgttactattattttaaacagggaagtggtggccagct |
288 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41604618 |
aacttatcatgtgagtgcatctttttaactttgttactattattttaaacagggaagtggtggccagct |
41604550 |
T |
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