View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17761_low_69 (Length: 250)
Name: NF17761_low_69
Description: NF17761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17761_low_69 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 15 - 235
Target Start/End: Original strand, 31759329 - 31759549
Alignment:
| Q |
15 |
tatgtgggtttgacaatttgtattggaagtcatgtcctaacagcttgttttttctttgttacttatgctacactaagatgctaatatatacatcataagt |
114 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31759329 |
tatgtgggtttgacaatttgtattggaagtcatgtcctaacagcttgttttttctttgttacttatgctacactaagatgctaatatatacatcataagt |
31759428 |
T |
|
| Q |
115 |
agcatagcatgtatggcattgtttccttctgccatggcaagcaatatgcacaatgacacgaacacttcaatcttgtttcttcaaatacgttacctttggt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31759429 |
agcatagcatgtatggcattgtttccttctgccatggcaagcaatatgcacaatgacacgaacacttcaatcttgtttcttcaaatacgttacctttggt |
31759528 |
T |
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| Q |
215 |
tcctttattcattgacttctt |
235 |
Q |
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||||||||||||||||||||| |
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| T |
31759529 |
tcctttattcattgacttctt |
31759549 |
T |
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