View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17762_low_12 (Length: 229)
Name: NF17762_low_12
Description: NF17762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17762_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 55130141 - 55130251
Alignment:
| Q |
107 |
gtaagaatgtataaacgtgtcaaattatcccaaacatatttagtaatattattatatttttcaagttgcattcctaacataattattgatccaagtaagg |
206 |
Q |
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| T |
55130141 |
gtaagaacgtataaacgtgtcaaattatcccaaacatatttagtaatattattatatttttcaagttgcattcctaacataattattgatccaagtaagg |
55130240 |
T |
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| Q |
207 |
atattgaaatt |
217 |
Q |
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| T |
55130241 |
atcttaaaatt |
55130251 |
T |
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