View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_high_105 (Length: 273)
Name: NF17763_high_105
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_high_105 |
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Alignment Details
Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 65 - 256
Target Start/End: Original strand, 30318416 - 30318607
Alignment:
| Q |
65 |
cctctcaaatcaccacccttataagaaatataatctttctaccatannnnnnnngtcaaagacaatgtaaatattcaaaattccctcgaaatagaaaata |
164 |
Q |
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| T |
30318416 |
cctctcaaatcaccacccttataagaaatataatctttctaccatattatttttgtcaaagacaatgtaaatattcaaaattccctcgaaatagaaaata |
30318515 |
T |
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| Q |
165 |
tgtgttttttccttcttaagcgaatgaaagcattcaatagctacaaaagcattattagtaataagccttccatccagaaaaacactatgttc |
256 |
Q |
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| T |
30318516 |
tgtgttttttccttcttaagcgaatgaaagcattcaatagctaaaaaagcattattagtgataagccttccatccagaaaaacactatgttc |
30318607 |
T |
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