View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_high_106 (Length: 272)
Name: NF17763_high_106
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_high_106 |
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Alignment Details
Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 37 - 229
Target Start/End: Original strand, 3160736 - 3160928
Alignment:
| Q |
37 |
ataagaaaatgttgtcattgttagctaaaagtatcataataattgagaaaattggcagtggctatacgagcattttataattacatgtgaatcaatttgt |
136 |
Q |
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| T |
3160736 |
ataagaaaatgttgtcattgttagctaaaagtatcataataattgagaaaattggcagtggctatacgagcattttataattacatgtgaatcaatttgt |
3160835 |
T |
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| Q |
137 |
aatgctgttatttttgtcttttgatgcatccttgttaaattatgctctcttcgttccttataagtcatttttccttttttcatataataagaa |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |
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| T |
3160836 |
aatgctgttatttttgtcttttgatgcatccttgttaaattatgctctcttcgttccttacaagtcatttttactttttcaatataataagaa |
3160928 |
T |
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