View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_high_123 (Length: 254)
Name: NF17763_high_123
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_high_123 |
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Alignment Details
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 32104033 - 32103808
Alignment:
| Q |
15 |
tcttcacttcatccttcaaattaaaccatttctcttttcttaaccaacaaaccttattctatatatgatcttatacaaacacatatagtagtatttattg |
114 |
Q |
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| T |
32104033 |
tcttcacttcatccttcaaattaaaccatttctcttttcttaaccaataaaccttcttctatatatgatcttatacaaacacatatagtagtatttattg |
32103934 |
T |
|
| Q |
115 |
aatctctcccgtatccacctcaaagtcttaacccttttaaagttaaagcttttccttagtctcacctacaagccatacacacatacctgcaagtcttcta |
214 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32103933 |
aatctctcccgtatccacctcaaagtcataacccttttaaagttaaacctctttcttagtctcacctacaagccatacacacatacctgcaagtcttcta |
32103834 |
T |
|
| Q |
215 |
ttctatatactttcttcattgaaagt |
240 |
Q |
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|||||||||||||||||||||||||| |
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| T |
32103833 |
ttctatatactttcttcattgaaagt |
32103808 |
T |
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