View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_high_126 (Length: 252)
Name: NF17763_high_126
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_high_126 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 49187476 - 49187252
Alignment:
| Q |
13 |
agcaaaggaaatggctaaggcggcactagagagatagagttcacccaagtgaccaacaatcatgatggatacaacttgtaaaagatattgtgaagatgtt |
112 |
Q |
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| T |
49187476 |
agcaaaggaaatggctaaggcggcactagagagatagagttcacctaagtgaccaacaatcatgatggacacaacttgtaaaagatattgtgaagatgtt |
49187377 |
T |
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| Q |
113 |
acagctaccataggacctgataggtaacaaatcctcttcaattctttcctgtaaatatcccaactaatttctctattcttcctctcttcttcatcaccat |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49187376 |
acagctaccataggacctgataggtaacaaatcctcttcaattctttcctgtaaatatcccaactaatttctctattcttcctctcttcttcatcaccat |
49187277 |
T |
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| Q |
213 |
tctctgctttcgaatcaatatgttt |
237 |
Q |
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||||||||||||||||||||||||| |
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| T |
49187276 |
tctctgctttcgaatcaatatgttt |
49187252 |
T |
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