View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_high_132 (Length: 246)
Name: NF17763_high_132
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_high_132 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 55301669 - 55301429
Alignment:
| Q |
1 |
attaagaagcaaaggaatctatatacacagacataaacatgctaaaaatagtagaatacaaggacaagattgatgaatgaatatacctgcactccgtcag |
100 |
Q |
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| T |
55301669 |
attaagaagcaaaggaatctatatacacagacataaacatgctaaaaatagtagaatacaaggacaagattgatgaatgaatatacctgcactccgtcag |
55301570 |
T |
|
| Q |
101 |
cgccaaatacctcccgaagcatagcccgtatcatggatctctttcctacatttgggggtccttcaaatataaaatgattacagccacacccacctttaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55301569 |
cgccaaatacctcccgaagcatagcccgtatcatggatctctttcctacatttgggggtccttcaaatataaaatgattacagccacacccacctttaac |
55301470 |
T |
|
| Q |
201 |
ctatatacgcagcaattacaaaagaaattatattacctatg |
241 |
Q |
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| T |
55301469 |
ctatatacgcagcaattacaaaagaaattatattacctatg |
55301429 |
T |
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