View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_high_54 (Length: 395)
Name: NF17763_high_54
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_high_54 |
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Alignment Details
Target: chr8 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 2 - 374
Target Start/End: Original strand, 33832068 - 33832437
Alignment:
| Q |
2 |
ggttttggaggatgcatgatgtgtagtgaatgatataatattctaagaagtataataatttataatttagaggtacactatatggtccacatgaattatt |
101 |
Q |
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| T |
33832068 |
ggttttggaggatgcatgatgtgtagtgaatgatata---ttctaagaagtagaataatttataatttagaggtacactatatggtccacatgaattatt |
33832164 |
T |
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| Q |
102 |
ttcctctcttcgatgtcatatatcatctatttgaaactagaagatcgtaaatattttcactttaaattacatacaagtttatattcatatggcctacaat |
201 |
Q |
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| T |
33832165 |
ttcctctcttcgatgtcatatatcatctatttgaaactagaagatcataaatattttcactttaaattacatacaagtttatattcatatggcctacaat |
33832264 |
T |
|
| Q |
202 |
ctcattgactaagaatgtttaacatgtaaattataattataaggatgcatattgtggcaaacaatgggaacgaggtgacataactattattcagtttgat |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
33832265 |
ctcattgactaagaatgtttaacatgtaaattataattataaggatgcatattgtggcaaacaatgggaacgaggtgacataactattattcattttgat |
33832364 |
T |
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| Q |
302 |
tacaataaataataatctaatgaaacatcaaatcaattaggagactcattactaaaataaacatgaccctttt |
374 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33832365 |
tacaataaataataatctaatgaaacatcaaatcaattaggagactcattactaaaataaacatgaccctttt |
33832437 |
T |
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