View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_high_62 (Length: 372)
Name: NF17763_high_62
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_high_62 |
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Alignment Details
Target: chr2 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 36332753 - 36333107
Alignment:
| Q |
1 |
aattatatatttgaatatactaatgatttgtatttggaaatacagggaggtggtaacaaatcaggaggtgaaagcagtgattcagcactatcaagcaaaa |
100 |
Q |
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| T |
36332753 |
aattatatatttgaatatactaatgatttgtatttggaaatacagggaggtggtaacaaatcaggaggtgaaagcagtgattcagcactatcaagcaaaa |
36332852 |
T |
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| Q |
101 |
atgagaacccttttgagccagaatcacccttaagtagtaaaaaagcatcttctttttcatcagatcataataataataatatggatcagcagaatcttca |
200 |
Q |
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| T |
36332853 |
atgagaacccttttgagccagaatcacccttaagtagtaaaaaagcatcttctttttcatcagatc---ataataataatatggatcagcagaatcttca |
36332949 |
T |
|
| Q |
201 |
gctacaacaacagaagatgataatatccaatgatgcttctgctgctataagaacagcctcttcatcacagaatcaaatatcagcagcagccaaagaaaag |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36332950 |
gctacaacaacagaagatgataatatccaatgatgcttctgctgctataagaacagcctcttcatcacagaatcaaatatcagcagcagccaaagaaaag |
36333049 |
T |
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| Q |
301 |
gttaatagt--nnnnnnntaatcactgatactgttaaagtgttaaatcacttagttat |
356 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
36333050 |
gttaatagtaaaaaaaaataatcactgatactgttaaagtgttaaatcacttagttat |
36333107 |
T |
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