View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_high_67 (Length: 364)
Name: NF17763_high_67
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_high_67 |
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Alignment Details
Target: chr1 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 346
Target Start/End: Original strand, 38710347 - 38710691
Alignment:
| Q |
1 |
catgctttgaaaatcacatatgatggaagataaaggggtgtggcagaggaagacaattatccaacaacgagataaagcaatttcaaagaagaaggcatgg |
100 |
Q |
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| T |
38710347 |
catgctttgaaaatcacatatgatggaagataaaggggtgtggcagaggaagacaattatccaacaacgagataaagcaatttcaaagaagaaggcatag |
38710446 |
T |
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| Q |
101 |
ttcttggacttaggttgtagtaaccatatgtgtggtaataaaaaatggttctttgaaggagagagagtaatcttatatgaaatattggaggcattataca |
200 |
Q |
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| T |
38710447 |
ttcttggacttaggttgtagtaaccatatgtgtggtaataaaaaatggttctttgaaggagagagagtaatcttataagaaatattggaggcattataca |
38710546 |
T |
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| Q |
201 |
actcattcctagtgtgtagtacatctcatagttgaagaaacaatctatagggcaattgccggagaaggggctgactataatatttcaacatgataaatgc |
300 |
Q |
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| T |
38710547 |
actcattcctagtgtgtagtacatctcatagttgaag-aacaatctatagggcaattgcaggagaaggggctgactataatatttcaacatgataaatgc |
38710645 |
T |
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| Q |
301 |
aaagtgtatcttaaagataaaggattgattcttgaatcaaagatgt |
346 |
Q |
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| T |
38710646 |
aaagtgtatcttaaagatattggattgattcttggatcaaagatgt |
38710691 |
T |
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