View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_high_81 (Length: 316)
Name: NF17763_high_81
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_high_81 |
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Alignment Details
Target: chr2 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 12694353 - 12694651
Alignment:
| Q |
1 |
tactccgaggggttatagtcaacggggaactgatttgtaagggaacataattttcgtacgatacttgtagtttgtgtgaaacttcaagtttgagattagt |
100 |
Q |
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| T |
12694353 |
tactccgaggggttatagtcaatggggaactgatttgtaagggaacataattttcgtacgatacttgtagtttgtgtgaaacttcaagtttgagattagt |
12694452 |
T |
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| Q |
101 |
tgctttgaatcatcgacaagtggtagttcgtgaggaccattgataatgtgttgcttggatagatcttgtgttttgtgcaagacttaatggttcaaaaaga |
200 |
Q |
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| T |
12694453 |
tactttgaatcatcgacaagtggtagttcgtgaggaccattgataatgtgttgctttgatagatcttgtgttttgtgtaagacttaatggttcaaaaaga |
12694552 |
T |
|
| Q |
201 |
actttcattcgtaagaagtgatttatgttgagggaggtgctcgcggagagctaagagattgtatcaaacttgatagttcgaagagagctaagagattgt |
299 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12694553 |
actttcattcgtaagaagtgatttatgttgagggacgtgctcgcggagagctaagagattgtatcaaacttgatagttcgaagagagctaagagattgt |
12694651 |
T |
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