View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17763_low_126 (Length: 265)

Name: NF17763_low_126
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17763_low_126
NF17763_low_126
[»] chr2 (6 HSPs)
chr2 (162-250)||(25944429-25944515)
chr2 (62-130)||(43627013-43627081)
chr2 (62-138)||(26681388-26681464)
chr2 (62-130)||(35694148-35694216)
chr2 (62-108)||(31594091-31594137)
chr2 (64-136)||(33547380-33547453)
[»] chr6 (4 HSPs)
chr6 (162-238)||(5987147-5987223)
chr6 (62-138)||(8873383-8873459)
chr6 (66-138)||(13754973-13755045)
chr6 (62-138)||(15673332-15673408)
[»] chr8 (3 HSPs)
chr8 (162-250)||(22630519-22630611)
chr8 (66-138)||(16421569-16421641)
chr8 (62-138)||(2871699-2871774)
[»] chr1 (5 HSPs)
chr1 (62-138)||(32353854-32353930)
chr1 (62-138)||(38231194-38231270)
chr1 (64-138)||(48073991-48074066)
chr1 (62-108)||(37530101-37530147)
chr1 (66-134)||(3692140-3692207)
[»] chr5 (2 HSPs)
chr5 (163-242)||(19353847-19353926)
chr5 (64-138)||(34858252-34858327)
[»] chr3 (6 HSPs)
chr3 (66-138)||(29308915-29308987)
chr3 (62-138)||(23601280-23601356)
chr3 (62-139)||(6177035-6177112)
chr3 (62-158)||(2814057-2814160)
chr3 (180-238)||(26530734-26530792)
chr3 (62-138)||(6517930-6518006)
[»] chr7 (5 HSPs)
chr7 (62-138)||(28326863-28326939)
chr7 (65-136)||(3632312-3632383)
chr7 (62-138)||(30385707-30385783)
chr7 (63-134)||(45235461-45235532)
chr7 (64-138)||(13439559-13439634)
[»] chr4 (5 HSPs)
chr4 (66-138)||(2630906-2630978)
chr4 (64-138)||(23874035-23874110)
chr4 (62-138)||(8487538-8487614)
chr4 (62-138)||(20673216-20673292)
chr4 (64-138)||(55298129-55298204)
[»] scaffold0287 (1 HSPs)
scaffold0287 (65-136)||(13702-13773)


Alignment Details
Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 25944429 - 25944515
Alignment:
Q  162 caaaacaaaattattctcccacttgccaagtacacatgtcatgcatttagtggaaggattgtcaaagtcacaaaaaagagtgacatttt 250  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25944429 caaaacagaattattctcccacttgccaagtaca--tgtcatgcatttagtggaaggattgtcaaagtcataaaaaagagtgacatttt 25944515  T

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Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 43627081 - 43627013
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcaca 130  Q
    ||||||||||||||| ||||||||| |||||||||||||||| ||||||  |||| | |||||||||||    
T  43627081 atgtttttctgttgttttttgtttgtaaccgttgtaactcttggtttttgtggtagtctctaaggcaca 43627013  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 26681464 - 26681388
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    ||||||||| ||||||| ||||||| |||||||||||||||| |||| | ||||| | |||||| |||| |||||||    
T  26681464 atgtttttcagttgtgtcttgtttgtaaccgttgtaactcttggtttctgaggtaatctctaagacacaccttgtgc 26681388  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 35694216 - 35694148
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcaca 130  Q
    ||||||||||| | ||| ||||||| |||||||||||||||| |||| | ||||| | |||||||||||    
T  35694216 atgtttttctgctatgtcttgtttgtaaccgttgtaactcttggtttctgaggtagtctctaaggcaca 35694148  T

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Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 31594137 - 31594091
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagttt 108  Q
    ||||||||||||||||| ||||| | |||||||||||||||| ||||    
T  31594137 atgtttttctgttgtgtcttgttagtaaccgttgtaactcttggttt 31594091  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 33547453 - 33547380
Alignment:
Q  64 gtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatct-aaggcacatcttgt 136  Q
    |||||||||||||||||||| || || ||||||||||||| |||| | ||||| | ||| |||||||| |||||    
T  33547453 gtttttctgttgtgttttgtatgtaatcgttgtaactcttggtttctgaggtagtctctaaaggcacaccttgt 33547380  T

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Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 5987147 - 5987223
Alignment:
Q  162 caaaacaaaattattctcccacttgccaagtacacatgtcatgcatttagtggaaggattgtcaaagtcacaaaaaa 238  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5987147 caaaacagaattattctcccacttgccaagtacacatgtcatgcatttggtggaaggattgtcaaagtcacaaaaaa 5987223  T

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Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 8873383 - 8873459
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||| | ||||| | ||||||||||| |||||||    
T  8873383 atgtttttcagttgtgtcttgtttgtaaccgttgtaactcttagtttctgaggtagtctctaaggcacaccttgtgc 8873459  T

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Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 13755045 - 13754973
Alignment:
Q  66 ttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    ||||||||||||||||||||| |||||||||||||||| |||| | ||||| | ||||||||| |||||||||    
T  13755045 ttttctgttgtgttttgtttgtaaccgttgtaactcttggtttctgaggtagtctctaaggcatatcttgtgc 13754973  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 15673408 - 15673332
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    ||||| ||||| ||||||||||||| || |||||||||||||  ||| | ||||| | ||||| ||||| |||||||    
T  15673408 atgttgttctggtgtgttttgtttgtaaacgttgtaactcttgatttctgaggtagtctctaacgcacaccttgtgc 15673332  T

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Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 22630519 - 22630611
Alignment:
Q  162 caaaacaaaattattctcccacttgccaagtacacatgtcatgcatttagt----ggaaggattgtcaaagtcacaaaaaagagtgacatttt 250  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||||||||||||| ||||||    
T  22630519 caaaacagaattattctcccacttgccaagtacacatgtcatgtatttagtggaaggaaggattgtcaaagtcacaaaaaagagtggcatttt 22630611  T

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Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 16421569 - 16421641
Alignment:
Q  66 ttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    ||||||||||||||||||||| |||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  16421569 ttttctgttgtgttttgtttgtaaccgttgtaactcttggtttctgaggtagtctctaaggcacatcttgtgc 16421641  T

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Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 2871774 - 2871699
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    |||||||||| |||| ||| ||||| ||||||||||||||||  |||||  |||| | |||||||||||||||||||    
T  2871774 atgtttttctattgt-tttggtttgtaaccgttgtaactcttgatttttgtggtagtctctaaggcacatcttgtgc 2871699  T

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Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 32353854 - 32353930
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||| ||||| | ||||||||||| |||||||    
T  32353854 atgtttttctgttgtgttttgtttgtaaccgttgtaactcttggtttttgaggtagtctctaaggcacaccttgtgc 32353930  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 38231270 - 38231194
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    ||||||| ||| ||||||||||||| |||||||||||||||| |||| | | ||  | ||||||||||| |||||||    
T  38231270 atgttttcctggtgtgttttgtttgtaaccgttgtaactcttggtttctgatgttgtctctaaggcacaccttgtgc 38231194  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 48073991 - 48074066
Alignment:
Q  64 gtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatct-aaggcacatcttgtgc 138  Q
    |||||||||||||||||||| || || ||||||||||||| |||| | ||||| | ||| |||||||| |||||||    
T  48073991 gtttttctgttgtgttttgtatgtaatcgttgtaactcttggtttctgaggtagtctctaaaggcacaccttgtgc 48074066  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 37530147 - 37530101
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagttt 108  Q
    ||||||||||||||| | || |||| |||||||||||||||||||||    
T  37530147 atgtttttctgttgtatcttatttgtaaccgttgtaactcttagttt 37530101  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 3692207 - 3692140
Alignment:
Q  66 ttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatctt 134  Q
    |||| |||||||||||||||| ||||||||||| ||||| ||| | || || | |||||||||||||||    
T  3692207 ttttatgttgtgttttgtttgtaaccgttgtaa-tcttaatttctgagatagtctctaaggcacatctt 3692140  T

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Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 163 - 242
Target Start/End: Complemental strand, 19353926 - 19353847
Alignment:
Q  163 aaaacaaaattattctcccacttgccaagtacacatgtcatgcatttagtggaaggattgtcaaagtcacaaaaaagagt 242  Q
    |||||| ||||||||||| | |||  ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  19353926 aaaacagaattattctcctatttgtaaagtacatatgtcatgtatttagtggaaggattgtcaaagtcacaaaaaagagt 19353847  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 34858252 - 34858327
Alignment:
Q  64 gtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatct-aaggcacatcttgtgc 138  Q
    |||||||||||||||||||| || || ||||||||||||| |||| | ||||| | ||| |||||||| |||||||    
T  34858252 gtttttctgttgtgttttgtatgtaatcgttgtaactcttggtttctgaggtagtctctaaaggcacaccttgtgc 34858327  T

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Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 29308987 - 29308915
Alignment:
Q  66 ttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    ||||||||||||||||||||| |||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  29308987 ttttctgttgtgttttgtttgtaaccgttgtaactcttggtttctgaggtagtctctaaggcacatcttgtgc 29308915  T

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Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 23601356 - 23601280
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||| | ||||| | ||||||||||| |||||||    
T  23601356 atgtttttatgttgtgttttgtttgtaaccgttgtaactcttggtttctgaggtagtctctaaggcacaccttgtgc 23601280  T

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Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 6177035 - 6177112
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgca 139  Q
    ||||||||||| ||||||||||||| ||  |||||||||||| |||| | ||||| | ||||||||||||||||||||    
T  6177035 atgtttttctggtgtgttttgtttgtaattgttgtaactcttggtttctgaggtagtctctaaggcacatcttgtgca 6177112  T

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Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 2814057 - 2814160
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc-------actatcctatttcgta 154  Q
    ||||||||||  ||||||||||||| |||||||||||||||| |||| | ||||| | |||||| |||| |||||||       ||||||||||||||||    
T  2814057 atgtttttctagtgtgttttgtttgtaaccgttgtaactcttggtttctgaggtagtctctaagacacaccttgtgcgtttgggactatcctatttcgta 2814156  T
Q  155 tata 158  Q
    ||||    
T  2814157 tata 2814160  T

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Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 26530792 - 26530734
Alignment:
Q  180 ccacttgccaagtacacatgtcatgcatttagtggaaggattgtcaaagtcacaaaaaa 238  Q
    |||||| ||||| |||| ||||||||||||||||||||| ||| |||| ||||||||||    
T  26530792 ccacttcccaaggacacgtgtcatgcatttagtggaagggttgacaaattcacaaaaaa 26530734  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 6517930 - 6518006
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    |||||||  |||||| |||||| || ||||||||||| ||||  ||||| ||||| | ||||||||||| |||||||    
T  6517930 atgttttcttgttgtattttgtgtgtaaccgttgtaattcttgatttttgaggtagtctctaaggcacaccttgtgc 6518006  T

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Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 28326939 - 28326863
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  28326939 atgtttttctgttgttttttgtttgtaaccgttgtaactcttggtttctgtggtagtctctaaggcacaccttgtgc 28326863  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 3632383 - 3632312
Alignment:
Q  65 tttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgt 136  Q
    |||||||| ||||||||||||| ||  ||||||||||||||||||| ||||| | ||||||||||| |||||    
T  3632383 tttttctggtgtgttttgtttgtaattgttgtaactcttagtttttgaggtagtctctaaggcacaccttgt 3632312  T

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Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 30385783 - 30385707
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    ||||||||||| ||||| ||||||| |||||||||||||||| |||| | | ||| | ||||||||||| |||||||    
T  30385783 atgtttttctggtgtgtcttgtttgtaaccgttgtaactcttggtttctgatgtagtctctaaggcacaccttgtgc 30385707  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 45235532 - 45235461
Alignment:
Q  63 tgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatctt 134  Q
    |||||||||| ||||| ||||||| ||||||||||||||||| ||| | ||||| | |||||| ||||||||    
T  45235532 tgtttttctgctgtgtcttgtttgtaaccgttgtaactcttaatttctgaggtagtctctaagacacatctt 45235461  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 13439634 - 13439559
Alignment:
Q  64 gtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatct-aaggcacatcttgtgc 138  Q
    |||||||||||||||||||| || || ||||||||||||| |||| | ||||| | ||| |||||||| |||||||    
T  13439634 gtttttctgttgtgttttgtatgtaatcgttgtaactcttggtttctgaggtagtctctaaaggcacaccttgtgc 13439559  T

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Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 2630978 - 2630906
Alignment:
Q  66 ttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    ||||||||||||||||||||| |||||||||||||||| |||| | ||||| | |||  ||||||||||||||    
T  2630978 ttttctgttgtgttttgtttgtaaccgttgtaactcttggtttatgaggtagtctcttcggcacatcttgtgc 2630906  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 23874035 - 23874110
Alignment:
Q  64 gtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatct-aaggcacatcttgtgc 138  Q
    |||||||||||||||||||| || |||||||||||||||| |||| | ||||| | ||| |||||||| |||||||    
T  23874035 gtttttctgttgtgttttgtatgtaaccgttgtaactcttggtttctgaggtagtctctaaaggcacaccttgtgc 23874110  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 8487538 - 8487614
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    ||||||||||| ||||||||||||| ||  ||| |||||||| |||| | ||||| | ||| |||||||||||||||    
T  8487538 atgtttttctggtgtgttttgtttgtaattgttataactcttggtttctgaggtagtctcttaggcacatcttgtgc 8487614  T

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Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 20673292 - 20673216
Alignment:
Q  62 atgtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgtgc 138  Q
    |||||||| |||||||||||||||| || ||||||||||||| |||  | ||||| | ||| ||||||| |||||||    
T  20673292 atgtttttatgttgtgttttgtttgtaatcgttgtaactcttggttcctgaggtagtctcttaggcacaccttgtgc 20673216  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 55298204 - 55298129
Alignment:
Q  64 gtttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatct-aaggcacatcttgtgc 138  Q
    |||||||||||||||||||| || || ||||||||||||| |||| | ||||| | ||| |||||||| |||||||    
T  55298204 gtttttctgttgtgttttgtatgtaatcgttgtaactcttggtttctgaggtagtctctaaaggcacaccttgtgc 55298129  T

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Target: scaffold0287 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 13702 - 13773
Alignment:
Q  65 tttttctgttgtgttttgtttgaaaccgttgtaactcttagtttttaaggtattatctaaggcacatcttgt 136  Q
    |||||||| ||||||||||||| ||  ||||||||||||||||||| ||||| | ||||||||||| |||||    
T  13702 tttttctggtgtgttttgtttgtaattgttgtaactcttagtttttgaggtagtctctaaggcacaccttgt 13773  T

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