View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_low_146 (Length: 251)
Name: NF17763_low_146
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_low_146 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 49978887 - 49978671
Alignment:
| Q |
20 |
acctccacctgccacatattgctgcccattgttactcatcatatgactcacatgacggtaatcgtgaggaaccaaatgtggagggaaagacataggcctt |
119 |
Q |
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| T |
49978887 |
acctccacctgccacatattgctgcccattgttactcatcatatgactcacatgacggtaatcgtgaggaaccaaatgtggagggaaagacataggcctt |
49978788 |
T |
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| Q |
120 |
gatggtgaagagtacagatattgttgaacttgagatgttgaggatgatgaacctgcagcagagaaggatgttgggaaactcaatggcattgttgggtgat |
219 |
Q |
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| T |
49978787 |
gatggtgaagagtacagatattgttgaacttgagatgttgaggatgatgaacctgcagcagagaaggatgttgggaaactcaatggcattgttgggtgat |
49978688 |
T |
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| Q |
220 |
gatgatgatctcctatg |
236 |
Q |
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| T |
49978687 |
gatgatgatctcctatg |
49978671 |
T |
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