View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_low_147 (Length: 250)
Name: NF17763_low_147
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_low_147 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 33789860 - 33790100
Alignment:
| Q |
1 |
actgacacgtcttggacaccagacatgacttaaatgtgaattgttgatgctacatagattgcaaccatcattcatgaaagaagagtgatgttcatggtga |
100 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
33789860 |
actgacacatcttggacaccagacatgacttaaatgtgaattgtcgatgctacatagattgcaaccatcgttcatgaaagaagagtgatgttcatggtga |
33789959 |
T |
|
| Q |
101 |
atactttagtttgtctaatggataataacccaggtctactttgcatactggacagtgatttagcctctcatctataaacttcctttctatacattccctg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33789960 |
atactttagtttgtctaatggataataacccaggtctactttgcatactggacagtgatttagcctctcatctataaacttcctttctatacattccctg |
33790059 |
T |
|
| Q |
201 |
caaactgttaccaaactcagagatttaggcatatattcatc |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
33790060 |
caaactgttaccaaactcagagatttaggcatatattcatc |
33790100 |
T |
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