View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_low_34 (Length: 501)
Name: NF17763_low_34
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_low_34 |
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Alignment Details
Target: chr8 (Bit Score: 409; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 13 - 487
Target Start/End: Complemental strand, 32793334 - 32792854
Alignment:
| Q |
13 |
agcacagaaaatgaagtctaattgacaagtcttttgaacattaattgagttagattggtttgatggtattgacttgagatttgaaagtgtattcctccta |
112 |
Q |
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| T |
32793334 |
agcacagaaaatgaagtttaattgacaagtcttttgaacattaattgagttagattggtttgatggtactgacttgagatctgaaagtgtgctcctccta |
32793235 |
T |
|
| Q |
113 |
attgattttgtagtccacagaaacactaggggcgtgagaaggaaaaaaccaatttta----taaggaaccttttgtataatttcaagtaggatgagataa |
208 |
Q |
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|||||||||||||| || ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |
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| T |
32793234 |
attgattttgtagttcatagaaacactaggggcatgagaaggaaaaaaccaattttaattatgaggaaccttttgtataatttcaagtaggatgagataa |
32793135 |
T |
|
| Q |
209 |
gacaaggaactttaaatgtgatggtaattgaaacgtagagctagtggttggttgggcaatgtttgcaatacaagatcattaagattgtaatgcaactgga |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
32793134 |
gacaaggaactttaaatgtgatggtaattgaaacgtagagctagtggttggttgggcaatgtttgcaatacaagatcgttaagattgtaatgcaactggc |
32793035 |
T |
|
| Q |
309 |
at--gtgcatgaactcaatcaatcttggagtatcaccttgagaataagactgtgatagagacgcattattccagtatttaaacttgaagccgaataacta |
406 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32793034 |
atatgtgcatgaactcaatcaatcttggagtatcaccttgagaataagactgtgatagagacgcattattccagtatttaaacttgaagccgaataacta |
32792935 |
T |
|
| Q |
407 |
tctcgaatagatgtcatcataaaggcagagccatatctaagtgggtgggaattaatgggctccactttggtgaaatggttg |
487 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32792934 |
tctcgaatagatgtcatcataaaggcagagccatatctaagtgggtgggaattaatgggctccactttggtgaaatggttg |
32792854 |
T |
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