View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17763_low_44 (Length: 453)
Name: NF17763_low_44
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_low_44 |
 | |
|
| [»] scaffold0596 (1 HSPs) |
| | |
|
| [»] scaffold0035 (1 HSPs) |
| | |
|
| [»] scaffold0045 (1 HSPs) |
| | |
|
| [»] scaffold0096 (1 HSPs) |
| | |
|
| [»] scaffold0157 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 331; Significance: 0; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 15 - 434
Target Start/End: Complemental strand, 43071503 - 43071081
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43071503 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
43071404 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
43071403 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
43071304 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43071303 |
aattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttct |
43071204 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
43071203 |
ttatgtgttggaattcagattgcttttactcaaaaaaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctc |
43071104 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
43071103 |
tgccgttgccgctctctccgtcg |
43071081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 15 - 434
Target Start/End: Original strand, 1262088 - 1262511
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
1262088 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacaagggaagccgttggatctca |
1262187 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
1262188 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
1262287 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca--ttttaagttctcttctctcctctcccattattccttc |
310 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1262288 |
aattatcctccaattcccaaattgactccacacttatcgatgttcacctctttctccttcattttttaagttctcttctctcctctcccattattccttc |
1262387 |
T |
|
| Q |
311 |
tttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcg |
410 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
1262388 |
tttatgtgttggaattcatattgcttttactcgaaaaaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattct |
1262487 |
T |
|
| Q |
411 |
ctgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
||| |||||||||| ||||||||| |
|
|
| T |
1262488 |
ctgccgttgccgctttctccgtcg |
1262511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 15 - 338
Target Start/End: Complemental strand, 48849928 - 48849601
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
48849928 |
atcatacttatatctaatctttgttaacattgctaatgactttgtaaatcctaaacctaaatggttttggctccaaaacaagggattttgttggatctca |
48849829 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
48849828 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
48849729 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca--ttttaagttctcttctctcctctcccattattccttc |
310 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
48849728 |
aattatcctcaaattcccaaattgactccacacttatcgatgttcacctctttctccttcattttttaagttctcttctctcatctcccattattccttc |
48849629 |
T |
|
| Q |
311 |
tttatgtgttggaattcagattgctttt |
338 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
48849628 |
tttatgtgttggaattcagattgctttt |
48849601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 15 - 311
Target Start/End: Complemental strand, 26910102 - 26909806
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | |||||||| |||||| ||||||| ||||||||||||||||||||| || |||||||| | |
|
|
| T |
26910102 |
atcatacttatatctaatctttgttaacattgctaataactttgcaaaccctaaacctaaatggatttggctccaaaacaagggagaccattggatctta |
26910003 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||| |
|
|
| T |
26910002 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttattcaagttttgactc--- |
26909906 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt--aagttctcttctctcctctcccattattccttc |
310 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||| ||| |||||| ||||||||||||||| | |||||||| |||||||||||||||||||||| |
|
|
| T |
26909905 |
-attatcctccaattcccagattgactccacacttatccatgcccacctttttctccttcatttttaacgttctcttttctcctctcccattattccttc |
26909807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 48849565 - 48849481
Alignment:
| Q |
350 |
tctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgctgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||||||| |
|
|
| T |
48849565 |
tctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgccgttgccgctttctccgtcg |
48849481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 22007347 - 22007416
Alignment:
| Q |
22 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
91 |
Q |
| |
|
||||||||||| |||||||||||||||||||| || ||||| ||||| |||||||||||||||||||| |
|
|
| T |
22007347 |
ttatatctaatttttgttaacattgctaatgactttacaaaccctaaatctaaatggttttggctccaaa |
22007416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 331; Significance: 0; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 15 - 434
Target Start/End: Complemental strand, 23349101 - 23348679
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23349101 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
23349002 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
23349001 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
23348902 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23348901 |
aattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttct |
23348802 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
23348801 |
ttatgtgttggaattcagattgcttttactcaaaaaaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctc |
23348702 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
23348701 |
tgccgttgccgctctctccgtcg |
23348679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 15 - 434
Target Start/End: Complemental strand, 18355434 - 18355012
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
18355434 |
atcatacttatatttaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggtcgttggatctca |
18355335 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
18355334 |
tcatttggctaagcatgcatctcatcctttaatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
18355235 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18355234 |
aattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttct |
18355135 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||| | |
|
|
| T |
18355134 |
ttatgtgttggaattcagattgcttttactcaaaaaaatctcttcgccctttgagttgttcatcttccatctcactctcagacattcaaacaaaattctc |
18355035 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
18355034 |
tgccgttgccgctctctccgtcg |
18355012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 26 - 431
Target Start/End: Original strand, 12741699 - 12742107
Alignment:
| Q |
26 |
atctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcatttggcta |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12741699 |
atctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaaaggaggccgttggatctcatcatttggcta |
12741798 |
T |
|
| Q |
126 |
accatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcattaattatcctcc |
223 |
Q |
| |
|
| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12741799 |
agcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctcc |
12741898 |
T |
|
| Q |
224 |
aattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttctttatgtgttgg |
322 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12741899 |
aattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttgg |
12741998 |
T |
|
| Q |
323 |
aattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgctgtcgttgccg |
422 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||||||| |
|
|
| T |
12741999 |
aattcagattgcttttactcaaaaaaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgccgttgccg |
12742098 |
T |
|
| Q |
423 |
ctctctccg |
431 |
Q |
| |
|
||||||||| |
|
|
| T |
12742099 |
ctctctccg |
12742107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 15 - 404
Target Start/End: Complemental strand, 10329013 - 10328626
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| || |||||||||||||||||||||||||| |
|
|
| T |
10329013 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaattgttttggttctaaaacaagggaggccgttggatctca |
10328914 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcattt-gatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcat |
211 |
Q |
| |
|
|||||||||||| ||||||||||||| ||| ||||||||| ||||||||||| ||||||||| |||||| ||||||||||| ||||||||||| |
|
|
| T |
10328913 |
tcatttggctaagcatgcatctcatccttttgatctaatctgagtcaaatttgaaaatttgat------ttcctatgcacttatccaagttttgactcat |
10328820 |
T |
|
| Q |
212 |
taattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttc |
310 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10328819 |
taattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttc |
10328720 |
T |
|
| Q |
311 |
tttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaa |
404 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
10328719 |
tttatgtgttggaatttagattgcttttactcaaaaaaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaa |
10328626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 1616035 - 1615863
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| |||||| ||| || | |||| ||||||||||| |||||||| |||||||| ||||||||| || |
|
|
| T |
1616035 |
atcatccttatatccaatctttgttaacattgttaatgactttgtaaccattaaatctaaatggtttttgctccaaa-caagggagatcgttggatcgca |
1615937 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta |
188 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
1615936 |
tcatttggctaagcatgcatctcatcctttgatctaatttgagtcaaactttcaaatttgatgtatatttccta |
1615863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 24454516 - 24454688
Alignment:
| Q |
16 |
tcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcat |
115 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |||||||| |||||| ||||| ||| ||| ||||| ||||| |||||||||||||||| |
|
|
| T |
24454516 |
tcatacttatatctaatcttaattaacattgctaagaccattgcaaatcctaaacctaaattttttaggcgccaaa-caaggagggccgttggatctcat |
24454614 |
T |
|
| Q |
116 |
catttggctaaccatgcatctcatcatttgatctaatccga-gtcaaattttcaaatttgatgtatatttccta |
188 |
Q |
| |
|
||||||||| ||| ||||||||| |||||||||||| || ||||| ||||||||||||||| | ||||||| |
|
|
| T |
24454615 |
catttggcttgacattcatctcatcctttgatctaatctgacttcaaactttcaaatttgatgtctttttccta |
24454688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 319; Significance: 1e-180; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 15 - 434
Target Start/End: Original strand, 9043802 - 9044224
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9043802 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
9043901 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||| |
|
|
| T |
9043902 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaatttttaaatttgatgtatatttcctatgcatttatccaagttttgactcatt |
9044001 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9044002 |
aattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttct |
9044101 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
||||||||||||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
9044102 |
ttatgtgttggaattcagattgcttttactcaaaaaaatttcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctc |
9044201 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
9044202 |
tgccgttgccgctctctccgtcg |
9044224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 15 - 434
Target Start/End: Complemental strand, 7473610 - 7473188
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7473610 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
7473511 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||| ||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
7473510 |
tcatttagctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
7473411 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7473410 |
agttatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttct |
7473311 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
||||||||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
7473310 |
ttatgtgttggaatttagattgcttttactcaaaaaaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctc |
7473211 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
|| ||||| |||||||||||||| |
|
|
| T |
7473210 |
tgccgttgtcgctctctccgtcg |
7473188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 16 - 432
Target Start/End: Complemental strand, 30442667 - 30442247
Alignment:
| Q |
16 |
tcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcat |
115 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30442667 |
tcatgcttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcat |
30442568 |
T |
|
| Q |
116 |
catttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatta |
213 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
30442567 |
catttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttttccaagttttgactcatta |
30442468 |
T |
|
| Q |
214 |
attatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt-aagttctcttctctcctctcccattattccttctt |
312 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| |
|
|
| T |
30442467 |
attatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcattttaaagttctcttctctccactctcattattccttctt |
30442368 |
T |
|
| Q |
313 |
tatgtgttggaattcagattgctttttctc-nnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
30442367 |
tatgtgttggaattcagattgcttttactcaaaaaaaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctc |
30442268 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgt |
432 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
30442267 |
tgtcgttgccgctctctccgt |
30442247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 15 - 314
Target Start/End: Complemental strand, 22009649 - 22009359
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22009649 |
atcatacttatatctaatctttgttaacattgctaatgaatttgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
22009550 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| | ||||||||| |||||| |
|
|
| T |
22009549 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgctcttatccaagttttga------ |
22009456 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt--aagttctcttctctcctctcccattattccttc |
310 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||| | |||| |||||||||| |||| | |||| ||||||||||||||||||||||||| |
|
|
| T |
22009455 |
-------ctccaattcccaaattgactccacacttatcgatgccaacctttttctccttccttttcaactttctgttctctcctctcccattattccttc |
22009363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 26841074 - 26840988
Alignment:
| Q |
26 |
atctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatct |
112 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26841074 |
atctaatctttgttaacattgctaatgattttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatct |
26840988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 19085499 - 19085422
Alignment:
| Q |
14 |
catcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
91 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |
|
|
| T |
19085499 |
catcatacttatatataatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaa |
19085422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 22004571 - 22004441
Alignment:
| Q |
21 |
cttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcattt |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| |||||| || || |||| ||| || || ||||| | ||||||||||||||||||| |
|
|
| T |
22004571 |
cttatatctaatctttgttaacattgctaatgattttgcaaaccctaaacctagatagtttaggcgcc-aatcaaggtggtccgttggatctcatcattt |
22004473 |
T |
|
| Q |
121 |
ggctaaccatgcatctcatcatttgatctaat |
152 |
Q |
| |
|
|||| | ||| ||| ||||| ||||||||||| |
|
|
| T |
22004472 |
ggctcagcattcatatcatcctttgatctaat |
22004441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 277
Target Start/End: Complemental strand, 19085241 - 19085182
Alignment:
| Q |
218 |
tcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
277 |
Q |
| |
|
|||||||||||| | |||||||||||||||||| || ||||||||||||||| |||||| |
|
|
| T |
19085241 |
tcctccaattcccatattgactccacacttatcgatacccacctctttctcctccatttt |
19085182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 30463172 - 30463136
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaat |
51 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30463172 |
atcatacttatatctaatctttgttaacaatgctaat |
30463136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 315; Significance: 1e-177; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 22 - 433
Target Start/End: Complemental strand, 19882225 - 19881811
Alignment:
| Q |
22 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19882225 |
ttatatctaatctttgttaacattgctaatgaaattgtaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttg |
19882126 |
T |
|
| Q |
122 |
gctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcattaattatc |
219 |
Q |
| |
|
||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
19882125 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcattaattatc |
19882026 |
T |
|
| Q |
220 |
ctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttctttatgtg |
318 |
Q |
| |
|
|||||||||| |||||||||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
19882025 |
ctccaattcccaaattgactccacatttatcgatgtccacctctttctccttcatttttaagttatcttctctcctctcccattattccttctttatgtg |
19881926 |
T |
|
| Q |
319 |
ttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgctgtcgtt |
418 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
19881925 |
ttggaattcagattgcttttactcaaaaaaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgtcgtt |
19881826 |
T |
|
| Q |
419 |
gccgctctctccgtc |
433 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
19881825 |
gccgctctctccgtc |
19881811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 15 - 434
Target Start/End: Complemental strand, 53973407 - 53972985
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
53973407 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaatcaagggaggccgttggatctca |
53973308 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
53973307 |
tcatttggctaagcctgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcatt |
53973208 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
53973207 |
aattatcctccaattctcaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttttcttctctcctctcccattattcattct |
53973108 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||| | ||||||||| | |
|
|
| T |
53973107 |
ttatgtgttggaattcagattgcttttactcaaaaaaatctcttctccctttgagttgttcatcttccacctcactctcagacatttaaacaaaattctc |
53973008 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
53973007 |
tgtcgttgccgctctctccgtcg |
53972985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 15 - 434
Target Start/End: Original strand, 37982349 - 37982774
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37982349 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctca |
37982448 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cac---ttatccaaattttgactc |
209 |
Q |
| |
|
|||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||| |
|
|
| T |
37982449 |
tcatttggctaagcatgcatctcatcctttaatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacgtcttatccaagttttgactc |
37982548 |
T |
|
| Q |
210 |
attaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattcct |
308 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
37982549 |
attaattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattcct |
37982648 |
T |
|
| Q |
309 |
tctttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaatt |
408 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
37982649 |
tctttatgttttggaattcagattgcttttactcaaaaaaatctcttcgccctctgagttgttcatcttccacctcactctcagacattcaaacaaaatt |
37982748 |
T |
|
| Q |
409 |
cgctgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
| |||||||||||||||||||||||| |
|
|
| T |
37982749 |
ctctgtcgttgccgctctctccgtcg |
37982774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 15 - 408
Target Start/End: Original strand, 31685077 - 31685474
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
31685077 |
atcatacttatatctaatctttattaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaataagggaggccgttgaatctca |
31685176 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||| |||||||||||| |
|
|
| T |
31685177 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttattcaagttttgactcatt |
31685276 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
31685277 |
aattatcctccaattctcaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttcttttctctcctcttccattattccttct |
31685376 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctc-nnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaatt |
408 |
Q |
| |
|
||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
31685377 |
ttatgtgttggaattcaaattgcttttactcaaaaaaaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaatt |
31685474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 17681764 - 17681938
Alignment:
| Q |
12 |
atcatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatc |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
17681764 |
atcatcatacttatatctaatctttgttaacattgttaatgattttgcaaaccctaaacctaaatggttttggctcc-aaacaaggggggccgttggatc |
17681862 |
T |
|
| Q |
112 |
tcatcatttggctaaccatgcatctcatcatttgatctaatc-cgagtcaaattttcaaatttgatgtatatttcc |
186 |
Q |
| |
|
||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||| |||||| |||||||||||| |
|
|
| T |
17681863 |
tcatcatttggttaagcatgcatctcatcctttgatctaatcttgagtcaaatttttaaatttaatgtatatttcc |
17681938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 12538756 - 12538620
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
12538756 |
atcatacttatatctaatctttgttaacctttctaatgattttgcaaaccctaaacctaaatggttttggctcc-aaacaagggaggccgttggatctca |
12538658 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaat |
152 |
Q |
| |
|
|||||||||||| |||||||| |||| ||||||||||| |
|
|
| T |
12538657 |
tcatttggctaagcatgcatcacatcctttgatctaat |
12538620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 2549937 - 2550079
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |||||||| |||||| |||||| |||||||||||||||||||||||||||||||||| | |
|
|
| T |
2549937 |
atcatacttatatctaatcttaattaacattgctaatgactttgcaaaccctaaacctaaatgattttggctccaaaacaagggaggccgttggatct-a |
2550035 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagt |
158 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||| ||||| |||| |
|
|
| T |
2550036 |
tcatttggctaagcatgcatctcatcctttgatttaatctgagt |
2550079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 24762019 - 24761882
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| | | ||||||||||||| |
|
|
| T |
24762019 |
atcatacttatatctaatccttcttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacaatgctgaccgttggatctca |
24761920 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaat |
152 |
Q |
| |
|
|||||||||| | ||||||||||||| ||||||||||| |
|
|
| T |
24761919 |
tcatttggctcagcatgcatctcatcctttgatctaat |
24761882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 15 - 152
Target Start/End: Original strand, 24815915 - 24816052
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||| |||||||| |||||| |||||||||||||||||||||| | | ||||||||||||||| |
|
|
| T |
24815915 |
atcatacttatatctaatccttcttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacgatgctggccgttggatctca |
24816014 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaat |
152 |
Q |
| |
|
|||||||||| | ||||||||||||| ||||||||||| |
|
|
| T |
24816015 |
tcatttggctcagcatgcatctcatcctttgatctaat |
24816052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 53352882 - 53352745
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||| ||||||||||||||| |||| ||||||||||||||||| | | | ||||||||||||| |
|
|
| T |
53352882 |
atcatacttatatctaatccttcttaacattgctaatgactttgcaaactctaaacctaaacggttttggctccaaaacgatgctgaccgttggatctca |
53352783 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaat |
152 |
Q |
| |
|
|||||||||| | ||||||||||| |||||| |||| |
|
|
| T |
53352782 |
tcatttggctcagtgtgcatctcatcctttgatttaat |
53352745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 53027873 - 53027736
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||| || |||||| ||||||| | || ||||| |||||| |||||||||||| |||||||| | | | ||||||||||||| |
|
|
| T |
53027873 |
atcatacttatatctaatccttcttaacactgctaataactttacaaaccctaaacctaaatggttttgactccaaaatgatgctgaccgttggatctca |
53027774 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaat |
152 |
Q |
| |
|
|||||||||| | ||||||||||||| ||||||||||| |
|
|
| T |
53027773 |
tcatttggctcagcatgcatctcatcctttgatctaat |
53027736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 43
Target Start/End: Complemental strand, 32015812 - 32015784
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaaca |
43 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
32015812 |
atcatacttatatctaatctttgttaaca |
32015784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0596 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: scaffold0596
Description:
Target: scaffold0596; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 15 - 434
Target Start/End: Original strand, 654 - 1076
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
654 |
atcatacttatatctgatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttgactccaaaataagggaggccgttggatctca |
753 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
754 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcatt |
853 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
||||||| | ||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
854 |
aattatcattcaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttct |
953 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
||||||||||||||||| ||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||| | ||||||||| | |
|
|
| T |
954 |
ttatgtgttggaattcaaattgcttttactcaaaaaaatctcttctccctttgagttgttcatcttccacctcactctcagacatttaaacaaaattctc |
1053 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
1054 |
tgccgttgccgctctctccgtcg |
1076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 15 - 434
Target Start/End: Complemental strand, 14678142 - 14677721
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14678142 |
atcatacttatatctaatctttgttaacattgctaatgactttgaaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
14678043 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
14678042 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttaatgtatatttcctatgcacttatccaagttttgactcatt |
14677943 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677942 |
aattatcatccaattcccaaattgactccacacttatc-atgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttct |
14677844 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
|||||||||| |||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| | | |
|
|
| T |
14677843 |
ttatgtgttgaaattcagattgcttttactcaaaaaaatctctttcccctttgagttgttcatcttccacctcactctcagacattcaaacaaaatcctc |
14677744 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
14677743 |
tgccgttgccgctctctccgtcg |
14677721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 15 - 434
Target Start/End: Complemental strand, 31100993 - 31100571
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
31100993 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaatcctaaacctaaatggttttggctccaaaacaagggaggccgttcgatctca |
31100894 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||| ||| |||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
31100893 |
tcatttggttaagcatgtatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
31100794 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31100793 |
aattatcctccaattcccaaattgactccacacttatcgatgcccacctctttctccttcatttttaagttctcttctctcctctcccattattccttct |
31100694 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
31100693 |
ttatgtgttggaattcagattgcttttactcaaaaaaatctcttccccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctt |
31100594 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
|| ||| ||| |||||||||||| |
|
|
| T |
31100593 |
tgccgtcgccactctctccgtcg |
31100571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 15 - 409
Target Start/End: Original strand, 5657771 - 5658168
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5657771 |
atcatacttatatctaatctttgttaacgttgctaatgactttgcaaaccctaaacctaaatagttttggctccaaaacaagggaggccgttggatctca |
5657870 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||| ||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
5657871 |
tcatttggttaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
5657970 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5657971 |
aattatcctccaattcccaaattgactccacacttatcgatgcccacctctttctccttcatttttaagttctcttctctcctctcccattattccttct |
5658070 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattc |
409 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5658071 |
ttatgtgttggaattcagattgcttttactcaaaaaaatctcttccccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattc |
5658168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 27541682 - 27541507
Alignment:
| Q |
12 |
atcatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatc |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||| ||||||| ||||||||||| |
|
|
| T |
27541682 |
atcatcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggctttggctccaaa-caagggacgccgttggatc |
27541584 |
T |
|
| Q |
112 |
tcatcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta |
188 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||| |
|
|
| T |
27541583 |
tcatcatttggctaagcatgcatctcatcctttgatctaatctgaatcaaactttcaaatttgatgtatatttccta |
27541507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 218 - 404
Target Start/End: Complemental strand, 33689215 - 33689028
Alignment:
| Q |
218 |
tcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatt-ttaa-gttctcttctctcctctcccattattccttctttat |
315 |
Q |
| |
|
|||||||||| | | |||||||||||||||||| || |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
33689215 |
tcctccaatttccatattgactccacacttatccatacccacctctttctccttcattgttaacgttctcttctctcctctcccattattccttctttac |
33689116 |
T |
|
| Q |
316 |
gtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaa |
404 |
Q |
| |
|
| |||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||| |||| |
|
|
| T |
33689115 |
tttttggaattcagattgcttttactcaaaaaaatctcttc-ccctttgagttgttcatcttccacctcactcttagacattcaaacaa |
33689028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 23738653 - 23738731
Alignment:
| Q |
11 |
catcatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaa |
90 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| | |||| | |||||||||||| |
|
|
| T |
23738653 |
catcatcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaccctaaa-gtttttggctccaa |
23738731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 24788154 - 24788079
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaa |
90 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||| | |||||||| |||| |
|
|
| T |
24788154 |
atcatacttatatctaatcttaattaacattgctaatgactttgcaaaccctaaacctaattagttttggcgccaa |
24788079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 33689415 - 33689343
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctcc |
88 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| ||||| || |||| |||||| | |||||||||| |
|
|
| T |
33689415 |
atcatacctatatctaatctttgttaacattgctaatgactttgcagaccctaaccttaaa-gtttttggctcc |
33689343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 8158461 - 8158497
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaat |
51 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
8158461 |
atcatacttatatctaatttttgttaacaatgctaat |
8158497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 285; Significance: 1e-159; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 13 - 434
Target Start/End: Complemental strand, 29863484 - 29863060
Alignment:
| Q |
13 |
tcatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatct |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29863484 |
tcatcatacttatatctaatctttgttaacattgctcatgactttgcaaaccgtaaacctaaatggttttggctccaaaacaagggaggccgttggatct |
29863385 |
T |
|
| Q |
113 |
catcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactca |
210 |
Q |
| |
|
|||||||||||| | ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||| || ||||||||||| |||||||||| |
|
|
| T |
29863384 |
catcatttggctgagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcttatgcacttatccaagttttgactca |
29863285 |
T |
|
| Q |
211 |
ttaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattcctt |
309 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
29863284 |
ttaattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcattttttagttctcttatctcctctcccattattcctt |
29863185 |
T |
|
| Q |
310 |
ctttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattc |
409 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
29863184 |
ctttatgtgttagaattcagattgcttttactcaaaaaaatctctttcccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattc |
29863085 |
T |
|
| Q |
410 |
gctgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
|||||| ||||||||||||||||| |
|
|
| T |
29863084 |
tctgtcgctgccgctctctccgtcg |
29863060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 12506436 - 12506497
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaat |
76 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |
|
|
| T |
12506436 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaatcctaaacctaaat |
12506497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 277; Significance: 1e-155; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 22 - 423
Target Start/End: Complemental strand, 33045545 - 33045141
Alignment:
| Q |
22 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
33045545 |
ttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaataagggaggccgttggatctcatcatttg |
33045446 |
T |
|
| Q |
122 |
gctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcattaattatc |
219 |
Q |
| |
|
| ||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
33045445 |
gttaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
33045346 |
T |
|
| Q |
220 |
ctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttctttatgtg |
318 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
33045345 |
ctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctcttgtctcctctcccattattccttctttatgtg |
33045246 |
T |
|
| Q |
319 |
ttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgctgtcgtt |
418 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| |||||||||||||| |||||| |||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
33045245 |
ttggaattcagattgcttttactcaaaaaaatctcttccccctttgagttgttcatcttcaacctcactctcagacattcaaacaaaattctttgtcgtc |
33045146 |
T |
|
| Q |
419 |
gccgc |
423 |
Q |
| |
|
||||| |
|
|
| T |
33045145 |
gccgc |
33045141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 435
Target Start/End: Original strand, 10092512 - 10092914
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10092512 |
atcatacttatatctaatctttgttaacattgttaatgactttgcaaaccctaaatctaaatggttttggctccaaaacaagggaggccgttggatctca |
10092611 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||| ||| ||||||| |||||| ||||| |
|
|
| T |
10092612 |
tcatttggctaagcatgcatctcattcttt--------------caaactttcaaatttgatgtatatttcctatgcacctatccaagttttgattcatt |
10092697 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
| ||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
10092698 |
agttatcctccaatttccaaattgactccacacttatcgatgtccacctctttctccttcatttttaag-----ttctctcctctcccattattccttct |
10092792 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
||||||||||||||||| ||||||||| ||| |||||| |||||| ||||||| ||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
10092793 |
ttatgtgttggaattcaaattgcttttactcaaaaaaatctctt--ccctttaagttgttcatcttccacctcactctcagacattcaaacaaaattctc |
10092890 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgtcgt |
435 |
Q |
| |
|
| ||| ||||||||||| ||||| |
|
|
| T |
10092891 |
taacgtcgccgctctctctgtcgt |
10092914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 8976411 - 8976542
Alignment:
| Q |
22 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
121 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| || |||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| |||| |
|
|
| T |
8976411 |
ttatatctaatctttgttaatattgctaatgactttacaaactctaaacctaaatggttttggctccaaaataagggagaccgttggatctcattattta |
8976510 |
T |
|
| Q |
122 |
gctaaccatgcatctcatcatttgatctaatc |
153 |
Q |
| |
|
||||| ||||||||||||| |||||||||||| |
|
|
| T |
8976511 |
gctaaacatgcatctcatcctttgatctaatc |
8976542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 3065698 - 3065808
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
3065698 |
atcatacttatatctaatctttgttaacatggctaatgactttgcaaaccctaaacctaaatggttttggctcc-aaacaagggagaccgttggatctca |
3065796 |
T |
|
| Q |
115 |
tcatttggctaa |
126 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3065797 |
tcatttggctaa |
3065808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 22001096 - 22001012
Alignment:
| Q |
350 |
tctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgctgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
22001096 |
tctcttccccctttgagttgttcatcttccacctcactttcagacattcaaacaaaattctctgtcgttgccgctctctccgtcg |
22001012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 16246702 - 16246778
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
91 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||||||| |||| | |||||||||||||||||||| |
|
|
| T |
16246702 |
atcatacttatatctaatctttgtgaacattgctaatgactttgcaaaccctaatcctaaatggttttggctccaaa |
16246778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 30908483 - 30908414
Alignment:
| Q |
22 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
91 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
30908483 |
ttatatctaatctttgttaacattgctaatgactttgcaaaccctaaatctaaatggttttggctccaaa |
30908414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 4660295 - 4660222
Alignment:
| Q |
16 |
tcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaa |
90 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |||||||| |||| | |||| | |||||||||||| |
|
|
| T |
4660295 |
tcatacttatatataatctttgttaacattgctaatgactttgcaaaccctaaccctaaa-gtttttggctccaa |
4660222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 277
Target Start/End: Complemental strand, 30908233 - 30908174
Alignment:
| Q |
218 |
tcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
277 |
Q |
| |
|
||||||||||| | |||||||||||||||||| || ||||||||||||||| |||||| |
|
|
| T |
30908233 |
tcctccaattctcatattgactccacacttatcgatacccacctctttctcctccatttt |
30908174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 15 - 434
Target Start/End: Original strand, 35063 - 35483
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
35063 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacaagggaggttgttggatctca |
35162 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
35163 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
35262 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
35263 |
aattatcctccaattcccaaattaactccacacttatcgatgtccacctttttctccttcatttttaagttctc--ctctcctctcccattattccttct |
35360 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
||||| ||||||||||||||||||||| ||| || || |||||||||||||| ||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
35361 |
ttatgagttggaattcagattgcttttactcaaaaaaatcgttttcccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctc |
35460 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
|| |||||| ||||||||||||| |
|
|
| T |
35461 |
tgccgttgctgctctctccgtcg |
35483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 15 - 434
Target Start/End: Complemental strand, 11755 - 11333
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
11755 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaactggttttgactccaaaacaagggaggccgttggatctca |
11656 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
212 |
Q |
| |
|
|||||||| ||| ||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
11655 |
tcatttggttaagcatgcatctcatcctttgatttaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
11556 |
T |
|
| Q |
213 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctcttctctcctctcccattattccttct |
311 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11555 |
cattatcctccaattcccaaattgactccacacttattgatgcccacctctttctccttcatttttaagttctcttctctcctctcccattattccttct |
11456 |
T |
|
| Q |
312 |
ttatgtgttggaattcagattgctttttctcnnnnnnntctcttcgccctttgagttgtttatcttccacctcactctcagacattcatacaaaattcgc |
411 |
Q |
| |
|
||||||||||||||||||||||||||| ||| || |||| |||||||||||||| |||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
11455 |
ttatgtgttggaattcagattgcttttactcaaacaaatcccttccccctttgagttgttcatcttccacctcactcccagacattcaaacaaaattctt |
11356 |
T |
|
| Q |
412 |
tgtcgttgccgctctctccgtcg |
434 |
Q |
| |
|
||| || ||||||||||||||| |
|
|
| T |
11355 |
tgttgtcaccgctctctccgtcg |
11333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 15 - 152
Target Start/End: Original strand, 27410 - 27546
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27410 |
atcatacttatatctaatctttgttaacattgctaatgattttgcaaaccctaaacctaaatggttttggctcc-aaacaagggaggccgttggatctca |
27508 |
T |
|
| Q |
115 |
tcatttggctaaccatgcatctcatcatttgatctaat |
152 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
27509 |
tcatttggctaagcatgcatctcatcctttgatctaat |
27546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 50990911 - 50990983
Alignment:
| Q |
19 |
tacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
91 |
Q |
| |
|
|||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||||||||| |
|
|
| T |
50990911 |
tacttatatctaatctttgttaacattgctgataactttgcaaaccctaaacctaaatggttttggctccaaa |
50990983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 25223219 - 25223255
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaat |
51 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
25223219 |
atcatacttatatctaatctttgttaacaatgctaat |
25223255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0157 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0157
Description:
Target: scaffold0157; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 14041 - 13980
Alignment:
| Q |
15 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaat |
76 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |
|
|
| T |
14041 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaatcctaaacctaaat |
13980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 7585 - 7520
Alignment:
| Q |
24 |
atatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaa |
90 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||| |||| | |||| | |||||||||||| |
|
|
| T |
7585 |
atatataatctttgttaacattgctaatgactttgcaaaccctaaccctaaa-gtttttggctccaa |
7520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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