View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17763_low_65 (Length: 380)

Name: NF17763_low_65
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17763_low_65
NF17763_low_65
[»] chr7 (49 HSPs)
chr7 (20-367)||(29037579-29037929)
chr7 (222-362)||(18249994-18250137)
chr7 (20-108)||(29017715-29017803)
chr7 (282-364)||(7447875-7447957)
chr7 (271-367)||(10618917-10619013)
chr7 (221-356)||(33898944-33899082)
chr7 (221-367)||(33935504-33935653)
chr7 (221-367)||(49034224-49034373)
chr7 (221-358)||(46573612-46573752)
chr7 (286-361)||(26719817-26719892)
chr7 (221-358)||(17025361-17025501)
chr7 (221-358)||(18740218-18740358)
chr7 (233-358)||(21760595-21760723)
chr7 (250-363)||(32356961-32357077)
chr7 (221-362)||(35543556-35543697)
chr7 (221-367)||(44421901-44422051)
chr7 (281-360)||(36472442-36472521)
chr7 (263-365)||(17608710-17608812)
chr7 (221-358)||(33124700-33124840)
chr7 (271-367)||(22075059-22075155)
chr7 (221-367)||(222226-222375)
chr7 (272-367)||(45055724-45055819)
chr7 (272-367)||(45176241-45176336)
chr7 (221-358)||(23226999-23227139)
chr7 (221-358)||(23236152-23236292)
chr7 (250-363)||(31491815-31491931)
chr7 (281-350)||(48634460-48634529)
chr7 (272-367)||(11595850-11595945)
chr7 (217-367)||(37334274-37334427)
chr7 (222-367)||(36926995-36927143)
chr7 (281-367)||(48505851-48505937)
chr7 (286-367)||(37239829-37239910)
chr7 (272-367)||(40480104-40480200)
chr7 (221-367)||(5776130-5776279)
chr7 (221-367)||(5794936-5795085)
chr7 (221-358)||(33171534-33171674)
chr7 (220-365)||(37401565-37401713)
chr7 (274-365)||(2466572-2466664)
chr7 (272-308)||(33473046-33473082)
chr7 (295-367)||(37250030-37250102)
chr7 (282-365)||(3942174-3942257)
chr7 (275-358)||(23237574-23237657)
chr7 (221-367)||(43052868-43053017)
chr7 (313-367)||(3930811-3930865)
chr7 (272-358)||(30919427-30919513)
chr7 (313-367)||(42072079-42072133)
chr7 (313-358)||(15434248-15434293)
chr7 (311-367)||(29527382-29527438)
chr7 (272-332)||(37106857-37106917)
[»] chr4 (49 HSPs)
chr4 (227-363)||(51995073-51995212)
chr4 (221-367)||(22184494-22184643)
chr4 (227-358)||(12673034-12673168)
chr4 (221-360)||(51407949-51408091)
chr4 (271-367)||(56224136-56224232)
chr4 (220-362)||(80493-80638)
chr4 (221-367)||(1803489-1803633)
chr4 (249-363)||(13455696-13455813)
chr4 (286-361)||(25134571-25134646)
chr4 (282-361)||(40797827-40797906)
chr4 (221-358)||(55891985-55892125)
chr4 (246-366)||(19455183-19455306)
chr4 (221-358)||(28265673-28265810)
chr4 (271-367)||(52813592-52813688)
chr4 (282-364)||(9469771-9469853)
chr4 (271-365)||(36156347-36156441)
chr4 (282-364)||(36543775-36543857)
chr4 (216-367)||(24007898-24008052)
chr4 (272-367)||(7505520-7505615)
chr4 (221-367)||(11055226-11055375)
chr4 (221-359)||(26632935-26633076)
chr4 (221-367)||(50605999-50606148)
chr4 (220-358)||(44378250-44378379)
chr4 (285-365)||(6866170-6866250)
chr4 (247-358)||(48151152-48151266)
chr4 (277-365)||(48339158-48339246)
chr4 (221-367)||(12789552-12789701)
chr4 (272-367)||(52706208-52706303)
chr4 (281-367)||(19852969-19853055)
chr4 (282-367)||(22721319-22721403)
chr4 (318-367)||(43387259-43387308)
chr4 (227-361)||(9222138-9222273)
chr4 (221-332)||(50146918-50147032)
chr4 (221-367)||(45674826-45674975)
chr4 (221-367)||(48977567-48977716)
chr4 (221-367)||(53369863-53370012)
chr4 (281-367)||(21441572-21441658)
chr4 (221-358)||(49405635-49405775)
chr4 (271-359)||(27891386-27891473)
chr4 (281-345)||(34718152-34718216)
chr4 (292-356)||(52733775-52733838)
chr4 (271-362)||(15697136-15697227)
chr4 (271-362)||(43812110-43812201)
chr4 (281-367)||(49820973-49821059)
chr4 (291-361)||(50710843-50710913)
chr4 (313-367)||(53369679-53369733)
chr4 (271-332)||(13761825-13761886)
chr4 (284-365)||(32397764-32397845)
chr4 (233-316)||(9874220-9874306)
[»] chr3 (32 HSPs)
chr3 (221-358)||(12710702-12710842)
chr3 (221-367)||(9505121-9505270)
chr3 (271-358)||(52199429-52199516)
chr3 (253-358)||(39942832-39942940)
chr3 (222-358)||(26049541-26049680)
chr3 (247-362)||(20550228-20550346)
chr3 (221-358)||(30662131-30662271)
chr3 (282-364)||(39135348-39135430)
chr3 (282-364)||(46293277-46293359)
chr3 (221-361)||(40943558-40943701)
chr3 (221-365)||(54393443-54393590)
chr3 (272-367)||(5418669-5418764)
chr3 (286-361)||(54432259-54432334)
chr3 (282-367)||(52934803-52934888)
chr3 (252-367)||(26136324-26136442)
chr3 (282-374)||(39469595-39469687)
chr3 (279-365)||(25253695-25253781)
chr3 (271-365)||(33438784-33438878)
chr3 (302-367)||(52199380-52199445)
chr3 (272-367)||(18074567-18074662)
chr3 (221-367)||(19560774-19560923)
chr3 (271-367)||(28242574-28242670)
chr3 (221-367)||(32689160-32689309)
chr3 (246-359)||(15822374-15822490)
chr3 (281-367)||(41609879-41609965)
chr3 (291-367)||(50965394-50965471)
chr3 (291-367)||(51068529-51068606)
chr3 (311-375)||(53529683-53529747)
chr3 (279-358)||(1674629-1674708)
chr3 (274-332)||(23206364-23206422)
chr3 (292-358)||(28700997-28701063)
chr3 (271-341)||(33691969-33692039)
[»] chr1 (52 HSPs)
chr1 (220-363)||(50447336-50447482)
chr1 (221-358)||(28006350-28006490)
chr1 (219-358)||(24575909-24576051)
chr1 (272-363)||(27076569-27076660)
chr1 (221-363)||(39802767-39802912)
chr1 (247-359)||(5204495-5204610)
chr1 (221-365)||(35810711-35810858)
chr1 (221-367)||(38061178-38061327)
chr1 (227-361)||(40159636-40159773)
chr1 (284-367)||(46265010-46265093)
chr1 (221-362)||(29677519-29677663)
chr1 (220-356)||(47983257-47983396)
chr1 (271-367)||(31869585-31869681)
chr1 (281-358)||(23915660-23915737)
chr1 (221-327)||(12224575-12224684)
chr1 (286-361)||(15257239-15257314)
chr1 (221-367)||(15306484-15306633)
chr1 (284-367)||(42916180-42916263)
chr1 (272-367)||(43087520-43087615)
chr1 (221-351)||(44596524-44596657)
chr1 (221-338)||(21680656-21680776)
chr1 (220-365)||(25124884-25125032)
chr1 (284-365)||(7596386-7596467)
chr1 (271-332)||(14578638-14578699)
chr1 (247-367)||(45653457-45653580)
chr1 (220-359)||(7995970-7996112)
chr1 (272-367)||(19508519-19508614)
chr1 (272-367)||(20349137-20349232)
chr1 (221-367)||(24469817-24469966)
chr1 (221-367)||(32179849-32179998)
chr1 (221-367)||(45581008-45581157)
chr1 (221-366)||(7016075-7016223)
chr1 (272-358)||(48575134-48575220)
chr1 (221-325)||(6413272-6413379)
chr1 (221-361)||(7956321-7956464)
chr1 (272-367)||(14796579-14796674)
chr1 (272-367)||(14805453-14805548)
chr1 (271-366)||(20347658-20347753)
chr1 (221-367)||(36419092-36419241)
chr1 (221-367)||(47602862-47603011)
chr1 (281-367)||(37441249-37441335)
chr1 (292-365)||(40002887-40002960)
chr1 (221-356)||(7702837-7702975)
chr1 (284-332)||(15662975-15663023)
chr1 (271-363)||(42937069-42937161)
chr1 (311-358)||(8828319-8828366)
chr1 (285-367)||(13645247-13645329)
chr1 (233-358)||(31816568-31816696)
chr1 (285-358)||(23916810-23916883)
chr1 (292-332)||(15014341-15014381)
chr1 (291-339)||(30251443-30251491)
chr1 (311-367)||(33233643-33233699)
[»] chr5 (34 HSPs)
chr5 (221-364)||(3801364-3801510)
chr5 (220-362)||(27450580-27450725)
chr5 (221-367)||(34719657-34719806)
chr5 (221-367)||(19716174-19716318)
chr5 (221-367)||(39407397-39407546)
chr5 (221-362)||(10493981-10494125)
chr5 (221-358)||(27196077-27196217)
chr5 (282-364)||(38522925-38523007)
chr5 (224-367)||(26299838-26299984)
chr5 (271-358)||(1840740-1840827)
chr5 (221-367)||(26298302-26298451)
chr5 (272-358)||(41783325-41783411)
chr5 (271-367)||(19282167-19282263)
chr5 (220-367)||(27906089-27906239)
chr5 (272-367)||(14500760-14500855)
chr5 (272-367)||(26218038-26218133)
chr5 (272-367)||(34723707-34723802)
chr5 (221-355)||(34724754-34724891)
chr5 (221-367)||(34857338-34857487)
chr5 (292-367)||(39409131-39409206)
chr5 (291-365)||(2676009-2676083)
chr5 (221-348)||(32945021-32945151)
chr5 (272-367)||(11136061-11136155)
chr5 (272-367)||(30660961-30661056)
chr5 (281-362)||(1225347-1225428)
chr5 (292-361)||(28246729-28246798)
chr5 (274-363)||(17168499-17168590)
chr5 (284-332)||(20190650-20190698)
chr5 (312-364)||(32157031-32157083)
chr5 (276-363)||(1091119-1091205)
chr5 (272-363)||(24536002-24536093)
chr5 (281-367)||(18880183-18880269)
chr5 (221-364)||(15933154-15933303)
chr5 (286-331)||(24202729-24202774)
[»] chr6 (17 HSPs)
chr6 (221-362)||(3081718-3081862)
chr6 (247-367)||(6999258-6999381)
chr6 (221-361)||(13312019-13312164)
chr6 (221-367)||(4441301-4441450)
chr6 (221-348)||(1501858-1501988)
chr6 (221-367)||(5640252-5640401)
chr6 (271-365)||(10961849-10961943)
chr6 (221-362)||(7437300-7437444)
chr6 (221-348)||(17441168-17441298)
chr6 (284-365)||(9950826-9950907)
chr6 (221-358)||(10346721-10346861)
chr6 (272-367)||(22295907-22296002)
chr6 (271-362)||(27984943-27985034)
chr6 (317-367)||(8200633-8200683)
chr6 (316-365)||(12428880-12428929)
chr6 (247-358)||(21093270-21093384)
chr6 (271-367)||(32163532-32163628)
[»] scaffold0171 (1 HSPs)
scaffold0171 (220-358)||(21088-21228)
[»] chr2 (28 HSPs)
chr2 (221-367)||(3409188-3409337)
chr2 (224-367)||(44740486-44740632)
chr2 (221-362)||(40458917-40459061)
chr2 (220-359)||(27464571-27464713)
chr2 (272-359)||(11007026-11007113)
chr2 (272-365)||(34116227-34116320)
chr2 (271-367)||(2578070-2578166)
chr2 (272-367)||(2647028-2647123)
chr2 (244-363)||(12070537-12070659)
chr2 (272-367)||(2328345-2328440)
chr2 (281-356)||(24844729-24844804)
chr2 (221-367)||(27634662-27634811)
chr2 (284-365)||(30713149-30713230)
chr2 (282-358)||(1094457-1094533)
chr2 (291-367)||(38409644-38409720)
chr2 (221-367)||(33831486-33831635)
chr2 (253-367)||(34064696-34064813)
chr2 (281-367)||(26436345-26436431)
chr2 (271-365)||(27902492-27902585)
chr2 (221-314)||(29806950-29807046)
chr2 (255-367)||(9753098-9753212)
chr2 (247-346)||(41332243-41332345)
chr2 (272-359)||(13829877-13829964)
chr2 (272-367)||(14103258-14103353)
chr2 (271-329)||(20203767-20203825)
chr2 (281-367)||(36538647-36538733)
chr2 (312-365)||(39690163-39690216)
chr2 (233-348)||(33163992-33164110)
[»] chr8 (13 HSPs)
chr8 (221-367)||(3307925-3308074)
chr8 (250-358)||(1091727-1091838)
chr8 (284-358)||(27189148-27189222)
chr8 (233-321)||(43384831-43384922)
chr8 (221-367)||(453474-453623)
chr8 (272-367)||(34655026-34655121)
chr8 (272-367)||(43967501-43967596)
chr8 (291-362)||(23181151-23181222)
chr8 (282-365)||(34516131-34516214)
chr8 (281-367)||(11161563-11161649)
chr8 (284-365)||(33280043-33280124)
chr8 (318-378)||(13667432-13667492)
chr8 (318-378)||(13726707-13726767)
[»] scaffold0224 (1 HSPs)
scaffold0224 (284-367)||(7374-7457)
[»] scaffold0063 (1 HSPs)
scaffold0063 (233-359)||(51314-51443)
[»] scaffold0444 (1 HSPs)
scaffold0444 (220-358)||(778-907)
[»] scaffold0204 (1 HSPs)
scaffold0204 (277-365)||(26680-26768)
[»] scaffold0260 (2 HSPs)
scaffold0260 (272-367)||(11460-11555)
scaffold0260 (271-366)||(9981-10076)
[»] scaffold0022 (1 HSPs)
scaffold0022 (282-364)||(124545-124627)
[»] scaffold0002 (1 HSPs)
scaffold0002 (233-358)||(96280-96408)
[»] scaffold0192 (1 HSPs)
scaffold0192 (275-367)||(25623-25714)
[»] scaffold0135 (1 HSPs)
scaffold0135 (227-361)||(32791-32926)
[»] scaffold0316 (1 HSPs)
scaffold0316 (221-367)||(19287-19436)
[»] scaffold0954 (1 HSPs)
scaffold0954 (275-358)||(241-324)
[»] scaffold0223 (1 HSPs)
scaffold0223 (221-348)||(14436-14566)


Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 20 - 367
Target Start/End: Original strand, 29037579 - 29037929
Alignment:
Q  20 gacaccaccacctatttttagttattgtggaaagaatgaagctcttgacattgtctttcctgattggtcctattggggttggtaagtctcctatattaaa 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29037579 gacaccaccacctatttttagttattgtggaaagaatgaagctcttgacattgtctttcctgattggtcctattggggttggtaagtctcctatattaaa 29037678  T
Q  120 ttactacttattaatgtggatttttggaatgttaataagtttaacaaggtggtatacacgattttgttgaagctttaaaatgtaaagtgatggcgcgtgc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||| |||     
T  29037679 ttactacttattaatgtggatttttggaatgttaataagtttaacaaggtgctatacacgattttgttgaagcattaaaatgtagcgtgatggcgagtgt 29037778  T
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaactt 316  Q
    ||||| || ||||| ||||||||||| |||||||||||| |||| |||||||   |||||||||| |||||||||||||||||| |||||||||||||||    
T  29037779 ataggactagcagtcaaccgtaccagctcgaaaatagtttgagactcgattcggtaattaatttgctgaactttgttcatgaaccaaatgagacgaactt 29037878  T
Q  317 gagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||| ||||||||||||||||||||||||||||||||| || ||||||||||    
T  29037879 gagttgaaaattaagtccgttaaacaaatgagttgaatttaaactatatat 29037929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 222 - 362
Target Start/End: Original strand, 18249994 - 18250137
Alignment:
Q  222 agggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttga 318  Q
    |||||||||| ||||||| ||||  ||||||||||||| ||| |||||||   |||| ||| ||||||||| |||||||||| ||||||| |||||||||    
T  18249994 agggctggcaatgaaccgaaccaactcgaaaatagttcaagactcgattcgataattgattcgttgaacttggttcatgaaccaaatgagtcgaacttga 18250093  T
Q  319 gctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    | ||||||||| |  ||||||| |||||||||||||||||||||    
T  18250094 gttgaaaattatgctcgttaaataaatgagttgaacttgaacta 18250137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 29017715 - 29017803
Alignment:
Q  20 gacaccaccacctatttttagttattgtggaaagaatgaagctcttgacattgtctttcctgattggtcctattggggttggtaagtct 108  Q
    ||||| ||||||||||||||||||||||||| | ||||| |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  29017715 gacactaccacctatttttagttattgtggacaaaatgatgctcttgatattgtctttcctgattggtccttttggggttggtaagtct 29017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 7447957 - 7447875
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactata 364  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  7447957 ttgaacttggttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgttaattaaatgagttgaacttgaactata 7447875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 367
Target Start/End: Complemental strand, 10619013 - 10618917
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||| | ||||||||| ||||||||||||||||||  |||||||||||||||||||||| ||||||| ||||||| ||||||||| || |||||    
T  10619013 caattaactcgttgaacttggttcatgaactaaatgagctgaacttgagctgaaaattaagttcgttaaataaatgagctgaacttgagctgtatat 10618917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 221 - 356
Target Start/End: Original strand, 33898944 - 33899082
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  ||||||||||||||| |||||||||   ||||| ||  ||| |||| |||||||||| ||||||| ||||||||    
T  33898944 tagggctgacaatgaaccgaaccaactcgaaaatagttcgatattcgattcgagaattagttcattggacttggttcatgaaccaaatgagtcgaacttg 33899043  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaactt 356  Q
    || |||||||||||  ||||||| |||||||||||||||    
T  33899044 agttgaaaattaagctcgttaaataaatgagttgaactt 33899082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 33935653 - 33935504
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| |||| || ||||  |||| ||||||| | || |||||||   |||||| | ||||||||| |||||||||| ||| |||  |||||||    
T  33935653 tagggctggcaatgaatcgaaccaactcgacaatagtttgggactcgattcgataattaactcgttgaacttggttcatgaaccaaacgagctgaacttg 33935554  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||||||||||| ||||||||| || |||||    
T  33935553 agctgaaaattaagttcgttaaacaaatgagatgaacttgagctttatat 33935504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 49034224 - 49034373
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||||||  ||||||  |||  ||||||||||||||| |||||||||   ||||  || ||||||||| |||||||||| ||||||| ||||||||    
T  49034224 tagggctggcaacgaaccgatccaactcgaaaatagttcgaaattcgattcggtaattgtttcgttgaacttggttcatgaaccaaatgagtcgaacttg 49034323  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    || |||||||||||  ||| ||| |||||||| |||||||||||| ||||    
T  49034324 agttgaaaattaagctcgtcaaataaatgagtcgaacttgaactacatat 49034373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 358
Target Start/End: Original strand, 46573612 - 46573752
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  || |||||| |||||||||||||||   |||| | | ||||||||| |||||||||| ||||||| |||||||     
T  46573612 tagggctggcaatgaaccgaaccaactcaaaaataattcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaactta 46573711  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    || |||||||||||  ||||||| |||||||| ||||||||    
T  46573712 agttgaaaattaagctcgttaaataaatgagtcgaacttga 46573752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 26719892 - 26719817
Alignment:
Q  286 actttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    |||| |||||||||| ||||||| |||||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  26719892 acttggttcatgaaccaaatgagtcgaacttgagttgaaaattaagttcgttaaataaatgagttgaacttgaact 26719817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 358
Target Start/End: Original strand, 17025361 - 17025501
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  ||||||||||||| || ||||||||   |||| | | ||||||||| ||||| |||| ||||||| ||||||||    
T  17025361 tagggctgacaatgaaccgaaccaactcgaaaatagttcaaggttcgattcgataattgactcgttgaacttggttcacgaaccaaatgagtcgaacttg 17025460  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    || |||||||||||  ||||||| |||||||| ||||||||    
T  17025461 agttgaaaattaagctcgttaaataaatgagtcgaacttga 17025501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 358
Target Start/End: Original strand, 18740218 - 18740358
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||| |||| ||||||| ||||  ||||||||||||||||||||||||    |||| | |  || ||||| |||||||||| ||||||| ||||||||    
T  18740218 tagggccggcaatgaaccgaaccaactcgaaaatagttcgagattcgatttgataattgactcattaaacttggttcatgaaccaaatgagtcgaacttg 18740317  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    || |||||||||||  ||||||| |||||||| ||||||||    
T  18740318 agttgaaaattaagctcgttaaataaatgagtcgaacttga 18740358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 233 - 358
Target Start/End: Original strand, 21760595 - 21760723
Alignment:
Q  233 tgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaatta 329  Q
    ||||||| ||||  ||||||||||||||| | |||||||   |||| ||| ||||||||||||||| |||| ||||||| |||||||||| |||||| ||    
T  21760595 tgaaccgaaccaactcgaaaatagttcgaaactcgattcgataattgattcgttgaactttgttcacgaaccaaatgagtcgaacttgagttgaaaacta 21760694  T
Q  330 agtccgttaaacaaatgagttgaacttga 358  Q
    |   ||||||| |||||||||||||||||    
T  21760695 aactcgttaaataaatgagttgaacttga 21760723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 363
Target Start/End: Complemental strand, 32357077 - 32356961
Alignment:
Q  250 aaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatg 346  Q
    |||||||||||||| |||||||   |||||||| |||||||||  ||||||||||||||||| |||| ||||| ||||||| |||| ||||||  ||| |    
T  32357077 aaaatagttcgagactcgattcgataattaattcgttgaacttgattcatgaactaaatgagccgaatttgagttgaaaataaagttcgttaagtaaacg 32356978  T
Q  347 agttgaacttgaactat 363  Q
    |||||||||| ||||||    
T  32356977 agttgaacttaaactat 32356961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 221 - 362
Target Start/End: Original strand, 35543556 - 35543697
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || |||| || ||||  |||||||||||| |||| || ||||   |||| ||| ||||||||| |||||||||||||||||| ||||||||    
T  35543556 tagggctgacaatgaatcgaaccaactcgaaaatagtttgagactccattcgataattgattcgttgaacttggttcatgaactaaatgagtcgaacttg 35543655  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    || |||||||||||  ||   || |||||||||||||||||||||    
T  35543656 agttgaaaattaagctcg---aataaatgagttgaacttgaacta 35543697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 44421901 - 44422051
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  |||| ||||||| | || |||||||   |||||| | ||||||||| |||||||||| ||| |||  |||||||    
T  44421901 tagggctgtcaatgaaccgaaccaactcgacaatagtttgggactcgattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttg 44422000  T
Q  318 agctgaaaa-ttaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||| |||||| ||||||||||||||| ||||||||| || |||||    
T  44422001 agctgaaaatttaagttcgttaaacaaatgagctgaacttgagctttatat 44422051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 36472521 - 36472442
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaac 360  Q
    ||||||||| |||||||||| ||||||| |||||||||| |||||||||||  ||||||| |||| ||||||||||||||    
T  36472521 gttgaacttggttcatgaaccaaatgagccgaacttgagttgaaaattaagctcgttaaataaataagttgaacttgaac 36472442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 17608812 - 17608710
Alignment:
Q  263 attcgattcaattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    ||||||||||||| ||| || |||||| ||| |||||| ||||||| ||||||||| ||||||||||||| ||| ||  || |||||||||||||| |||    
T  17608812 attcgattcaattgattcgtcgaacttggttgatgaaccaaatgagccgaacttgatctgaaaattaagttcgtcaactaattgagttgaacttgatcta 17608713  T
Q  363 tat 365  Q
    |||    
T  17608712 tat 17608710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 221 - 358
Target Start/End: Complemental strand, 33124840 - 33124700
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  |||| ||||||| || | |||||||   |||||| | ||||||||| ||| |||||| ||||||   |||||||    
T  33124840 tagggctggcaatgaaccgaaccaactcgacaatagtttgaaactcgattcgacaattaactcgttgaacttggtttatgaaccaaatgaattgaacttg 33124741  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||||||||||||| ||||||| ||||||| |||| ||||    
T  33124740 agctgaaaattaagttcgttaaataaatgagctgaatttga 33124700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 271 - 367
Target Start/End: Complemental strand, 22075155 - 22075059
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||| | ||||||| | ||||| |||| |||||||  |||||||||||||||||||||| ||||||| ||||||| ||||||||| || |||||    
T  22075155 caattaactcgttgaacgtggttcacgaaccaaatgagctgaacttgagctgaaaattaagttcgttaaataaatgagctgaacttgatctgtatat 22075059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 222226 - 222375
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  |||| ||||||| | || | |||||   |||||| | |||||| || |||||||||| ||| |||  |||||||    
T  222226 tagggctggcaatgaaccgaaccaactcgacaatagtttgggacttgattcgacaattaactcgttgaatttggttcatgaaccaaacgagctgaacttg 222325  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    | ||||||||||| | ||||||||||||||| ||||||||| || |||||    
T  222326 aactgaaaattaaattcgttaaacaaatgagctgaacttgagctttatat 222375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 45055819 - 45055724
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| || ||||||||| |||||||||| ||| ||| |||||||||||| || ||||||| ||||||  |||||||||||||||||  |||||||    
T  45055819 aattagttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatat 45055724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 45176336 - 45176241
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||  ||||||||| |||||||||| ||| |||  |||||| ||||||||||||||| ||||||  ||||||||||||||||| ||| ||||    
T  45176336 aattaatccgttgaacttggttcatgaaccaaacgagctgaactttagctgaaaattaagttcgttaattaaatgagttgaacttgagctacatat 45176241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 358
Target Start/End: Original strand, 23226999 - 23227139
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||| | ||| ||| ||||  |||| |||||||||| | |||||||   |||||  ||||||||||| || ||||||  |||||||  |||||||    
T  23226999 tagggctggtaatgatccgaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggtacatgaatcaaatgagctgaacttg 23227098  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||||||||||||| ||||||| |||||||  ||||||||    
T  23227099 agctgaaaattaagttcgttaaataaatgagccgaacttga 23227139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 358
Target Start/End: Original strand, 23236152 - 23236292
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||| | ||| ||| ||||  |||| |||||||||| | |||||||   |||||  ||||||||||| || ||||||  |||||||  |||||||    
T  23236152 tagggctggtaatgatccgaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggtacatgaatcaaatgagctgaacttg 23236251  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||||||||||||| ||||||| |||||||  ||||||||    
T  23236252 agctgaaaattaagttcgttaaataaatgagccgaacttga 23236292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 363
Target Start/End: Complemental strand, 31491931 - 31491815
Alignment:
Q  250 aaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatg 346  Q
    ||||||||| ||||||||||||   |||||||| |||||||||    ||||||| ||||||| ||||||| | || || ||||||| ||||||| ||||     
T  31491931 aaaatagtttgagattcgattcgataattaattcgttgaacttgacacatgaaccaaatgagtcgaacttaaactcaatattaagttcgttaaataaatt 31491832  T
Q  347 agttgaacttgaactat 363  Q
    |||||||||||||||||    
T  31491831 agttgaacttgaactat 31491815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 281 - 350
Target Start/End: Complemental strand, 48634529 - 48634460
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagtt 350  Q
    ||||||||| |||||||||| |||||||  ||||||||||| |||||||||| ||||||| |||||||||    
T  48634529 gttgaacttggttcatgaaccaaatgagttgaacttgagctaaaaattaagttcgttaaataaatgagtt 48634460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Original strand, 11595850 - 11595945
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| || ||||||||| |||||||||| ||| ||| |||||||||||| || ||||||| ||||||  ||||||||||| |||||  |||||||    
T  11595850 aattagttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaccttgagttatatat 11595945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 367
Target Start/End: Complemental strand, 37334427 - 37334274
Alignment:
Q  217 tgcatagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaa 313  Q
    ||||||||| || || ||||||| ||||  ||||  ||||||||| ||||||||| ||   ||||  ||||||||| ||||||||||  || |||  | |    
T  37334427 tgcatagggttgacaatgaaccgaaccaactcgattatagttcgacattcgattcgatatttaatccgttgaacttggttcatgaacctaacgagctgga 37334328  T
Q  314 cttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  37334327 cttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 37334274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 367
Target Start/End: Complemental strand, 36927143 - 36926995
Alignment:
Q  222 agggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttga 318  Q
    |||||||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  || |||  | ||||||    
T  36927143 agggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagttggacttga 36927044  T
Q  319 gctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||| |||||||||| ||||||  ||||||||||||||||| ||| ||||    
T  36927043 gctaaaaattaagttcgttaattaaatgagttgaacttgagctacatat 36926995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 281 - 367
Target Start/End: Original strand, 48505851 - 48505937
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||| ||||||||||  ||||||  | |||||||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  48505851 gttgaacttggttcatgaacctaatgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 48505937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 37239910 - 37239829
Alignment:
Q  286 actttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||| |||||||||| |||||||| ||| ||||||| ||||| ||||  ||||| |||||||||||||||| || |||||||    
T  37239910 acttggttcatgaaccaaatgagatgaatttgagcttaaaatcaagtttgttaatcaaatgagttgaacttcaaatatatat 37239829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 367
Target Start/End: Original strand, 40480104 - 40480200
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaat-gagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| || ||||||||| |||||||||| |||  ||| |||||||||||| || ||||||| ||||||  |||||||||||||||||  |||||||    
T  40480104 aattagttcgttgaacttggttcatgaaccaaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatat 40480200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 5776130 - 5776279
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||| ||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  || |||  | |||||    
T  5776130 tagggttggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 5776229  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  5776230 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 5776279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 5794936 - 5795085
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||   |||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  || |||  | |||||    
T  5794936 tagggctggcaatgaaccgaaccaacccgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 5795035  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  5795036 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 5795085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 358
Target Start/End: Original strand, 33171534 - 33171674
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgatt---caattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||| ||| ||||  |||| |||||||||| | |||||    ||||||  |||||||||||  || |||||| |||||||  |||||||    
T  33171534 tagggctggcaatgatccgaaccaactcgataatagttcgaaactcgataagacaattatcttgttgaacttgatttatgaaccaaatgagctgaacttg 33171633  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    |||| |||||||||| | ||||| |||||||  ||||||||    
T  33171634 agctaaaaattaagttcattaaataaatgagccgaacttga 33171674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 365
Target Start/End: Original strand, 37401565 - 37401713
Alignment:
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaactt 316  Q
    ||||||||| || ||||||  |||| |||||  | ||||||  |||||||||   |||| |||||||||||||  ||||||||| ||||||| | |||||    
T  37401565 atagggctgacaatgaaccaaaccaattcgattagagttcgtaattcgattcgaaaattgatttgttgaacttgattcatgaaccaaatgagccaaactt 37401664  T
Q  317 gagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||| |||||||||||| ||| ||  || |||| |||| |||| ||||||    
T  37401665 gagttgaaaattaagttcgtcaactaattgagctgaagttgagctatat 37401713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 365
Target Start/End: Original strand, 2466572 - 2466664
Alignment:
Q  274 ttaatttgttgaactttgttcatgaactaaatgag-acgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    |||| ||||||||||| ||||| ||||| ||||||    ||||||||||||||||| ||| ||||||| ||||||| | ||||| ||||||||    
T  2466572 ttaacttgttgaacttggttcacgaacttaatgagctaaaacttgagctgaaaatttagttcgttaaataaatgagctaaacttaaactatat 2466664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 33473046 - 33473082
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgag 308  Q
    |||||||||||||||||||||||||||| ||||||||    
T  33473046 aattaatttgttgaactttgttcatgaattaaatgag 33473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 37250102 - 37250030
Alignment:
Q  295 atgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||| ||||||| || |||||||||||||||||| | |||||| ||| |||| | ||||||||||| ||||    
T  37250102 atgaaccaaatgagccgcacttgagctgaaaattaatttcgttaaccaagtgagctaaacttgaactaaatat 37250030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 365
Target Start/End: Complemental strand, 3942257 - 3942174
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    |||||||| |||||||||| ||||||  |  |||||||||||||||||||| ||| ||  || |||| ||||||||| ||||||    
T  3942257 ttgaacttggttcatgaaccaaatgaaccagacttgagctgaaaattaagttcgtgaattaattgagctgaacttgagctatat 3942174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 358
Target Start/End: Original strand, 23237574 - 23237657
Alignment:
Q  275 taatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||| |||| |||| ||||||||||  ||| || |||||||||| | | |||||||| ||||||  |||||||||||||||||    
T  23237574 taattcgttggacttggttcatgaacctaattagccgaacttgagttaagaattaagttcgttaattaaatgagttgaacttga 23237657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 43053017 - 43052868
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||| ||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  ||||||  | |||||    
T  43053017 tagggttggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaatgagctggacttg 43052918  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||| ||||||||||| ||||||  | ||||| ||||||||| ||| ||||    
T  43052917 agccgaaaattaagttcgttaattagatgagctgaacttgagctacatat 43052868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 367
Target Start/End: Original strand, 3930811 - 3930865
Alignment:
Q  313 acttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  3930811 acttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 3930865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 30919513 - 30919427
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    |||| ||| ||||||||| ||| | |||| ||||||| |||||||||| |||||| |||   ||||| | |||||||||||||||||    
T  30919513 aattgattcgttgaacttggtttacgaaccaaatgagtcgaacttgagttgaaaactaaactcgttagataaatgagttgaacttga 30919427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 367
Target Start/End: Complemental strand, 42072133 - 42072079
Alignment:
Q  313 acttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  42072133 acttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 42072079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 15434293 - 15434248
Alignment:
Q  313 acttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    |||||||||||||||||||| ||||||  ||||||| |||||||||    
T  15434293 acttgagctgaaaattaagttcgttaattaaatgagctgaacttga 15434248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 29527438 - 29527382
Alignment:
Q  311 gaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||| ||||| ||||||||| ||||||  ||||||| | ||||||||||||||||    
T  29527438 gaacttcagctgtaaattaagttcgttaattaaatgagctaaacttgaactatatat 29527382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 37106917 - 37106857
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagt 332  Q
    |||||||| || |||||| ||| ||| || ||||||| |||||||||||| ||||||||||    
T  37106917 aattaattcgtcgaacttagttaatgtaccaaatgagccgaacttgagctaaaaattaagt 37106857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 363
Target Start/End: Complemental strand, 51995212 - 51995073
Alignment:
Q  227 tggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctga 323  Q
    ||||| ||||||| ||||  ||||||||||||||||| |||||||   |||||||| ||||||||| |||||||||| ||||||| |||||||||||| |    
T  51995212 tggcaatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattaattcgttgaacttggttcatgaaccaaatgagccgaacttgagctca 51995113  T
Q  324 aaattaagtccgttaaacaaatgagttgaacttgaactat 363  Q
    |||||||||  |||||| ||| ||||||||||||||||||    
T  51995112 aaattaagtttgttaaataaacgagttgaacttgaactat 51995073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 22184643 - 22184494
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  |||| ||||||| | || |||||||   |||||| | ||||||||| |||||||||| ||| |||  |||||||    
T  22184643 tagggctggcaatgaaccgaaccaactcgacaatagtttgggactcgattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttg 22184544  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  22184543 agctgaaaattaagttcgttaaacaaatgagctgaacttgaactttatat 22184494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 358
Target Start/End: Original strand, 12673034 - 12673168
Alignment:
Q  227 tggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctga 323  Q
    ||||| ||||||| ||||  |||||||||||||||||||||||||   |||| | | ||||||||| |||||||||| ||||||| |||||||||| |||    
T  12673034 tggcaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttgagttga 12673133  T
Q  324 aaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||||||  | ||||| |||||||| ||||||||    
T  12673134 aaattaagctcattaaataaatgagtcgaacttga 12673168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 221 - 360
Target Start/End: Original strand, 51407949 - 51408091
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||| | ||||  ||||||||||||||||| |||||||   |||||||| ||| ||||| |||||||||| ||||||| ||||| ||    
T  51407949 tagggctgacaatgaactgaaccaactcgaaaatagttcgagactcgattcggtaattaattcgttcaacttggttcatgaaccaaatgagtcgaacctg 51408048  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaac 360  Q
     | | |||||||||| ||| |||||||||||||||||||||||    
T  51408049 ggtttaaaattaagttcgtcaaacaaatgagttgaacttgaac 51408091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 271 - 367
Target Start/End: Complemental strand, 56224232 - 56224136
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||| ||||||||| ||| || ||| ||||||| ||||||||||||||||||||| | ||||||  |||| |||||||||||||||||||||    
T  56224232 caattaattcgttgaacttggttaataaaccaaatgagccgaacttgagctgaaaattaaattcgttaattaaataagttgaacttgaactatatat 56224136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 362
Target Start/End: Complemental strand, 80638 - 80493
Alignment:
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaactt 316  Q
    |||||||||||| |||||||  |||  ||||||||||||||| ||| |||||   ||||  || ||||||||| |||||||||| ||||||| |||||||    
T  80638 atagggctggcaatgaaccgatccaactcgaaaatagttcgaaatttgattcggtaattgtttcgttgaacttggttcatgaaccaaatgagtcgaactt 80539  T
Q  317 gagctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    ||| |||||||||||  ||| ||| |||||||  ||||||||||||    
T  80538 gagttgaaaattaagctcgtcaaataaatgagccgaacttgaacta 80493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 1803633 - 1803489
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaattaatttgttgaactttgttcatgaactaaatgagacgaacttgagc 320  Q
    |||||||| || ||||||| ||||  ||||||| ||| |||||||||||  |||| ||| ||| |||||  |||||||||  |||||| ||||||||||     
T  1803633 tagggctgacaatgaaccgaaccaactcgaaaagagtgcgagattcgat--aattgattcgttaaacttgattcatgaacctaatgagtcgaacttgagt 1803536  T
Q  321 tgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    | |||||||||  ||||||| ||||||||||||||||||||| ||||    
T  1803535 ttaaaattaagctcgttaaataaatgagttgaacttgaactaaatat 1803489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 249 - 363
Target Start/End: Complemental strand, 13455813 - 13455696
Alignment:
Q  249 gaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaat 345  Q
    ||||||| || ||||||||||||   |||||||| |||||||||  || |||||| ||||||| | |||||||||| |||||||||| ||||||| |||     
T  13455813 gaaaataatttgagattcgattcgataattaattcgttgaacttgatttatgaaccaaatgagtccaacttgagctcaaaattaagttcgttaaataaac 13455714  T
Q  346 gagttgaacttgaactat 363  Q
    ||||||||||||||||||    
T  13455713 gagttgaacttgaactat 13455696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 25134646 - 25134571
Alignment:
Q  286 actttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    |||| |||||||||| ||||||| |||||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  25134646 acttggttcatgaaccaaatgagtcgaacttgagttgaaaattaagttcgttaaataaatgagttgaacttgaact 25134571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 361
Target Start/End: Complemental strand, 40797906 - 40797827
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    |||||||| |||||||||| ||||||| |||||||||| |||||||||||  ||||||| ||||||||||||||||||||    
T  40797906 ttgaacttggttcatgaaccaaatgagtcgaacttgagttgaaaattaagctcgttaaataaatgagttgaacttgaact 40797827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 358
Target Start/End: Original strand, 55891985 - 55892125
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||| | ||||  || |||||||||||||| |||||||   |||||||| ||||||||| |||||||||| ||| ||| ||||| ||    
T  55891985 tagggctgacaatgaactgaaccaactcaaaaatagttcgagactcgattcggtaattaattcgttgaacttggttcatgaaccaaacgagtcgaacctg 55892084  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
     | | |||||||||| ||| |||||||||||||||||||||    
T  55892085 ggtttaaaattaagttcgtcaaacaaatgagttgaacttga 55892125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 366
Target Start/End: Original strand, 19455183 - 19455306
Alignment:
Q  246 ttcgaaaatagttcgagattcgatt---caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaaca 342  Q
    |||||||||||||||| | ||||||   ||||||||| ||||||||| |||||||||  |||||||  ||||||||| ||||||||||||  ||||   |    
T  19455183 ttcgaaaatagttcgaaactcgatttgacaattaattcgttgaacttggttcatgaatcaaatgagctgaacttgagttgaaaattaagtttgttatcta 19455282  T
Q  343 aatgagttgaacttgaactatata 366  Q
    |||||||||||||||| |||||||    
T  19455283 aatgagttgaacttgagctatata 19455306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 221 - 358
Target Start/End: Original strand, 28265673 - 28265810
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||| | ||||  ||||||||||||||||| |||||||   |||||||| ||||||||| |||||||||| ||| ||   |||  ||    
T  28265673 tagggctggcaatgaactgaaccaactcgaaaatagttcgagactcgattcggtaattaattcgttgaacttggttcatgaaccaaacga---gaatctg 28265769  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    || | |||||||||| ||| |||||||||||||||||||||    
T  28265770 agtttaaaattaagttcgtcaaacaaatgagttgaacttga 28265810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 367
Target Start/End: Complemental strand, 52813688 - 52813592
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||| | ||||||||| |||||||||| ||| |||  |||||| ||||||||||||||| ||||||||||||||| ||||||||| || |||||    
T  52813688 caattaactcgttgaacttggttcatgaaccaaacgagctgaacttaagctgaaaattaagttcgttaaacaaatgagctgaacttgagctttatat 52813592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 9469853 - 9469771
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactata 364  Q
    |||||||| |||||||||| ||||||| | ||||||||||||||||||||| |||| |  ||||||| |||||||||||||||    
T  9469853 ttgaacttggttcatgaaccaaatgagccaaacttgagctgaaaattaagttcgttgattaaatgagctgaacttgaactata 9469771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 36156347 - 36156441
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||| ||| ||||||||| |||| ||||| ||||||| ||||||||||||||||||||||| ||| ||  || |||| ||||||||||||||||    
T  36156347 caattgattcgttgaacttggttcttgaaccaaatgagccgaacttgagctgaaaattaagttcgtcaactaattgagctgaacttgaactatat 36156441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 36543857 - 36543775
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactata 364  Q
    |||||||| |||||||||| |||| || | ||||||||||||||||||||| ||||||  ||||||| |||||||||||||||    
T  36543857 ttgaacttggttcatgaaccaaataagccaaacttgagctgaaaattaagttcgttaattaaatgagctgaacttgaactata 36543775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 367
Target Start/End: Original strand, 24007898 - 24008052
Alignment:
Q  216 gtgcatagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaatta---atttgttgaactttgttcatgaactaaatgagacga 312  Q
    ||||||||||||| || ||||  | ||||  ||||||||||||||||||||||||  || |   ||| ||||||||| ||||||||||  || |||   |    
T  24007898 gtgcatagggctgacaatgaattgaaccaactcgaaaatagttcgagattcgatttgatgattgattcgttgaacttggttcatgaacctaacgagttaa 24007997  T
Q  313 acttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||| | |||||||||| ||||||| ||||||||||||||||| ||| ||||    
T  24007998 acttgagtttaaaattaagttcgttaaataaatgagttgaacttgagctaaatat 24008052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 7505615 - 7505520
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| || |||||||||  ||||||||| ||||||| |||||||||||| |||||||| | ||||||  |||||||||||||||||  |||||||    
T  7505615 aattagttcgttgaacttgattcatgaaccaaatgagccgaacttgagctaaaaattaaattcgttaactaaatgagttgaacttgagttatatat 7505520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 11055226 - 11055375
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  |||| |||||||||  | |||||||   |||||| |  |||||||| |||||||||| |||||||  |||||||    
T  11055226 tagggctgacaatgaaccgaaccaactcgacaatagttcggaactcgattcgataattaactcattgaacttggttcatgaaccaaatgagctgaacttg 11055325  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||| ||||||||||| ||||||| |||||||  |||||||| || |||||    
T  11055326 agcggaaaattaagttcgttaaataaatgagccgaacttgagctgtatat 11055375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 359
Target Start/End: Complemental strand, 26633076 - 26632935
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||| |||| ||||||| ||||  |||| |||||||||  | |||||||   |||||| | ||||||||| | |||| ||| |||||||  |||||||    
T  26633076 tagggccggcaatgaaccgaaccaactcgataatagttcgtaactcgattcgacaattaactcgttgaacttggctcattaaccaaatgagctgaacttg 26632977  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaa 359  Q
    ||||||||||||||| ||||||| |||||||  |||||||||    
T  26632976 agctgaaaattaagttcgttaaataaatgagccgaacttgaa 26632935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 50606148 - 50605999
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| |||| |||||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  || |||  | |||||    
T  50606148 tagggctggcaatgaaccgaaccaattcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 50606049  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  50606048 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 50605999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 358
Target Start/End: Complemental strand, 44378379 - 44378250
Alignment:
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaattaatttgttgaactttgttcatgaactaaatgagacgaacttgag 319  Q
    ||||||||| || ||||||| |||| ||||||||||||| |||| |||||||         ||||||||| |||||||||| |||||||  ||| ||| |    
T  44378379 atagggctgccaatgaaccgaaccaattcgaaaatagtttgagactcgattc---------gttgaacttggttcatgaaccaaatgagttgaatttggg 44378289  T
Q  320 ctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
     |||||||||||  ||||||| |||||||||||||||||    
T  44378288 ttgaaaattaagctcgttaaataaatgagttgaacttga 44378250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 6866170 - 6866250
Alignment:
Q  285 aactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||| ||| ||  || |||| ||||||||| ||||||    
T  6866170 aacttggttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgtcaactaattgagctgaacttgagctatat 6866250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 358
Target Start/End: Original strand, 48151152 - 48151266
Alignment:
Q  247 tcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaa 343  Q
    |||| |||||||||| | |||||||   |||||  ||||||||||| |||||  ||| |||||||  |||||||||||||||||||||| ||||||| ||    
T  48151152 tcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggttcacaaaccaaatgagctgaacttgagctgaaaattaagttcgttaaataa 48151251  T
Q  344 atgagttgaacttga 358  Q
    || ||| ||||||||    
T  48151252 ataagtcgaacttga 48151266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 365
Target Start/End: Original strand, 48339158 - 48339246
Alignment:
Q  277 atttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||| ||| ||  || |||| ||||||| | ||||||    
T  48339158 atttgttgaacttggttcatgaatcaaatgagtcgaacttgagctgaaaattaagttcgtcaactaattgagctgaacttaagctatat 48339246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 12789552 - 12789701
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| ||| ||||||  || |||  |||||||    
T  12789552 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggtttatgaacctaacgagctgaacttg 12789651  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  12789652 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 12789701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 52706303 - 52706208
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| || ||| ||||| |||||||||| ||| ||| |||||||||||| || ||||||| ||||||  |||||||||||||||||  |||||||    
T  52706303 aattagttcgttaaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatat 52706208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 19853055 - 19852969
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||| ||||||||||  || |||| | |||||||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  19853055 gttgaacttggttcatgaacctaacgagatggacttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 19852969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 367
Target Start/End: Complemental strand, 22721403 - 22721319
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||| |||||||||| ||| ||| | ||||| |||| |||||||||| ||||||| |||||||||||||||||  |||||||    
T  22721403 ttgaacttggttcatgaaccaaacgaggcaaacttaagct-aaaattaagttcgttaaataaatgagttgaacttgagttatatat 22721319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 43387308 - 43387259
Alignment:
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  43387308 agctgaaaattaaatccgttaaacaaatgagctgaacttgaactttatat 43387259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 9222138 - 9222273
Alignment:
Q  227 tggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctga 323  Q
    ||||| ||||||| ||||  ||||||||||||||| | |||||||   ||||  || ||||||||| |||||   || ||||||| |||||||||| ||     
T  9222138 tggcaatgaaccgaaccaactcgaaaatagttcgatactcgattcgacaattggttcgttgaacttggttcac--accaaatgagtcgaacttgagttgt 9222235  T
Q  324 aaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    ||||||||  ||||||| |||||| |||||||||||||    
T  9222236 aaattaagctcgttaaataaatgaattgaacttgaact 9222273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 332
Target Start/End: Original strand, 50146918 - 50147032
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||| ||| ||||||| |||| |||||  | ||||||  |||||||||   |||| ||| ||||||||| |||||||||| ||||||  || |||||    
T  50146918 tagggctagcaatgaaccgaaccaattcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgaaccggacttg 50147017  T
Q  318 agctgaaaattaagt 332  Q
    |||||||||||||||    
T  50147018 agctgaaaattaagt 50147032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 45674975 - 45674826
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  || |||||| ||||||||||  || |||  | |||||    
T  45674975 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgtcgaacttggttcatgaacctaacgagctggacttg 45674876  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||| | ||||||  ||||||||||||||||| ||| ||||    
T  45674875 agctgaaaattaaattcgttaattaaatgagttgaacttgagctacatat 45674826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 48977716 - 48977567
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||| ||||| |||||| || ||   ||||| ||||||||| ||||||||||  ||||||  | || ||    
T  48977716 tagggctggcaatgaaccgaaccaactcgattataattcgacattcgactcgatatttaattcgttgaacttcgttcatgaacctaatgagctggacatg 48977617  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||| | ||||||  ||||||| ||||||||| ||| ||||    
T  48977616 agctgaaaattaaattcgttaattaaatgagctgaacttgagctacatat 48977567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 53370012 - 53369863
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||||||||| |||| | || ||   ||||  ||||||||| ||||||||||  || |||  | |||||    
T  53370012 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcaactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 53369913  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  53369912 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 53369863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 21441658 - 21441572
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||| ||||||||||  || |||  | |||||||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  21441658 gttgaacttggttcatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 21441572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 358
Target Start/End: Original strand, 49405635 - 49405775
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||   |||||||||||||| | |||||||   |||| ||| ||||||||| ||| |||||| ||||||| ||||||||    
T  49405635 tagggctgacaatgaaccgaaccaacccgaaaatagttcgaaactcgattcggtaattgattcgttgaacttggtttatgaaccaaatgagtcgaacttg 49405734  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    |   ||||||||||  ||| ||| |||||||  ||||||||    
T  49405735 aatcgaaaattaagctcgtcaaataaatgagccgaacttga 49405775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 359
Target Start/End: Complemental strand, 27891473 - 27891386
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaa 359  Q
    ||||||| | ||||||||| |||||||||| |||||||  ||||||||||||||||| || |  |||||| ||||||| |||| |||||    
T  27891473 caattaactcgttgaacttggttcatgaac-aaatgagctgaacttgagctgaaaatcaaatttgttaaataaatgagctgaatttgaa 27891386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 34718216 - 34718152
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaat 345  Q
    |||||| || ||| |||||||||||||| ||||||| ||||||||||||| | ||||||| ||||    
T  34718216 gttgaatttggtttatgaactaaatgagtcgaacttcagctgaaaattaatttcgttaaataaat 34718152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 356
Target Start/End: Original strand, 52733775 - 52733838
Alignment:
Q  292 ttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaactt 356  Q
    ||||||||| |||||||  ||| |||||||||||||||||| ||||||| |||| ||||||||||    
T  52733775 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaataagttgaactt 52733838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 362
Target Start/End: Original strand, 15697136 - 15697227
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    ||||| ||| |||||||||  ||||||||| |||| ||  ||||||||||| |||||||||| ||||||   |||||| ||||| |||||||    
T  15697136 caattgattcgttgaacttgattcatgaaccaaataagctgaacttgagctaaaaattaagttcgttaacttaatgagctgaacatgaacta 15697227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 362
Target Start/End: Original strand, 43812110 - 43812201
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    ||||| ||| || |||||| |||||||||| ||||| | ||||||| | ||||||||||||| ||| ||  || |||| |||||||||||||    
T  43812110 caattgattcgtcgaacttggttcatgaaccaaatgggccgaacttaaactgaaaattaagttcgtaaactaattgagctgaacttgaacta 43812201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 49821059 - 49820973
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||| ||||||||||  || |||  | |||| ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  49821059 gttgaacttggttcatgaacctaacgagctggacttaagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 49820973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 50710843 - 50710913
Alignment:
Q  291 gttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    |||||||||  ||||||| |||| ||||| |||||||||||  ||||||| |||| |||||||||| ||||    
T  50710843 gttcatgaatcaaatgagtcgaaattgagttgaaaattaagctcgttaaataaataagttgaacttaaact 50710913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 367
Target Start/End: Complemental strand, 53369733 - 53369679
Alignment:
Q  313 acttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  53369733 acttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 53369679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 13761886 - 13761825
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagt 332  Q
    ||||||| | |||| |||| |||||||||| |||||||  ||| ||||||||||||||||||    
T  13761886 caattaactcgttggacttggttcatgaaccaaatgagctgaatttgagctgaaaattaagt 13761825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 365
Target Start/End: Original strand, 32397764 - 32397845
Alignment:
Q  284 gaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    |||||| |||||||||  |||| || ||||||||| || |||||||||| ||| ||  || |||| ||||||||||||||||    
T  32397764 gaacttggttcatgaatcaaataagccgaacttgaactaaaaattaagttcgtcaactaattgagctgaacttgaactatat 32397845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 9874220 - 9874306
Alignment:
Q  233 tgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaactt 316  Q
    ||||||| ||||  || |||||||||| |||||||||||   |||||||| |||||| || || ||||||| ||||||| |||||||    
T  9874220 tgaaccgaaccaactcaaaaatagttcaagattcgattcagtaattaattcgttgaaattggtacatgaaccaaatgagccgaactt 9874306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 221 - 358
Target Start/End: Complemental strand, 12710842 - 12710702
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  |||||||||||||||||||||||||   |||| | | ||||||||| |||||||||| ||||||| ||||||||    
T  12710842 tagggctggcaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttg 12710743  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    || |||||||||||  ||||||| |||||||| ||||||||    
T  12710742 agttgaaaattaagctcgttaaataaatgagtcgaacttga 12710702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 9505121 - 9505270
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  |||| |||||||||  | |||||||   |||||| | ||||||||| |||||||||| |||||||  |||||||    
T  9505121 tagggctggcaatgaaccgaaccaactcgacaatagttcggaactcgattcgacaattaactcgttgaacttggttcatgaaccaaatgagttgaacttg 9505220  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||| ||||||| |||||||||  |||||||    
T  9505221 agctgaaaattaagttcgttaaataaatgagctgaacttgagatatatat 9505270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 52199516 - 52199429
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||||||| ||||||||| |||||||||| ||| |||  |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  52199516 caattaattcgttgaacttggttcatgaaccaaacgagctgaacttgagctgaaaattaagttcgttaaacaaatgagctgaacttga 52199429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 39942832 - 39942940
Alignment:
Q  253 atagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagt 349  Q
    ||||||||| |||||||||   ||||||| |||||||||| ||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||     
T  39942832 atagttcgaaattcgattcggcaattaatctgttgaacttggttcatgaacttaatgagctgaacttgagctgaaaattaagttcgttaaatagatgagc 39942931  T
Q  350 tgaacttga 358  Q
    |||||||||    
T  39942932 tgaacttga 39942940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 222 - 358
Target Start/End: Original strand, 26049541 - 26049680
Alignment:
Q  222 agggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttga 318  Q
    |||||||||| ||||||| ||||  |||||||||||| ||||||||||||   |||| |  |||||||||| |||||||||  ||||||| |||||||||    
T  26049541 agggctggcaatgaaccgaaccaactcgaaaatagtttgagattcgattcgataattgacctgttgaacttggttcatgaatcaaatgagtcgaacttga 26049640  T
Q  319 gctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    | |||||||||||  ||||||| |||| ||| ||||||||    
T  26049641 gttgaaaattaagctcgttaaataaattagtcgaacttga 26049680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 247 - 362
Target Start/End: Original strand, 20550228 - 20550346
Alignment:
Q  247 tcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaa 343  Q
    ||||||||||||||| | |||||||   |||| ||||||||||||| ||||| |||| ||||||| ||||| |||| |||||||||| | ||||||| ||    
T  20550228 tcgaaaatagttcgatactcgattcgataattgatttgttgaacttggttcacgaaccaaatgagtcgaacatgagttgaaaattaaattcgttaaataa 20550327  T
Q  344 atgagttgaacttgaacta 362  Q
    |||||||| ||||||||||    
T  20550328 atgagttgtacttgaacta 20550346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 358
Target Start/End: Original strand, 30662131 - 30662271
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||| ||| ||||  |||||||||||| ||||||||||||   |||| | | ||||||||| |||||||||  ||||||| ||||||||    
T  30662131 tagggctgacaatgagccgaaccaactcgaaaatagtttgagattcgattcgataattgactcgttgaacttggttcatgaatcaaatgagtcgaacttg 30662230  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    || |||||||||||  ||||||| |||||||| ||||||||    
T  30662231 agttgaaaattaagctcgttaaataaatgagtcgaacttga 30662271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 39135430 - 39135348
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactata 364  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||| ||||||  ||||||| ||||||| |||||||    
T  39135430 ttgaacttggttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgttaattaaatgagctgaacttaaactata 39135348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 364
Target Start/End: Original strand, 46293277 - 46293359
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactata 364  Q
    ||||| || |||||||||| ||||||| ||||||||||||||||||||||| ||||||  ||||||||||||||| |||||||    
T  46293277 ttgaatttggttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgttaattaaatgagttgaacttaaactata 46293359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 361
Target Start/End: Complemental strand, 40943701 - 40943558
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| | ||||| ||||  ||||||||||||||| | ||||||    ||||  ||  ||| |||| |||||||||| ||||||| ||||||||    
T  40943701 tagggctggcaataaaccgaaccaactcgaaaatagttcgatactcgatttgataattggttcattggacttggttcatgaaccaaatgagtcgaacttg 40943602  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    || |||||||||||  ||||||| ||||||||||||||||||||    
T  40943601 agttgaaaattaagctcgttaaataaatgagttgaacttgaact 40943558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 365
Target Start/End: Original strand, 54393443 - 54393590
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  | ||||||  |||||||||   |||| ||| ||||||||| |||||| ||| ||||||| ||||||||    
T  54393443 tagggctggcaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcataaaccaaatgagccgaacttg 54393542  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||||||||||||| ||| ||| || ||||  |||||||||||||||    
T  54393543 agctgaaaattaagttcgtcaaataattgagccgaacttgaactatat 54393590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 5418764 - 5418669
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| |||||||||||| |||||||||| ||| ||| |||||||||||| || ||||||| ||||||  |||||||||||||||||  |||||||    
T  5418764 aattagtttgttgaacttagttcatgaaccaaacgagtcgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatat 5418669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 54432259 - 54432334
Alignment:
Q  286 actttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    |||| |||||||||||||||||| |||||||||| | |||||||||  ||||||| ||||||||||||||||||||    
T  54432259 acttggttcatgaactaaatgagtcgaacttgagttaaaaattaagctcgttaaataaatgagttgaacttgaact 54432334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 367
Target Start/End: Complemental strand, 52934888 - 52934803
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||| |||||||||| |||||||  |||||||||| ||||||||||| ||||||| |||||||  |||||||| ||||||||    
T  52934888 ttgaacttggttcatgaaccaaatgagctgaacttgagcagaaaattaagttcgttaaataaatgagccgaacttgatctatatat 52934803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 367
Target Start/End: Complemental strand, 26136442 - 26136324
Alignment:
Q  252 aatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgag 348  Q
    ||||||| |||| |||||||   ||||| |||||||||||| ||| ||||||||| |||| |||||||||| | ||||||| ||  ||||||||||||||    
T  26136442 aatagtttgagactcgattcgttaattagtttgttgaacttggtttatgaactaagtgagccgaacttgagttcaaaattatgtttgttaaacaaatgag 26136343  T
Q  349 ttgaacttgaactatatat 367  Q
    |||||| | ||||| ||||    
T  26136342 ttgaacataaactacatat 26136324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 374
Target Start/End: Original strand, 39469595 - 39469687
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatattcttcga 374  Q
    |||||||| |||||||||  ||||||| ||||||||||||||||||||||| ||||||  ||||||| | |||||||| |||| ||| |||||    
T  39469595 ttgaacttggttcatgaatcaaatgagccgaacttgagctgaaaattaagttcgttaattaaatgagctaaacttgaattatagattgttcga 39469687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 365
Target Start/End: Complemental strand, 25253781 - 25253695
Alignment:
Q  279 ttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||||||||| |||||||||| |||||||  ||||||||||| |||||||||| ||||||| |||||||  |||||| | ||||||    
T  25253781 ttgttgaacttggttcatgaaccaaatgagctgaacttgagctaaaaattaagttcgttaaataaatgagccgaacttaagctatat 25253695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 33438784 - 33438878
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||| ||| ||||||||| |||||||||| ||||||| ||||||||||||||||||||||| ||| ||  || |||| | || |||||||||||    
T  33438784 caattgattcgttgaacttggttcatgaaccaaatgagtcgaacttgagctgaaaattaagttcgtcaactaattgagctaaagttgaactatat 33438878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 52199445 - 52199380
Alignment:
Q  302 aaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||  |||||||||||||||||||||| ||||||||||||||| ||||||||| || |||||    
T  52199445 aaatgagctgaacttgagctgaaaattaagttcgttaaacaaatgagctgaacttgagctttatat 52199380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 18074662 - 18074567
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||| |||||| ||  |||||||||||||||||  ||| |||| ||||||||||||| ||||||  ||||||| |||| |||| ||||||||    
T  18074662 aattaattcgttgaatttgtttcatgaactaaatgagttgaatttgaactgaaaattaagttcgttaactaaatgagctgaaattgagctatatat 18074567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 19560774 - 19560923
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||| ||||||||  |||||| ||   |||||||| ||||||||| |||||||||| |||  ||  |||||||    
T  19560774 tagggctggcaatgaaccgaaccaactcgaatatagttcggaattcgactcgacaattaattcgttgaacttggttcatgaacgaaacaagctgaacttg 19560873  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    || | | | |||||||||||||| |||||||  ||||||||  |||||||    
T  19560874 agttaagagttaagtccgttaaataaatgagccgaacttgagttatatat 19560923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 367
Target Start/End: Complemental strand, 28242670 - 28242574
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||| | |||||| || |||||||||| |||||||  ||| |||||||||||||||| | ||||||| ||||||  ||||||||| || |||||    
T  28242670 caattaactcgttgaatttggttcatgaaccaaatgagctgaatttgagctgaaaattaaattcgttaaataaatgatctgaacttgagctgtatat 28242574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 32689309 - 32689160
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  || |||  | |||||    
T  32689309 tagggctgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 32689210  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  32689209 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 32689160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 359
Target Start/End: Original strand, 15822374 - 15822490
Alignment:
Q  246 ttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaaca 342  Q
    |||||||||||||||| |||||||||   ||||  || ||||||||| |||||||| | || ||||  ||||||||| |||||||||||  ||| ||| |    
T  15822374 ttcgaaaatagttcgaaattcgattcggtaattgtttcgttgaacttggttcatgatccaattgagtagaacttgagttgaaaattaagctcgtcaaata 15822473  T
Q  343 aatgagttgaacttgaa 359  Q
    ||||||  |||||||||    
T  15822474 aatgagccgaacttgaa 15822490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 41609965 - 41609879
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||| ||||||||||  || |||  | |||||||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  41609965 gttgaacttggttcatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 41609879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 50965471 - 50965394
Alignment:
Q  291 gttcatgaactaaatgagacgaacttgagctg-aaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||  ||||||  ||| |||||||| |||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  50965471 gttcatgaacctaatgagctgaatttgagctgaaaaattaagttcgttaaataaatgagctgaacttgagctatatat 50965394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 51068606 - 51068529
Alignment:
Q  291 gttcatgaactaaatgagacgaacttgagctg-aaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||  ||||||  ||| |||||||| |||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  51068606 gttcatgaacctaatgagctgaatttgagctgaaaaattaagttcgttaaataaatgagctgaacttgagctatatat 51068529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 53529683 - 53529747
Alignment:
Q  311 gaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatattcttcgac 375  Q
    |||||||||||||||||||||| ||| ||  || |||| |||||||||||||||| || ||||||    
T  53529683 gaacttgagctgaaaattaagttcgtcaactaattgagctgaacttgaactatatgttgttcgac 53529747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 358
Target Start/End: Complemental strand, 1674708 - 1674629
Alignment:
Q  279 ttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||||||||| |||||||||| |||||||  |||||| |||||||||||  ||  |||||| |||| || |||||||||    
T  1674708 ttgttgaacttggttcatgaaccaaatgagttgaacttaagctgaaaattttgtatgttaaataaataagctgaacttga 1674629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 23206364 - 23206422
Alignment:
Q  274 ttaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagt 332  Q
    ||||| |||||||||||||||||||||  || |||  | ||||||||||||||||||||    
T  23206364 ttaatctgttgaactttgttcatgaacctaacgagctggacttgagctgaaaattaagt 23206422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 28701063 - 28700997
Alignment:
Q  292 ttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||||||| |||| ||  ||| |||| ||||||||||| | ||||||| |||||||||||||||||    
T  28701063 ttcatgaaccaaataagttgaagttgaactgaaaattaaattcgttaaaaaaatgagttgaacttga 28700997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 341
Target Start/End: Original strand, 33691969 - 33692039
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaac 341  Q
    ||||| |||||||||| || |||||| |||||||||| | ||||||||||| || | ||||| ||||||||    
T  33691969 caattgatttgttgaatttggttcataaactaaatgaaatgaacttgagcttaagagtaagttcgttaaac 33692039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 220 - 363
Target Start/End: Complemental strand, 50447482 - 50447336
Alignment:
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaactt 316  Q
    ||||||||| || ||||||  ||||  ||||||||||||||||| |||||||   |||||||| ||| ||||| ||| |||||| ||||||| |||||||    
T  50447482 atagggctgacaatgaaccaaaccaactcgaaaatagttcgagactcgattcgataattaattcgttaaacttggtttatgaaccaaatgagccgaactt 50447383  T
Q  317 gagctgaaaattaagtccgttaaacaaatgagttgaacttgaactat 363  Q
    || || |||||||||| ||||||| ||||||||||||||||||||||    
T  50447382 gaacttaaaattaagttcgttaaataaatgagttgaacttgaactat 50447336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 221 - 358
Target Start/End: Complemental strand, 28006490 - 28006350
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||| |||| ||||||| ||||  |||||||||||||||||||||||||   |||| | | ||||||||| |||||||||| ||||||| ||||||||    
T  28006490 tagggccggcaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttg 28006391  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    || |||||||||||  ||||||| |||||||| ||||||||    
T  28006390 agttgaaaattaagctcgttaaataaatgagtcgaacttga 28006350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 358
Target Start/End: Complemental strand, 24576051 - 24575909
Alignment:
Q  219 catagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaact 315  Q
    |||||||||| || ||||||| ||||  ||||||||||||||||||| |||||   |||| | | ||||||||| |||||||||| |||||| |||||||    
T  24576051 catagggctgacaatgaaccgaaccaactcgaaaatagttcgagatttgattcgataattgactcgttgaacttggttcatgaaccaaatgaaacgaact 24575952  T
Q  316 tgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    |||| |||||||||||   |||||| |||||||| ||||||||    
T  24575951 tgagttgaaaattaagcttgttaaataaatgagtcgaacttga 24575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 272 - 363
Target Start/End: Original strand, 27076569 - 27076660
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactat 363  Q
    |||||||| ||||||||| || ||||||||||||||| |||||||||||| ||| |||||| ||||||| ||| ||||||||||||||||||    
T  27076569 aattaattcgttgaacttggtccatgaactaaatgagccgaacttgagctcaaagttaagttcgttaaataaacgagttgaacttgaactat 27076660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 221 - 363
Target Start/End: Original strand, 39802767 - 39802912
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| |||| || ||||  ||||||||||||||||| ||| |||   | |||||| ||||||| | |||||||||| ||||||| ||||||||    
T  39802767 tagggctggcaatgaatcgaaccaactcgaaaatagttcgagactcggttcggcagttaattcgttgaacatggttcatgaaccaaatgagtcgaacttg 39802866  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactat 363  Q
    || |||||||||||| ||||||| |||||||  |||||||| ||||    
T  39802867 agttgaaaattaagttcgttaaataaatgagccgaacttgagctat 39802912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 247 - 359
Target Start/End: Original strand, 5204495 - 5204610
Alignment:
Q  247 tcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaa 343  Q
    |||||||||||| ||||||||||||   |||| | | ||||||||| |||| ||||| ||||||| |||||||||| |||||||||||| ||||||| ||    
T  5204495 tcgaaaatagtttgagattcgattcgataattgactcgttgaacttggttcgtgaaccaaatgagtcgaacttgagttgaaaattaagttcgttaaataa 5204594  T
Q  344 atgagttgaacttgaa 359  Q
    |||||| |||||||||    
T  5204595 atgagtcgaacttgaa 5204610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 221 - 365
Target Start/End: Complemental strand, 35810858 - 35810711
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  | ||||||  |||||||||   |||| ||| ||||||||| |||||||||| ||||||| ||||||||    
T  35810858 tagggctggcaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgagccgaacttg 35810759  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||||||||||||| ||| ||| || ||||  |||||||||||||||    
T  35810758 agctgaaaattaagttcgtcaaataattgagccgaacttgaactatat 35810711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 38061178 - 38061327
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||||||||| ||||||||||||    |||| ||| |||||||||  || ||||||  |||||| |||||||     
T  38061178 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgatttgataattgattcgttgaacttgatttatgaacctaatgagtcgaactta 38061277  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    || | |||||||||  ||||||| ||||||||||||||||||||| ||||    
T  38061278 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatat 38061327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 40159636 - 40159773
Alignment:
Q  227 tggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctga 323  Q
    ||||| ||||||| ||||  |||||||||||| || |||||||||   ||||  ||  ||| |||| |||||||||  ||||||| |||||||||| |||    
T  40159636 tggcaatgaaccgaaccaactcgaaaatagtttgatattcgattcgataattggttcattggacttggttcatgaatcaaatgagtcgaacttgagttga 40159735  T
Q  324 aaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  40159736 aaattaagttcgttaaataaatgagttgaacttgaact 40159773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 46265010 - 46265093
Alignment:
Q  284 gaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||| || |||  || |||| ||||||||||||||||||    
T  46265010 gaacttggttcatgaactaaatgagccgaacttgagctgaaaattaagttcgctaactaattgagctgaacttgaactatatat 46265093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 362
Target Start/End: Original strand, 29677519 - 29677663
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||||||||||||| | ||||||    ||||  || ||||||||| ||||| |||| ||||||| ||||||||    
T  29677519 tagggctggcaatgaaccgaaccaactcgaaaatagttcgatactcgatttgataattggttcgttgaacttggttcacgaaccaaatgagtcgaacttg 29677618  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    || |||||||||||  | ||||| ||||||| |||||||||||||    
T  29677619 agttgaaaattaagctctttaaataaatgagctgaacttgaacta 29677663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 356
Target Start/End: Complemental strand, 47983396 - 47983257
Alignment:
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaactt 316  Q
    |||||| || || ||||||| ||||  |||||||||||||||||||||||||   |||| ||||||||||||| ||||| |||| ||||||| |||||||    
T  47983396 atagggttgacaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgatttgttgaacttggttcacgaaccaaatgagtcgaactt 47983297  T
Q  317 gagctgaaaattaagtccgttaaacaaatgagttgaactt 356  Q
    ||| | |||  |||   ||||||| |||||||||||||||    
T  47983296 gagttaaaatctaaactcgttaaataaatgagttgaactt 47983257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 367
Target Start/End: Complemental strand, 31869681 - 31869585
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||| | ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||| |||||||  |||||||| || |||||    
T  31869681 caattaaatcgttgaacttggttcatgaaccaaatgagccgaacttaagctgaaaattaagttcgttaaataaatgagccgaacttgagctgtatat 31869585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 281 - 358
Target Start/End: Original strand, 23915660 - 23915737
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||||||| |||||||||| |||||||  |||||| ||||||||||||||| | ||||| |||||||||||||||||    
T  23915660 gttgaacttggttcatgaaccaaatgagctgaactttagctgaaaattaagttcattaaataaatgagttgaacttga 23915737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 12224575 - 12224684
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  |||| |||||||||  |||||||||   |||||| | ||||||||| |||||||||| ||||||| ||||||||    
T  12224575 tagggctgacaatgaaccgaaccaactcgacaatagttcggaattcgattcgacaattaactcgttgaacttggttcatgaaccaaatgagccgaacttg 12224674  T
Q  318 agctgaaaat 327  Q
    ||||||||||    
T  12224675 agctgaaaat 12224684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 15257239 - 15257314
Alignment:
Q  286 actttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    |||| |||||||||| ||||||| |||||||||| |||||||||||  ||||||| |||||||||||| |||||||    
T  15257239 acttggttcatgaaccaaatgagtcgaacttgagttgaaaattaagctcgttaaataaatgagttgaatttgaact 15257314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 15306633 - 15306484
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  | || |||||||||  | |||||||   ||||||||  |||||||| |||||||||| |||||||  |||||||    
T  15306633 tagggctggcaatgaaccgaaccaacttgacaatagttcggaactcgattcgataattaattcattgaacttggttcatgaaccaaatgagctgaacttg 15306534  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||| ||||||||||| | ||||| |||||||  |||||||| || |||||    
T  15306533 agcggaaaattaagttcattaaataaatgagccgaacttgagctgtatat 15306484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 42916180 - 42916263
Alignment:
Q  284 gaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||||||| || |||  || |||| ||||||||||| ||||||    
T  42916180 gaacttggttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgctaactaattgagctgaacttgaaccatatat 42916263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 367
Target Start/End: Original strand, 43087520 - 43087615
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| |||||||||||| |||||||||| ||| ||| ||||||||| || || ||||||| ||||||  |||||||||||||||||  |||||||    
T  43087520 aattagtttgttgaacttggttcatgaaccaaacgagccgaacttgaactaaagattaagttcgttaattaaatgagttgaacttgagttatatat 43087615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 351
Target Start/End: Complemental strand, 44596657 - 44596524
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  |||| ||||||| |  | |||||||   |||||| | |||||| || |||||||||| |||||||  |||||||    
T  44596657 tagggctggcaatgaaccgaaccaactcgacaatagtttggaactcgattcgacaattaactcgttgaatttggttcatgaaccaaatgagctgaacttg 44596558  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttg 351  Q
    | ||||||||||||| ||||||| ||||||||||    
T  44596557 aactgaaaattaagttcgttaaataaatgagttg 44596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 338
Target Start/End: Original strand, 21680656 - 21680776
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||| ||||| ||||||| ||||| ||||||||||||||| | |||||||   |||||  | ||||||||| ||| |||||  ||||||| ||||||||    
T  21680656 tagggttggcaatgaaccgaaccagctcgaaaatagttcgaaactcgattcgataattatctcgttgaacttggtttatgaatgaaatgagccgaacttg 21680755  T
Q  318 agctgaaaattaagtccgtta 338  Q
    |||| |||||||||| |||||    
T  21680756 agctaaaaattaagttcgtta 21680776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 365
Target Start/End: Original strand, 25124884 - 25125032
Alignment:
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaactt 316  Q
    |||||||||||| ||||||| ||||  ||||  | ||||||  ||||||||    |||| ||| ||||||||| |||||||||| ||||||| |||||||    
T  25124884 atagggctggcaatgaaccgaaccaactcgattaaagttcgtaattcgatttgataattgattcgttgaacttggttcatgaaccaaatgagccgaactt 25124983  T
Q  317 gagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    |||||||||||||| | ||| ||  || |||| ||||||||| ||||||    
T  25124984 gagctgaaaattaatttcgtgaactaattgagctgaacttgagctatat 25125032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 284 - 365
Target Start/End: Complemental strand, 7596467 - 7596386
Alignment:
Q  284 gaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    |||||| ||| |||||| ||||||| ||||||||||||||||||||||| || |||  || |||| ||||||||||||||||    
T  7596467 gaacttggtttatgaaccaaatgagccgaacttgagctgaaaattaagttcgctaactaattgagctgaacttgaactatat 7596386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 271 - 332
Target Start/End: Original strand, 14578638 - 14578699
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagt 332  Q
    ||||| ||||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||    
T  14578638 caattgatttgttgaacttggttcatgaaccaaatgagccgaactggagctgaaaattaagt 14578699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 247 - 367
Target Start/End: Original strand, 45653457 - 45653580
Alignment:
Q  247 tcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaa 343  Q
    ||||||||||||| | | |||||||   ||||| || ||||||||| |||||||||| ||||||| |||||||||||| ||| |||||| |||||   ||    
T  45653457 tcgaaaatagttcaaaactcgattcgacaattatttcgttgaacttggttcatgaaccaaatgagccgaacttgagctaaaagttaagttcgttagctaa 45653556  T
Q  344 atgagttgaacttgaactatatat 367  Q
    ||||  ||||| ||||||||||||    
T  45653557 atgaactgaacatgaactatatat 45653580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 359
Target Start/End: Complemental strand, 7996112 - 7995970
Alignment:
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaactt 316  Q
    |||||| || || ||||||| ||||  | |||||||||||||||||||||||   |||| ||| ||||||||| |||||| |||  |||||| |||||||    
T  7996112 atagggttgacaatgaaccgaaccaacttgaaaatagttcgagattcgattcgataattgattcgttgaacttggttcataaacctaatgagtcgaactt 7996013  T
Q  317 gagctgaaaattaagtccgttaaacaaatgagttgaacttgaa 359  Q
     || | |||||||||  ||||||| ||||||| | ||||||||    
T  7996012 aagtttaaaattaagctcgttaaataaatgagctcaacttgaa 7995970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 19508614 - 19508519
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| || ||||||||| |||||||||| ||| ||| |||||||||||| || ||||||| ||||||  ||||||||||| |||||  |||||||    
T  19508614 aattagttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaccttgagttatatat 19508519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 20349232 - 20349137
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||| |||||||||  |||||  || ||||||| ||||||| || |||||||||||| ||||||  ||||||| |||| |||||||||||||    
T  20349232 aattaattcgttgaacttgattcatataccaaatgagccgaacttcagatgaaaattaagttcgttaattaaatgagctgaatttgaactatatat 20349137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 24469817 - 24469966
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  || |||  | |||||    
T  24469817 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 24469916  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  24469917 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 24469966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 32179998 - 32179849
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| |||||| |||  ||||||  | |||||    
T  32179998 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcataaacctaatgagctggacttg 32179899  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  32179898 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 32179849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 45581008 - 45581157
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  | ||||||||||||| | |||||||   |||||  | ||||||||| |||||||||| |||||||  |||||||    
T  45581008 tagggctgacaatgaaccgaaccaacttgaaaatagttcgaaactcgattcgataattatctcgttgaacttggttcatgaaccaaatgagttgaacttg 45581107  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||| ||||||||||| | ||||  ||||||| ||||| | | ||||||||    
T  45581108 agcggaaaattaagttcattaactaaatgagatgaacattagctatatat 45581157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 221 - 366
Target Start/End: Original strand, 7016075 - 7016223
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  ||||| | | ||||||| |||||||   |||| ||||||||||||| |||||||||| |||||||  |||||||    
T  7016075 tagggctgacaatgaaccgaaccaactcgaacaaaattcgagactcgattcgacaattgatttgttgaacttggttcatgaaccaaatgagctgaacttg 7016174  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatata 366  Q
    |||| |||| |||||  ||||| | ||| || ||| ||||| |||||||    
T  7016175 agctcaaaactaagtttgttaacctaataagctgagcttgagctatata 7016223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 358
Target Start/End: Original strand, 48575134 - 48575220
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    |||||||| ||||||||| |||||||||| ||| ||  |||||||||  | |||||||||| ||| ||| |||||||||||||||||    
T  48575134 aattaattcgttgaacttggttcatgaaccaaacgaatcgaacttgaatttaaaattaagttcgtcaaataaatgagttgaacttga 48575220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 6413379 - 6413272
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgatt---caattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| |||| || ||||  ||||||||||||||||||||||||    |||| ||| ||||||| | |||||||||| ||||||  ||||||||    
T  6413379 tagggctggcaatgaatcgaaccaactcgaaaatagttcgagattcgatttgataattgattcgttgaacctggttcatgaaccaaatgaatcgaacttg 6413280  T
Q  318 agctgaaa 325  Q
    || |||||    
T  6413279 agttgaaa 6413272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 361
Target Start/End: Complemental strand, 7956464 - 7956321
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||| ||||| ||||||| ||||  ||||||||||||||| | || ||||   ||||  ||  ||| |||| |||||||||| |||| || ||||||||    
T  7956464 tagggttggcaatgaaccgaaccaactcgaaaatagttcgatactcaattcgataattggttcattggacttggttcatgaacaaaattagtcgaacttg 7956365  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    |  |||||||||||   |||||| ||||||||||||||||||||    
T  7956364 aattgaaaattaagcttgttaaataaatgagttgaacttgaact 7956321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 14796674 - 14796579
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||| ||||||| | |||||||||| || | ||  |||||||| ||  ||||||||| ||||||| |||||||||||||||  |||||||||    
T  14796674 aattaattcgttgaacgtggttcatgaaccaattaagttgaacttgaactttaaattaagttcgttaaataaatgagttgaactttgactatatat 14796579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 14805548 - 14805453
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||| ||||||| | |||||||||| || | ||  |||||||| ||  ||||||||| ||||||| |||||||||||||||  |||||||||    
T  14805548 aattaattcgttgaacgtggttcatgaaccaattaagttgaacttgaactttaaattaagttcgttaaataaatgagttgaactttgactatatat 14805453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 20347753 - 20347658
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatata 366  Q
    ||||||||| |||||| ||  |||||| || ||||||| ||||||| || |||||||||||| ||||||  ||||||| |||| ||| ||||||||    
T  20347753 caattaattcgttgaatttgattcatgtaccaaatgagccgaacttaagatgaaaattaagttcgttaattaaatgagctgaatttgtactatata 20347658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 36419241 - 36419092
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  || |||||| ||||||||||  ||||||  | |||||    
T  36419241 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgtcgaacttggttcatgaacctaatgagctggacttg 36419142  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||| ||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  36419141 agccgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 36419092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 47602862 - 47603011
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  || |||  | |||||    
T  47602862 tagggctgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 47602961  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  47602962 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 47603011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 367
Target Start/End: Original strand, 37441249 - 37441335
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||| ||||||||||  || |||  | |||||||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  37441249 gttgaacttggttcatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 37441335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 40002960 - 40002887
Alignment:
Q  292 ttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||||||  ||||||| |||||||||| |||||||||||| ||| ||  || |||||||||||||| ||||||    
T  40002960 ttcatgaatcaaatgagccgaacttgagttgaaaattaagttcgtcaactaattgagttgaacttgagctatat 40002887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 356
Target Start/End: Complemental strand, 7702975 - 7702837
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| |||||||||   || |||  | |||||    
T  7702975 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaagctaacgagctggacttg 7702876  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaactt 356  Q
    ||||||||||||||| ||||||  ||||||| |||||||    
T  7702875 agctgaaaattaagttcgttaattaaatgagctgaactt 7702837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 15663023 - 15662975
Alignment:
Q  284 gaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagt 332  Q
    |||||| ||||||| || ||||||| |||||||||||||||||||||||    
T  15663023 gaacttggttcatgtaccaaatgagccgaacttgagctgaaaattaagt 15662975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 363
Target Start/End: Complemental strand, 42937161 - 42937069
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactat 363  Q
    ||||| ||| || |||||| |||||||||  ||||||| |||||||||||| |||||||||| ||| ||  || |||| ||||||||| ||||    
T  42937161 caattgattcgtcgaacttggttcatgaatcaaatgagccgaacttgagcttaaaattaagttcgtcaactaattgagctgaacttgagctat 42937069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 311 - 358
Target Start/End: Original strand, 8828319 - 8828366
Alignment:
Q  311 gaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||||||||||||||||||||| |||||  |||| ||||||||||||    
T  8828319 gaacttgagctgaaaattaagtctgttaactaaataagttgaacttga 8828366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 367
Target Start/End: Original strand, 13645247 - 13645329
Alignment:
Q  285 aactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| |||||||||  ||| ||| |||||||||||| || ||||||| ||||||  |||||||||||| ||||  |||||||    
T  13645247 aacttggttcatgaatcaaacgagccgaacttgagctaaagattaagttcgttaagtaaatgagttgaatttgagttatatat 13645329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 358
Target Start/End: Complemental strand, 31816696 - 31816568
Alignment:
Q  233 tgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaatta 329  Q
    ||||||| ||||  ||||||||||||||| | || ||||   |||| ||| ||||||||| |||||||||| |||||||  |||||| ||  ||||||||    
T  31816696 tgaaccgaaccaactcgaaaatagttcgaaactcaattcggtaattgattcgttgaacttggttcatgaaccaaatgagttgaacttcagtcgaaaatta 31816597  T
Q  330 agtccgttaaacaaatgagttgaacttga 358  Q
    ||  ||| ||| |||||||  ||||||||    
T  31816596 agctcgtcaaataaatgagccgaacttga 31816568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 358
Target Start/End: Complemental strand, 23916883 - 23916810
Alignment:
Q  285 aactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||| |||||| ||| ||||||| | ||||||||||||||||||||| ||| ||  || |||| |||||||||    
T  23916883 aacttggttcattaaccaaatgagcctaacttgagctgaaaattaagttcgtcaactaattgagctgaacttga 23916810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 15014381 - 15014341
Alignment:
Q  292 ttcatgaactaaatgagacgaacttgagctgaaaattaagt 332  Q
    ||||||||| ||||||| |||||||||| ||||||||||||    
T  15014381 ttcatgaaccaaatgagccgaacttgagttgaaaattaagt 15014341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 30251491 - 30251443
Alignment:
Q  291 gttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaa 339  Q
    |||||||||||||||||   ||||||||||| |||||||||| ||||||    
T  30251491 gttcatgaactaaatgaattgaacttgagctaaaaattaagttcgttaa 30251443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 33233643 - 33233699
Alignment:
Q  311 gaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||||||||||||||||  ||||||  ||| ||||| ||||||| ||||||||    
T  33233643 gaacttgagctgaaaattaaggtcgttaactaaacgagtttaacttgagctatatat 33233699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 221 - 364
Target Start/End: Original strand, 3801364 - 3801510
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||| ||||||||  |||||| ||   ||||  ||  |||||||| |||||||||| ||||||| ||||||||    
T  3801364 tagggctggcaatgaaccgaaccaactcgaatatagttcgtaattcgactcgacaattggttcattgaacttggttcatgaaccaaatgagccgaacttg 3801463  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactata 364  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||    
T  3801464 agctgaaaattaagttcgttaattaaatgagttgaacttgaactata 3801510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 220 - 362
Target Start/End: Original strand, 27450580 - 27450725
Alignment:
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaactt 316  Q
    |||||||||||| ||||||| ||||  ||||||||||| |||||||||||||   |||| ||| |||||| ||  |||||||||  |||||| |||||||    
T  27450580 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaatttgattcatgaacctaatgagtcgaactt 27450679  T
Q  317 gagctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    ||| | |||||||||  ||||||| |||||||||||||||||||||    
T  27450680 gagtttaaaattaagctcgttaaataaatgagttgaacttgaacta 27450725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 34719657 - 34719806
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| |||| || ||||  ||||||||||| ||||||| |||||   |||| ||| |||||||||  |||||||||| |||||| ||||||||    
T  34719657 tagggctggcaatgaaacgaaccaactcgaaaatagtgcgagatttgattcgataattgattcgttgaacttgattcatgaacttaatgagtcgaacttg 34719756  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    || | |||||||||  ||||||| ||||||||||||||||||||| ||||    
T  34719757 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatat 34719806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 19716318 - 19716174
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaattaatttgttgaactttgttcatgaactaaatgagacgaacttgagc 320  Q
    ||||||||||| ||||||| ||||  ||||||||||| |||||||||||  |||| ||| |||||||||  |||||||||  |||||| ||||||| ||     
T  19716318 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgat--aattgattcgttgaacttgattcatgaacctaatgagtcgaacttaagt 19716221  T
Q  321 tgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    | |||||||||  ||||||| |||||| |||||||||||||| ||||    
T  19716220 ttaaaattaagctcgttaaataaatgaattgaacttgaactaaatat 19716174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 39407546 - 39407397
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||| | ||||||| ||||  || |||||||| |||||||||||||   |||| ||| |||||||||  |||||||||  |||||| ||||||||    
T  39407546 tagggctggtaatgaaccgaaccaactcaaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 39407447  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    || | |||||||||  ||||||| ||||||||||||||||||||| ||||    
T  39407446 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatat 39407397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 362
Target Start/End: Complemental strand, 10494125 - 10493981
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaattaat---ttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  || ||||||||| || |||||||||||| | |   | ||||||||| |||||  ||| ||||||| ||||||||    
T  10494125 tagggctggcaatgaaccgaaccaactcaaaaatagtttgatattcgattcaataattggttcgttgaacttggttcacaaaccaaatgagtcgaacttg 10494026  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    || |||||||||||  ||||||| ||||||| |||||||||||||    
T  10494025 agttgaaaattaagctcgttaaataaatgagctgaacttgaacta 10493981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 358
Target Start/End: Complemental strand, 27196217 - 27196077
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  ||||||||||||||||| |||||||   |||| ||| ||| || || |||||||||| ||||||| ||||||||    
T  27196217 tagggctgacaatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattgattcgttaaatttggttcatgaaccaaatgagtcgaacttg 27196118  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    || |||||||||||  ||||| | ||| |||||||||||||    
T  27196117 agttgaaaattaagctcgttagataaaggagttgaacttga 27196077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 364
Target Start/End: Original strand, 38522925 - 38523007
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactata 364  Q
    |||||||| |||||||||| ||||||| | ||||||||||||||||||||| ||||||  ||||||| |||||||||||||||    
T  38522925 ttgaacttggttcatgaaccaaatgagccaaacttgagctgaaaattaagttcgttaattaaatgagctgaacttgaactata 38523007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 224 - 367
Target Start/End: Complemental strand, 26299984 - 26299838
Alignment:
Q  224 ggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagc 320  Q
    |||||| | ||||||| ||||  ||||||||||| |||||||||||||   |||| ||| |||||||||  |||||||||  |||||| | ||||||||     
T  26299984 ggctggaaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttcattcatgaacctaatgagtcaaacttgagt 26299885  T
Q  321 tgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    | |||||||||  ||||||| |||||| |||||||||||||| ||||    
T  26299884 ttaaaattaagctcgttaaataaatgaattgaacttgaactaaatat 26299838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 358
Target Start/End: Original strand, 1840740 - 1840827
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||||| | ||||||||| |||||||||| |||||||  |||||||||||||||||||||| ||| ||| ||||||| |||||||||    
T  1840740 caattaactcgttgaacttggttcatgaaccaaatgagctgaacttgagctgaaaattaagttcgtgaaataaatgagctgaacttga 1840827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 26298451 - 26298302
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  || ||||||||  ||||||||||||   |||| ||| |||||||||  |||||||||  |||||| | ||||||    
T  26298451 tagggctggcaatgaaccgaaccaactcaaaaatagtgtgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcaaacttg 26298352  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    || | |||||||||  ||||||| ||||||||||||||| ||||| ||||    
T  26298351 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatat 26298302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 41783411 - 41783325
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||| || ||||||||| |||||||||| ||||||| |||||||||||| || ||||||| ||||||  |||||||||||||||||    
T  41783411 aattagttcgttgaacttggttcatgaaccaaatgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaacttga 41783325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 271 - 367
Target Start/End: Original strand, 19282167 - 19282263
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||| | ||||||||| |||||||||| |||||||  ||||||||||||||||||| || ||||||  | ||||| |||||||||||| |||||    
T  19282167 caattaactcgttgaacttggttcatgaaccaaatgagctgaacttgagctgaaaattaggttcgttaagtagatgagctgaacttgaactgtatat 19282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 367
Target Start/End: Complemental strand, 27906239 - 27906089
Alignment:
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaactt 316  Q
    |||||||||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  || |||  | ||||    
T  27906239 atagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggactt 27906140  T
Q  317 gagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  27906139 gagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 27906089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Original strand, 14500760 - 14500855
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| || ||||||||| |||||||||| ||| ||| |||||||||||| || ||||||| ||||||   ||||||||||||||||  |||||||    
T  14500760 aattagttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactgaatgagttgaacttgagttatatat 14500855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 26218133 - 26218038
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| || ||||||||| |||||||||| ||| ||| |||||||||||| || ||||||| ||||||  ||||||||| |||||||  |||||||    
T  26218133 aattagttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttaaacttgagttatatat 26218038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Original strand, 34723707 - 34723802
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||| ||| |||||||||  |||||||||  |||||| |||| ||||| | |||||||||  ||||||| ||||||||||||||||||||| ||||    
T  34723707 aattgattcgttgaacttgattcatgaacctaatgagtcgaatttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatat 34723802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 355
Target Start/End: Original strand, 34724754 - 34724891
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||| |||| ||||||| ||||  | |||||||||  |||||||||||    |||| ||| |||||||||  |||||||||  |||||| ||||||||    
T  34724754 tagggccggcaatgaaccgaaccaacttgaaaatagtgtgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 34724853  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaact 355  Q
    || | |||||||||  ||||||| ||||||||||||||    
T  34724854 agtttaaaattaagctcgttaaataaatgagttgaact 34724891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 34857487 - 34857338
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||| ||||| ||||||| ||||  |||||||||||  ||||||| ||||   |||| ||| |||||||||  ||||||||   |||||| ||||||||    
T  34857487 tagggttggcaatgaaccgaaccaactcgaaaatagtgtgagattcaattcaataattgattcgttgaacttgattcatgaatctaatgagtcgaacttg 34857388  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    || | |||||||||  ||||||| ||||||||| ||||| ||||| ||||    
T  34857387 agtttaaaattaagctcgttaaataaatgagttaaacttaaactaaatat 34857338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 367
Target Start/End: Complemental strand, 39409206 - 39409131
Alignment:
Q  292 ttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||||  |||||| |||||||||| | |||||||||  ||||||| ||||||||||||||||||||| ||||    
T  39409206 ttcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatat 39409131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 2676083 - 2676009
Alignment:
Q  291 gttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    |||||||||| ||||||| ||||||||||||||||||||||| ||| ||  || | | |||||||||||||||||    
T  2676083 gttcatgaaccaaatgagtcgaacttgagctgaaaattaagttcgtcaactaattaaattgaacttgaactatat 2676009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 348
Target Start/End: Original strand, 32945021 - 32945151
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  ||||||||||||||| | |||||||   |||| ||| ||| ||||| |||||||||| ||||||| ||||||||    
T  32945021 tagggctgacaatgaaccgaaccaactcgaaaatagttcgaaactcgattcggtaattgattcgttaaacttggttcatgaaccaaatgagtcgaacttg 32945120  T
Q  318 agctgaaaattaagtccgttaaacaaatgag 348  Q
    ||   |||||||||  ||| ||| |||||||    
T  32945121 agtcaaaaattaagctcgtcaaataaatgag 32945151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 367
Target Start/End: Original strand, 11136061 - 11136155
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| || ||||||||| ||||| |||| ||| ||| |||||||||||| || ||||||| ||||||  |||||||||||||||||  |||||||    
T  11136061 aattagttcgttgaacttggttca-gaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatat 11136155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 367
Target Start/End: Original strand, 30660961 - 30661056
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||| |||| |||||||| ||||||||||||||||||  ||| || || ||||||||||||  |||||  | |||||| |||| ||||||||||||    
T  30660961 aattgatttattgaacttagttcatgaactaaatgagctgaatttaagttgaaaattaagtttgttaattatatgagtcgaacatgaactatatat 30661056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 362
Target Start/End: Complemental strand, 1225428 - 1225347
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    ||||||||| ||| |||||| ||||||| |||||||||| |||||||||||  ||| ||| ||||||   ||||||||||||    
T  1225428 gttgaacttagtttatgaaccaaatgagtcgaacttgagttgaaaattaagctcgtcaaataaatgaaccgaacttgaacta 1225347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 361
Target Start/End: Complemental strand, 28246798 - 28246729
Alignment:
Q  292 ttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    |||| |||| ||||||| |||||||||| ||||||||||   | ||||| ||||||||||||||||||||    
T  28246798 ttcacgaaccaaatgagtcgaacttgagttgaaaattaaactcattaaataaatgagttgaacttgaact 28246729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 363
Target Start/End: Original strand, 17168499 - 17168590
Alignment:
Q  274 ttaatttgttgaactttgttcatgaactaaatgagacgaacttgagct--gaaaattaagtccgttaaacaaatgagttgaacttgaactat 363  Q
    |||||||||||||||| |||||  ||| ||||||| ||||||| ||||   |||||||| | ||||| | ||| ||||||||||||||||||    
T  17168499 ttaatttgttgaacttggttcacaaaccaaatgagccgaacttaagctcaaaaaattaacttcgttatataaacgagttgaacttgaactat 17168590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 20190650 - 20190698
Alignment:
Q  284 gaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagt 332  Q
    |||||| |||||||||| ||||||| |||||||||||| ||||||||||    
T  20190650 gaacttggttcatgaaccaaatgagccgaacttgagctcaaaattaagt 20190698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 32157031 - 32157083
Alignment:
Q  312 aacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactata 364  Q
    |||||||| |||||||||||| ||||||  ||||||| |||||||||||||||    
T  32157031 aacttgagttgaaaattaagttcgttaattaaatgagctgaacttgaactata 32157083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 363
Target Start/End: Complemental strand, 1091205 - 1091119
Alignment:
Q  276 aatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactat 363  Q
    |||| ||||||||| |||||  ||||||||| | |||||||||| | ||||| |||| | ||||| ||||||||||||||||| ||||    
T  1091205 aattcgttgaacttagttcacaaactaaatgggtcgaacttgagttaaaaat-aagttcattaaataaatgagttgaacttgagctat 1091119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 363
Target Start/End: Complemental strand, 24536093 - 24536002
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactat 363  Q
    |||||||||||||||  | |||||||||  |||||||   || ||||||| |||||||||| ||||||| ||| |||||||| || ||||||    
T  24536093 aattaatttgttgaatctggttcatgaatcaaatgagctaaatttgagctcaaaattaagttcgttaaataaacgagttgaatttaaactat 24536002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 18880269 - 18880183
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||| ||||||||||  || |||  | |||| ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  18880269 gttgaacttggttcatgaacctaacgagctggacttaagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 18880183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 364
Target Start/End: Complemental strand, 15933303 - 15933154
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgatt---caattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||||||||| |||||| |   || |||||| ||||||||| ||||||||||  ||||||  |||| ||    
T  15933303 tagggctggcaatgaaccgaaccaactcgagtatagttcgaaattcgactcgacagttaattcgttgaacttggttcatgaacctaatgagttgaacatg 15933204  T
Q  318 agctgaa---aattaagtccgttaaacaaatgagttgaacttgaactata 364  Q
    |||| ||    ||||||| ||||||| |||||||  |||||||| |||||    
T  15933203 agctaaatactattaagttcgttaaataaatgagccgaacttgagctata 15933154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 24202774 - 24202729
Alignment:
Q  286 actttgttcatgaactaaatgagacgaacttgagctgaaaattaag 331  Q
    |||||||| |||||||||||||  |||||||||| |||||||||||    
T  24202774 actttgttgatgaactaaatgaatcgaacttgagttgaaaattaag 24202729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 7e-25; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 221 - 362
Target Start/End: Original strand, 3081718 - 3081862
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||| ||||||||||||||| | |||||||   ||||  || ||||||||| ||||| |||| ||||||| ||||||||    
T  3081718 tagggctggcaatgaaccgaaccagctcgaaaatagttcgatactcgattcgataattggttcgttgaacttggttcacgaaccaaatgagtcgaacttg 3081817  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    || |||||||||||  ||||||  ||||||| |||||||||||||    
T  3081818 agttgaaaattaagctcgttaattaaatgagctgaacttgaacta 3081862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 247 - 367
Target Start/End: Complemental strand, 6999381 - 6999258
Alignment:
Q  247 tcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaa 343  Q
    |||| ||||||| |||| |||||||   |||||||| ||||||||| ||| ||||||||||||||  ||||||||||||||||||||||  |||||||||    
T  6999381 tcgacaatagtttgagactcgattcgataattaattcgttgaacttggttaatgaactaaatgagctgaacttgagctgaaaattaagtttgttaaacaa 6999282  T
Q  344 atgagttgaacttgaactatatat 367  Q
    ||||  |||||||||||| |||||    
T  6999281 atgaactgaacttgaactttatat 6999258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 221 - 361
Target Start/End: Complemental strand, 13312164 - 13312019
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagat--tcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaact 315  Q
    ||||||||||| ||||||| ||||  ||||||||||||||| ||  |||||||   ||||  ||  ||| |||| |||||||||| ||||||| ||||||    
T  13312164 tagggctggcaatgaaccgaaccaactcgaaaatagttcgatatactcgattcgataattggttcattggacttggttcatgaaccaaatgagtcgaact 13312065  T
Q  316 tgagctgaaaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||    
T  13312064 tgagttgaaaattaagttcgttaaataaatgagttgaacttgaact 13312019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 4441301 - 4441450
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||| |||| ||||||| ||||  |||| |||||||||| | |||||||   |||||  | ||||||||| ||||| ||||||||||||  |||||||    
T  4441301 tagggccggcaatgaaccgaaccaactcgacaatagttcgaaactcgattcgacaattagctcgttgaacttggttcacgaactaaatgagctgaacttg 4441400  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    || |||||||||||| ||||||| ||||||| |||||||||||| |||||    
T  4441401 agttgaaaattaagttcgttaaataaatgagctgaacttgaactgtatat 4441450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 221 - 348
Target Start/End: Complemental strand, 1501988 - 1501858
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgatt---caattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  |||| ||| |||||| | ||||||   ||||||| | ||||||||| |||||||||| ||||||  ||||||||    
T  1501988 tagggctgacaatgaaccgaaccaactcgacaattgttcgaaactcgatttgacaattaactcgttgaacttcgttcatgaaccaaatgaaccgaacttg 1501889  T
Q  318 agctgaaaattaagtccgttaaacaaatgag 348  Q
    ||||||||||||||| ||||||| |||||||    
T  1501888 agctgaaaattaagttcgttaaataaatgag 1501858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 5640252 - 5640401
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  | ||||||  |||||||||   |||| ||| || |||||| |||||||||| ||||||| ||||||||    
T  5640252 tagggctggcaatgaaccgaaccaactcgattagagttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttg 5640351  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    | ||||||||||||| ||| ||  || |||| ||||||||||||||||||    
T  5640352 aactgaaaattaagttcgtcaactaattgagctgaacttgaactatatat 5640401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 10961849 - 10961943
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||| ||| ||||||||| |||||||||| ||||||| |||| |||||||||||||||||| ||| ||  || |||| ||||||||||||||||    
T  10961849 caattgattcgttgaacttggttcatgaaccaaatgagtcgaatttgagctgaaaattaagttcgtcaactaattgagctgaacttgaactatat 10961943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 362
Target Start/End: Complemental strand, 7437444 - 7437300
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaattaa---tttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||| | ||||||| || |  ||||||||||||||| | ||||||| || |    || ||||||||| ||||| |||| ||||||| |||||||     
T  7437444 tagggctggtaatgaaccgaactaactcgaaaatagttcgatactcgattcgataatgggttcgttgaacttggttcacgaaccaaatgagtcgaacttt 7437345  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    || |||||||||||  ||||||| ||||||| |||||||||||||    
T  7437344 agttgaaaattaagctcgttaaataaatgagctgaacttgaacta 7437300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 348
Target Start/End: Complemental strand, 17441298 - 17441168
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||| ||||| ||||||| ||||   |||||||||||||| | ||||||    |||||||| ||||||||| |||||||||| |||||||  |||||||    
T  17441298 tagggttggcaatgaaccgaaccaacccgaaaatagttcgaaactcgatttggtaattaattcgttgaacttagttcatgaaccaaatgagttgaacttg 17441199  T
Q  318 agctgaaaattaagtccgttaaacaaatgag 348  Q
    || |||||||||||  ||| ||| |||||||    
T  17441198 agttgaaaattaagctcgtcaaataaatgag 17441168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 365
Target Start/End: Original strand, 9950826 - 9950907
Alignment:
Q  284 gaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    |||||| |||||||||| ||||||| |||||||||| |||||||||||| ||| ||  || |||| ||||||||| ||||||    
T  9950826 gaacttggttcatgaaccaaatgagccgaacttgagttgaaaattaagttcgtcaactaattgagctgaacttgagctatat 9950907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 358
Target Start/End: Complemental strand, 10346861 - 10346721
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||  ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  || |||  | |||||    
T  10346861 tagggctggcaatgaaccaaaccaaatcgattatagttcgacattcgactctatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 10346762  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||||||||||||| ||||||  ||||||| |||||||||    
T  10346761 agctgaaaattaagttcgttaattaaatgagctgaacttga 10346721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 22296002 - 22295907
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| ||| || ||||| |||||||||| ||| ||| |||||||||||| || ||||||| ||||||  ||||| |||||| ||||  |||||||    
T  22296002 aattagtttattaaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaagtaaatgtgttgaatttgagttatatat 22295907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 362
Target Start/End: Original strand, 27984943 - 27985034
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    ||||| ||| || |||||| ||| |||||| ||||||| ||||||||| |||||||||||||  || ||  || |||| |||||||||||||    
T  27984943 caattgattcgtcgaacttggtttatgaaccaaatgagccgaacttgaactgaaaattaagtttgtaaactaattgagctgaacttgaacta 27985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 367
Target Start/End: Complemental strand, 8200683 - 8200633
Alignment:
Q  317 gagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||||||||||| ||||||  ||||||||||||||||| ||| ||||    
T  8200683 gagctgaaaattaagttcgttaattaaatgagttgaacttgagctacatat 8200633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 12428929 - 12428880
Alignment:
Q  316 tgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||||||||||||||| ||||||| |||||||  |||||||| ||||||    
T  12428929 tgagctgaaaattaagttcgttaaataaatgagccgaacttgagctatat 12428880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 358
Target Start/End: Original strand, 21093270 - 21093384
Alignment:
Q  247 tcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaa 343  Q
    |||||| ||||| ||||||||||||    ||||||| ||||||||| |||| | ||  ||||||  |||||||||| ||||||| ||   ||||||||||    
T  21093270 tcgaaagtagtttgagattcgattctttgattaattcgttgaacttagttcgtaaatcaaatgactcgaacttgagttgaaaatcaatctcgttaaacaa 21093369  T
Q  344 atgagttgaacttga 358  Q
     |||||| |||||||    
T  21093370 ctgagttaaacttga 21093384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 367
Target Start/End: Complemental strand, 32163628 - 32163532
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||| | ||||||| | ||||||||||  ||||||   |||||||| |||||||||||| ||||||  ||||||| | ||||||| | ||||||    
T  32163628 caattaactggttgaacatggttcatgaacctaatgagctaaacttgagttgaaaattaagttcgttaactaaatgagcttaacttgagccatatat 32163532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 220 - 358
Target Start/End: Complemental strand, 21228 - 21088
Alignment:
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaactt 316  Q
    ||||||||| || ||||||| ||||  ||||||||||||||||| |||||||   |||| ||| ||||||||| |||||||||| ||| ||| |||||||    
T  21228 atagggctgacaatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattgattcgttgaacttggttcatgaaccaaa-gagtcgaactt 21130  T
Q  317 gagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||| |||||||||||  | ||||| |||||||||||||||||    
T  21129 gagttgaaaattaagctcattaaataaatgagttgaacttga 21088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 3409188 - 3409337
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  |||| |||||||||| | |||||||   |||||| | ||||||||| |||||||||| ||||||   |||||||    
T  3409188 tagggctggcaatgaaccgaaccaactcgacaatagttcgaaactcgattcgacaattaactcgttgaacttggttcatgaaccaaatgaactgaacttg 3409287  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||| ||||||| |||| |||| || |||||    
T  3409288 agctgaaaattaagttcgttaaataaatgagctgaatttgagctgtatat 3409337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 224 - 367
Target Start/End: Original strand, 44740486 - 44740632
Alignment:
Q  224 ggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagc 320  Q
    |||||||| ||||||| ||||  |||| ||||||| | || |||||||   |||||| | ||||||||| |||||||||| ||| |||  ||||||||||    
T  44740486 ggctggcaatgaaccgaaccaactcgacaatagtttgggactcgattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttgagc 44740585  T
Q  321 tgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    | |||||||||| ||||||||||||||| ||||||||| || |||||    
T  44740586 taaaaattaagttcgttaaacaaatgagctgaacttgagctttatat 44740632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 362
Target Start/End: Complemental strand, 40459061 - 40458917
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaattaat---ttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||  | |||||||||| || | |||||||||| | |   ||||||||||| ||||| |||| ||||||| ||||||||    
T  40459061 tagggctgacaatgaaccgaaccaacttgaaaatagtttgatactcgattcaataattggtttgttgaacttggttcacgaaccaaatgagtcgaacttg 40458962  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    || |||||||||||  ||||||| ||||||| |||||||||||||    
T  40458961 agttgaaaattaagctcgttaaataaatgagctgaacttgaacta 40458917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 359
Target Start/End: Original strand, 27464571 - 27464713
Alignment:
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaactt 316  Q
    ||||||||| || ||||||| ||||  ||||||||||||||||| | |||||   |||| |||||||||| || |||||||||| ||||||| |||||||    
T  27464571 atagggctgacaatgaaccgaaccaactcgaaaatagttcgagacttgattcgataattgatttgttgaatttggttcatgaaccaaatgagtcgaactt 27464670  T
Q  317 gagctgaaaattaagtccgttaaacaaatgagttgaacttgaa 359  Q
    ||  |||||||||||| |  |||| ||| |||||| |||||||    
T  27464671 gaattgaaaattaagttccctaaataaaggagttggacttgaa 27464713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 272 - 359
Target Start/End: Original strand, 11007026 - 11007113
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaa 359  Q
    |||| ||| ||||||||| ||||| |||| ||||||| |||||||||| |||||||||||  ||||||| ||||||||||||||||||    
T  11007026 aattgattcgttgaacttggttcacgaaccaaatgagtcgaacttgagttgaaaattaagctcgttaaataaatgagttgaacttgaa 11007113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 365
Target Start/End: Original strand, 34116227 - 34116320
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    |||| |||||| |||||| |||||||||| ||||||| |||||||||||| |||||||||| || |||| || |||| ||||||||| ||||||    
T  34116227 aattgatttgtcgaacttagttcatgaaccaaatgagccgaacttgagcttaaaattaagttcgctaaataattgagctgaacttgagctatat 34116320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 271 - 367
Target Start/End: Complemental strand, 2578166 - 2578070
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||| |||||||||||  ||||||||  |||||||  |||||||||||||||||||| | ||||||| ||||||||| ||||| | ||||||||    
T  2578166 caattaacttgttgaacttgattcatgaatcaaatgagctgaacttgagctgaaaattaaattcgttaaataaatgagttaaacttaagctatatat 2578070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 367
Target Start/End: Original strand, 2647028 - 2647123
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| || ||||||||| |||||||||| ||| ||| |||||||||||| |||||||||| ||||||  |||| ||||||||||||  |||||||    
T  2647028 aattagttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaaaattaagttcgttaactaaataagttgaacttgagttatatat 2647123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 12070537 - 12070659
Alignment:
Q  244 agttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaa 340  Q
    ||||||||||||||| |||| || ||||   |||||||| |||||| ||  ||| | ||||||||||  |||||||||| |||||||||| | |||||||    
T  12070537 agttcgaaaatagtttgagactcaattcggtaattaattcgttgaatttgattcgtcaactaaatgaatcgaacttgagttgaaaattaaattcgttaaa 12070636  T
Q  341 caaatgagttgaacttgaactat 363  Q
    ||||| |||| ||||| ||||||    
T  12070637 caaataagttaaacttaaactat 12070659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Original strand, 2328345 - 2328440
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||| ||| |||||| |||||||  |||||||| | |||||||| ||||||||||  || | ||| |||||||||||||||||| |||||||    
T  2328345 aattaattcgttaaactttattcatgatttaaatgagtcaaacttgagttgaaaattaaacccttcaaataaatgagttgaacttgaattatatat 2328440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 356
Target Start/End: Original strand, 24844729 - 24844804
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaactt 356  Q
    ||||||||| |||||||||| |||||||  |||||||||||||||||||| | || |||| ||||||| |||||||    
T  24844729 gttgaacttggttcatgaaccaaatgagctgaacttgagctgaaaattaaattcgataaataaatgagctgaactt 24844804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 27634811 - 27634662
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  || |||  | |||||    
T  27634811 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttagttcatgaacctaacgagctggacttg 27634712  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  27634711 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 27634662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 365
Target Start/End: Complemental strand, 30713230 - 30713149
Alignment:
Q  284 gaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    |||||| |||||||||| ||||||| ||||| |||||||||| |||||| ||| ||  || |||||||||||||| ||||||    
T  30713230 gaacttggttcatgaaccaaatgagccgaacatgagctgaaatttaagttcgtcaactaattgagttgaacttgagctatat 30713149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 1094533 - 1094457
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||| || |||||||||| ||||||| |||||||||| |||||||||||  |||| || |||||||| ||||||||    
T  1094533 ttgaatttggttcatgaaccaaatgagtcgaacttgagttgaaaattaagctcgttgaataaatgagtcgaacttga 1094457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 38409644 - 38409720
Alignment:
Q  291 gttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||||| ||||||| |||||||||||||||||||||||  || ||  || |||| ||||||| ||||||||||    
T  38409644 gttcatgaaccaaatgagccgaacttgagctgaaaattaagtttgtgaactaattgagctgaactttaactatatat 38409720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 33831635 - 33831486
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  |||||| || ||||||||||  || |||  | |||||    
T  33831635 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaatttggttcatgaacctaacgagctggacttg 33831536  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  33831535 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 33831486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 367
Target Start/End: Complemental strand, 34064813 - 34064696
Alignment:
Q  253 atagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagt 349  Q
    ||||||||| |||||| |||||   ||||  ||||||||| ||||||||||  || |||  | |||||||||||||||||||| ||||||  |||||||     
T  34064813 atagttcgacattcgactcaatatctaatccgttgaacttagttcatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaatgagc 34064714  T
Q  350 tgaacttgaactatatat 367  Q
    ||||||||| ||| ||||    
T  34064713 tgaacttgagctacatat 34064696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 26436431 - 26436345
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||| ||||||||||  || |||  |||| ||||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  26436431 gttgaacttggttcatgaacctaacgagctgaacgtgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 26436345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 27902492 - 27902585
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||| ||| || |||||| |||||||||| ||||||  ||||||||||||||||||||| | ||| ||  || |||||||||||||| ||||||    
T  27902492 caattgattcgtcgaacttggttcatgaacaaaatgaaccgaacttgagctgaaaattaaat-cgtcaactaattgagttgaacttgagctatat 27902585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 29807046 - 29806950
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaac 314  Q
    ||||||||||| ||||||| |||| |||||||||||||| ||| |||||||   |||| ||| ||||||||| ||| | |||| ||||||| |||||    
T  29807046 tagggctggcaatgaaccgaaccaattcgaaaatagttcaagactcgattcgataattgattcgttgaacttggtttacgaaccaaatgagccgaac 29806950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 367
Target Start/End: Complemental strand, 9753212 - 9753098
Alignment:
Q  255 agttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttg 351  Q
    |||||||||||||||||   |||| ||| ||| |  || |||||||||| |||||||| |||| ||| || |||||||||||||  ||  ||||||||||    
T  9753212 agttcgagattcgattcgacaattgattcgttaagtttggttcatgaaccaaatgagaagaacgtgaact-aaaattaagtccggcaactaaatgagttg 9753114  T
Q  352 aacttgaactatatat 367  Q
    ||||||| ||||||||    
T  9753113 aacttgagctatatat 9753098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 41332345 - 41332243
Alignment:
Q  247 tcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaa 343  Q
    ||||| ||||||||| | |||||||   |||||| ||||||||||| |||||| ||| || ||||  ||| ||||||||||||||||||  |||||| ||    
T  41332345 tcgaatatagttcgaaactcgattcgacaattaacttgttgaacttggttcataaaccaattgagttgaatttgagctgaaaattaagtttgttaaataa 41332246  T
Q  344 atg 346  Q
    |||    
T  41332245 atg 41332243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 359
Target Start/End: Complemental strand, 13829964 - 13829877
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaa 359  Q
    |||| ||| ||||||||| |||||| ||| |||||||  ||||||||| | ||||||||   ||||||  ||||||||||||||||||    
T  13829964 aattgattcgttgaacttggttcataaaccaaatgagttgaacttgagttaaaaattaaactcgttaattaaatgagttgaacttgaa 13829877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 14103353 - 14103258
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||| | ||| ||||| |||||||| | |||| || ||||||| | ||||||||||||| ||||||  |||||||  |||||| ||||||||||    
T  14103353 aattaactcgtttaacttggttcatgagccaaataagtcgaacttaaactgaaaattaagttcgttaattaaatgagcagaacttaaactatatat 14103258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 20203767 - 20203825
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaatta 329  Q
    ||||| ||| ||||||||| |||||||||| ||||||| | ||| ||||||||||||||    
T  20203767 caattgattcgttgaacttggttcatgaaccaaatgagtcaaacctgagctgaaaatta 20203825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 36538733 - 36538647
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||| ||||||||||  || |||  | |||||||||||||||||||| ||||||  ||||||| | ||||||| ||| ||||    
T  36538733 gttgaacttggttcatgaacctaacgagttggacttgagctgaaaattaagttcgttaattaaatgagctaaacttgagctacatat 36538647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Complemental strand, 39690216 - 39690163
Alignment:
Q  312 aacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||||||||||||||||||| ||| ||  || |||||||||||||| ||||||    
T  39690216 aacttgagctgaaaattaagttcgtcaactaattgagttgaacttgagctatat 39690163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 348
Target Start/End: Original strand, 33163992 - 33164110
Alignment:
Q  233 tgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaatta 329  Q
    ||||||| |||| |||||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  || |||  | |||||||||||||||||    
T  33163992 tgaaccgaaccaattcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttgagctgaaaatta 33164091  T
Q  330 agtccgttaaacaaatgag 348  Q
    ||| ||||||  |||||||    
T  33164092 agttcgttaattaaatgag 33164110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 3308074 - 3307925
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  |||| |||||||||  | |||||||   |||||| | || |||||| |||||||||| ||||||| ||||||||    
T  3308074 tagggctggcaatgaaccgaaccaactcgacaatagttcggaactcgattcgacaattaactcgtagaacttagttcatgaaccaaatgagccgaacttg 3307975  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||| ||||||||||| ||||||| |||||||  |||||||| || |||||    
T  3307974 agcagaaaattaagttcgttaaataaatgagccgaacttgagctgtatat 3307925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 250 - 358
Target Start/End: Complemental strand, 1091838 - 1091727
Alignment:
Q  250 aaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatg 346  Q
    ||||||||| |||| |||||||   |||||||| |||||||||  ||||||||| ||| ||| ||||| |||| | |||||||||| ||| |||||||||    
T  1091838 aaaatagtttgagactcgattcgataattaattcgttgaacttgattcatgaaccaaacgagtcgaacctgagtttaaaattaagttcgtcaaacaaatg 1091739  T
Q  347 agttgaacttga 358  Q
    ||||||||||||    
T  1091738 agttgaacttga 1091727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 27189148 - 27189222
Alignment:
Q  284 gaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||||||| ||| ||  || ||||||||||||||    
T  27189148 gaacttggttcatgaaccaaatgagtcgaacttgagctgaaaattaagttcgtcaactaattgagttgaacttga 27189222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 321
Target Start/End: Complemental strand, 43384922 - 43384831
Alignment:
Q  233 tgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagct 321  Q
    ||||||| ||||  |||||||||||||||||||||||||   |||||||| |||||| || |||||||||| |||||||  |||||||||||    
T  43384922 tgaaccgaaccaactcgaaaatagttcgagattcgattcgataattaattcgttgaagttggttcatgaaccaaatgagttgaacttgagct 43384831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 453623 - 453474
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||  ||||||||| ||||||||||  || |||  | |||||    
T  453623 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 453524  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    || |||||||||||| ||||||  ||||||||||||||||| ||| ||||    
T  453523 agttgaaaattaagttcgttaattaaatgagttgaacttgagctacatat 453474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 34655121 - 34655026
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| |||||||||||| |||||||||| ||| ||| |||||||||||| || |||||||  |||||  ||||||||| |||||||  |||||||    
T  34655121 aattagtttgttgaacttagttcatgaaccaaacgagtcgaacttgagctaaagattaagtttgttaactaaatgagttaaacttgagttatatat 34655026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 43967596 - 43967501
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| || |||||| || |||||||||| ||| ||| |||||||||||| || ||||||| ||||||  |||||||||||||||||  |||||||    
T  43967596 aattagttcgttgaatttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatat 43967501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 23181222 - 23181151
Alignment:
Q  291 gttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaacta 362  Q
    |||||||||| ||||||| ||||||||| ||||||||||||| ||| ||  || |||| |||||||||||||    
T  23181222 gttcatgaaccaaatgagccgaacttgaactgaaaattaagttcgtaaactaattgagctgaacttgaacta 23181151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 365
Target Start/End: Complemental strand, 34516214 - 34516131
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||||||  ||||| ||| ||||||| ||||||||||||||||||||||| |||  |  || |||| ||||||||||||||||    
T  34516214 ttgaacttgattcatcaaccaaatgagccgaacttgagctgaaaattaagttcgtcgattaattgagctgaacttgaactatat 34516131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 11161649 - 11161563
Alignment:
Q  281 gttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||| ||||||||||  || |||  | |||||||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  11161649 gttgaacttggttcatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 11161563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 365
Target Start/End: Original strand, 33280043 - 33280124
Alignment:
Q  284 gaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    |||||| |||||||||| ||||||| ||||  |||||| |||||||||| ||| ||  || |||| ||||||||||||||||    
T  33280043 gaacttggttcatgaaccaaatgagccgaatatgagcttaaaattaagttcgtcaactaattgagctgaacttgaactatat 33280124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 13667432 - 13667492
Alignment:
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatattcttcgacatg 378  Q
    |||| ||||| ||||| ||||| ||||| |||||||||||||||||||||  |||||||||    
T  13667432 agctaaaaatcaagtctgttaatcaaataagttgaacttgaactatatataattcgacatg 13667492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 13726707 - 13726767
Alignment:
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatattcttcgacatg 378  Q
    |||| ||||| ||||| ||||| ||||| |||||||||||||||||||||  |||||||||    
T  13726707 agctaaaaatcaagtctgttaatcaaataagttgaacttgaactatatataattcgacatg 13726767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 7374 - 7457
Alignment:
Q  284 gaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||||||| || |||  || |||| ||||||||||| ||||||    
T  7374 gaacttggttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgctaactaattgagctgaacttgaaccatatat 7457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 359
Target Start/End: Original strand, 51314 - 51443
Alignment:
Q  233 tgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaatta 329  Q
    ||||||| || || ||||||||||||||||||||| |||   || ||||| ||||||||| |||| ||||| ||||||| ||||| |||  | |||||||    
T  51314 tgaaccgaactagctcgaaaatagttcgagattcggttcggtaaataattcgttgaacttagttcgtgaaccaaatgagtcgaacgtgattttaaaatta 51413  T
Q  330 agtccgttaaacaaatgagttgaacttgaa 359  Q
    ||   |||||| ||||||||||||||||||    
T  51414 agcttgttaaataaatgagttgaacttgaa 51443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 358
Target Start/End: Original strand, 778 - 907
Alignment:
Q  220 atagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaattaatttgttgaactttgttcatgaactaaatgagacgaacttgag 319  Q
    ||||||||| || ||||||| |||| ||||||||||||| |||| |||||||         ||||||||| |||||||||| |||||||  ||| ||| |    
T  778 atagggctgccaatgaaccgaaccaattcgaaaatagtttgagactcgattc---------gttgaacttggttcatgaaccaaatgagttgaatttggg 868  T
Q  320 ctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
     |||||||||||  ||||||| |||||||||||||||||    
T  869 ttgaaaattaagctcgttaaataaatgagttgaacttga 907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 365
Target Start/End: Original strand, 26680 - 26768
Alignment:
Q  277 atttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatat 365  Q
    ||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||| ||| ||  || |||| ||||||| | ||||||    
T  26680 atttgttgaacttggttcatgaatcaaatgagtcgaacttgagctgaaaattaagttcgtcaactaattgagctgaacttaagctatat 26768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 11555 - 11460
Alignment:
Q  272 aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    |||||||| |||||||||  |||||  || ||||||| ||||||| || |||||||||||| ||||||  ||||||| |||| |||||||||||||    
T  11555 aattaattcgttgaacttgattcatataccaaatgagccgaacttcagatgaaaattaagttcgttaattaaatgagctgaatttgaactatatat 11460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 10076 - 9981
Alignment:
Q  271 caattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatata 366  Q
    ||||||||| |||||| ||  |||||| || ||||||| ||||||| || |||||||||||| ||||||  ||||||| |||| ||| ||||||||    
T  10076 caattaattcgttgaatttgattcatgtaccaaatgagccgaacttaagatgaaaattaagttcgttaattaaatgagctgaatttgtactatata 9981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 364
Target Start/End: Original strand, 124545 - 124627
Alignment:
Q  282 ttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactata 364  Q
    |||||||| |||||||||| ||||||| ||||||||||||||  |||||||  |||||  ||||||| |||| ||||||||||    
T  124545 ttgaacttggttcatgaaccaaatgagtcgaacttgagctgattattaagtttgttaattaaatgagctgaatttgaactata 124627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 358
Target Start/End: Complemental strand, 96408 - 96280
Alignment:
Q  233 tgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaatta 329  Q
    ||||||| || || ||||||||||||||||||||| |||   || |||||  ||||||||  ||| ||||| ||||||| | ||||| || | |||||||    
T  96408 tgaaccgaactagctcgaaaatagttcgagattcggttcgttaaataattcattgaacttaattcgtgaaccaaatgagtccaacttaagttcaaaatta 96309  T
Q  330 agtccgttaaacaaatgagttgaacttga 358  Q
    ||  ||||||| |||||||||||||||||    
T  96308 agctcgttaaataaatgagttgaacttga 96280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 275 - 367
Target Start/End: Original strand, 25623 - 25714
Alignment:
Q  275 taatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||| ||||||||| ||| ||||   ||||||| ||||||| | ||||||||||||||||||||  ||||||| |||||||||| |||||||    
T  25623 taattcgttgaacttggtttatgagtcaaatgag-cgaacttaaactgaaaattaagtccgttaattaaatgagatgaacttgaattatatat 25714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 32791 - 32926
Alignment:
Q  227 tggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttgagctga 323  Q
    ||||| ||||||| ||||  ||||||||||||||| | |||||||   ||||  || ||||||||| |||||   || ||||||| |||||||||| ||     
T  32791 tggcaatgaaccgaaccaactcgaaaatagttcgatactcgattcgacaattggttcgttgaacttggttcac--accaaatgagtcgaacttgagttgt 32888  T
Q  324 aaattaagtccgttaaacaaatgagttgaacttgaact 361  Q
    ||||||||  ||||||| |||||| |||||||||||||    
T  32889 aaattaagctcgttaaataaatgaattgaacttgaact 32926  T

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Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 19436 - 19287
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattcaat---taatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    ||||||||||| ||||||| ||||  ||||  ||||||||| |||||| || ||   ||||   |||||||| ||||||||||  || |||  | |||||    
T  19436 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatcctttgaacttggttcatgaacctaacgagctggacttg 19337  T
Q  318 agctgaaaattaagtccgttaaacaaatgagttgaacttgaactatatat 367  Q
    ||||||||||||||| ||||||  ||||||| ||||||||| ||| ||||    
T  19336 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatat 19287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 358
Target Start/End: Original strand, 241 - 324
Alignment:
Q  275 taatttgttgaactttgttcatgaactaaatgagacgaacttgagctgaaaattaagtccgttaaacaaatgagttgaacttga 358  Q
    ||||| |||| |||| ||||||||||  ||| || |||||||||| | | |||||||| ||||||  |||||||||||||||||    
T  241 taattcgttggacttggttcatgaacctaattagccgaacttgagttaagaattaagttcgttaattaaatgagttgaacttga 324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 348
Target Start/End: Complemental strand, 14566 - 14436
Alignment:
Q  221 tagggctggcagtgaaccgtaccagttcgaaaatagttcgagattcgattc---aattaatttgttgaactttgttcatgaactaaatgagacgaacttg 317  Q
    |||||||| || ||||||| ||||   |||||||||||||| | |||||||   |||| |||  |||||||| |||||||||| ||||||   |||||||    
T  14566 tagggctgacaatgaaccgaaccaacccgaaaatagttcgaaactcgattcggtaattgattcattgaacttggttcatgaaccaaatgatttgaacttg 14467  T
Q  318 agctgaaaattaagtccgttaaacaaatgag 348  Q
    ||  ||||||||||  ||| ||| |||||||    
T  14466 agtcgaaaattaagctcgtcaaataaatgag 14436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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