View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_low_76 (Length: 347)
Name: NF17763_low_76
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_low_76 |
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Alignment Details
Target: chr7 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 17 - 343
Target Start/End: Complemental strand, 29931281 - 29930955
Alignment:
| Q |
17 |
caaattgtacaaaagtgcttttgattttagaatcagtgaacaaaaattagacaacacacaatttcaaatgcttgtggaaacaaaggaatgaaaccagaat |
116 |
Q |
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| T |
29931281 |
caaattgtacaaaaatgcttttgattttagaatcagtgaacaaaaattagacaacacacaatttcaaatgcttgtggaaacaaaggaatgaaaccagaat |
29931182 |
T |
|
| Q |
117 |
ttgatgatgcaagatctataaataaacttgaaggagaaagaggagtgaacacaattgattgttaaagaaattcagagcaatgtgctcctacatctctgag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29931181 |
ttgatgatgcaagatctataaataaacttgaaggagaaagaggagtcaacacaattgattgttaaagaaattcagagcaatgtgctcctacatctctgag |
29931082 |
T |
|
| Q |
217 |
gtagcatcctactgcaaaaaacactgaatttgagggtttaaaccttaatcttcaggcatgattcaacaaggaatcatccagaatctctcagtgatatcct |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29931081 |
gtagcatcctactgcaaaaaacactgaatttgagggtttaaaccttaatcttcaggcatgattcaacaaggaatcatccagaatctctcagtgatatcct |
29930982 |
T |
|
| Q |
317 |
ctcttggtttattttttcttctctctc |
343 |
Q |
| |
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||||||||||||||||||||||||||| |
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| T |
29930981 |
ctcttggtttattttttcttctctctc |
29930955 |
T |
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