View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17763_low_81 (Length: 339)
Name: NF17763_low_81
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_low_81 |
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Alignment Details
Target: chr2 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 19 - 334
Target Start/End: Original strand, 17120704 - 17121019
Alignment:
| Q |
19 |
taagtttagtcccggatcaatttttgtgtgaatccctcacatttttaaactttgtacataaatgtgggagagagtcgataatcgatcgaccatcaataag |
118 |
Q |
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| T |
17120704 |
taagtttagtcccggatcaatttttgtgtgaatccctcacatttttaaattttgtacataaatgtgggagagagtcgataatcgatcgaccatcaataag |
17120803 |
T |
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| Q |
119 |
tctttacaagagattataaaagatcacaaaaaattaaccttatttgttcaagatgaacaatcgctcatgttttctcccaatccttgataattttcattat |
218 |
Q |
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| T |
17120804 |
tctttacaagagattataaaagatcacaaaaaattaaccttatttgttcaagatgaacaatctctcatgttttctcccaatccttgataattttcattat |
17120903 |
T |
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| Q |
219 |
atgattcaattgagaaggattgaatcctctccgtaatgattgttaattactcaagatgctcactatttgtttcccaacactaagaaatttttatcccttt |
318 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17120904 |
atgactcaattgagaaggattgaatcctctccgtaatgattgttaattactcaagatgctcactatttgtttcccaacactaagaaatttttatcccttt |
17121003 |
T |
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| Q |
319 |
gcattcctatgcttct |
334 |
Q |
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||||||| ||| |||| |
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| T |
17121004 |
gcattcccatgtttct |
17121019 |
T |
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