View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17763_low_87 (Length: 318)
Name: NF17763_low_87
Description: NF17763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17763_low_87 |
 |  |
|
| [»] scaffold0667 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr2 (Bit Score: 297; Significance: 1e-167; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 9329121 - 9329425
Alignment:
| Q |
1 |
aagaatgttagggatagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtcccta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9329121 |
aagaatgttagggatagcaagaggtaggaaagggataatacgatgtttacgggtgttagggttccagattgtgatttcgttggggccgttagggtcccta |
9329220 |
T |
 |
| Q |
101 |
aaagcgatttggccataggagatagcaatgaggccgttgcatgaaccgataagagccatgttgctgttacgcgtgacaggagcaatgttggtgctgaaag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9329221 |
aaagcgatttggccataggagatagcaatgaggccgttgcatgaaccgataagacccatgttgctgttacgcgtgacaggagcaatgttggtgctgaaag |
9329320 |
T |
 |
| Q |
201 |
gatggttgagtggaatcatggatttggttagattaggaagatcgagttggtagagatcggtattgagctgaaggatgaggttgaaattgagggaattatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9329321 |
gatggttgagtggaatcatggatttggttagattaggaagatcgagttggtagagatcggtattgagctgaaggatgaggttgaaattgagggaattatt |
9329420 |
T |
 |
| Q |
301 |
tttga |
305 |
Q |
| |
|
||||| |
|
|
| T |
9329421 |
tttga |
9329425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 9316550 - 9316774
Alignment:
| Q |
1 |
aagaatgttagggatagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtcccta |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| | | | |
|
|
| T |
9316550 |
aagaatgttagggatagcaagaggaaggaaagggataatacgatgtttacgggtgttagggttccagattgtgatttcgttggcgccgtaaggatgcatg |
9316649 |
T |
 |
| Q |
101 |
aaagcgatttggccataggagatagcaatgaggccgttgcatgaaccgataagagccatgttgctgttacgcgtgacaggagcaatgttggtgctgaaag |
200 |
Q |
| |
|
||||||||||| |||| ||| || || | |||||||| |||||||||| ||||||||| |||||||| |||||||||||| ||| |||||| |
|
|
| T |
9316650 |
aaagcgatttgaccattggaaatggcgagaaggccgttacatgaaccgagaagagccattatgctgttatacgtgacaggagc------tgtgttgaaag |
9316743 |
T |
 |
| Q |
201 |
gatggttgagtggaatcatggatttggttag |
231 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |
|
|
| T |
9316744 |
gatggttgagtggaatcatggatttcgttag |
9316774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 295
Target Start/End: Complemental strand, 9283795 - 9283504
Alignment:
| Q |
4 |
aatgttagggatagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtccctaaaa |
103 |
Q |
| |
|
|||||||||||||| |||||| || ||||||||||| | || |||||||||||||| |||||||||||||||||| | | | |||| || | | ||||| |
|
|
| T |
9283795 |
aatgttagggataggaagagggagaaaagggataatccaatgtttacgggtgttagtgttccagattgtgatttcagttgcgtcgtttggatgcgtaaaa |
9283696 |
T |
 |
| Q |
104 |
gcgatttggccataggagatagcaatgaggccgttgcatgaaccgataagagccatgttgctgttacgcgtgacaggagcaatgttggtgctgaaaggat |
203 |
Q |
| |
|
|| ||| |||||| | |||| || | ||||||||| |||||||| ||||||||| || |||||||| |||||| |||| | ||||||||| ||||||||| |
|
|
| T |
9283695 |
gcaattgggccattgtagatggcgaggaggccgttacatgaaccaataagagccttgatgctgttaagcgtgaaaggatcgatgttggtggtgaaaggat |
9283596 |
T |
 |
| Q |
204 |
ggttgagtggaatcatggatttggttagattaggaagatcgagttggtagagatcggtattgagctgaaggatgaggttgaaattgagggaa |
295 |
Q |
| |
|
||||||| || || |||||||||||||| ||||| | ||||||||||||||||| ||| ||| | | |||||||| ||||| ||||||||| |
|
|
| T |
9283595 |
ggttgagcggtattatggatttggttaggttagggaaatcgagttggtagagattggtcttgtgacggaggatgagtttgaagttgagggaa |
9283504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 297
Target Start/End: Original strand, 9275044 - 9275344
Alignment:
| Q |
2 |
agaatgttagggatagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtccctaa |
101 |
Q |
| |
|
||||||||||| |||| |||||| || ||||||||||| |||| ||||| ||||||||||||||||||||| ||||| || | ||| ||| | ||| | |
|
|
| T |
9275044 |
agaatgttaggtataggaagagggagaaaagggataatccgatgtttaccggtgttagggttccagattgtaatttcatttgcatcgtcaggatgcctga |
9275143 |
T |
 |
| Q |
102 |
aagcgatttggccataggagatagcaatgaggccgttgcatgaaccgataagagccatgttgctgttacgcgtgacaggagcaatg----ttggtgctga |
197 |
Q |
| |
|
| ||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||| || | || || ||| | |||| |
|
|
| T |
9275144 |
aggcggtttggccattggagatagcaatgaggccgttacatgaacctataagagccatggtgctgttacgcgtgaaagaatcattgttgcttgctactga |
9275243 |
T |
 |
| Q |
198 |
aaggatggttgagtggaatcatggatttggttagattaggaagatcgagttggtagag-atcggtattgagctgaaggatgaggttgaaattgagggaat |
296 |
Q |
| |
|
|||||||||||||| | || ||| |||||||||| ||||| | || ||||| |||||| | ||| ||| | ||||| |||||||||||||||||||||| |
|
|
| T |
9275244 |
aaggatggttgagttgtattatgaatttggttaggttagggaaattgagttcgtagagtttgggtgttgtgttgaagaatgaggttgaaattgagggaat |
9275343 |
T |
 |
| Q |
297 |
t |
297 |
Q |
| |
|
| |
|
|
| T |
9275344 |
t |
9275344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 9357703 - 9357880
Alignment:
| Q |
2 |
agaatgttagggatagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtccctaa |
101 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||| ||| ||||||| ||||| |||||||||||| ||||||||||| | ||||||| | ||| | |
|
|
| T |
9357703 |
agaatgttagggataggaagagggaggaaagggataatgtgatgtttacggatgttatggttccagattgagatttcgttggcggcgttaggatgcctga |
9357802 |
T |
 |
| Q |
102 |
aagcgatttggccataggagatagcaatgaggccgttgcatgaaccgataagagccatgt---tgctgttacgcgtga |
176 |
Q |
| |
|
||||||||| ||||| |||||| || | ||||||||| |||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
9357803 |
aagcgatttcgccattggagatggcgaggaggccgttacatgaaccgataagagaaatgttggtgctgttacgcgtga |
9357880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 219
Target Start/End: Original strand, 9321501 - 9321722
Alignment:
| Q |
4 |
aatgttagggatagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtccctaaaa |
103 |
Q |
| |
|
||||| |||||||| |||||||||||||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||||| |||||| | | ||| |
|
|
| T |
9321501 |
aatgtcagggataggaagaggtaggaaagggatcatacgatgcttacgagtgctagggttccagattgtgatttcgttggggttgttaggatgattgaaa |
9321600 |
T |
 |
| Q |
104 |
gcgatttggccataggagatagcaatgaggccgttgcatgaaccgataagagccatgttgctg------ttacgcgtgacaggagcaatgttggtgctga |
197 |
Q |
| |
|
|| | |||||| | |||||| || | ||||||||| || |||||||||||||||||| | ||| ||||| |||||||||| || |||||| ||| |
|
|
| T |
9321601 |
gccagttggccgtgggagatggcgaggaggccgttacaggaaccgataagagccatggttctggttctattacgtgtgacaggagtgattttggtggtga |
9321700 |
T |
 |
| Q |
198 |
aaggatggttgagtggaatcat |
219 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
9321701 |
aaggatggttgagtggaatcat |
9321722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 10353644 - 10353838
Alignment:
| Q |
2 |
agaatgttagggatagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtccctaa |
101 |
Q |
| |
|
|||||||||||||||| |||||| || ||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||| ||||||| | | | | |
|
|
| T |
10353644 |
agaatgttagggataggaagagggagaaaagggataatccgatgcttacgggtgttggggttccatattgtgatttcgttgggggcgttaggatgcgtga |
10353743 |
T |
 |
| Q |
102 |
aagcgatttggccataggagatagcaatgaggccgttgcatgaaccgataagagccatgttgctgttacgcgtgacaggagcaatgttggtgctg |
196 |
Q |
| |
|
|||| ||| ||| | ||| || || | ||||||||| |||||||||||||||| ||| || |||||| | ||| |||| | |||||||||||| |
|
|
| T |
10353744 |
aagctattacgccgtgggacatggcgaggaggccgttacatgaaccgataagagtaatggtgttgttacccttgaaaggatcgatgttggtgctg |
10353838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 9292451 - 9292630
Alignment:
| Q |
2 |
agaatgttagggatagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtccctaa |
101 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||| |||| |||| | |||||||||||| ||| |||||||||||| ||| ||| ||| | | | | |
|
|
| T |
9292451 |
agaatgttagggatagcaagagggagaaaagggataatccgatgtttatgagtgttagggttcaagactgtgatttcgttaggggcgtaaggatgcgtga |
9292550 |
T |
 |
| Q |
102 |
aagcgatttggccataggagatagcaatgaggccgttgcatgaaccgataagagccatgttgctgttacgcgtgacagga |
181 |
Q |
| |
|
| |||||||| || ||| || || | ||||||||| |||||||| ||||||| |||| |||| ||||||||| |||| |
|
|
| T |
9292551 |
agcagatttggctattggaaatggcgaggaggccgttacatgaaccaataagaggcatgaagctggtacgcgtgatagga |
9292630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 10348312 - 10348474
Alignment:
| Q |
9 |
tagggatagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtccctaaaagcgat |
108 |
Q |
| |
|
|||| |||| |||||| || ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || |||||| | | | ||| |||| |
|
|
| T |
10348312 |
taggaataggaagagggagaaaagggataatgtgatgtttacgggtgttagggttccagattgtgatttcgttgaggttgttaggatgcgtgaaaacgat |
10348411 |
T |
 |
| Q |
109 |
ttggccataggagatagcaatgaggccgttgcatgaaccgataagagccatgttgctgttacg |
171 |
Q |
| |
|
| || |||||| || | ||||||||| |||||||||||||||| ||| || |||||||| |
|
|
| T |
10348412 |
tacccctgtggagatggcgaggaggccgttacatgaaccgataagagacattttactgttacg |
10348474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 7115220 - 7115101
Alignment:
| Q |
41 |
cgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtccctaaaagcgatttggccataggagatagcaatgaggccgttgc |
140 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||| | | | ||||| | | |||||||||||||||||| |||||| || | ||||||||| | |
|
|
| T |
7115220 |
cgatgtttacgggtgttagtgttccagattgtgatttcagttgcgtgattaggatacgtaaaagcgatttggccattggagatggcgaggaggccgttac |
7115121 |
T |
 |
| Q |
141 |
atgaaccgataagagccatg |
160 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
7115120 |
atgaaccgataagatccatg |
7115101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 8573100 - 8573031
Alignment:
| Q |
14 |
atagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttgg |
83 |
Q |
| |
|
|||| |||||| || ||||||||||| ||| |||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
8573100 |
ataggaagagggagaaaagggataatgtgatgtttacgggtgttagggttccagattgcgatttggttgg |
8573031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 10372391 - 10372467
Alignment:
| Q |
9 |
tagggatagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttgggg |
85 |
Q |
| |
|
|||| |||| |||||| || |||||||||| | || ||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
10372391 |
taggaataggaagagggagaaaagggataaccctatgtttacgggtgttagggttccagaatgtgatttcattgggg |
10372467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 9060740 - 9060665
Alignment:
| Q |
4 |
aatgttagggatagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcg |
79 |
Q |
| |
|
|||||||||||||| |||||| | |||||||| | |||| ||| |||||||||||||||||||||||| ||||| |
|
|
| T |
9060740 |
aatgttagggataggaagagggataaaagggatggtccgatctttgcgggtgttagggttccagattgtggtttcg |
9060665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 10348509 - 10348585
Alignment:
| Q |
185 |
atgttggtgctgaaaggatggttgagtggaatcatggatttggttagattaggaagatcgagttggtagagatcggt |
261 |
Q |
| |
|
|||||||| |||| |||| |||||||||||| || ||||||||||| ||||| | || ||||||||||| |||||| |
|
|
| T |
10348509 |
atgttggtagtgaagggatagttgagtggaatgatagatttggttaggttagggaaatggagttggtagaaatcggt |
10348585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 11987068 - 11987017
Alignment:
| Q |
31 |
agggataatacgatatttacgggtgttagggttccagattgtgatttcgttg |
82 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||||||| | |||||||||| |
|
|
| T |
11987068 |
agggataatccgatgtttacgggtgttagggttccagaaagcgatttcgttg |
11987017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 10336386 - 10336519
Alignment:
| Q |
30 |
aagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtccctaaaagcgatttggccataggagatagcaat |
129 |
Q |
| |
|
|||||||||| |||| ||||||| || |||| || |||| || |||||| |||| | || ||||| | |||||||||| ||||| |||||| || | |
|
|
| T |
10336386 |
aagggataatccgatgtttacggatggtaggattacagaatgcgatttcattggcggagtaagggttagtgaaagcgatttcgccattggagatggcgag |
10336485 |
T |
 |
| Q |
130 |
gaggccgttgcatgaaccgataagagccatgttg |
163 |
Q |
| |
|
|||||| ||||||||||| | |||||| |||||| |
|
|
| T |
10336486 |
gaggccattgcatgaaccaagaagagcgatgttg |
10336519 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 12005705 - 12005657
Alignment:
| Q |
31 |
agggataatacgatatttacgggtgttagggttccagattgtgatttcg |
79 |
Q |
| |
|
||||||||| |||| ||||||| ||||||||||||||| ||||||||| |
|
|
| T |
12005705 |
agggataatccgatgtttacggatgttagggttccagaaagtgatttcg |
12005657 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 37463048 - 37463191
Alignment:
| Q |
29 |
aaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtccctaaaagcgatttggccataggagatagcaa |
128 |
Q |
| |
|
||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| | ||||||| | | | |||||||||||||||| ||||||||| | |
|
|
| T |
37463048 |
aaagggataatcagatgtttacgtgtgttagggttccagattgtgatttcgttggcggcgttaggatgcgtgaaagcgatttggccattggagatagcga |
37463147 |
T |
 |
| Q |
129 |
tgaggccgttgcatgaaccgataagagccatgttgctgttacgc |
172 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||| |||| |
|
|
| T |
37463148 |
ggaggccgttacatgaaccgataagagccatggtgctgtcacgc |
37463191 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 26575396 - 26575549
Alignment:
| Q |
2 |
agaatgttagggatagcaagaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtccctaa |
101 |
Q |
| |
|
|||||||||||||| | |||||| || ||||||||||| |||||||||| ||||| |||||||||||||| ||||||||||||| |||| || | | | | |
|
|
| T |
26575396 |
agaatgttagggatgggaagagggagaaaagggataatccgatatttaccggtgtaagggttccagattgcgatttcgttgggggcgttgggatgcgtga |
26575495 |
T |
 |
| Q |
102 |
aagcgatttggccataggagatagcaatgaggccgttgcatgaaccgataagag |
155 |
Q |
| |
|
|||| ||| ||| | ||| || || | ||||||||| |||||||||||||||| |
|
|
| T |
26575496 |
aagccattacgccgtgggacatggcgaggaggccgttacatgaaccgataagag |
26575549 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0667 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0667
Description:
Target: scaffold0667; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 5018 - 5177
Alignment:
| Q |
20 |
agaggtaggaaagggataatacgatatttacgggtgttagggttccagattgtgatttcgttggggccgttagggtccctaaaagcgatttggccatagg |
119 |
Q |
| |
|
||||| || ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| | ||||||| | || | |||||||| ||| | || |
|
|
| T |
5018 |
agagggagaaaagggataatgtgatgtttacggatgttagggttccagattgtgatttcgttggcggcgttaggatgtctgagagcgatttcgccgttgg |
5117 |
T |
 |
| Q |
120 |
agatagcaatgaggccgttgcatgaaccgataagagccatgt---tgctgttacgcgtga |
176 |
Q |
| |
|
| | || | ||||||||| ||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
5118 |
aaacggcgaggaggccgttacatgaaccgataagagcaatgttggtgctgttacgcgtga |
5177 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 41966303 - 41966254
Alignment:
| Q |
29 |
aaagggataatacgatatttacgggtgttagggttccagattgtgatttc |
78 |
Q |
| |
|
||||||||||| |||| ||||| | ||||||||||||||| ||||||||| |
|
|
| T |
41966303 |
aaagggataatccgatgtttacagatgttagggttccagaatgtgatttc |
41966254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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