View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17764_low_10 (Length: 287)

Name: NF17764_low_10
Description: NF17764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17764_low_10
NF17764_low_10
[»] chr5 (74 HSPs)
chr5 (139-271)||(10645-10777)
chr5 (139-255)||(25424932-25425048)
chr5 (139-258)||(29192469-29192589)
chr5 (142-257)||(16534657-16534773)
chr5 (140-265)||(18779879-18780005)
chr5 (139-265)||(35792938-35793065)
chr5 (155-258)||(11340914-11341020)
chr5 (193-271)||(10619-10697)
chr5 (193-258)||(10606-10671)
chr5 (155-232)||(19498107-19498184)
chr5 (193-264)||(35793019-35793090)
chr5 (155-232)||(10478-10556)
chr5 (155-232)||(1221582-1221660)
chr5 (193-264)||(18779959-18780030)
chr5 (217-271)||(18779931-18779985)
chr5 (155-232)||(43445652-43445730)
chr5 (155-219)||(17473644-17473708)
chr5 (202-258)||(22885007-22885063)
chr5 (224-271)||(35792998-35793045)
chr5 (20-62)||(10854-10896)
chr5 (217-271)||(16534669-16534723)
chr5 (155-232)||(22368281-22368359)
chr5 (20-62)||(25425125-25425167)
chr5 (20-62)||(29192350-29192392)
chr5 (217-271)||(29192522-29192576)
chr5 (20-60)||(4201699-4201739)
chr5 (20-60)||(20615118-20615158)
chr5 (20-60)||(21075221-21075261)
chr5 (20-60)||(24595006-24595046)
chr5 (20-60)||(25902058-25902098)
chr5 (20-60)||(37051490-37051530)
chr5 (176-265)||(11340935-11341022)
chr5 (176-264)||(34937810-34937894)
chr5 (180-232)||(110858-110910)
chr5 (20-60)||(11341141-11341181)
chr5 (20-60)||(16534812-16534852)
chr5 (20-60)||(21933892-21933932)
chr5 (20-60)||(21940062-21940102)
chr5 (20-60)||(23327458-23327498)
chr5 (219-271)||(25424942-25424994)
chr5 (20-60)||(27008517-27008557)
chr5 (20-60)||(35580760-35580800)
chr5 (20-60)||(37010896-37010936)
chr5 (176-258)||(10478-10558)
chr5 (176-258)||(1221580-1221660)
chr5 (228-271)||(22885007-22885050)
chr5 (20-62)||(10779912-10779954)
chr5 (193-258)||(10780071-10780134)
chr5 (20-62)||(19498303-19498345)
chr5 (20-62)||(22368217-22368259)
chr5 (20-62)||(23510418-23510460)
chr5 (217-258)||(110869-110910)
chr5 (23-60)||(21235142-21235179)
chr5 (193-264)||(21653135-21653202)
chr5 (176-238)||(21653142-21653202)
chr5 (20-62)||(110717-110759)
chr5 (26-60)||(7424108-7424142)
chr5 (193-258)||(9732551-9732614)
chr5 (20-62)||(18779803-18779845)
chr5 (20-62)||(21661347-21661389)
chr5 (20-62)||(22884916-22884958)
chr5 (20-62)||(27185457-27185499)
chr5 (20-62)||(35792863-35792905)
chr5 (20-62)||(43445490-43445532)
chr5 (177-258)||(43445651-43445730)
chr5 (20-61)||(11213336-11213377)
chr5 (243-271)||(10491-10519)
chr5 (243-271)||(110869-110897)
chr5 (20-60)||(1221465-1221505)
chr5 (243-271)||(1221619-1221647)
chr5 (176-232)||(10780078-10780134)
chr5 (243-271)||(11340955-11340983)
chr5 (20-60)||(25211625-25211665)
chr5 (20-60)||(25275777-25275817)
[»] chr4 (46 HSPs)
chr4 (139-271)||(18246482-18246614)
chr4 (139-258)||(16521067-16521194)
chr4 (193-271)||(18246456-18246534)
chr4 (148-232)||(26678348-26678433)
chr4 (155-232)||(7134254-7134332)
chr4 (193-255)||(18246446-18246508)
chr4 (155-232)||(19998832-19998909)
chr4 (155-271)||(7134206-7134319)
chr4 (155-229)||(22356368-22356443)
chr4 (155-232)||(8372778-8372856)
chr4 (193-258)||(18167045-18167108)
chr4 (20-62)||(18246691-18246733)
chr4 (20-60)||(10487174-10487214)
chr4 (20-60)||(16329537-16329577)
chr4 (155-255)||(22356344-22356443)
chr4 (20-60)||(13049778-13049818)
chr4 (176-232)||(18167045-18167101)
chr4 (23-59)||(26337989-26338025)
chr4 (176-258)||(7134252-7134332)
chr4 (20-62)||(109983-110025)
chr4 (20-62)||(8372974-8373016)
chr4 (20-62)||(14994701-14994743)
chr4 (20-62)||(15138173-15138215)
chr4 (20-62)||(15274374-15274416)
chr4 (20-62)||(19999028-19999070)
chr4 (229-271)||(47355690-47355732)
chr4 (219-271)||(18167058-18167108)
chr4 (217-258)||(26678348-26678389)
chr4 (176-212)||(19699331-19699367)
chr4 (176-212)||(19709916-19709952)
chr4 (176-258)||(8372778-8372858)
chr4 (20-62)||(5684518-5684560)
chr4 (20-62)||(9293950-9293992)
chr4 (20-62)||(10642612-10642654)
chr4 (20-62)||(15211840-15211882)
chr4 (26-60)||(15288647-15288681)
chr4 (26-60)||(15295814-15295848)
chr4 (20-62)||(21961192-21961234)
chr4 (20-62)||(26678545-26678587)
chr4 (193-258)||(34393558-34393621)
chr4 (20-62)||(44054356-44054398)
chr4 (20-62)||(47355826-47355868)
chr4 (20-60)||(7134090-7134130)
chr4 (20-60)||(14950523-14950563)
chr4 (243-271)||(22356405-22356433)
chr4 (243-271)||(26678361-26678389)
[»] chr3 (71 HSPs)
chr3 (139-271)||(18908983-18909115)
chr3 (139-271)||(22273338-22273470)
chr3 (139-255)||(2451058-2451174)
chr3 (139-258)||(49230561-49230681)
chr3 (176-258)||(19944976-19945058)
chr3 (193-271)||(18908957-18909035)
chr3 (193-263)||(19945047-19945117)
chr3 (139-239)||(16259412-16259513)
chr3 (193-258)||(18908944-18909009)
chr3 (193-271)||(22273312-22273390)
chr3 (148-232)||(16819212-16819297)
chr3 (155-232)||(7852013-7852091)
chr3 (193-255)||(22273302-22273364)
chr3 (193-271)||(19944989-19945065)
chr3 (155-232)||(11812972-11813050)
chr3 (20-62)||(2450939-2450981)
chr3 (20-62)||(18909192-18909234)
chr3 (20-62)||(22273547-22273589)
chr3 (217-271)||(49230574-49230628)
chr3 (20-60)||(8270015-8270055)
chr3 (20-60)||(8277126-8277166)
chr3 (20-60)||(8305935-8305975)
chr3 (20-60)||(13956417-13956457)
chr3 (20-60)||(13977250-13977290)
chr3 (217-269)||(16259408-16259460)
chr3 (20-60)||(16745783-16745823)
chr3 (20-60)||(30151838-30151878)
chr3 (20-60)||(41268743-41268783)
chr3 (20-60)||(45859521-45859561)
chr3 (20-60)||(53769162-53769202)
chr3 (20-60)||(55314883-55314923)
chr3 (20-60)||(1469265-1469305)
chr3 (219-271)||(2451112-2451164)
chr3 (219-271)||(19945065-19945117)
chr3 (20-60)||(44227929-44227969)
chr3 (176-258)||(7852013-7852093)
chr3 (139-258)||(11812972-11813092)
chr3 (20-62)||(12266102-12266144)
chr3 (20-62)||(14846274-14846316)
chr3 (20-62)||(15574547-15574589)
chr3 (20-62)||(15613566-15613608)
chr3 (20-62)||(16819409-16819451)
chr3 (20-62)||(18905369-18905411)
chr3 (20-62)||(19262630-19262672)
chr3 (20-62)||(23081777-23081819)
chr3 (217-258)||(16819212-16819253)
chr3 (20-60)||(27839209-27839249)
chr3 (173-212)||(9304571-9304610)
chr3 (219-258)||(38166385-38166424)
chr3 (193-232)||(38166385-38166424)
chr3 (20-62)||(319237-319279)
chr3 (20-62)||(2048561-2048603)
chr3 (20-62)||(5227218-5227260)
chr3 (20-62)||(8630340-8630382)
chr3 (20-62)||(15470076-15470118)
chr3 (20-62)||(17913865-17913907)
chr3 (193-258)||(17936627-17936690)
chr3 (20-62)||(19945129-19945171)
chr3 (20-62)||(23491006-23491048)
chr3 (20-62)||(25057273-25057315)
chr3 (20-62)||(49230714-49230756)
chr3 (24-61)||(10737060-10737097)
chr3 (243-271)||(7852026-7852054)
chr3 (224-264)||(9304522-9304562)
chr3 (243-271)||(11812985-11813013)
chr3 (193-257)||(15516051-15516115)
chr3 (243-271)||(16259432-16259460)
chr3 (243-271)||(16819225-16819253)
chr3 (226-258)||(30141155-30141187)
chr3 (148-238)||(30141227-30141316)
chr3 (20-60)||(30141387-30141427)
[»] chr6 (54 HSPs)
chr6 (139-267)||(25173858-25173986)
chr6 (214-271)||(25173796-25173853)
chr6 (155-232)||(18579005-18579083)
chr6 (193-255)||(25173786-25173848)
chr6 (193-264)||(18825606-18825675)
chr6 (155-264)||(18128578-18128686)
chr6 (176-238)||(18825613-18825675)
chr6 (155-232)||(23975880-23975958)
chr6 (20-62)||(25174063-25174105)
chr6 (20-62)||(27655699-27655741)
chr6 (20-60)||(16230090-16230130)
chr6 (20-60)||(16650859-16650899)
chr6 (20-60)||(23993670-23993710)
chr6 (20-60)||(29871088-29871128)
chr6 (148-232)||(33316348-33316435)
chr6 (23-60)||(16557632-16557669)
chr6 (23-60)||(16642627-16642664)
chr6 (180-232)||(4989253-4989305)
chr6 (20-60)||(10487389-10487429)
chr6 (20-60)||(16377898-16377938)
chr6 (20-60)||(16385222-16385262)
chr6 (148-258)||(18843621-18843730)
chr6 (20-60)||(22227291-22227331)
chr6 (219-271)||(25173880-25173932)
chr6 (176-258)||(18128510-18128590)
chr6 (20-62)||(1651561-1651603)
chr6 (20-62)||(11214646-11214688)
chr6 (193-258)||(18004816-18004879)
chr6 (176-264)||(18128676-18128760)
chr6 (20-62)||(23976076-23976118)
chr6 (20-62)||(33316195-33316237)
chr6 (217-258)||(4989253-4989294)
chr6 (216-271)||(18825603-18825656)
chr6 (176-212)||(19627737-19627773)
chr6 (20-60)||(26088344-26088384)
chr6 (176-212)||(35011041-35011077)
chr6 (20-59)||(15861243-15861282)
chr6 (217-256)||(16827644-16827683)
chr6 (176-258)||(18579005-18579085)
chr6 (20-62)||(1554348-1554390)
chr6 (20-62)||(1659322-1659364)
chr6 (20-62)||(4989404-4989446)
chr6 (20-62)||(14628224-14628266)
chr6 (180-230)||(16827633-16827683)
chr6 (20-62)||(18004664-18004706)
chr6 (26-60)||(18088407-18088441)
chr6 (20-62)||(19984819-19984861)
chr6 (20-62)||(22428673-22428715)
chr6 (20-62)||(32896495-32896537)
chr6 (217-258)||(33316394-33316435)
chr6 (243-271)||(4989266-4989294)
chr6 (176-232)||(18004823-18004879)
chr6 (20-60)||(18825449-18825489)
chr6 (224-271)||(18843672-18843717)
[»] chr2 (45 HSPs)
chr2 (139-271)||(19888510-19888642)
chr2 (139-271)||(25211197-25211330)
chr2 (139-229)||(8941980-8942070)
chr2 (155-258)||(3800887-3800991)
chr2 (193-271)||(25211171-25211249)
chr2 (193-258)||(25211158-25211223)
chr2 (155-232)||(12643756-12643834)
chr2 (193-255)||(19888590-19888652)
chr2 (20-62)||(19888391-19888433)
chr2 (21-62)||(8942147-8942188)
chr2 (155-232)||(21276287-21276364)
chr2 (176-271)||(3800885-3800978)
chr2 (20-60)||(12726556-12726596)
chr2 (20-60)||(17398209-17398249)
chr2 (20-60)||(20013626-20013666)
chr2 (20-60)||(23773040-23773080)
chr2 (20-60)||(23818683-23818723)
chr2 (20-60)||(24687282-24687322)
chr2 (155-232)||(12637938-12638016)
chr2 (20-60)||(3800726-3800766)
chr2 (20-60)||(5889909-5889949)
chr2 (20-60)||(11232864-11232904)
chr2 (20-60)||(14908051-14908091)
chr2 (20-60)||(22514711-22514751)
chr2 (20-60)||(28777312-28777352)
chr2 (20-60)||(34822701-34822741)
chr2 (176-258)||(12643754-12643834)
chr2 (20-62)||(12637778-12637820)
chr2 (20-62)||(21140378-21140420)
chr2 (20-62)||(21276140-21276182)
chr2 (20-62)||(24828174-24828216)
chr2 (20-62)||(24832626-24832668)
chr2 (20-62)||(25211381-25211423)
chr2 (176-212)||(7513780-7513816)
chr2 (176-212)||(42180127-42180163)
chr2 (19-62)||(6877936-6877979)
chr2 (20-62)||(8886634-8886676)
chr2 (216-250)||(15631798-15631832)
chr2 (224-258)||(21276330-21276364)
chr2 (20-62)||(22273386-22273428)
chr2 (20-62)||(22282619-22282661)
chr2 (193-264)||(461083-461152)
chr2 (219-255)||(8941980-8942016)
chr2 (20-60)||(12643639-12643679)
chr2 (243-271)||(12643793-12643821)
[»] chr1 (29 HSPs)
chr1 (139-255)||(17147088-17147204)
chr1 (139-258)||(15863123-15863243)
chr1 (202-258)||(22250742-22250798)
chr1 (20-62)||(7642205-7642247)
chr1 (217-271)||(15863176-15863230)
chr1 (20-62)||(17147281-17147323)
chr1 (20-60)||(5073923-5073963)
chr1 (20-60)||(18602666-18602706)
chr1 (20-60)||(20826844-20826884)
chr1 (20-60)||(22034350-22034390)
chr1 (20-60)||(51451115-51451155)
chr1 (20-60)||(17003327-17003367)
chr1 (219-271)||(17147098-17147150)
chr1 (20-60)||(21651632-21651672)
chr1 (20-60)||(41392954-41392994)
chr1 (176-238)||(20252581-20252641)
chr1 (228-271)||(22250742-22250785)
chr1 (20-62)||(22226482-22226524)
chr1 (20-62)||(35935195-35935237)
chr1 (176-262)||(20589862-20589946)
chr1 (176-258)||(41217717-41217797)
chr1 (20-62)||(15863048-15863090)
chr1 (20-62)||(20929972-20930014)
chr1 (193-258)||(22352446-22352509)
chr1 (20-62)||(22352627-22352669)
chr1 (26-60)||(29137322-29137356)
chr1 (20-62)||(35053334-35053376)
chr1 (20-62)||(45050187-45050229)
chr1 (193-264)||(20252581-20252648)
[»] scaffold0383 (3 HSPs)
scaffold0383 (139-271)||(706-839)
scaffold0383 (193-258)||(693-758)
scaffold0383 (20-62)||(872-914)
[»] scaffold0032 (3 HSPs)
scaffold0032 (139-271)||(109773-109906)
scaffold0032 (193-258)||(109854-109919)
scaffold0032 (20-62)||(54142-54184)
[»] scaffold0315 (3 HSPs)
scaffold0315 (141-258)||(16939-17057)
scaffold0315 (217-271)||(16952-17006)
scaffold0315 (20-60)||(17075-17115)
[»] chr8 (45 HSPs)
chr8 (171-271)||(28836258-28836358)
chr8 (155-232)||(13664494-13664572)
chr8 (155-232)||(13723769-13723847)
chr8 (155-232)||(23509239-23509317)
chr8 (20-60)||(224776-224816)
chr8 (20-60)||(738399-738439)
chr8 (20-60)||(862294-862334)
chr8 (20-60)||(15320673-15320713)
chr8 (20-60)||(15501042-15501082)
chr8 (20-60)||(16675939-16675979)
chr8 (20-60)||(16874552-16874592)
chr8 (20-60)||(22090057-22090097)
chr8 (20-60)||(24662859-24662899)
chr8 (20-60)||(43684158-43684198)
chr8 (193-258)||(24108424-24108487)
chr8 (20-60)||(272815-272855)
chr8 (20-60)||(642994-643034)
chr8 (20-60)||(828800-828840)
chr8 (20-60)||(3433189-3433229)
chr8 (20-60)||(5236699-5236739)
chr8 (176-232)||(24108431-24108487)
chr8 (176-238)||(16041271-16041331)
chr8 (176-238)||(16042947-16043007)
chr8 (20-62)||(23509420-23509462)
chr8 (175-271)||(24108382-24108474)
chr8 (20-62)||(24547726-24547768)
chr8 (193-255)||(28836248-28836310)
chr8 (20-60)||(701189-701229)
chr8 (176-212)||(18610667-18610703)
chr8 (20-60)||(21846104-21846144)
chr8 (20-60)||(21853509-21853549)
chr8 (20-62)||(13664325-13664367)
chr8 (224-258)||(13664538-13664572)
chr8 (20-62)||(13723600-13723642)
chr8 (224-258)||(13723813-13723847)
chr8 (20-62)||(22008168-22008210)
chr8 (155-232)||(22909286-22909364)
chr8 (20-62)||(24387323-24387365)
chr8 (20-62)||(24930731-24930773)
chr8 (20-62)||(37605486-37605528)
chr8 (20-60)||(22909175-22909215)
chr8 (226-258)||(22909332-22909364)
chr8 (20-60)||(24108274-24108314)
chr8 (157-212)||(24719171-24719227)
chr8 (226-258)||(41508917-41508949)
[»] scaffold0125 (2 HSPs)
scaffold0125 (159-258)||(29808-29908)
scaffold0125 (217-271)||(29821-29875)
[»] chr7 (55 HSPs)
chr7 (139-232)||(15952787-15952881)
chr7 (139-232)||(2024836-2024930)
chr7 (139-255)||(16416777-16416895)
chr7 (178-271)||(16416787-16416879)
chr7 (155-232)||(2192550-2192628)
chr7 (159-232)||(7286276-7286350)
chr7 (155-232)||(16480780-16480858)
chr7 (20-62)||(16416972-16417014)
chr7 (20-60)||(11514629-11514669)
chr7 (20-60)||(13757085-13757125)
chr7 (20-60)||(15443175-15443215)
chr7 (20-60)||(25293895-25293935)
chr7 (20-60)||(26010809-26010849)
chr7 (20-60)||(30263740-30263780)
chr7 (20-59)||(42057780-42057819)
chr7 (20-60)||(7821431-7821471)
chr7 (20-60)||(7828742-7828782)
chr7 (20-60)||(10988118-10988158)
chr7 (20-60)||(13912730-13912770)
chr7 (20-60)||(15518474-15518514)
chr7 (20-60)||(27103163-27103203)
chr7 (20-60)||(27110511-27110551)
chr7 (20-60)||(27175123-27175163)
chr7 (20-60)||(38785255-38785295)
chr7 (176-258)||(2192548-2192628)
chr7 (20-62)||(369390-369432)
chr7 (217-258)||(7286309-7286350)
chr7 (176-264)||(13867778-13867864)
chr7 (217-258)||(15952840-15952881)
chr7 (217-258)||(16480817-16480858)
chr7 (20-60)||(2436135-2436175)
chr7 (20-60)||(18981599-18981639)
chr7 (193-232)||(14253054-14253093)
chr7 (219-258)||(14253054-14253093)
chr7 (20-62)||(123005-123047)
chr7 (20-62)||(1938395-1938437)
chr7 (20-62)||(2192388-2192430)
chr7 (20-62)||(3893591-3893633)
chr7 (155-264)||(7286172-7286282)
chr7 (20-62)||(11582564-11582606)
chr7 (20-62)||(12753377-12753419)
chr7 (20-62)||(15761985-15762027)
chr7 (26-60)||(15925799-15925833)
chr7 (20-62)||(15952712-15952754)
chr7 (20-62)||(18255440-18255482)
chr7 (20-62)||(32496174-32496216)
chr7 (20-62)||(45453881-45453923)
chr7 (217-258)||(2024836-2024877)
chr7 (176-264)||(11285513-11285599)
chr7 (243-271)||(2024849-2024877)
chr7 (243-271)||(2192587-2192615)
chr7 (243-271)||(7286309-7286337)
chr7 (20-60)||(7291282-7291322)
chr7 (243-271)||(15952840-15952868)
chr7 (243-271)||(16480817-16480845)
[»] scaffold0269 (3 HSPs)
scaffold0269 (159-258)||(455-555)
scaffold0269 (217-271)||(468-522)
scaffold0269 (20-62)||(580-622)
[»] scaffold0034 (4 HSPs)
scaffold0034 (159-265)||(77790-77897)
scaffold0034 (193-264)||(77765-77836)
scaffold0034 (217-271)||(77810-77864)
scaffold0034 (176-264)||(36062-36148)
[»] scaffold0003 (4 HSPs)
scaffold0003 (139-255)||(5489-5607)
scaffold0003 (178-271)||(5499-5591)
scaffold0003 (20-62)||(5684-5726)
scaffold0003 (20-62)||(217366-217408)
[»] scaffold0384 (4 HSPs)
scaffold0384 (148-265)||(149-267)
scaffold0384 (193-258)||(221-286)
scaffold0384 (217-271)||(193-247)
scaffold0384 (20-62)||(29-71)
[»] scaffold0483 (3 HSPs)
scaffold0483 (155-232)||(4582-4660)
scaffold0483 (155-271)||(4533-4647)
scaffold0483 (176-258)||(4580-4660)
[»] scaffold0335 (3 HSPs)
scaffold0335 (155-232)||(9874-9952)
scaffold0335 (173-258)||(9869-9952)
scaffold0335 (243-271)||(9911-9939)
[»] scaffold0109 (3 HSPs)
scaffold0109 (155-232)||(49422-49500)
scaffold0109 (155-271)||(49373-49487)
scaffold0109 (176-258)||(49420-49500)
[»] scaffold0023 (5 HSPs)
scaffold0023 (155-232)||(156127-156205)
scaffold0023 (20-60)||(34837-34877)
scaffold0023 (176-258)||(156125-156205)
scaffold0023 (20-62)||(155966-156008)
scaffold0023 (243-271)||(156164-156192)
[»] scaffold0130 (2 HSPs)
scaffold0130 (193-258)||(31385-31450)
scaffold0130 (217-271)||(31398-31452)
[»] scaffold0195 (6 HSPs)
scaffold0195 (155-232)||(17694-17772)
scaffold0195 (160-232)||(19724-19797)
scaffold0195 (176-258)||(17694-17774)
scaffold0195 (217-258)||(19724-19765)
scaffold0195 (193-271)||(17707-17781)
scaffold0195 (243-271)||(19737-19765)
[»] scaffold0028 (5 HSPs)
scaffold0028 (155-232)||(90746-90824)
scaffold0028 (214-258)||(128782-128826)
scaffold0028 (20-62)||(128890-128932)
scaffold0028 (217-258)||(90783-90824)
scaffold0028 (243-271)||(90783-90811)
[»] scaffold0155 (1 HSPs)
scaffold0155 (20-60)||(24879-24919)
[»] scaffold0141 (2 HSPs)
scaffold0141 (20-60)||(21152-21192)
scaffold0141 (20-60)||(25407-25447)
[»] scaffold0124 (1 HSPs)
scaffold0124 (20-60)||(3189-3229)
[»] scaffold0107 (1 HSPs)
scaffold0107 (20-60)||(29855-29895)
[»] scaffold0077 (1 HSPs)
scaffold0077 (155-232)||(21577-21655)
[»] scaffold0215 (1 HSPs)
scaffold0215 (20-60)||(17706-17746)
[»] scaffold0076 (1 HSPs)
scaffold0076 (20-60)||(37793-37833)
[»] scaffold0138 (2 HSPs)
scaffold0138 (176-238)||(26689-26749)
scaffold0138 (193-264)||(26689-26756)
[»] scaffold1560 (1 HSPs)
scaffold1560 (20-62)||(1402-1444)
[»] scaffold0396 (1 HSPs)
scaffold0396 (20-62)||(15945-15987)
[»] scaffold0302 (1 HSPs)
scaffold0302 (20-62)||(4343-4385)
[»] scaffold0225 (1 HSPs)
scaffold0225 (20-62)||(14802-14844)
[»] scaffold0134 (1 HSPs)
scaffold0134 (229-271)||(25720-25762)
[»] scaffold0022 (2 HSPs)
scaffold0022 (20-62)||(6765-6807)
scaffold0022 (20-62)||(59052-59094)
[»] scaffold0342 (1 HSPs)
scaffold0342 (156-232)||(2410-2487)
[»] scaffold0292 (1 HSPs)
scaffold0292 (176-264)||(17951-18037)
[»] scaffold0104 (1 HSPs)
scaffold0104 (21-62)||(51534-51575)
[»] scaffold0044 (3 HSPs)
scaffold0044 (176-264)||(94519-94605)
scaffold0044 (155-238)||(94593-94675)
scaffold0044 (155-264)||(94593-94699)
[»] scaffold0158 (1 HSPs)
scaffold0158 (176-212)||(23275-23311)
[»] scaffold0447 (2 HSPs)
scaffold0447 (176-258)||(2789-2869)
scaffold0447 (176-258)||(2917-2997)
[»] scaffold0434 (1 HSPs)
scaffold0434 (196-258)||(3079-3139)
[»] scaffold0346 (1 HSPs)
scaffold0346 (196-258)||(15897-15957)
[»] scaffold0039 (2 HSPs)
scaffold0039 (176-258)||(21100-21180)
scaffold0039 (193-258)||(20989-21052)
[»] scaffold1404 (1 HSPs)
scaffold1404 (20-62)||(58-100)
[»] scaffold0413 (1 HSPs)
scaffold0413 (20-62)||(9542-9584)
[»] scaffold0395 (1 HSPs)
scaffold0395 (20-62)||(14173-14215)
[»] scaffold0266 (1 HSPs)
scaffold0266 (20-62)||(12817-12859)
[»] scaffold0251 (1 HSPs)
scaffold0251 (26-60)||(15566-15600)
[»] scaffold0184 (5 HSPs)
scaffold0184 (20-62)||(32809-32851)
scaffold0184 (155-232)||(33558-33636)
scaffold0184 (226-258)||(33558-33590)
scaffold0184 (148-238)||(33626-33715)
scaffold0184 (20-60)||(33779-33819)
[»] scaffold0120 (1 HSPs)
scaffold0120 (20-62)||(27069-27111)
[»] scaffold0106 (1 HSPs)
scaffold0106 (20-62)||(40027-40069)
[»] scaffold0078 (5 HSPs)
scaffold0078 (155-232)||(39208-39286)
scaffold0078 (20-62)||(39993-40035)
scaffold0078 (20-60)||(39025-39065)
scaffold0078 (148-238)||(39129-39218)
scaffold0078 (226-258)||(39254-39286)
[»] scaffold0068 (1 HSPs)
scaffold0068 (20-62)||(60069-60111)
[»] scaffold0051 (1 HSPs)
scaffold0051 (20-62)||(56434-56476)
[»] scaffold0037 (1 HSPs)
scaffold0037 (20-62)||(66345-66387)
[»] scaffold0026 (1 HSPs)
scaffold0026 (20-62)||(106502-106544)
[»] scaffold0025 (2 HSPs)
scaffold0025 (20-62)||(145033-145075)
scaffold0025 (20-62)||(147292-147334)
[»] scaffold0012 (1 HSPs)
scaffold0012 (20-62)||(249167-249209)
[»] scaffold0009 (2 HSPs)
scaffold0009 (20-62)||(236676-236718)
scaffold0009 (20-62)||(270622-270664)
[»] scaffold0008 (1 HSPs)
scaffold0008 (20-62)||(129817-129859)
[»] scaffold0001 (1 HSPs)
scaffold0001 (197-238)||(166101-166142)
[»] scaffold0338 (1 HSPs)
scaffold0338 (199-258)||(7153-7210)
[»] scaffold0083 (1 HSPs)
scaffold0083 (20-60)||(12695-12735)
[»] scaffold0049 (1 HSPs)
scaffold0049 (157-212)||(30940-30996)


Alignment Details
Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 10777 - 10645
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10777 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgatgtatatgatcggtgattgttcatga 10678  T
Q  239 tatatatgattggtgattgttcatgatgtatat 271  Q
    | |||||||||||||||||||||||||||||||    
T  10677 tgtatatgattggtgattgttcatgatgtatat 10645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 25425048 - 25424932
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  25425048 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgatgtatatgatcagtgattgttcatga 25424949  T
Q  239 tatatatgattggtgat 255  Q
    | |||||||||||||||    
T  25424948 tgtatatgattggtgat 25424932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 29192469 - 29192589
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatg 237  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  29192469 tatttgtgaattgataattgttcatgaaatatgattaatgattgtgcatgacttatgattggtgattgttcatgatgtatatgatcggtgattgttcatg 29192568  T
Q  238 atatatatgattggtgattgt 258  Q
    || |||||||| |||||||||    
T  29192569 atgtatatgatcggtgattgt 29192589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 142 - 257
Target Start/End: Complemental strand, 16534773 - 16534657
Alignment:
Q  142 ttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgata 240  Q
    ||||||||||||||||||||||||| |||||| ||||||||| |||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||     
T  16534773 ttgtgaattgataattgttcatgaaatatgattaatgattgtgcatggcttatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatg 16534674  T
Q  241 tatatgattggtgattg 257  Q
    |||||||||||||||||    
T  16534673 tatatgattggtgattg 16534657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 18779879 - 18780005
Alignment:
Q  140 atttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||| ||| |||||||||||||||||||| ||||||||| |||||||||||||||    
T  18779879 atttgtgaattgataattgttcatgaaatatgattaatgattgtgcatggcttatgattggtgattgttcatgatgtatatgattggtgattgttcatga 18779978  T
Q  239 tatatatgattggtgattgttcatgat 265  Q
    | |||||||| ||| ||||||||||||    
T  18779979 tgtatatgatcggtaattgttcatgat 18780005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 35792938 - 35793065
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatg 237  Q
    |||||||||||||||||||||||||||| |||| | ||||||||| |||| ||| | |||||||||||||||||| ||||||||| ||||||||||||||    
T  35792938 tatttgtgaattgataattgttcatgaaatatgcttaatgattgtgcatggcttatcattggtgattgttcatgatgtatatgattggtgattgttcatg 35793037  T
Q  238 atatatatgattggtgattgttcatgat 265  Q
    || |||||||| ||| ||||||||||||    
T  35793038 atgtatatgatcggtaattgttcatgat 35793065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 11341020 - 11340914
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgata--tatatgattgg 251  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||    
T  11341020 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatatgtatatgattgg 11340921  T
Q  252 tgattgt 258  Q
    |||||||    
T  11340920 tgattgt 11340914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 10697 - 10619
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  10697 tgatcggtgattgttcatgatgtatatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatat 10619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 10671 - 10606
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  10671 tgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatatgattggtgattgt 10606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 19498184 - 19498107
Alignment:
Q  155 attgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||| |||||||||    
T  19498184 attgttcatgaaatatgataatgattgttcatggcttatgatttgtgattgttcatgaagtatatgattggtgattgt 19498107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 35793019 - 35793090
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| || | ||||||||||||||||||    
T  35793019 tgattggtgattgttcatgatgtatatgatcggtaattgttcatgatacatgtaattggtgattgttcatga 35793090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 10556 - 10478
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  10556 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 10478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 1221582 - 1221660
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  1221582 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 1221660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 18779959 - 18780030
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| |  | ||||||||||||||||||    
T  18779959 tgattggtgattgttcatgatgtatatgatcggtaattgttcatgatacaagtaattggtgattgttcatga 18780030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 18779931 - 18779985
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  18779931 tatgattggtgattgttcatgatgtatatgattggtgattgttcatgatgtatat 18779985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 43445652 - 43445730
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||| ||||||||| ||||||||| |||||||||    
T  43445652 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgactgttcatgatgtatatgattggtgattgt 43445730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 17473644 - 17473708
Alignment:
Q  155 attgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatat 219  Q
    |||||||||||| |||||||||||||||||||| ||| ||||| |||||||||||||| ||||||    
T  17473644 attgttcatgaaatatgataatgattgttcatggcttatgatttgtgattgttcatgaagtatat 17473708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 22885007 - 22885063
Alignment:
Q  202 attgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||    
T  22885007 attgttcatgatgtatatgatcggtgattgttcatgatgtatatgattggtggttgt 22885063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 35792998 - 35793045
Alignment:
Q  224 ggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  35792998 ggtgattgttcatgatgtatatgattggtgattgttcatgatgtatat 35793045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 10896 - 10854
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10896 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 10854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 16534723 - 16534669
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  16534723 tatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatat 16534669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 22368281 - 22368359
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| |||  ||||||||| ||||||||| ||||||||| |||||||||    
T  22368281 attgttcatgaaatatgattaatgattgttcatggcttaggattggtgagtgttcatgatgtatatgattggtgattgt 22368359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 25425167 - 25425125
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25425167 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 25425125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 29192350 - 29192392
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29192350 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 29192392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 29192522 - 29192576
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  29192522 tatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatat 29192576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 4201699 - 4201739
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4201699 atgcatttatgtgtccataagtgcatatcatagcatgagtc 4201739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 20615158 - 20615118
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20615158 atgcatttatgtgtccataagtgcatatcatagcatgagtc 20615118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 21075221 - 21075261
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21075221 atgcatttatgtgtccataagtgcatatcatagcatgagtc 21075261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 24595046 - 24595006
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24595046 atgcatttatgtgtccataagtgcatatcatagcatgagtc 24595006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 25902058 - 25902098
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25902058 atgcatttatgtgtccataagtgcatatcatagcatgagtc 25902098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 37051530 - 37051490
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37051530 atgcatttatgtgtccataagtgcatatcatagcatgagtc 37051490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 265
Target Start/End: Complemental strand, 11341022 - 11340935
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgat 265  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| |||||||||||||||| |||||||| ||||||||||||||||    
T  11341022 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgatcggtgattgttcatgat 11340935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 34937894 - 34937810
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    |||||||||||||||| ||||||||||||||||||||   || |||| |||||||||||||   |  ||||||||||||||||||||||    
T  34937894 tgattgttcatgacttatgattggtgattgttcatga--aatgtgattggtgattgttcat--aacttatgattggtgattgttcatga 34937810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 110858 - 110910
Alignment:
Q  180 tgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  110858 tgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 110910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 11341181 - 11341141
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  11341181 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 11341141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 16534852 - 16534812
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  16534852 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 16534812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 21933892 - 21933932
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  21933892 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 21933932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 21940062 - 21940102
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  21940062 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 21940102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 23327498 - 23327458
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  23327498 atgcatttatgggtccataagtgcatatcatagcatgagtc 23327458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 25424994 - 25424942
Alignment:
Q  219 tgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||| |||||||||||||||| ||||||||  |||||||||||||||||||||    
T  25424994 tgattggtgattgttcatgatgtatatgatcagtgattgttcatgatgtatat 25424942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 27008557 - 27008517
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  27008557 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 27008517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 35580800 - 35580760
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  35580800 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 35580760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 37010896 - 37010936
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  37010896 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 37010936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 10558 - 10478
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| |||||||||||||||| ||||||||||||||||||    
T  10558 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgattggtgattgt 10478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 1221580 - 1221660
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| |||||||||||||||| ||||||||||||||||||    
T  1221580 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgattggtgattgt 1221660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 22885007 - 22885050
Alignment:
Q  228 attgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  22885007 attgttcatgatgtatatgatcggtgattgttcatgatgtatat 22885050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 10779912 - 10779954
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  10779912 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 10779954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 10780071 - 10780134
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||||||||||||   |||||||   |||||||||||||| ||||||||||||||||||    
T  10780071 tgattggtgattgttcatgaa--atatgattaatgattgttcatgatgtatatgattggtgattgt 10780134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 19498345 - 19498303
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  19498345 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 19498303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 22368217 - 22368259
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  22368217 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 22368259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 23510460 - 23510418
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  23510460 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 23510418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 110869 - 110910
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  110869 tatgattggtgattgttcatgatgtatatgattggtgattgt 110910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 21235142 - 21235179
Alignment:
Q  23 catttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  21235142 catttatgtgtccataagtgcatatcataacatgagtc 21235179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 21653135 - 21653202
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    ||||||||||||||||||||   || |||| ||||||||||||||| ||||  |||||||||||||||||||    
T  21653135 tgattggtgattgttcatgaa--atgtgattggtgattgttcatgaaatat--gattggtgattgttcatga 21653202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 21653142 - 21653202
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||  | ||||||||||||||||||||   ||||||| |||||||||||||||    
T  21653142 tgattgttcatgaaatgtgattggtgattgttcatga--aatatgattggtgattgttcatga 21653202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 110717 - 110759
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  110717 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 110759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 7424142 - 7424108
Alignment:
Q  26 ttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||| |||||||||||||||||||||||||    
T  7424142 ttatgtgtcaataagtgcatatcatagcatgagtc 7424108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 9732551 - 9732614
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||||||||||||   |||||||   ||| |||||||||| ||||||||||||||||||    
T  9732551 tgattggtgattgttcatgaa--atatgattaatgactgttcatgatgtatatgattggtgattgt 9732614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 18779803 - 18779845
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  18779803 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 18779845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 21661347 - 21661389
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  21661347 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 21661389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 22884916 - 22884958
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  22884916 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 22884958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 27185457 - 27185499
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  27185457 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 27185499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 35792863 - 35792905
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  35792863 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 35792905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 43445490 - 43445532
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||    
T  43445490 atgcatttatgtgtcaataagtgcatatcataacatgaatctt 43445532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 43445651 - 43445730
Alignment:
Q  177 gattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||||  | |||||  ||||||||||||  |  |||||| ||||| |||||||||| ||||||||||||||||||    
T  43445651 gattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgactgttcatgatgtatatgattggtgattgt 43445730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 11213336 - 11213377
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtct 61  Q
    ||||||||||||||| |||||||||||||||  |||||||||    
T  11213336 atgcatttatgtgtcaataagtgcatatcatgacatgagtct 11213377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 10519 - 10491
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  10519 tatgattggtgattgttcatgatgtatat 10491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Original strand, 110869 - 110897
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  110869 tatgattggtgattgttcatgatgtatat 110897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 1221465 - 1221505
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  1221465 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 1221505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Original strand, 1221619 - 1221647
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  1221619 tatgattggtgattgttcatgatgtatat 1221647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 10780078 - 10780134
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||||  | |||||  ||||||||||||| ||||||||| |||||||||    
T  10780078 tgattgttcatgaaatatgattaatgattgttcatgatgtatatgattggtgattgt 10780134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 11340983 - 11340955
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  11340983 tatgattggtgattgttcatgatgtatat 11340955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 25211625 - 25211665
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  25211625 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 25211665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 25275777 - 25275817
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  25275777 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 25275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 18246614 - 18246482
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18246614 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgatgtatatgatcggtgattgttcatga 18246515  T
Q  239 tatatatgattggtgattgttcatgatgtatat 271  Q
    | |||||||||||||||||||||||||||||||    
T  18246514 tgtatatgattggtgattgttcatgatgtatat 18246482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 16521194 - 16521067
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattg-------ttcatgaggtatatgatcggtgatt 230  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||||||       ||||||| |||||||||||||||||    
T  16521194 tatttgtgaattgataattgttcatgaaatatgattaatgattgttcatggcttatgattggtgattggtgattgttcatgatgtatatgatcggtgatt 16521095  T
Q  231 gttcatgatatatatgattggtgattgt 258  Q
    |||||||||  |||||||||||||||||    
T  16521094 gttcatgatgcatatgattggtgattgt 16521067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 18246534 - 18246456
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||| ||||||||  |||||||||||||||||||||    
T  18246534 tgatcggtgattgttcatgatgtatatgattggtgattgttcatgatgtatatgatccgtgattgttcatgatgtatat 18246456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 26678433 - 26678348
Alignment:
Q  148 attgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||| |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  26678433 attggtaattgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 26678348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 7134254 - 7134332
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  7134254 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 7134332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 18246508 - 18246446
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgat 255  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||    
T  18246508 tgattggtgattgttcatgatgtatatgatccgtgattgttcatgatgtatatgattggtgat 18246446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 19998909 - 19998832
Alignment:
Q  155 attgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||||||||||||||||| ||| ||||| | |||||||||||| ||||||||| |||||||||    
T  19998909 attgttcatgaaatatgataatgattgttcatggcttatgatttgcgattgttcatgaagtatatgattggtgattgt 19998832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 7134206 - 7134319
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtg 253  Q
    |||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||   |||||||   ||||||||||||     |||||||||||    
T  7134206 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatga--aatatgattaatgattgttcatg--gcttatgattggtg 7134301  T
Q  254 attgttcatgatgtatat 271  Q
    ||||||||||||||||||    
T  7134302 attgttcatgatgtatat 7134319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 22356368 - 22356443
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgat 229  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  22356368 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgat 22356443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 8372856 - 8372778
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||| ||||||||| ||||||||| |||||||||    
T  8372856 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgactgttcatgatgtatatgattggtgattgt 8372778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 18167108 - 18167045
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||||||||||||   ||||||| |||||||||||||||| ||||||||||||||||||    
T  18167108 tgattggtgattgttcatgaa--atatgattggtgattgttcatgatgtatatgattggtgattgt 18167045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 18246733 - 18246691
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18246733 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 18246691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 10487214 - 10487174
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10487214 atgcatttatgtgtccataagtgcatatcatagcatgagtc 10487174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 16329537 - 16329577
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16329537 atgcatttatgtgtccataagtgcatatcatagcatgagtc 16329577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 22356344 - 22356443
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtg 253  Q
    |||||||||||| | |||| |||||||||||||||  | |||||  ||||||||||||  |  |||||| |||||||||||||||| |||||||||||||    
T  22356344 attgttcatgaaatgtgattaatgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgattggtg 22356441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 13049778 - 13049818
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  13049778 atgcatttatatgtccataagtgcatatcatagcatgagtc 13049818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 18167101 - 18167045
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||||  | |||||||||||||||||||| ||||||||| |||||||||    
T  18167101 tgattgttcatgaaatatgattggtgattgttcatgatgtatatgattggtgattgt 18167045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 26338025 - 26337989
Alignment:
Q  23 catttatgtgtccataagtgcatatcatagcatgagt 59  Q
    |||||||||||||||||||||||||||||||||||||    
T  26338025 catttatgtgtccataagtgcatatcatagcatgagt 26337989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 7134252 - 7134332
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| |||||||||||||||| ||||||||||||||||||    
T  7134252 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgattggtgattgt 7134332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 110025 - 109983
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  110025 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 109983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 8373016 - 8372974
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  8373016 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 8372974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 14994743 - 14994701
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  14994743 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 14994701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 15138173 - 15138215
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  15138173 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 15138215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 15274374 - 15274416
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  15274374 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 15274416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 19999070 - 19999028
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  19999070 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 19999028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 47355732 - 47355690
Alignment:
Q  229 ttgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  47355732 ttgttcctgatacatatgattggtgattgttcatgatgtatat 47355690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 18167108 - 18167058
Alignment:
Q  219 tgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||| ||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  18167108 tgattggtgattgttcatgaaatat--gattggtgattgttcatgatgtatat 18167058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 26678389 - 26678348
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  26678389 tatgattggtgattgttcatgatgtatatgattggtgattgt 26678348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 19699331 - 19699367
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatga 212  Q
    |||||||||||||||| ||||||||||||||||||||    
T  19699331 tgattgttcatgacttatgattggtgattgttcatga 19699367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 19709916 - 19709952
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatga 212  Q
    |||||||||||||||| ||||||||||||||||||||    
T  19709916 tgattgttcatgacttatgattggtgattgttcatga 19709952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 8372858 - 8372778
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| ||||| |||||||||| ||||||||||||||||||    
T  8372858 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgactgttcatgatgtatatgattggtgattgt 8372778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 5684518 - 5684560
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  5684518 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 5684560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 9293992 - 9293950
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  9293992 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 9293950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 10642654 - 10642612
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  10642654 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 10642612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 15211882 - 15211840
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||| || |||||||||||||||| ||||||||||    
T  15211882 atgcatttatgtctcaataagtgcatatcataacatgagtctt 15211840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 15288647 - 15288681
Alignment:
Q  26 ttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||| |||||||||||||||||||||||||    
T  15288647 ttatgtgtcaataagtgcatatcatagcatgagtc 15288681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 15295814 - 15295848
Alignment:
Q  26 ttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||| |||||||||||||||||||||||||    
T  15295814 ttatgtgtcaataagtgcatatcatagcatgagtc 15295848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 21961192 - 21961234
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  21961192 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 21961234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 26678587 - 26678545
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| || |||||||    
T  26678587 atgcatttatgtgtcaataagtgcatatcataacacgagtctt 26678545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 34393621 - 34393558
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||||||||||||   ||||||| |  ||||||||||||||||| ||||||| ||||||    
T  34393621 tgattggtgattgttcatgaa--atatgattgaggattgttcatgatatatgtgattggcgattgt 34393558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 44054398 - 44054356
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  44054398 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 44054356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 47355868 - 47355826
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||    
T  47355868 atgcatttatgtgtcaataagttcatatcataacatgagtctt 47355826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 7134090 - 7134130
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  7134090 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 7134130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 14950563 - 14950523
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||| ||| |||||||||||||||| ||||||||    
T  14950563 atgcatttatgggtcaataagtgcatatcatatcatgagtc 14950523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Original strand, 22356405 - 22356433
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  22356405 tatgattggtgattgttcatgatgtatat 22356433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 26678389 - 26678361
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  26678389 tatgattggtgattgttcatgatgtatat 26678361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 18909115 - 18908983
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18909115 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgatgtatatgatcggtgattgttcatga 18909016  T
Q  239 tatatatgattggtgattgttcatgatgtatat 271  Q
    | |||||||||||||||||||||||||||||||    
T  18909015 tgtatatgattggtgattgttcatgatgtatat 18908983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 22273470 - 22273338
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22273470 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgatgtatatgatcggtgattgttcatga 22273371  T
Q  239 tatatatgattggtgattgttcatgatgtatat 271  Q
    | |||||||||||||||||||||||||||||||    
T  22273370 tgtatatgattggtgattgttcatgatgtatat 22273338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 139 - 255
Target Start/End: Original strand, 2451058 - 2451174
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  2451058 tatttgtgaattgataattgttcatgaattatgataatgatggttcatgacttttgattggtgattgttcatgatgtatatgatcagtgattgttcatga 2451157  T
Q  239 tatatatgattggtgat 255  Q
    | |||||||||||||||    
T  2451158 tgtatatgattggtgat 2451174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 49230681 - 49230561
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatg 237  Q
    |||||||||||||||||||||||||||| |||||| |||||| || |||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  49230681 tatttgtgaattgataattgttcatgaaatatgattaatgatcgtgcatggcttatgattggtgattgttcatgatgtatatgatcggtgattgttcatg 49230582  T
Q  238 atatatatgattggtgattgt 258  Q
    || ||||||||||||||||||    
T  49230581 atgtatatgattggtgattgt 49230561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 19945058 - 19944976
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  19945058 tgattgttcatggcttatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatatgattggtgattgt 19944976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 18909035 - 18908957
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  18909035 tgatcggtgattgttcatgatgtatatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatat 18908957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 19945117 - 19945047
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatg 263  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19945117 tgattggtgattgtttatgatgtatatgatcggtgattgttcatgatgtatatgattggtgattgttcatg 19945047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 16259513 - 16259412
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatg 237  Q
    ||||||| |||||||||||||||||||| |||| | ||||||||| |||| ||| |||||||||||||||||||| ||||||||| ||| ||||||||||    
T  16259513 tatttgtcaattgataattgttcatgaaatatgcttaatgattgtgcatggcttatgattggtgattgttcatgatgtatatgattggtaattgttcatg 16259414  T
Q  238 at 239  Q
    ||    
T  16259413 at 16259412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 18909009 - 18908944
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  18909009 tgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatatgattggtgattgt 18908944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 22273390 - 22273312
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||| ||||||||  |||||||||||||||||||||    
T  22273390 tgatcggtgattgttcatgatgtatatgattggtgattgttcatgatgtatatgatcagtgattgttcatgatgtatat 22273312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 16819297 - 16819212
Alignment:
Q  148 attgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||| |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  16819297 attggtaattgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 16819212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 7852091 - 7852013
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  7852091 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 7852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 22273364 - 22273302
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgat 255  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||    
T  22273364 tgattggtgattgttcatgatgtatatgatcagtgattgttcatgatgtatatgattggtgat 22273302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 19945065 - 19944989
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||  |  |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  19945065 tgattggtgattgttcatg--gcttatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatat 19944989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 11813050 - 11812972
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| ||||||| |||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  11813050 attgttcatgaaatatgattaatgattattcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 11812972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 2450939 - 2450981
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2450939 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 2450981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 18909234 - 18909192
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18909234 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 18909192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 22273589 - 22273547
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22273589 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 22273547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 49230628 - 49230574
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  49230628 tatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatat 49230574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 8270015 - 8270055
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8270015 atgcatttatgtgtccataagtgcatatcatagcatgagtc 8270055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 8277126 - 8277166
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8277126 atgcatttatgtgtccataagtgcatatcatagcatgagtc 8277166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 8305935 - 8305975
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8305935 atgcatttatgtgtccataagtgcatatcatagcatgagtc 8305975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 13956417 - 13956457
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13956417 atgcatttatgtgtccataagtgcatatcatagcatgagtc 13956457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 13977250 - 13977290
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13977250 atgcatttatgtgtccataagtgcatatcatagcatgagtc 13977290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 16259460 - 16259408
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtat 269  Q
    |||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  16259460 tatgattggtgattgttcatgatgtatatgattggtaattgttcatgatgtat 16259408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 16745783 - 16745823
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16745783 atgcatttatgtgtccataagtgcatatcatagcatgagtc 16745823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 30151878 - 30151838
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30151878 atgcatttatgtgtccataagtgcatatcatagcatgagtc 30151838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 41268783 - 41268743
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41268783 atgcatttatgtgtccataagtgcatatcatagcatgagtc 41268743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 45859561 - 45859521
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  45859561 atgcatttatgtgtccataagtgcatatcatagcatgagtc 45859521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 53769202 - 53769162
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  53769202 atgcatttatgtgtccataagtgcatatcatagcatgagtc 53769162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 55314923 - 55314883
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  55314923 atgcatttatgtgtccataagtgcatatcatagcatgagtc 55314883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 1469265 - 1469305
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  1469265 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 1469305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 2451112 - 2451164
Alignment:
Q  219 tgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||| |||||||||||||||| ||||||||  |||||||||||||||||||||    
T  2451112 tgattggtgattgttcatgatgtatatgatcagtgattgttcatgatgtatat 2451164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 19945117 - 19945065
Alignment:
Q  219 tgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||| |||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  19945117 tgattggtgattgtttatgatgtatatgatcggtgattgttcatgatgtatat 19945065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 44227969 - 44227929
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  44227969 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 44227929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 7852093 - 7852013
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| |||||||||||||||| ||||||||||||||||||    
T  7852093 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgattggtgattgt 7852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 11813092 - 11812972
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataat----gattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttc 234  Q
    |||||||||||||||| |||||||||||  ||| ||||    ||||||||||||  | |||||  ||||| ||||||  |  |||||| |||||||||||    
T  11813092 tatttgtgaattgatatttgttcatgaaacatg-taattggtgattgttcatgaaatatgattaatgattattcatg--gcttatgattggtgattgttc 11812996  T
Q  235 atgatatatatgattggtgattgt 258  Q
    ||||| ||||||||||||||||||    
T  11812995 atgatgtatatgattggtgattgt 11812972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 12266102 - 12266144
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  12266102 atgcatttatgtgtcaataagtgcatatcatatcatgagtctt 12266144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 14846274 - 14846316
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  14846274 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 14846316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 15574589 - 15574547
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  15574589 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 15574547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 15613608 - 15613566
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  15613608 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 15613566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 16819451 - 16819409
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  16819451 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 16819409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 18905369 - 18905411
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  18905369 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 18905411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 19262630 - 19262672
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  19262630 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 19262672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 23081777 - 23081819
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  23081777 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 23081819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 16819253 - 16819212
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  16819253 tatgattggtgattgttcatgatgtatatgattggtgattgt 16819212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 27839249 - 27839209
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  27839249 atgcatttatgagtcaataagtgcatatcatagcatgagtc 27839209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 9304571 - 9304610
Alignment:
Q  173 taatgattgttcatgacttttgattggtgattgttcatga 212  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  9304571 taatgattgttcatggcttatgattggtgattgttcatga 9304610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 38166424 - 38166385
Alignment:
Q  219 tgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  38166424 tgattggtgattgttcatgatgtatatgattggtgattgt 38166385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 38166424 - 38166385
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  38166424 tgattggtgattgttcatgatgtatatgattggtgattgt 38166385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 319237 - 319279
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  319237 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 319279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 2048603 - 2048561
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  2048603 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 2048561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 5227260 - 5227218
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||    
T  5227260 atgcatttatgtgtcaataagtgcataacataacatgagtctt 5227218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 8630382 - 8630340
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  8630382 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 8630340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 15470076 - 15470118
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||| ||||||    
T  15470076 atgcatttatgtgtcaataagtgcatatcataacataagtctt 15470118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 17913865 - 17913907
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  17913865 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 17913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 17936690 - 17936627
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||| ||||||||||||  | ||||||| ||  ||||||||||||||||||||||||| |||||    
T  17936690 tgattgatgattgttcatg--gaatatgatggggtattgttcatgatatatatgattggtaattgt 17936627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 19945171 - 19945129
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  19945171 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 19945129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 23491048 - 23491006
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  23491048 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 23491006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 25057315 - 25057273
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  25057315 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 25057273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 49230756 - 49230714
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  49230756 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 49230714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 10737097 - 10737060
Alignment:
Q  24 atttatgtgtccataagtgcatatcatagcatgagtct 61  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  10737097 atttatgtgtcaataagtgcatatcataacatgagtct 10737060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 7852054 - 7852026
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  7852054 tatgattggtgattgttcatgatgtatat 7852026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 9304522 - 9304562
Alignment:
Q  224 ggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    ||||||||||||||| ||||||||||||||| | |||||||    
T  9304522 ggtgattgttcatgacatatatgattggtgaattttcatga 9304562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 11813013 - 11812985
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  11813013 tatgattggtgattgttcatgatgtatat 11812985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 15516115 - 15516051
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattg 257  Q
    |||||| |||||||||||||   || |||| | ||||||||||||||| || |||||||||||||    
T  15516115 tgattgatgattgttcatgataaatgtgattgatgattgttcatgatacatgtgattggtgattg 15516051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 16259460 - 16259432
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  16259460 tatgattggtgattgttcatgatgtatat 16259432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 16819253 - 16819225
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  16819253 tatgattggtgattgttcatgatgtatat 16819225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 30141187 - 30141155
Alignment:
Q  226 tgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||| ||||||||||||||||||    
T  30141187 tgattgttcatgatgtatatgattggtgattgt 30141155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 30141316 - 30141227
Alignment:
Q  148 attgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||| ||||| |||||| | |||| ||||| ||||||||   | |||||||||||||||||||  | ||||||| |||||||||||||||    
T  30141316 attgatgattgtccatgaaatgtgattaatgaatgttcatggaatatgattggtgattgttcatg--gaatatgattggtgattgttcatga 30141227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 30141427 - 30141387
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  30141427 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 30141387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 1e-59; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 25173986 - 25173858
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  25173986 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattcttcatgatgtatatgatcggtgattgttcatga 25173887  T
Q  239 tatatatgattggtgattgttcatgatgt 267  Q
    | |||||||||||||||||||||||||||    
T  25173886 tgtatatgattggtgattgttcatgatgt 25173858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 25173853 - 25173796
Alignment:
Q  214 gtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25173853 gtatatgatcggtgattgttcatgatgtatatgattggtgattgttcatgatgtatat 25173796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 18579083 - 18579005
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||| ||||||| ||||||||| |||||||||    
T  18579083 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattcttcatgatgtatatgattggtgattgt 18579005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 25173848 - 25173786
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgat 255  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||    
T  25173848 tgatcggtgattgttcatgatgtatatgattggtgattgttcatgatgtatatgattggtgat 25173786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 18825606 - 18825675
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    ||||||||||||||||||||   || |||| |||||||||||||||| ||||||||||||||||||||||||    
T  18825606 tgattggtgattgttcatgaa--atgtgattggtgattgttcatgatgtatatgattggtgattgttcatga 18825675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 264
Target Start/End: Complemental strand, 18128686 - 18128578
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtg 253  Q
    |||||||||||||| |||| |||||||||||||||  |  |||||||||||||||||||   || ||||   ||||||||||||||| || |||||||||    
T  18128686 attgttcatgaattgtgattaatgattgttcatgaaatgagattggtgattgttcatgaa--atgtgattaatgattgttcatgataaatgtgattggtg 18128589  T
Q  254 attgttcatga 264  Q
    |||||||||||    
T  18128588 attgttcatga 18128578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 18825613 - 18825675
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||  | |||||||||||||||||||| ||||||||| |||||||||||||||    
T  18825613 tgattgttcatgaaatgtgattggtgattgttcatgatgtatatgattggtgattgttcatga 18825675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 23975958 - 23975880
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| |||  ||||||||| ||||||||| ||||||||| |||||||||    
T  23975958 attgttcatgaaatatgattaatgattgttcatggcttaagattggtgagtgttcatgatgtatatgattggtgattgt 23975880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 25174105 - 25174063
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25174105 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 25174063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 27655699 - 27655741
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27655699 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 27655741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 16230130 - 16230090
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16230130 atgcatttatgtgtccataagtgcatatcatagcatgagtc 16230090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 16650859 - 16650899
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16650859 atgcatttatgtgtccataagtgcatatcatagcatgagtc 16650899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 23993710 - 23993670
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23993710 atgcatttatgtgtccataagtgcatatcatagcatgagtc 23993670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 29871088 - 29871128
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29871088 atgcatttatgtgtccataagtgcatatcatagcatgagtc 29871128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 33316348 - 33316435
Alignment:
Q  148 attgataattgttcat--gaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||| |||||||||||  ||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||| ||||| |||||||||    
T  33316348 attggtaattgttcatatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtaaatgattggtgattgt 33316435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 16557632 - 16557669
Alignment:
Q  23 catttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16557632 catttatgtgtccataagtgcatatcatagcatgagtc 16557669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 16642627 - 16642664
Alignment:
Q  23 catttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16642627 catttatgtgtccataagtgcatatcatagcatgagtc 16642664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 4989305 - 4989253
Alignment:
Q  180 tgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  4989305 tgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 4989253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 10487429 - 10487389
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  10487429 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 10487389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 16377898 - 16377938
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  16377898 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 16377938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 16385222 - 16385262
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  16385222 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 16385262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 258
Target Start/End: Original strand, 18843621 - 18843730
Alignment:
Q  148 attgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatg 246  Q
    |||||| ||||| |||||| | |||| ||||| ||||||||   | ||| ||||||||||||||||   || |||| |||||||||||||||| ||||||    
T  18843621 attgatgattgtccatgaaatgtgattaatgaatgttcatggaatatgactggtgattgttcatgaa--atgtgattggtgattgttcatgatgtatatg 18843718  T
Q  247 attggtgattgt 258  Q
    ||||||||||||    
T  18843719 attggtgattgt 18843730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 22227291 - 22227331
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  22227291 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 22227331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 25173932 - 25173880
Alignment:
Q  219 tgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||| ||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  25173932 tgattggtgattcttcatgatgtatatgatcggtgattgttcatgatgtatat 25173880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 18128590 - 18128510
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||| ||||||||||||  | ||||||| || ||||||||||||||||| |||||||| |||||    
T  18128590 tgattgttcatgaaatgtgattgatgattgttcatg--gaatatgattggggattgttcatgatatatgtgattggtaattgt 18128510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 1651561 - 1651603
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  1651561 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 1651603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 11214688 - 11214646
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  11214688 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 11214646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 18004816 - 18004879
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||||||||||||   |||||||   |||||||||||||| ||||||||||||||||||    
T  18004816 tgattggtgattgttcatgaa--atatgattaatgattgttcatgatgtatatgattggtgattgt 18004879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 18128760 - 18128676
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    |||||||||||||  | |||||| ||||||||||||  | ||||||| ||||||||||||||| || |  |||||||||||||||||||    
T  18128760 tgattgttcatgaaatgtgattgatgattgttcatg--gaatatgattggtgattgttcatgaaatgt--gattggtgattgttcatga 18128676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 23976118 - 23976076
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  23976118 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 23976076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 33316195 - 33316237
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  33316195 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 33316237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 4989294 - 4989253
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  4989294 tatgattggtgattgttcatgatgtatatgattggtgattgt 4989253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 18825603 - 18825656
Alignment:
Q  216 atatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    ||||||| ||||||||||||||| || |  ||||||||||||||||||||||||||    
T  18825603 atatgattggtgattgttcatgaaatgt--gattggtgattgttcatgatgtatat 18825656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 19627773 - 19627737
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatga 212  Q
    |||||||||||||||| ||||||||||||||||||||    
T  19627773 tgattgttcatgacttatgattggtgattgttcatga 19627737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 26088384 - 26088344
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  26088384 atgcatttatgcgtccataagtgcatatcataacatgagtc 26088344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 35011041 - 35011077
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatga 212  Q
    |||||||||||||||| ||||||||||||||||||||    
T  35011041 tgattgttcatgacttatgattggtgattgttcatga 35011077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 15861282 - 15861243
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagt 59  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  15861282 atgcatttatgtgtcaataagtgcatatcataacatgagt 15861243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 16827644 - 16827683
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgatt 256  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  16827644 tatgattggtgattgttcatgatttatatgattggtgatt 16827683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 18579085 - 18579005
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| ||||||| |||||||| ||||||||||||||||||    
T  18579085 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattcttcatgatgtatatgattggtgattgt 18579005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 1554390 - 1554348
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||    
T  1554390 atgcatttatgcgtcaataagtgcatatcataacatgagtctt 1554348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 1659322 - 1659364
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  1659322 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 1659364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 4989446 - 4989404
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  4989446 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 4989404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 14628224 - 14628266
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  14628224 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 14628266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 16827633 - 16827683
Alignment:
Q  180 tgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgatt 230  Q
    |||||||| ||| ||||||||||||||||||||  |||||||| |||||||    
T  16827633 tgttcatggcttatgattggtgattgttcatgatttatatgattggtgatt 16827683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 18004664 - 18004706
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  18004664 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 18004706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 18088407 - 18088441
Alignment:
Q  26 ttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||| |||||||||||||||||||||||||    
T  18088407 ttatgtgtcaataagtgcatatcatagcatgagtc 18088441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 19984819 - 19984861
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  19984819 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 19984861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 22428715 - 22428673
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  22428715 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 22428673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 32896537 - 32896495
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  32896537 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 32896495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 33316394 - 33316435
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||| |||||||||||||||| || |||||||||||||||    
T  33316394 tatgattggtgattgttcatgatgtaaatgattggtgattgt 33316435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 4989294 - 4989266
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  4989294 tatgattggtgattgttcatgatgtatat 4989266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 18004823 - 18004879
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||||  | |||||  ||||||||||||| ||||||||| |||||||||    
T  18004823 tgattgttcatgaaatatgattaatgattgttcatgatgtatatgattggtgattgt 18004879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 18825449 - 18825489
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  18825449 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 18825489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 18843672 - 18843717
Alignment:
Q  224 ggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    ||||||||||||||| || |  ||||||||||||||||||||||||||    
T  18843672 ggtgattgttcatgaaatgt--gattggtgattgttcatgatgtatat 18843717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 139 - 271
Target Start/End: Original strand, 19888510 - 19888642
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  19888510 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgactttggattggtgattgttcatgatgtatatgatcggtgattgttcatga 19888609  T
Q  239 tatatatgattggtgattgttcatgatgtatat 271  Q
    | ||||||||  |||||||||||||||||||||    
T  19888610 tgtatatgatcagtgattgttcatgatgtatat 19888642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 25211330 - 25211197
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatg 237  Q
    |||||||||||||||||||| | ||||| |||||| ||||||||| |||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  25211330 tatttgtgaattgataattgcttatgaaatatgattaatgattgtgcatggcttgtgattggtgattgttcatgatgtatatgatcggtgattgttcatg 25211231  T
Q  238 atatatatgattggtgattgttcatgatgtatat 271  Q
    || |||||||||||||||||||||||||||||||    
T  25211230 atgtatatgattggtgattgttcatgatgtatat 25211197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 8942070 - 8941980
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgat 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  8942070 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgatgtatatgattggtgat 8941980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 3800887 - 3800991
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtg 253  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||    
T  3800887 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgatcagtgattgttcatgatgtatatgattggtg 3800986  T
Q  254 attgt 258  Q
    |||||    
T  3800987 attgt 3800991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 25211249 - 25211171
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  25211249 tgatcggtgattgttcatgatgtatatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatat 25211171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 25211223 - 25211158
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  25211223 tgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatatgattggtgattgt 25211158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 12643756 - 12643834
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  12643756 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 12643834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 19888590 - 19888652
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgat 255  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||    
T  19888590 tgatcggtgattgttcatgatgtatatgatcagtgattgttcatgatgtatatgattggtgat 19888652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 19888391 - 19888433
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19888391 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 19888433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 8942188 - 8942147
Alignment:
Q  21 tgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8942188 tgcatttatgtgtccataagtgcatatcatagcatgagtctt 8942147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 21276287 - 21276364
Alignment:
Q  155 attgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||||| || |||| ||| ||| ||| |||||||||||||||| ||||||||| |||||||||    
T  21276287 attgttcatgaaatatgataacgaatgtttatggcttatgagtggtgattgttcatgatgtatatgattggtgattgt 21276364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 3800885 - 3800978
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| |||||||||||||||| ||||||||  |||||||||||||||||||||    
T  3800885 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgatcagtgattgttcatgatgtatat 3800978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 12726596 - 12726556
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12726596 atgcatttatgtgtccataagtgcatatcatagcatgagtc 12726556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 17398209 - 17398249
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17398209 atgcatttatgtgtccataagtgcatatcatagcatgagtc 17398249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 20013666 - 20013626
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20013666 atgcatttatgtgtccataagtgcatatcatagcatgagtc 20013626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 23773080 - 23773040
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23773080 atgcatttatgtgtccataagtgcatatcatagcatgagtc 23773040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 23818723 - 23818683
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23818723 atgcatttatgtgtccataagtgcatatcatagcatgagtc 23818683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 24687282 - 24687322
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24687282 atgcatttatgtgtccataagtgcatatcatagcatgagtc 24687322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 12637938 - 12638016
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| |||  ||||||||| ||||||||| | ||||||| |||||||||    
T  12637938 attgttcatgaaatatgattaatgattgttcatggcttaagattggtgactgttcatgatgcatatgattggtgattgt 12638016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 3800726 - 3800766
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  3800726 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 3800766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 5889909 - 5889949
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  5889909 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 5889949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 11232864 - 11232904
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  11232864 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 11232904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 14908051 - 14908091
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  14908051 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 14908091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 22514711 - 22514751
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  22514711 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 22514751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 28777312 - 28777352
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  28777312 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 28777352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 34822741 - 34822701
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  34822741 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 34822701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 12643754 - 12643834
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| |||||||||||||||| ||||||||||||||||||    
T  12643754 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgattggtgattgt 12643834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 12637778 - 12637820
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  12637778 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 12637820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 21140420 - 21140378
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  21140420 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 21140378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 21276140 - 21276182
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  21276140 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 21276182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 24828174 - 24828216
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  24828174 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 24828216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 24832626 - 24832668
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  24832626 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 24832668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 25211423 - 25211381
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  25211423 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 25211381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 7513780 - 7513816
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatga 212  Q
    |||||||||||||||| ||||||||||||||||||||    
T  7513780 tgattgttcatgacttatgattggtgattgttcatga 7513816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 42180127 - 42180163
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatga 212  Q
    |||||||||||||||| ||||||||||||||||||||    
T  42180127 tgattgttcatgacttatgattggtgattgttcatga 42180163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 6877979 - 6877936
Alignment:
Q  19 aatgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||| |||||||||||||||  ||||||||||    
T  6877979 aatgcatttatgtgtcaataagtgcatatcatgacatgagtctt 6877936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 8886676 - 8886634
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  8886676 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 8886634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 15631832 - 15631798
Alignment:
Q  216 atatgatcggtgattgttcatgatatatatgattg 250  Q
    ||||||| |||||||||||||||||||||||||||    
T  15631832 atatgattggtgattgttcatgatatatatgattg 15631798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 258
Target Start/End: Original strand, 21276330 - 21276364
Alignment:
Q  224 ggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||||| ||||||||||||||||||    
T  21276330 ggtgattgttcatgatgtatatgattggtgattgt 21276364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 22273428 - 22273386
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  22273428 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 22273386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 22282661 - 22282619
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  22282661 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 22282619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 461152 - 461083
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    |||||||||||||||||||||  || ||||   ||||| ||||||||| || |||||||||||| |||||||    
T  461152 tgattggtgattgttcatgag--atgtgattaatgattattcatgataaatgtgattggtgattcttcatga 461083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 8942016 - 8941980
Alignment:
Q  219 tgatcggtgattgttcatgatatatatgattggtgat 255  Q
    |||| |||||||||||||||| |||||||||||||||    
T  8942016 tgattggtgattgttcatgatgtatatgattggtgat 8941980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 12643639 - 12643679
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  12643639 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 12643679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Original strand, 12643793 - 12643821
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  12643793 tatgattggtgattgttcatgatgtatat 12643821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 17147204 - 17147088
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  17147204 tatttgtgaattgataattgttcatgaattatgataatgattgttcatgacttttgattggtgattgttcatgatgtatatgatcagtgattgttcatga 17147105  T
Q  239 tatatatgattggtgat 255  Q
    | |||||||||||||||    
T  17147104 tgtatatgattggtgat 17147088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 15863123 - 15863243
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatg 237  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  15863123 tatttgtgaattgataattgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgatcggtgattgttcatg 15863222  T
Q  238 atatatatgattggtgattgt 258  Q
    || ||||||||||||||||||    
T  15863223 atgtatatgattggtgattgt 15863243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 22250742 - 22250798
Alignment:
Q  202 attgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||    
T  22250742 attgttcatgatgtatatgatcggtgattgttcatgatgtatatgattggtggttgt 22250798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 7642205 - 7642247
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7642205 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 7642247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 15863176 - 15863230
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  15863176 tatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatat 15863230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 17147323 - 17147281
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17147323 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 17147281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 5073923 - 5073963
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5073923 atgcatttatgtgtccataagtgcatatcatagcatgagtc 5073963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 18602666 - 18602706
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18602666 atgcatttatgtgtccataagtgcatatcatagcatgagtc 18602706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 20826844 - 20826884
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20826844 atgcatttatgtgtccataagtgcatatcatagcatgagtc 20826884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 22034390 - 22034350
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22034390 atgcatttatgtgtccataagtgcatatcatagcatgagtc 22034350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 51451155 - 51451115
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  51451155 atgcatttatgtgtccataagtgcatatcatagcatgagtc 51451115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 17003367 - 17003327
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  17003367 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 17003327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 17147150 - 17147098
Alignment:
Q  219 tgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||| |||||||||||||||| ||||||||  |||||||||||||||||||||    
T  17147150 tgattggtgattgttcatgatgtatatgatcagtgattgttcatgatgtatat 17147098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 21651632 - 21651672
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  21651632 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 21651672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 41392994 - 41392954
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  41392994 atgcatttatgtgtccataagtgcatatcatagtatgagtc 41392954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 20252641 - 20252581
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||||| ||||||||||||||||||||   || |||| |||||||||||||||    
T  20252641 tgattgttcatgacttatgattggtgattgttcatga--aatgtgattggtgattgttcatga 20252581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 22250742 - 22250785
Alignment:
Q  228 attgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  22250742 attgttcatgatgtatatgatcggtgattgttcatgatgtatat 22250785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 22226524 - 22226482
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  22226524 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 22226482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 35935195 - 35935237
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  35935195 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 35935237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 20589862 - 20589946
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcat 262  Q
    |||||||||||||  | |||||| ||||||||||||  | ||||||| | ||||||||||||||| || |||||  |||||||||||    
T  20589862 tgattgttcatgaaatgtgattgatgattgttcatg--gaatatgattgatgattgttcatgataaatgtgattaatgattgttcat 20589946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 41217797 - 41217717
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  |||||||||||||   ||||||| |  ||||||||||||||||| ||||||||||||||    
T  41217797 tgattgttcatgaaatgtgattaatgattgttcatgaa--atatgattgaggattgttcatgatatatgtgattggtgattgt 41217717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 15863048 - 15863090
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  15863048 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 15863090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 20930014 - 20929972
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  20930014 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 20929972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 22352509 - 22352446
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||||||||||||   ||||||| | ||||| ||||||||| || ||||||||||||||    
T  22352509 tgattggtgattgttcatgaa--atatgattgatgattattcatgataaatgtgattggtgattgt 22352446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 22352669 - 22352627
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  22352669 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 22352627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 29137356 - 29137322
Alignment:
Q  26 ttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||| |||||||||||||||||||||||||    
T  29137356 ttatgtgtcaataagtgcatatcatagcatgagtc 29137322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 35053376 - 35053334
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  35053376 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 35053334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 45050229 - 45050187
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| | |||||||||||||| ||||||||||    
T  45050229 atgcatttatgtgtcaacaagtgcatatcataacatgagtctt 45050187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 20252648 - 20252581
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    ||||||||||||||||||||  |||  ||| ||||||||||||||| || |  |||||||||||||||||||    
T  20252648 tgattggtgattgttcatgacttat--gattggtgattgttcatgaaatgt--gattggtgattgttcatga 20252581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 94; Significance: 6e-46; HSPs: 3)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 839 - 706
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatg 237  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| |||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  839 tatttgtgaattgataattgttcatgaaatatgattaatgattgtgcatggcttatgattggtgattgttcatgatgtatatgattggtgattgttcatg 740  T
Q  238 atatatatgattggtgattgttcatgatgtatat 271  Q
    || |||||||| ||||||||||||||||||||||    
T  739 atgtatatgatcggtgattgttcatgatgtatat 706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 758 - 693
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  758 tgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatatgattggtgattgt 693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 914 - 872
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  914 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 94; Significance: 6e-46; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 139 - 271
Target Start/End: Original strand, 109773 - 109906
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatg 237  Q
    |||||||||||||||||||||||||||  |||||| ||||||||| |||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  109773 tatttgtgaattgataattgttcatgagatatgattaatgattgtgcatggcttatgattggtgattgttcatgatgtatatgatcggtgattgttcatg 109872  T
Q  238 atatatatgattggtgattgttcatgatgtatat 271  Q
    || |||||||| ||||||||||||||||||||||    
T  109873 atgtatatgatcggtgattgttcatgatgtatat 109906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 109854 - 109919
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  109854 tgatcggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatatgattggtgattgt 109919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 54184 - 54142
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  54184 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 54142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 91; Significance: 4e-44; HSPs: 3)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 17057 - 16939
Alignment:
Q  141 tttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgat 239  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  17057 tttgtgaattgataattgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgatcggtgattgttcatgat 16958  T
Q  240 atatatgattggtgattgt 258  Q
     ||||||||||||||||||    
T  16957 gtatatgattggtgattgt 16939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 17006 - 16952
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  17006 tatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatat 16952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 17115 - 17075
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  17115 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 17075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 9e-36; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 28836358 - 28836258
Alignment:
Q  171 gataatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtata 270  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||   ||||||||||||| |||||    
T  28836358 gataatgattgttcatgacttttgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatatgataaatgattgttcatgacgtata 28836259  T
Q  271 t 271  Q
    |    
T  28836258 t 28836258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 13664494 - 13664572
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    ||||||| |||| |||||| |||||||||||||| ||| ||| |||||||||||||||| ||||||||| |||||||||    
T  13664494 attgttcgtgaaatatgattaatgattgttcatggcttatgagtggtgattgttcatgatgtatatgattggtgattgt 13664572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 13723769 - 13723847
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    ||||||| |||| |||||| |||||||||||||| ||| ||| |||||||||||||||| ||||||||| |||||||||    
T  13723769 attgttcgtgaaatatgattaatgattgttcatggcttatgagtggtgattgttcatgatgtatatgattggtgattgt 13723847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 23509317 - 23509239
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||| | ||||||| ||||||||| |||||||||    
T  23509317 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgaatattcatgatgtatatgattggtgattgt 23509239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 224776 - 224816
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  224776 atgcatttatgtgtccataagtgcatatcatagcatgagtc 224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 738399 - 738439
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  738399 atgcatttatgtgtccataagtgcatatcatagcatgagtc 738439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 862294 - 862334
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  862294 atgcatttatgtgtccataagtgcatatcatagcatgagtc 862334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 15320673 - 15320713
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15320673 atgcatttatgtgtccataagtgcatatcatagcatgagtc 15320713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 15501042 - 15501082
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15501042 atgcatttatgtgtccataagtgcatatcatagcatgagtc 15501082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 16675939 - 16675979
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16675939 atgcatttatgtgtccataagtgcatatcatagcatgagtc 16675979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 16874552 - 16874592
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16874552 atgcatttatgtgtccataagtgcatatcatagcatgagtc 16874592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 22090057 - 22090097
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22090057 atgcatttatgtgtccataagtgcatatcatagcatgagtc 22090097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 24662859 - 24662899
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24662859 atgcatttatgtgtccataagtgcatatcatagcatgagtc 24662899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 43684198 - 43684158
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  43684198 atgcatttatgtgtccataagtgcatatcatagcatgagtc 43684158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 24108424 - 24108487
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||||||||||||   || |||| |||||||||||||||| ||||||||||||||||||    
T  24108424 tgattggtgattgttcatgaa--atgtgattggtgattgttcatgatgtatatgattggtgattgt 24108487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 272815 - 272855
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  272815 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 272855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 643034 - 642994
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  643034 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 642994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 828840 - 828800
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  828840 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 828800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 3433189 - 3433229
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  3433189 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 3433229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 5236739 - 5236699
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  5236739 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 5236699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 24108431 - 24108487
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||||  | |||||||||||||||||||| ||||||||| |||||||||    
T  24108431 tgattgttcatgaaatgtgattggtgattgttcatgatgtatatgattggtgattgt 24108487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 16041271 - 16041331
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||||| |||||||||||||||||||||   |||||| |||||| ||||||||    
T  16041271 tgattgttcatgacttgtgattggtgattgttcatgag--ttatgattggtgatcgttcatga 16041331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 16042947 - 16043007
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||||| |||||||||||||||||||||   |||||| |||||| ||||||||    
T  16042947 tgattgttcatgacttgtgattggtgattgttcatgag--ttatgattggtgatcgttcatga 16043007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 23509462 - 23509420
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  23509462 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 23509420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 24108382 - 24108474
Alignment:
Q  175 atgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||||| |||||  | |||||| ||| ||||||||  | ||||||| ||||||||||||||| || |  ||||||||||||||||||||||||||    
T  24108382 atgattgtccatgaaatgtgattgatgaatgttcatg--gaatatgattggtgattgttcatgaaatgt--gattggtgattgttcatgatgtatat 24108474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 24547768 - 24547726
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  24547768 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 24547726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 28836310 - 28836248
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgat 255  Q
    |||| ||||||||||||||| |||||||||   |||||||||||||  |||||||||||||||    
T  28836310 tgatcggtgattgttcatgatgtatatgataaatgattgttcatgacgtatatgattggtgat 28836248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 701189 - 701229
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  701189 atgcatttttttgtccataagtgcatatcatagcatgagtc 701229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 18610703 - 18610667
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatga 212  Q
    |||||||||||||||| ||||||||||||||||||||    
T  18610703 tgattgttcatgacttatgattggtgattgttcatga 18610667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 21846104 - 21846144
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  21846104 atgcatttatgagtcaataagtgcatatcatagcatgagtc 21846144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 21853509 - 21853549
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  21853509 atgcatttatgagtcaataagtgcatatcatagcatgagtc 21853549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 13664325 - 13664367
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  13664325 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 13664367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 258
Target Start/End: Original strand, 13664538 - 13664572
Alignment:
Q  224 ggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||||| ||||||||||||||||||    
T  13664538 ggtgattgttcatgatgtatatgattggtgattgt 13664572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 13723600 - 13723642
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  13723600 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 13723642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 258
Target Start/End: Original strand, 13723813 - 13723847
Alignment:
Q  224 ggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||||| ||||||||||||||||||    
T  13723813 ggtgattgttcatgatgtatatgattggtgattgt 13723847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 22008168 - 22008210
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  22008168 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 22008210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 22909286 - 22909364
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| | |||| || ||||||||||||  | |||||  ||||||||||||| ||||||||| |||||||||    
T  22909286 attgttcatgaaatgtgattaacgattgttcatgaaatgtgattaatgattgttcatgatgtatatgattggtgattgt 22909364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 24387323 - 24387365
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  24387323 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 24387365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 24930731 - 24930773
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  24930731 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 24930773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 37605528 - 37605486
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  37605528 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 37605486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 22909175 - 22909215
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  22909175 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 22909215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 258
Target Start/End: Original strand, 22909332 - 22909364
Alignment:
Q  226 tgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||| ||||||||||||||||||    
T  22909332 tgattgttcatgatgtatatgattggtgattgt 22909364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 24108274 - 24108314
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  24108274 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 24108314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 24719171 - 24719227
Alignment:
Q  157 tgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatga 212  Q
    |||||||||| | |||| |||||||||||||||  | ||||||||||||||||||||    
T  24719171 tgttcatgaaatgtgattaatgattgttcatgaaatgtgattggtgattgttcatga 24719227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 258
Target Start/End: Original strand, 41508917 - 41508949
Alignment:
Q  226 tgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||||||| ||||||||||||||    
T  41508917 tgattgttcatgatatatgtgattggtgattgt 41508949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 29908 - 29808
Alignment:
Q  159 ttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattg 257  Q
    |||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  29908 ttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatatgattggtgattg 29809  T
Q  258 t 258  Q
    |    
T  29808 t 29808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 29875 - 29821
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  29875 tatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatat 29821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 8e-30; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 139 - 232
Target Start/End: Original strand, 15952787 - 15952881
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  15952787 tatttgtgaattgataattgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 15952881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 232
Target Start/End: Complemental strand, 2024930 - 2024836
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| | |||||||    
T  2024930 tatttgtgaattgataattgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattgatgattgt 2024836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 16416895 - 16416777
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataa-tgattgttcatgactttt--gattggtgattgttcatgaggtatatgatcggtgattgttca 235  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||  | |  ||||||||||||||||||| |||||||||| | |||||||||    
T  16416895 tatttgtgaattgataattgttcatgaattatgatcggtgattgttcatgatgtatatgattggtgattgttcatgatgtatatgatcag-gattgttca 16416797  T
Q  236 tgatatatatgattggtgat 255  Q
    |||| |||||||||||||||    
T  16416796 tgatgtatatgattggtgat 16416777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 16416879 - 16416787
Alignment:
Q  178 attgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    ||||||||||| || |||| ||||||||||||||| ||||||||| |||||||||||||||| ||||||||  | |||||||||||||||||||    
T  16416879 attgttcatgaattatgatcggtgattgttcatgatgtatatgattggtgattgttcatgatgtatatgatcag-gattgttcatgatgtatat 16416787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 2192550 - 2192628
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  2192550 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 2192628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 7286276 - 7286350
Alignment:
Q  159 ttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  7286276 ttcatgaaatatgattaatgattgttcatgacttatgattggtgattgttcatgatgtatatgattggtgattgt 7286350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 16480780 - 16480858
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    ||||||| |||| |||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  16480780 attgttcttgaagtatgattaatgattgtttatgacttatgattggtgattgttcatgatgtatatgattggtgattgt 16480858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 16417014 - 16416972
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16417014 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 16416972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 11514669 - 11514629
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11514669 atgcatttatgtgtccataagtgcatatcatagcatgagtc 11514629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 13757125 - 13757085
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13757125 atgcatttatgtgtccataagtgcatatcatagcatgagtc 13757085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 15443175 - 15443215
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15443175 atgcatttatgtgtccataagtgcatatcatagcatgagtc 15443215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 25293895 - 25293935
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25293895 atgcatttatgtgtccataagtgcatatcatagcatgagtc 25293935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 26010809 - 26010849
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26010809 atgcatttatgtgtccataagtgcatatcatagcatgagtc 26010849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 30263740 - 30263780
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30263740 atgcatttatgtgtccataagtgcatatcatagcatgagtc 30263780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 42057780 - 42057819
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagt 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42057780 atgcatttatgtgtccataagtgcatatcatagcatgagt 42057819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 7821471 - 7821431
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  7821471 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 7821431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 7828782 - 7828742
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  7828782 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 7828742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 10988158 - 10988118
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  10988158 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 10988118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 13912730 - 13912770
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  13912730 atgcatttatgtgtccgtaagtgcatatcatagcatgagtc 13912770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 15518474 - 15518514
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  15518474 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 15518514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 27103163 - 27103203
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  27103163 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 27103203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 27110511 - 27110551
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  27110511 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 27110551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 27175163 - 27175123
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  27175163 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 27175123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 38785255 - 38785295
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  38785255 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 38785295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 2192548 - 2192628
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| |||||||||||||||| ||||||||||||||||||    
T  2192548 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgattggtgattgt 2192628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 369432 - 369390
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  369432 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 369390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 7286309 - 7286350
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  7286309 tatgattggtgattgttcatgatgtatatgattggtgattgt 7286350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 13867778 - 13867864
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    |||||||||||||  | |||||| |||||||||||||   ||||||| | ||||||||||||||| || |||||  |||||||||||||    
T  13867778 tgattgttcatgaaatgtgattgctgattgttcatgaa--atatgattgatgattgttcatgataaatgtgattaatgattgttcatga 13867864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 15952840 - 15952881
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  15952840 tatgattggtgattgttcatgatgtatatgattggtgattgt 15952881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 16480817 - 16480858
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  16480817 tatgattggtgattgttcatgatgtatatgattggtgattgt 16480858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 2436175 - 2436135
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  2436175 atgcatttatgtgtcaataagtgcatatcataacatgagtc 2436135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 18981599 - 18981639
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  18981599 atgcatttatgtgtcaataagtgcataacatagcatgagtc 18981639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 14253054 - 14253093
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  14253054 tgattggtgattgttcatgatgtatatgattggtgattgt 14253093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 14253054 - 14253093
Alignment:
Q  219 tgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  14253054 tgattggtgattgttcatgatgtatatgattggtgattgt 14253093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 123047 - 123005
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  123047 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 123005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 1938395 - 1938437
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  1938395 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 1938437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 2192388 - 2192430
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  2192388 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 2192430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 3893633 - 3893591
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  3893633 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 3893591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 7286172 - 7286282
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgact--tttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattgg 251  Q
    |||||||||||| | |||| |||||||||||||||    | || ||||||||||||||||  | ||||||| | ||||||||||||||| || || ||||    
T  7286172 attgttcatgaaatgtgattaatgattgttcatgataaatgtggttggtgattgttcatg--gaatatgattgatgattgttcatgataaatgtggttgg 7286269  T
Q  252 tgattgttcatga 264  Q
    ||||| |||||||    
T  7286270 tgattattcatga 7286282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 11582564 - 11582606
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||    
T  11582564 atgcatttatgtgtcaataggtgcatatcatggcatgagtctt 11582606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 12753419 - 12753377
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  12753419 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 12753377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 15761985 - 15762027
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||    
T  15761985 atgcatttatgcgtcaataagtgcatatcataacatgagtctt 15762027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 15925833 - 15925799
Alignment:
Q  26 ttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||| |||||||||||||||||||||||||    
T  15925833 ttatgtgtcaataagtgcatatcatagcatgagtc 15925799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 15952712 - 15952754
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  15952712 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 15952754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 18255440 - 18255482
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||    
T  18255440 atgcatttatgagtcaataagtgcatatcataacatgagtctt 18255482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 32496174 - 32496216
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  32496174 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 32496216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 45453881 - 45453923
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  45453881 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 45453923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 2024877 - 2024836
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||| |||||||||||||||| |||||||||| |||||||    
T  2024877 tatgattggtgattgttcatgatgtatatgattgatgattgt 2024836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 11285599 - 11285513
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    |||||||||||||  | |||||  ||||||||||||  | ||||||| | ||||||||||||||| || |||||  |||||||||||||    
T  11285599 tgattgttcatgaaatgtgattaatgattgttcatg--gaatatgattgatgattgttcatgataaatgtgattaatgattgttcatga 11285513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 2024877 - 2024849
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  2024877 tatgattggtgattgttcatgatgtatat 2024849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Original strand, 2192587 - 2192615
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  2192587 tatgattggtgattgttcatgatgtatat 2192615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Original strand, 7286309 - 7286337
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  7286309 tatgattggtgattgttcatgatgtatat 7286337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 7291322 - 7291282
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  7291322 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 7291282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Original strand, 15952840 - 15952868
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  15952840 tatgattggtgattgttcatgatgtatat 15952868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Original strand, 16480817 - 16480845
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  16480817 tatgattggtgattgttcatgatgtatat 16480845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 555 - 455
Alignment:
Q  159 ttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattg 257  Q
    |||||||| |||||| |||||||||||||  ||| |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  555 ttcatgaaatatgattaatgattgttcatcgcttatgattggtgattgttcatgatgtatatgattggtgattgttcatgatgtatatgattggtgattg 456  T
Q  258 t 258  Q
    |    
T  455 t 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 522 - 468
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  522 tatgattggtgattgttcatgatgtatatgattggtgattgttcatgatgtatat 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 622 - 580
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  622 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 64; Significance: 5e-28; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 159 - 265
Target Start/End: Complemental strand, 77897 - 77790
Alignment:
Q  159 ttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattg 257  Q
    |||||||| |||||| |||||||||||||  ||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||  |||||    
T  77897 ttcatgaaatatgattaatgattgttcattgcttatgattggtgattgttcatgatgtatatgattggtgattgttcatgatgtatatgattgaggattg 77798  T
Q  258 ttcatgat 265  Q
    ||||||||    
T  77797 ttcatgat 77790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 77836 - 77765
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    |||||||||||||||||||| ||||||||| |  ||||||||||||||||| |||||||||||||| |||||    
T  77836 tgattggtgattgttcatgatgtatatgattgaggattgttcatgatatatgtgattggtgattgtgcatga 77765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 77864 - 77810
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  77864 tatgattggtgattgttcatgatgtatatgattggtgattgttcatgatgtatat 77810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 36148 - 36062
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    |||||||||||||  | |||||| ||||||||||||  | ||||||| | ||||||||||||||| || |||||  |||||||||||||    
T  36148 tgattgttcatgaaatgtgattgatgattgttcatg--gaatatgattgatgattgttcatgataaatgtgattaatgattgttcatga 36062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 5607 - 5489
Alignment:
Q  139 tatttgtgaattgataattgttcatgaattatgataa-tgattgttcatgactttt--gattggtgattgttcatgaggtatatgatcggtgattgttca 235  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||  | |  ||||||||||||||||||| |||||||||| | |||||||||    
T  5607 tatttgtgaattgataattgttcatgaattatgatcggtgattgttcatgatgtatatgattggtgattgttcatgatgtatatgatcag-gattgttca 5509  T
Q  236 tgatatatatgattggtgat 255  Q
    |||| |||||||||||||||    
T  5508 tgatgtatatgattggtgat 5489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 5591 - 5499
Alignment:
Q  178 attgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    ||||||||||| || |||| ||||||||||||||| ||||||||| |||||||||||||||| ||||||||  | |||||||||||||||||||    
T  5591 attgttcatgaattatgatcggtgattgttcatgatgtatatgattggtgattgttcatgatgtatatgatcag-gattgttcatgatgtatat 5499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 5726 - 5684
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5726 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 5684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 217366 - 217408
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  217366 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 217408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 59; Significance: 5e-25; HSPs: 4)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 149 - 267
Alignment:
Q  148 attgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatg 246  Q
    |||||| ||||| |||||| |||||| ||||||||| |||| ||| |||||| ||||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  149 attgatgattgtccatgaaatatgattaatgattgtgcatggcttatgattgatgattgttcatgatgtatatgattggtgattattcatgatgtatatg 248  T
Q  247 attggtgattgttcatgat 265  Q
    || ||||||| ||||||||    
T  249 atcggtgattattcatgat 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 221 - 286
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||| || ||||||||||||||    
T  221 tgattggtgattattcatgatgtatatgatcggtgattattcatgataaatgtgattggtgattgt 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 193 - 247
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| | |||||||||||||| |||||||||||||||| ||||||||||||||    
T  193 tatgattgatgattgttcatgatgtatatgattggtgattattcatgatgtatat 247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 29 - 71
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  29 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 4582 - 4660
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  4582 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 4660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 4533 - 4647
Alignment:
Q  155 attgttcatgaattatgat--aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggt 252  Q
    |||||||||||| ||||||  |||||||||||||| ||| ||||||||||||||||||||   |||||||   ||||||||||||     ||||||||||    
T  4533 attgttcatgaaatatgattaaatgattgttcatggcttatgattggtgattgttcatga--aatatgattaatgattgttcatg--gcttatgattggt 4628  T
Q  253 gattgttcatgatgtatat 271  Q
    |||||||||||||||||||    
T  4629 gattgttcatgatgtatat 4647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 4580 - 4660
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| |||||||||||||||| ||||||||||||||||||    
T  4580 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgattggtgattgt 4660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 9874 - 9952
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    ||||||||||  ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  9874 attgttcatggcttatgattaatgattgttcatgacttatgattggtgattgttcatgatgtatatgattggtgattgt 9952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 9869 - 9952
Alignment:
Q  173 taatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||||||| ||| |||||  |||||||||||||  |||  ||| |||||||||||||||| ||||||||||||||||||    
T  9869 taatgattgttcatggcttatgattaatgattgttcatgacttat--gattggtgattgttcatgatgtatatgattggtgattgt 9952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Original strand, 9911 - 9939
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  9911 tatgattggtgattgttcatgatgtatat 9939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 49422 - 49500
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  49422 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 49500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 49373 - 49487
Alignment:
Q  155 attgttcatgaattatgat--aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggt 252  Q
    |||||||||||| ||||||  |||||||||||||| ||| ||||||||||||||||||||   |||||||   ||||||||||||     ||||||||||    
T  49373 attgttcatgaaatatgattaaatgattgttcatggcttatgattggtgattgttcatga--aatatgattaatgattgttcatg--gcttatgattggt 49468  T
Q  253 gattgttcatgatgtatat 271  Q
    |||||||||||||||||||    
T  49469 gattgttcatgatgtatat 49487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 49420 - 49500
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| |||||||||||||||| ||||||||||||||||||    
T  49420 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgattggtgattgt 49500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 51; Significance: 3e-20; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 156127 - 156205
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  156127 attgttcatgaaatatgattaatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 156205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 34877 - 34837
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  34877 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 34837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 156125 - 156205
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  ||||||||||||  |  |||||| |||||||||||||||| ||||||||||||||||||    
T  156125 tgattgttcatgaaatatgattaatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgattggtgattgt 156205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 155966 - 156008
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| ||||||||| |||||| ||||||||||    
T  155966 atgcatttatgtgtcaataagtgcagatcataacatgagtctt 156008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Original strand, 156164 - 156192
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  156164 tatgattggtgattgttcatgatgtatat 156192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 31450 - 31385
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||  ||||||||    
T  31450 tgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatatgatcagtgattgt 31385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 31452 - 31398
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  31452 tatgattggtgattgttcatgatgtatatgatcggtgattgttcatgatgtatat 31398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 47; Significance: 7e-18; HSPs: 6)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 17772 - 17694
Alignment:
Q  155 attgttcatgaattatgata-atgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| ||||||  ||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  17772 attgttcatgaaatatgattgatgattgttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 17694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 19797 - 19724
Alignment:
Q  160 tcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    ||||||| |||||| ||||||| |||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  19797 tcatgaaatatgattaatgattcttcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 19724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 17774 - 17694
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||| ||||||||||||  |  |||||| |||||||||||||||| ||||||||||||||||||    
T  17774 tgattgttcatgaaatatgattgatgattgttcatg--gcttatgattggtgattgttcatgatgtatatgattggtgattgt 17694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 19765 - 19724
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  19765 tatgattggtgattgttcatgatgtatatgattggtgattgt 19724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 17781 - 17707
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    ||||||||||||||||||||   ||||||| | ||||||||||||     |||||||||||||||||||||||||||||    
T  17781 tgattggtgattgttcatga--aatatgattgatgattgttcatg--gcttatgattggtgattgttcatgatgtatat 17707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 19765 - 19737
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  19765 tatgattggtgattgttcatgatgtatat 19737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 47; Significance: 7e-18; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 90746 - 90824
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| ||||||| |||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  90746 attgttcatgaaatatgattaatgattattcatggcttatgattggtgattgttcatgatgtatatgattggtgattgt 90824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 128826 - 128782
Alignment:
Q  214 gtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  128826 gtatatgatcggtgattgttcatgatgtatatgattggtgattgt 128782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 128932 - 128890
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  128932 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 128890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 90783 - 90824
Alignment:
Q  217 tatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  90783 tatgattggtgattgttcatgatgtatatgattggtgattgt 90824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Original strand, 90783 - 90811
Alignment:
Q  243 tatgattggtgattgttcatgatgtatat 271  Q
    |||||||||||||||||||||||||||||    
T  90783 tatgattggtgattgttcatgatgtatat 90811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 24879 - 24919
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24879 atgcatttatgtgtccataagtgcatatcatagcatgagtc 24919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 21192 - 21152
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21192 atgcatttatgtgtccataagtgcatatcatagcatgagtc 21152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 25447 - 25407
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25447 atgcatttatgtgtccataagtgcatatcatagcatgagtc 25407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 3189 - 3229
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3189 atgcatttatgtgtccataagtgcatatcatagcatgagtc 3229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 29895 - 29855
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29895 atgcatttatgtgtccataagtgcatatcatagcatgagtc 29855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 21577 - 21655
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| |||||| || ||||||||||| |||  |||||||| |||||||||| ||||||||| |||||||||    
T  21577 attgttcatgaaatatgattaacgattgttcatggcttacgattggtgtttgttcatgatgtatatgattggtgattgt 21655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 17706 - 17746
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  17706 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 17746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 37833 - 37793
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  37833 atgcatttatgtgtcaataagtgcatatcatagcatgagtc 37793  T

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Target: scaffold0138 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 26749 - 26689
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||||||| ||||||||||||||||||||   ||||||| |||||| ||||||||    
T  26749 tgattgttcatgacttatgattggtgattgttcatga--aatatgattggtgatcgttcatga 26689  T

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Target: scaffold0138; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 26756 - 26689
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    ||||||||||||||||||||    |||||| ||||||||||||||  | |||||||||||||| ||||||||    
T  26756 tgattggtgattgttcatga--cttatgattggtgattgttcatg--aaatatgattggtgatcgttcatga 26689  T

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Target: scaffold1560 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 1402 - 1444
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  1402 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 15987 - 15945
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  15987 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 15945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 4385 - 4343
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  4385 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 4343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 14844 - 14802
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  14844 atgcatttatgtgtcaataagtgcatatcatatcatgagtctt 14802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 25762 - 25720
Alignment:
Q  229 ttgttcatgatatatatgattggtgattgttcatgatgtatat 271  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  25762 ttgttcctgatacatatgattggtgattgttcatgatgtatat 25720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 6765 - 6807
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  6765 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 6807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 59052 - 59094
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  59052 atgcatttatgtgtcaataagtgcatatcataacatgagtctt 59094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 2410 - 2487
Alignment:
Q  156 ttgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    ||||| ||||| |||||| |||||||||||||| ||| ||||| |||||||||||||  ||||||||| ||| |||||    
T  2410 ttgtttatgaaatatgattaatgattgttcatggcttatgattagtgattgttcatggtgtatatgattggtaattgt 2487  T

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Target: scaffold0292 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 18037 - 17951
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    |||||||||||||  | |||||  ||||||||||||  | ||||||| | ||||||||||||||| || |||||| |||||||||||||    
T  18037 tgattgttcatgaaatgtgattaatgattgttcatg--gaatatgattgatgattgttcatgataaatgtgattgatgattgttcatga 17951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 51575 - 51534
Alignment:
Q  21 tgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  51575 tgcatttatgtgtcaataagtgcatatcataacatgagtctt 51534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 94605 - 94519
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgttcatga 264  Q
    |||||||||||||  | |||||  ||||||||||||  | ||||||| | ||||||||||||||| ||||||||  |||||||||||||    
T  94605 tgattgttcatgaaatgtgattaatgattgttcatg--gaatatgattgatgattgttcatgataaatatgattaatgattgttcatga 94519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 94675 - 94593
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||||||| | |||| |||||||||||||||  | |||||||||||| |||||||   || |||| |||||||||||||||    
T  94675 attgttcatgaaatgtgattaatgattgttcatgaaatgtgattggtgattattcatga--aatgtgattggtgattgttcatga 94593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 264
Target Start/End: Complemental strand, 94699 - 94593
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtg 253  Q
    |||||||||||| | |||| |||||||||||||||  | |||||  |||||||||||||   || |||| ||||||| ||||||| || |  ||||||||    
T  94699 attgttcatgaaatgtgattaatgattgttcatgaaatgtgattaatgattgttcatgaa--atgtgattggtgattattcatgaaatgt--gattggtg 94604  T
Q  254 attgttcatga 264  Q
    |||||||||||    
T  94603 attgttcatga 94593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 23311 - 23275
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatga 212  Q
    |||||||||||||||| ||||||||||||||||||||    
T  23311 tgattgttcatgacttatgattggtgattgttcatga 23275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 2869 - 2789
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  |||||||||||||   ||||||| |  ||||||||||||||||| ||||||||||||||    
T  2869 tgattgttcatgaaatgtgattaatgattgttcatgaa--atatgattgaggattgttcatgatatatgtgattggtgattgt 2789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 2997 - 2917
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  |||||||||||||   ||||||| |  ||||||||||||||||| ||||||||||||||    
T  2997 tgattgttcatgaaatgtgattaatgattgttcatgaa--atatgattgaggattgttcatgatatatgtgattggtgattgt 2917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 3139 - 3079
Alignment:
Q  196 ttggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||||||   ||||||| | |||||||||||||||||| |||||||| |||||    
T  3139 ttggtgattgttcatgaa--atatgattgatgattgttcatgatatatgtgattggtaattgt 3079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 15897 - 15957
Alignment:
Q  196 ttggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||||||   ||||||| |  ||||||||||||||||| ||||||||||||||    
T  15897 ttggtgattgttcatgaa--atatgattgaggattgttcatgatatatgtgattggtgattgt 15957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 21100 - 21180
Alignment:
Q  176 tgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||  | |||||  |||||||||||||   ||||||| |  ||||||||||||||||| ||||||||||||||    
T  21100 tgattgttcatgaaatgtgattaatgattgttcatgaa--atatgattgaggattgttcatgatatatgtgattggtgattgt 21180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 20989 - 21052
Alignment:
Q  193 tgattggtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||||||||||||   || ||||   |||||||||||||||||| ||||||||||||||    
T  20989 tgattggtgattgttcatgaa--atgtgattaatgattgttcatgatatatgtgattggtgattgt 21052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 100 - 58
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||||||| |||| |||||||||||||||| ||||||||||    
T  100 atgcatttatatgtcaataagtgcatatcataacatgagtctt 58  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 9542 - 9584
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| | |||||||||||||| ||||||||||    
T  9542 atgcatttatgtgtcaaaaagtgcatatcataacatgagtctt 9584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 14215 - 14173
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  14215 atgcatttatgtgtcgataagtgcatatcatgacatgagtctt 14173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 12817 - 12859
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  12817 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 12859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 15566 - 15600
Alignment:
Q  26 ttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||| |||||||||||||||||||||||||    
T  15566 ttatgtgtcaataagtgcatatcatagcatgagtc 15600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 31; Significance: 0.00000002; HSPs: 5)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 32809 - 32851
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  32809 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 32851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 33636 - 33558
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| | |||| || ||||||||||||  | |||||  ||||||||||||| ||||||||| |||||||||    
T  33636 attgttcatgaaatgtgattaacgattgttcatgaaatgtgattaatgattgttcatgatgtatatgattggtgattgt 33558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 33590 - 33558
Alignment:
Q  226 tgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||| ||||||||||||||||||    
T  33590 tgattgttcatgatgtatatgattggtgattgt 33558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 33715 - 33626
Alignment:
Q  148 attgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||| ||||| |||||| | |||| ||||| ||||||||   | |||||||||||||||||||  | ||||||| |||||||||||||||    
T  33715 attgatgattgtccatgaaatgtgattaatgaatgttcatggaatatgattggtgattgttcatg--gaatatgattggtgattgttcatga 33626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 33819 - 33779
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  33819 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 33779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 27111 - 27069
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  27111 atgcatttatgtgtcgataagtgcatatcatgacatgagtctt 27069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 40069 - 40027
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||    
T  40069 atgcatttatgtgtcaataggtgcatatcatggcatgagtctt 40027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 5)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 39208 - 39286
Alignment:
Q  155 attgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgt 232  Q
    |||||||||||| | |||| || ||||||||||||  | |||||  ||||||||||||| ||||||||| |||||||||    
T  39208 attgttcatgaaatgtgattaacgattgttcatgaaatgtgattaatgattgttcatgatgtatatgattggtgattgt 39286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 40035 - 39993
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  40035 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 39993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 39025 - 39065
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  39025 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 39065  T

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Target: scaffold0078; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 39129 - 39218
Alignment:
Q  148 attgataattgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||| ||||| |||||| | |||| ||||| ||||||||   | ||||||||||||||||||  || ||||||| |||||||||||||||    
T  39129 attgatgattgtccatgaaatgtgattaatgaatgttcatggaatatgattggtgattgttcat--ggaatatgattggtgattgttcatga 39218  T

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Target: scaffold0078; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 258
Target Start/End: Original strand, 39254 - 39286
Alignment:
Q  226 tgattgttcatgatatatatgattggtgattgt 258  Q
    |||||||||||||| ||||||||||||||||||    
T  39254 tgattgttcatgatgtatatgattggtgattgt 39286  T

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Target: scaffold0068 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 60111 - 60069
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  60111 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 60069  T

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Target: scaffold0051 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 56476 - 56434
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  56476 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 56434  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 66345 - 66387
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  66345 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 66387  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 106544 - 106502
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||    
T  106544 atgcatttatgagtcaataagtgcatatcataacatgagtctt 106502  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 145075 - 145033
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||| |||||||| ||| |||||||||||||||||||||||    
T  145075 atgcatatatgtgtcaataggtgcatatcatagcatgagtctt 145033  T

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Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 147334 - 147292
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    |||||| |||||||| ||| |||||||||||||||||||||||    
T  147334 atgcatatatgtgtcaataggtgcatatcatagcatgagtctt 147292  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 249167 - 249209
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  249167 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 249209  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 236718 - 236676
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  236718 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 236676  T

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Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 270664 - 270622
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  270664 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 270622  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 129817 - 129859
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtctt 62  Q
    ||||||||||||||| |||||||||||||||  ||||||||||    
T  129817 atgcatttatgtgtcaataagtgcatatcatgacatgagtctt 129859  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 166101 - 166142
Alignment:
Q  197 tggtgattgttcatgaggtatatgatcggtgattgttcatga 238  Q
    |||||||| ||||||||||||||||| | |||||||||||||    
T  166101 tggtgatttttcatgaggtatatgattgctgattgttcatga 166142  T

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Target: scaffold0338 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 7210 - 7153
Alignment:
Q  199 gtgattgttcatgaggtatatgatcggtgattgttcatgatatatatgattggtgattgt 258  Q
    ||||||||||||||   ||||||| |  ||||||||||||||||| ||||||||||||||    
T  7210 gtgattgttcatgaa--atatgattgaggattgttcatgatatatgtgattggtgattgt 7153  T

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Target: scaffold0083 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 12735 - 12695
Alignment:
Q  20 atgcatttatgtgtccataagtgcatatcatagcatgagtc 60  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  12735 atgcatttatgtgtcaataagtgcatatcatgacatgagtc 12695  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 30996 - 30940
Alignment:
Q  157 tgttcatgaattatgat-aatgattgttcatgacttttgattggtgattgttcatga 212  Q
    |||||||||| | |||| |||||||||||||||  | ||||||||||||||||||||    
T  30996 tgttcatgaaatgtgattaatgattgttcatgaaatgtgattggtgattgttcatga 30940  T

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