View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17764_low_13 (Length: 258)
Name: NF17764_low_13
Description: NF17764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17764_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 33966155 - 33965926
Alignment:
| Q |
15 |
caaaggcatcttaggtaaaaacagtttggttcctatgtttccaaatcagccaaaagagacactaaacaattgttgagccaggacattggaggctgatagc |
114 |
Q |
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| T |
33966155 |
caaaggcatcttaggtaaaaacagtttggttcctatgtttccaaatcagccaaaagagacactaaacaattgttgagccaggacattggaggctgatagc |
33966056 |
T |
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| Q |
115 |
caatacaacatccaagtttgaatatccatttgattagtaacatcaatacccaggagggggcattgcataaataattgatcaatatttttcaaagatgtgt |
214 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
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| T |
33966055 |
caatacaacatccaagtttgaatatccatctgattagtaacatcaatacccaggagggggcattgcataaataatttatcaatattttccaaagatgtgt |
33965956 |
T |
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| Q |
215 |
tacaaagaatgcagctcatccaagtaaatg |
244 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
33965955 |
tacaaagaatgcagctcatccaagtaaatg |
33965926 |
T |
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