View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17765_high_7 (Length: 371)
Name: NF17765_high_7
Description: NF17765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17765_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 10 - 352
Target Start/End: Original strand, 37515132 - 37515474
Alignment:
| Q |
10 |
attattctccttagtatagttaccatcacgctttccaatttcaattggataagctgacaggaaaaatatatacatataaacagaacatatatcattatag |
109 |
Q |
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| T |
37515132 |
attattctccttagtatagttaccatcacgctttccaatttcaattggataagctgacaggaaaaatatatacatataaacagaacatatatcattatag |
37515231 |
T |
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| Q |
110 |
accttatttttcaatccaatccactcaaaaacgaatattagacacctaacacattgaaaatgaaaaccaccaacgaatgttcacactatacatcttaacc |
209 |
Q |
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| T |
37515232 |
accttatttttcaatccaatccactcaaaaacgaatattagacacctaacacattgaaaatgaaaaccaccaacgaatgttcacactatacatcttaacc |
37515331 |
T |
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| Q |
210 |
tcttttcaaggaactagtttttccaacatttgatgtagttctaatcctcttcttagcttgtacaataaaatctgaaaaatggtcattatgattttccatc |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37515332 |
tcttttcaaggaactagtttttccaacatttgatgtagttctaatcctcttcttagcttgtacaataaaatctgaaaaatggtcattatgattttccatc |
37515431 |
T |
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| Q |
310 |
ttgttaacataatttgcttcctctagaacatggttgttctgcc |
352 |
Q |
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| T |
37515432 |
ttgttaacataatttgcttcctctagaacatggttgttctgcc |
37515474 |
T |
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